ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1848 good E KOG2797 Amino acid transport and metabolism Prephenate dehydratase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1848 653090 652158 -311
(311 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNL316c [E] KOG2797 Prephenate dehydratase 281 9e-76
SPBC30D10.16 [E] KOG2797 Prephenate dehydratase 97 4e-20
At2g27820 [E] KOG2797 Prephenate dehydratase 95 1e-19
At3g07630 [E] KOG2797 Prephenate dehydratase 93 6e-19
At5g22630 [E] KOG2797 Prephenate dehydratase 92 7e-19
At1g08250 [E] KOG2797 Prephenate dehydratase 92 1e-18
At3g44720 [E] KOG2797 Prephenate dehydratase 91 2e-18
At1g11790 [E] KOG2797 Prephenate dehydratase 89 1e-17
>YNL316c [E] KOG2797 Prephenate dehydratase
Length = 368
Score = 281 bits (719), Expect = 9e-76
Identities = 161/332 (48%), Positives = 209/332 (62%), Gaps = 32/332 (9%)
Query: 3 KVLFLGPVGTYSHQAALQQFPNE---ELIPVTSIPACFEKLISDIDMDYGVVPLENSTNG 59
+VLFLGP GTYSHQAALQQF + E +P SIP CF +L +D +DY VVPLENSTNG
Sbjct: 41 RVLFLGPKGTYSHQAALQQFQSTSDVEYLPAASIPQCFNQLENDTSIDYSVVPLENSTNG 100
Query: 60 QVVFTYDLFRDFM---------QAD---LSPSVEVVGEQYVDIAHCLISPVPL-----SE 102
QVVF+YDL RD M AD ++P +EV+ EQYV I HCLISP+ L S
Sbjct: 101 QVVFSYDLLRDRMIKKALSLPAPADTNRITPDIEVIAEQYVPITHCLISPIQLPNGIASL 160
Query: 103 EQLRKVDVIYSHPQVWGQVKDYLSDLETKYGKTA--KIDCSSTAGAVERCIAEYAT--DR 158
+V +I+SHPQVWGQV+ YL + K+ + ++DCSST+ +V +CI D
Sbjct: 161 GNFEEV-IIHSHPQVWGQVECYLRSMAEKFPQVTFIRLDCSSTSESVNQCIRSSTADCDN 219
Query: 159 KITLAIGSRASASLNKATIVEGGINDVNGNTTRFLILKRRDESSEIGSQALPPKGDEMKV 218
+ LAI S +A L+KA I+E IND GNTTRFL+LKRR+ + G + G ++V
Sbjct: 220 ILHLAIASETAAQLHKAYIIEHSINDKLGNTTRFLVLKRRENA---GDNEVEDTG-LLRV 275
Query: 219 NFVTFVINQDDPGSLIDVLNVLREYKLNMCSISSRPFHNQVQSERKWQYCFFIEFYGNYG 278
N +TF QDDPGSL+DVLN+L+ + LNMCSI+SRPFH + +R W+Y FFIE+Y
Sbjct: 276 NLLTFTTRQDDPGSLVDVLNILKIHSLNMCSINSRPFHLD-EHDRNWRYLFFIEYYTEKN 334
Query: 279 T--DYELLAKRFDENCAKWIHWGKFYRNALYY 308
T + E + + +W WG F RN YY
Sbjct: 335 TPKNKEKFYEDISDKSKQWCLWGTFPRNERYY 366
>SPBC30D10.16 [E] KOG2797 Prephenate dehydratase
Length = 287
Score = 96.7 bits (239), Expect = 4e-20
Identities = 90/327 (27%), Positives = 142/327 (42%), Gaps = 63/327 (19%)
Query: 2 AKVLFLGPVGTYSHQAALQQFPNEELIPVTS-----------IPACFEKLI---SDIDMD 47
+K+ FLGP GT+SHQAAL P+ L + S I CF ++ S +D
Sbjct: 4 SKIAFLGPRGTFSHQAALLARPDSLLCSLPSFAGKLIFALKFILICFLAVLEALSSRQVD 63
Query: 48 YGVVPLENSTNGQVVFTYDLFRDFMQADLSPSVEVVGEQYVDIAHCLISPVPLSEEQLRK 107
Y V+P+ENSTNG V+ YDL + ++ VGE V HC+I + L
Sbjct: 64 YAVLPIENSTNGAVIPAYDLLKG------RDDIQAVGEVLVPAHHCIIG------KSLEN 111
Query: 108 VDVIYSHPQVWGQVKDYLSDLETKYGKTAKIDCSSTAGAVERCIAEYATDRKIT---LAI 164
V I SHPQ +GQ ++S + + +S A A+ + IT +AI
Sbjct: 112 VQKILSHPQAFGQCSKWIS-ANVPNAEFVSVSSTSQAAAL--------ASKDITGTIVAI 162
Query: 165 GSRASASLNKATIVEGGINDVNGNTTRFLILKR---RDESSEIGSQALPPKGDEMKVNFV 221
S A N+ ++ I D + N TRFL+L+ +D+ S + ++L +
Sbjct: 163 SSELCAVENQFNLLVKNIEDDSNNRTRFLLLRSGGFQDDLSPLKEKSL-----------L 211
Query: 222 TFVINQDDPGSLIDVLNVLREYKLNMCSISSRPFHNQVQSERKWQYCFFIEFYGNYGTDY 281
F ++ P L V V +K+ + ++ RP + W Y +F+E G
Sbjct: 212 QFYLSH--PKKLSAVFEVFAAHKVVITNLVVRP-----SCKFPWTYIYFVECLGM----E 260
Query: 282 ELLAKRFDENCAKWIHWGKFYRNALYY 308
+ L R + C + G + Y+
Sbjct: 261 KHLIDRVGKYCDTFTFMGSYTNQISYF 287
>At2g27820 [E] KOG2797 Prephenate dehydratase
Length = 424
Score = 94.7 bits (234), Expect = 1e-19
Identities = 85/282 (30%), Positives = 128/282 (45%), Gaps = 40/282 (14%)
Query: 3 KVLFLGPVGTYSHQAALQQFPNEELIPVTSIPACFEKLISDIDMDYGVVPLENSTNGQVV 62
+V + G G YS AA + +PN + IP F+ + I D V+P+ENS G +
Sbjct: 122 RVAYQGVPGAYSEAAAGKAYPNCQAIPCDQFEVAFQAVELWI-ADRAVLPVENSLGGSIH 180
Query: 63 FTYDLFRDFMQADLSPSVEVVGEQYVDIAHCLISPVPLSEEQLRKVDVIYSHPQVWGQVK 122
YDL L + +VGE + + HCLI+ + +E L +V SHPQ Q +
Sbjct: 181 RNYDLL-------LRHRLHIVGEVQLPVHHCLIALPGVRKEFLTRV---ISHPQGLAQCE 230
Query: 123 DYLSDLETKYGKTAKIDCSSTAGAVERCIAEYATDRKITLAIGSRASASLNKATIVEGGI 182
L+ L + A D TAGA E A D T AI S +A + I+E GI
Sbjct: 231 HTLTKLGLNVAREAVDD---TAGAAEFIAANNIRD---TAAIASARAAEIYGLEILEDGI 284
Query: 183 NDVNGNTTRFLILKRRDESSEIGSQALPPKGDEMKVNFVTFVINQDDPGS--LIDVLNVL 240
D N TRF++L R + + P+ D F T ++ + G+ L VL+
Sbjct: 285 QDDASNVTRFVMLAR---------EPIIPRTDR---PFKTSIVFAHEKGTCVLFKVLSAF 332
Query: 241 REYKLNMCSISSRPFHN---------QVQSERKWQYCFFIEF 273
+++ I SRP HN V + + ++Y F+I+F
Sbjct: 333 AFRNISLTKIESRPNHNVPIRLVDEANVGTAKHFEYMFYIDF 374
>At3g07630 [E] KOG2797 Prephenate dehydratase
Length = 381
Score = 92.8 bits (229), Expect = 6e-19
Identities = 82/298 (27%), Positives = 132/298 (43%), Gaps = 33/298 (11%)
Query: 3 KVLFLGPVGTYSHQAALQQFPNEELIPVTSIPACFEKLISDIDMDYGVVPLENSTNGQVV 62
+V + G G YS AA + +PN E +P FE + + +D V+P+ENS G +
Sbjct: 100 RVAYQGVRGAYSESAAEKAYPNCEAVPCEEFDTAFEAVERWL-VDRAVLPIENSLGGSIH 158
Query: 63 FTYDLFRDFMQADLSPSVEVVGEQYVDIAHCLISPVPLSEEQLRKVDVIYSHPQVWGQVK 122
YDL L ++ +VGE + + HCL++ ++ E LR+V SHPQ Q +
Sbjct: 159 RNYDLL-------LRHNLHIVGEVKLAVRHCLLANHGVNIEDLRRV---LSHPQALAQCE 208
Query: 123 DYLSDLETKYGKTAKIDCSSTAGAVERCIAEYATDRKITLAIGSRASASLNKATIVEGGI 182
+ L TK G + TAGA ++ E D A+ S +A + IV I
Sbjct: 209 NTL----TKLGLVREA-VDDTAGAAKQIAFENLND---AAAVASEKAAKIYGLNIVAKDI 260
Query: 183 NDVNGNTTRFLILKRRDESSEIGSQALPPKGDEMKVNFVTFVINQDDPGSLIDVLNVLRE 242
D N TRFL+L R + + P + + + F + ++ PG L L V
Sbjct: 261 QDDCDNVTRFLMLAR---------EPIIPGTNRLFKTSIVFSL-EEGPGVLFKALAVFAL 310
Query: 243 YKLNMCSISSRPFHNQVQSE----RKWQYCFFIEFYGNYGTDYELLAKRFDENCAKWI 296
++N+ I SRP + + Y F+++F + + A R E A ++
Sbjct: 311 RQINLTKIESRPLRKHPLRASGGLKYFDYLFYVDFEASMADEVAQNALRHLEEFATFL 368
>At5g22630 [E] KOG2797 Prephenate dehydratase
Length = 425
Score = 92.4 bits (228), Expect = 7e-19
Identities = 80/280 (28%), Positives = 118/280 (41%), Gaps = 34/280 (12%)
Query: 3 KVLFLGPVGTYSHQAALQQFPNEELIPVTSIPACFEKLISDIDMDYGVVPLENSTNGQVV 62
+V + G G YS AA + +PN E IP F+ + I D V+P+ENS G +
Sbjct: 127 RVAYQGVPGAYSEAAAGKAYPNSEAIPCDQFDVAFQAVELWI-ADRAVLPVENSLGGSIH 185
Query: 63 FTYDLFRDFMQADLSPSVEVVGEQYVDIAHCLISPVPLSEEQLRKVDVIYSHPQVWGQVK 122
YDL L + +VGE + + HCL++ + + + +V SHPQ Q +
Sbjct: 186 RNYDLL-------LRHRLHIVGEVQIPVHHCLLALPGVRTDCITRV---ISHPQALAQTE 235
Query: 123 DYLSDLETKYGKTAKIDCSSTAGAVERCIAEYATDRKITLAIGSRASASLNKATIVEGGI 182
L+ L K A D TA A E A D T A+ S +A L I+ GI
Sbjct: 236 GSLNKLTPKAAIEAFHD---TAAAAEYIAANNLHD---TAAVASARAAELYGLQILADGI 289
Query: 183 NDVNGNTTRFLILKRRDESSEIGSQALPPKGDEMKVNFVTFVINQDDPGSLIDVLNVLRE 242
D GN TRFL+L R +P K + V L VL+
Sbjct: 290 QDDAGNVTRFLMLAR--------DPIIPRTDRPFKTSIVFAAQEHKGTSVLFKVLSAFAF 341
Query: 243 YKLNMCSISSRPFHN---------QVQSERKWQYCFFIEF 273
+++ I SRP N V + + ++Y F+++F
Sbjct: 342 RNISLTKIESRPHQNCPVRVVGDENVGTSKHFEYTFYVDF 381
>At1g08250 [E] KOG2797 Prephenate dehydratase
Length = 413
Score = 92.0 bits (227), Expect = 1e-18
Identities = 82/282 (29%), Positives = 129/282 (45%), Gaps = 40/282 (14%)
Query: 3 KVLFLGPVGTYSHQAALQQFPNEELIPVTSIPACFEKLISDIDMDYGVVPLENSTNGQVV 62
+V + G G YS AA + +PN + IP F+ + I D V+P+ENS G +
Sbjct: 117 RVAYQGVPGAYSEAAAGKAYPNCQAIPCDQFEVAFQAVELWI-ADRAVLPVENSLGGSIH 175
Query: 63 FTYDLFRDFMQADLSPSVEVVGEQYVDIAHCLISPVPLSEEQLRKVDVIYSHPQVWGQVK 122
YDL L + +VGE + + HCL++ + +E L +V SHPQ Q +
Sbjct: 176 RNYDLL-------LRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRV---ISHPQGLAQCE 225
Query: 123 DYLSDLETKYGKTAKIDCSSTAGAVERCIAEYATDRKITLAIGSRASASLNKATIVEGGI 182
L+ L + A D TAGA E + D T AI S +A + I+E GI
Sbjct: 226 HTLTKLGLNVAREAVDD---TAGAAEFIASNNLRD---TAAIASARAAEIYGLEILEDGI 279
Query: 183 NDVNGNTTRFLILKRRDESSEIGSQALPPKGDEMKVNFVTFVINQDDPGS--LIDVLNVL 240
D N TRF++L R + + P+ D F T ++ + G+ L VL+
Sbjct: 280 QDDVSNVTRFVMLAR---------EPIIPRTDR---PFKTSIVFAHEKGTSVLFKVLSAF 327
Query: 241 REYKLNMCSISSRPFHNQ---------VQSERKWQYCFFIEF 273
+++ I SRP HN+ V + + ++Y F+++F
Sbjct: 328 AFRDISLTKIESRPNHNRPIRVVDDANVGTAKHFEYMFYVDF 369
>At3g44720 [E] KOG2797 Prephenate dehydratase
Length = 424
Score = 90.9 bits (224), Expect = 2e-18
Identities = 77/281 (27%), Positives = 121/281 (42%), Gaps = 36/281 (12%)
Query: 3 KVLFLGPVGTYSHQAALQQFPNEELIPVTSIPACFEKLISDIDMDYGVVPLENSTNGQVV 62
+V + G G YS AA + +PN + IP F+ + I D V+P+ENS G +
Sbjct: 126 RVAYQGVPGAYSEAAAGKAYPNCDAIPCDQFDVAFQAVELWI-ADRAVLPVENSLGGSIH 184
Query: 63 FTYDLFRDFMQADLSPSVEVVGEQYVDIAHCLISPVPLSEEQLRKVDVIYSHPQVWGQVK 122
YDL L + +VGE + + HCL++ L + V + SHPQ Q +
Sbjct: 185 RNYDLL-------LRHRLHIVGEVQIPVHHCLLA---LPGVRTDCVSRVISHPQALAQTE 234
Query: 123 DYLSDLETKYGKTAKIDCSSTAGAVERCIAEYATDRKITLAIGSRASASLNKATIVEGGI 182
L L + A D ++ A + A D T A+ S +A L I+ GI
Sbjct: 235 HSLDVLTPHAAREAFHDTAAAAEYIS------ANDLHDTAAVASARAAELYNLQILADGI 288
Query: 183 NDVNGNTTRFLILKRRDESSEIGSQALPPKGDEMKVNFVTFVINQDDPGS-LIDVLNVLR 241
D GN TRFL+L R + + P+ D + F + S L VL+
Sbjct: 289 QDDPGNVTRFLMLAR---------EPIIPRTDRPFKTSIVFAAQEHKGTSVLFKVLSAFA 339
Query: 242 EYKLNMCSISSRPFHNQ---------VQSERKWQYCFFIEF 273
+++ I SRP HN+ + + ++Y F+++F
Sbjct: 340 FRDISLTKIESRPHHNRPLRVVGDGSFGTSKNFEYMFYVDF 380
>At1g11790 [E] KOG2797 Prephenate dehydratase
Length = 392
Score = 88.6 bits (218), Expect = 1e-17
Identities = 77/280 (27%), Positives = 124/280 (43%), Gaps = 38/280 (13%)
Query: 3 KVLFLGPVGTYSHQAALQQFPNEELIPVTSIPACFEKLISDIDMDYGVVPLENSTNGQVV 62
++ F G G YS AAL+ FPN E +P A F+ + + +D V+P+ENS G +
Sbjct: 107 RISFQGIPGAYSETAALKAFPNCETVPCEQFEAAFQAVELWL-VDKAVLPIENSVGGSIH 165
Query: 63 FTYDLFRDFMQADLSPSVEVVGEQYVDIAHCLISPVPLSEEQLRKVDVIYSHPQVWGQVK 122
YDL L + +V E ++ + HCL+ + +E ++ + SHPQ Q
Sbjct: 166 RNYDLL-------LRHRLHIVQEVHLPVNHCLLGVPGVKKEDIK---CVLSHPQALDQCV 215
Query: 123 DYLSDLETKYGKTAKIDCSSTAGAVERCIAEYATDRKITLAIGSRASASLNKATIVEGGI 182
+ L++L + +I TA A + + D AI S +A++ I+ I
Sbjct: 216 NSLNNLGIQ-----RISAKDTATAAQTVSSSGKID---VGAIASVRAANIYGLDILAENI 267
Query: 183 NDVNGNTTRFLILKRRDESSEIGSQALPPKGDEMKVNFVTFVINQDDPGSLIDVLNVLRE 242
D N TRFLIL R + + P+ D + F + ++ PG L L V
Sbjct: 268 QDDVNNVTRFLILAR---------EPMIPRTDRPYKTSIVFSL-EEGPGVLFKALAVFAL 317
Query: 243 YKLNMCSISSRPFHNQV---------QSERKWQYCFFIEF 273
+N+ I SRP + S + + Y F+I+F
Sbjct: 318 RSINLSKIESRPQRRRPLRVVDGSNNGSAKYFDYLFYIDF 357
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.137 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,225,958
Number of Sequences: 60738
Number of extensions: 827593
Number of successful extensions: 1828
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1794
Number of HSP's gapped (non-prelim): 8
length of query: 311
length of database: 30,389,216
effective HSP length: 106
effective length of query: 205
effective length of database: 23,950,988
effective search space: 4909952540
effective search space used: 4909952540
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)