ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV1916 good T KOG2322 Signal transduction mechanisms N-methyl-D-aspartate receptor glutamate-binding subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV1916 678442 677693 -250
(250 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YNL305c [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bind... 207 1e-53
SPCC576.04 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-b... 115 8e-26
Hs7706335 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bi... 102 7e-22
7303388 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bind... 89 6e-18
7303389 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bind... 89 8e-18
Hs22059607 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-b... 84 1e-16
At4g02690 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bi... 80 4e-15
At1g03070 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bi... 78 1e-14
At3g63310 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bi... 72 6e-13
7299851 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bind... 71 1e-12
Hs20550598 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-b... 68 1e-11
Hs6912468 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bi... 67 3e-11
Hs11545898 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-b... 66 5e-11
CE05851 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-bind... 61 1e-09
>YNL305c [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 297
Score = 207 bits (527), Expect = 1e-53
Identities = 114/269 (42%), Positives = 163/269 (60%), Gaps = 25/269 (9%)
Query: 7 FVPEDFKYSTSVSSCENEIRLGFLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIITKPW 66
F+PEDFKYST V SCE IR F+ VYS+L QL + +F + + LQ FI++
Sbjct: 28 FIPEDFKYSTVVISCEPIIRQRFMHKVYSLLSCQLLASLSFCYWASVSTSLQNFIMSHIA 87
Query: 67 LSFIAIFIGLVTCIWLSFAPSSTDEENE--------------------PWYVLS-FPQQL 105
L +I + + LV+CIWL+ +P D E PWYVLS + Q+L
Sbjct: 88 LFYICMVVSLVSCIWLAVSPRPEDYEASVPEPLLTGSSEEPAQEQRRLPWYVLSSYKQKL 147
Query: 106 ALLILFTMAEAYSLSIVVVIYKGEVILNAVMMTLFVVIGITSTLLSTNYFQIYDFQ-KWY 164
LL +FT++EAY LS+V + Y + +L+A+++T VV+G++ T LS + + + Y
Sbjct: 148 TLLSIFTLSEAYCLSLVTLAYDKDTVLSALLITTIVVVGVSLTALSERFENVLNSATSIY 207
Query: 165 YWLNMFLWVMXXXXXXXXXXHFDTNT---DLLMSWVGVILFTVYIFVDTQLILRKVLVGE 221
YWLN LW+M ++T++ +LL W+G ILFT Y+F+DTQLI RKV E
Sbjct: 208 YWLNWGLWIMIGMGLTALLFGWNTHSSKFNLLYGWLGAILFTAYLFIDTQLIFRKVYPDE 267
Query: 222 EIKCAMMLYLDIINLFLYILRIMSRNQDD 250
E++CAMMLYLDI+NLFL ILRI++ + DD
Sbjct: 268 EVRCAMMLYLDIVNLFLSILRILANSNDD 296
>SPCC576.04 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 266
Score = 115 bits (287), Expect = 8e-26
Identities = 73/241 (30%), Positives = 111/241 (45%), Gaps = 16/241 (6%)
Query: 10 EDFKYSTSVSSCENEIRLGFLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIITKPWLSF 69
+ FK +T V+ C IR+ FL+ VY+IL QL +T FG Y P ++ PW
Sbjct: 39 DQFKNTTPVAECAKSIRMAFLRKVYAILTAQLFVTSLFGGIFYLHPAFSFWVQMHPWFLI 98
Query: 70 IAIFIGLVTCIWLSFAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYKGE 129
+ FI LV L P S+P+ L LFT E +L + +
Sbjct: 99 LNFFISLVVLFGLIMKP------------YSYPRNYIFLFLFTALEGLTLGTAITFFSAR 146
Query: 130 VILNAVMMTLFVVIGITSTLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXXXXHFDTN 189
+IL AV +TL V + +T+ + +DF + +L + LW +
Sbjct: 147 IILEAVFITLGVFVALTAFTFQSK----WDFSRLGGFLYVSLWSLILTPLIFFFVPSTPF 202
Query: 190 TDLLMSWVGVILFTVYIFVDTQLILRKVLVGEEIKCAMMLYLDIINLFLYILRIMSRNQD 249
D+ + G ++F YI DT IL + E I ++MLYLD INLF+ IL+I+ Q+
Sbjct: 203 IDMAFAGFGTLVFCGYILFDTYNILHRYSPEEFIMSSLMLYLDFINLFIRILQILGMLQN 262
Query: 250 D 250
+
Sbjct: 263 N 263
>Hs7706335 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 258
Score = 102 bits (253), Expect = 7e-22
Identities = 72/237 (30%), Positives = 117/237 (48%), Gaps = 17/237 (7%)
Query: 8 VPEDFKYSTSVSSCENEIRLGFLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIITKPWL 67
+ +DF Y +SV+S IR+ FL+ VYSIL Q+ LT ++ F+ P L
Sbjct: 33 IEDDFNYGSSVASATVHIRMAFLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPAL 92
Query: 68 SFIAIFIGLVTCIWLSFAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYK 127
I + + + L FA + + +P L LL FT+ EA ++++VV Y
Sbjct: 93 ----ILLFALGSLGLIFALTLNRHK--------YPLNLYLLFGFTLLEALTVAVVVTFYD 140
Query: 128 GEVILNAVMMTLFVVIGITSTLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXXXXHFD 187
+IL A ++T V G+T L + DF K+ L LW++ + +
Sbjct: 141 VYIILQAFILTTTVFFGLTVYTLQSKK----DFSKFGAGLFALLWILCLSGFLKFFFYSE 196
Query: 188 TNTDLLMSWVGVILFTVYIFVDTQLILRKVLVGEEIKCAMMLYLDIINLFLYILRIM 244
+L+++ G +LF +I DT ++ K+ E + A+ LYLDIINLFL++LR +
Sbjct: 197 I-MELVLAAAGALLFCGFIIYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFL 252
>7303388 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 324
Score = 89.0 bits (219), Expect = 6e-18
Identities = 74/247 (29%), Positives = 119/247 (47%), Gaps = 27/247 (10%)
Query: 9 PEDFKYSTSVSSCENEIRLGFLKNVYSILLFQLTLTF-AFGLYVYNTPGLQLFIITKPWL 67
P++F + + IR GF++ VY IL+ QL +TF A L+VY+ G + F WL
Sbjct: 99 PKNFSFD------DQSIRRGFIRKVYLILMGQLIVTFGAVALFVYHE-GTKTFARNNMWL 151
Query: 68 SFIAIFIGLVTCIWLSFAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYK 127
++A+ + LVT + ++ S + P L LFT A+++ + + Y
Sbjct: 152 FWVALGVMLVTMLSMACCESVRRQT---------PTNFIFLGLFTAAQSFLMGVSATKYA 202
Query: 128 GEVILNAVMMTLFVVIGITSTLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXXXXHFD 187
+ +L AV +T V + +T L T Y DF L + V
Sbjct: 203 PKEVLMAVGITAAVCLALTIFALQTKY----DFTMMGGILIACMVVFLIFGIVAIFVKGK 258
Query: 188 TNTDLLMSWVGVILFTVYIFVDTQLILR-----KVLVGEEIKCAMMLYLDIINLFLYILR 242
T L+ + +G +LF+VY+ DTQL++ + E I A+ LYLDIIN+F+YIL
Sbjct: 259 IIT-LVYASIGALLFSVYLIYDTQLMMGGEHKYSISPEEYIFAALNLYLDIINIFMYILT 317
Query: 243 IMSRNQD 249
I+ ++D
Sbjct: 318 IIGASRD 324
>7303389 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 239
Score = 88.6 bits (218), Expect = 8e-18
Identities = 77/244 (31%), Positives = 117/244 (47%), Gaps = 21/244 (8%)
Query: 11 DFKYSTSVSSCENEIRLGFLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIITKPWLSFI 70
D + S + + IR GF++ VY IL+ QL +TF F + Q ++ P L +I
Sbjct: 10 DAEADKSFAFDDQSIRKGFIRKVYLILMCQLLITFGFVSVFTFSKASQEWVQKNPALFWI 69
Query: 71 AIFIGLVTCIWLSFAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYKGEV 130
A+ + +VT I ++ S + P L LFT+AE++ L +V ++ +
Sbjct: 70 ALAVLIVTMICMACCESVRRKT---------PLNFIFLFLFTVAESFLLGMVAGQFEADE 120
Query: 131 ILNAVMMTLFVVIGITSTLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXXXXHFDTNT 190
+L AV +T V +G+T L T YDF L L V
Sbjct: 121 VLMAVGITAAVALGLTLFALQTK----YDFTMCGGVLVACLVVFIIFGIIAIFIPGKV-I 175
Query: 191 DLLMSWVGVILFTVYIFVDTQLIL-----RKVLVGEEIKCAMMLYLDIINLFLYILRI-- 243
L+ + +G +LF+VY+ DTQL+L + E I A+ LYLDIIN+F+YIL I
Sbjct: 176 GLVYASLGALLFSVYLVYDTQLMLGGNHKYSISPEEYIFAALNLYLDIINIFMYILTIIG 235
Query: 244 MSRN 247
+SRN
Sbjct: 236 LSRN 239
>Hs22059607 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 285
Score = 84.3 bits (207), Expect = 1e-16
Identities = 63/218 (28%), Positives = 103/218 (46%), Gaps = 21/218 (9%)
Query: 29 FLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIITKPWLSFIAIF--IGLVTCIWLSFAP 86
FL+ VYSIL Q+ LT ++ F+ P L + +GL+ + L+
Sbjct: 81 FLRKVYSILSLQVLLTTVTSTVFLYFESVRTFVHESPALILLFALGSLGLIFALILNRH- 139
Query: 87 SSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYKGEVILNAVMMTLFVVIGIT 146
+P L LL FT+ EA ++++VV Y +IL A ++T V G+T
Sbjct: 140 -------------KYPLNLYLLFGFTLLEALTVAVVVTFYDVYIILQAFILTTTVFFGLT 186
Query: 147 STLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXXXXHFDTNTDLLMSWVGVILFTVYI 206
L + DF K+ L LW++ + + +L+++ G +LF +I
Sbjct: 187 VYTLQSKK----DFSKFGAGLFALLWILCLSGFLKFFFYSEI-MELVLAAAGALLFCGFI 241
Query: 207 FVDTQLILRKVLVGEEIKCAMMLYLDIINLFLYILRIM 244
DT ++ K+ E + A+ LYLDIINLFL++LR +
Sbjct: 242 IYDTHSLMHKLSPEEYVLAAISLYLDIINLFLHLLRFL 279
>At4g02690 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 248
Score = 79.7 bits (195), Expect = 4e-15
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 12/222 (5%)
Query: 24 EIRLGFLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIITKPWLSFIAIFIGLVTCIWLS 83
E+R GF++ VYSI+ FQL T A V + LF T +A++I ++ +
Sbjct: 33 ELRWGFIRKVYSIIAFQLLATVAVAATVVTVRPIALFFATTGL--GLALYIVIIITPLIV 90
Query: 84 FAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYKGEVILNAVMMTLFVVI 143
P +Y P LL +FT+A A+ + + G+VIL +V++T VV+
Sbjct: 91 LCPLY-------YYHQKHPVNYLLLGIFTLALAFVVGLTCAFTNGKVILESVILTSVVVL 143
Query: 144 GITS-TLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXXXXHFDTNTDLLMSWVGVILF 202
+T T + + YDF +L L V+ + ++ + I+F
Sbjct: 144 SLTLYTFWAAR--KGYDFNFLGPFLFGALTVLIFFALIQILFPLGRVSVMIYGCLVSIIF 201
Query: 203 TVYIFVDTQLILRKVLVGEEIKCAMMLYLDIINLFLYILRIM 244
YI DT ++++ E I A+ LYLDIINLFLY+L ++
Sbjct: 202 CGYIVYDTDNLIKRHTYDEYIWAAVSLYLDIINLFLYLLTVL 243
>At1g03070 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 247
Score = 77.8 bits (190), Expect = 1e-14
Identities = 65/221 (29%), Positives = 104/221 (46%), Gaps = 12/221 (5%)
Query: 24 EIRLGFLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIITKPWLSFIAIFIGLVTCIWLS 83
E+R GF++ VYSI+ FQL T A V + +F T + +A++I L+ +
Sbjct: 33 ELRWGFIRKVYSIIAFQLLATIAVASTVVFVRPIAVFFATTS--AGLALWIVLIITPLIV 90
Query: 84 FAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYKGEVILNAVMMTLFVVI 143
P +Y P LL +FT+A A+++ + G+VIL A ++T VV+
Sbjct: 91 MCPLY-------YYHQKHPVNYLLLGIFTVALAFAVGLTCAFTSGKVILEAAILTTVVVL 143
Query: 144 GITS-TLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXXXXHFDTNTDLLMSWVGVILF 202
+T T + + YDF +L L V+ + ++ + I+F
Sbjct: 144 SLTVYTFWAAK--KGYDFNFLGPFLFGALIVLMVFALIQIFFPLGRISVMIYGCLAAIIF 201
Query: 203 TVYIFVDTQLILRKVLVGEEIKCAMMLYLDIINLFLYILRI 243
YI DT ++++ E I A+ LYLDIINLFL +L I
Sbjct: 202 CGYIVYDTDNLIKRYSYDEYIWAAVSLYLDIINLFLALLTI 242
>At3g63310 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 239
Score = 72.4 bits (176), Expect = 6e-13
Identities = 61/226 (26%), Positives = 104/226 (45%), Gaps = 20/226 (8%)
Query: 24 EIRLGFLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIITKPWLSFIAIFIGLVTCIWLS 83
E+R F++ VYSI+ QL +T A V + +F T + A++I L+ +
Sbjct: 24 ELRWSFIRKVYSIISIQLLVTIAVAATVVKVHSISVFFTTTT--AGFALYILLILTPLIV 81
Query: 84 FAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYKGEVILNAVMMTLFVVI 143
P +Y P LL +FT+A A+++ + G+VIL +V++T VVI
Sbjct: 82 MCPLY-------YYHQKHPVNYLLLGIFTVALAFAVGLTCAFTSGKVILESVILTAVVVI 134
Query: 144 GITS-TLLSTNYFQIYDFQKWYYWLNMFLW----VMXXXXXXXXXXHFDTNTDLLMSWVG 198
+T T + ++F L FL+ V+ + ++ +
Sbjct: 135 SLTLYTFWAAKRGHDFNF------LGPFLFGAVIVLMVFSFIQILFPLGKISVMIYGCLA 188
Query: 199 VILFTVYIFVDTQLILRKVLVGEEIKCAMMLYLDIINLFLYILRIM 244
I+F YI DT ++++ E I A+ LYLD+INLFL +L ++
Sbjct: 189 SIIFCGYIVYDTDNLIKRHSYDEYIWAAVSLYLDVINLFLSLLTLL 234
>7299851 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 264
Score = 71.2 bits (173), Expect = 1e-12
Identities = 61/229 (26%), Positives = 103/229 (44%), Gaps = 19/229 (8%)
Query: 21 CENEIRLGFLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIITKPWLSFIAIFIGLVTCI 80
C IR GF++ VY ILL QL + + + ++L + W+ +AI I + + +
Sbjct: 46 CSASIRRGFIRKVYLILLAQLITSLVVIVSLTADKRVRLMVAESTWIFVVAILIVVFSLV 105
Query: 81 WLSFAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYKGEVILNAVMMTLF 140
L + D + P L FT+AE++ L + Y I AV++T
Sbjct: 106 ALG---CNEDLRRQT------PANFIFLSAFTIAESFLLGVAACRYAPMEIFMAVLITAS 156
Query: 141 VVIGITSTLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXXXXHFDTNTDLLMSWVGVI 200
V +G+T L T YDF L L ++ T + S + +
Sbjct: 157 VCLGLTLFALQTR----YDFTVMGGLLVSCLIILLFFGIVTIFVGGHMVTTIYAS-LSAL 211
Query: 201 LFTVYIFVDTQLIL-----RKVLVGEEIKCAMMLYLDIINLFLYILRIM 244
LF+VY+ DTQL++ + E I A+ +Y+D++N+FL IL+++
Sbjct: 212 LFSVYLVYDTQLMMGGKHRYSISPEEYIFAALNIYMDVMNIFLDILQLI 260
>Hs20550598 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 316
Score = 67.8 bits (164), Expect = 1e-11
Identities = 65/251 (25%), Positives = 115/251 (44%), Gaps = 22/251 (8%)
Query: 7 FVPEDFKYSTSVSSCENEIRLGFLKNVYSILLFQLTLTFA-FGLYVYNTPGLQLFIITKP 65
F D + T+ S + ++R F++ VY+ILL QL +T A L+ + P ++ ++ P
Sbjct: 80 FPTGDHELFTTFSWDDQKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDP-VKDYVQANP 138
Query: 66 ---WLSFIAIFIGLVTCIWLSFAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIV 122
W S+ F +L+ A S + PW L LL +FT++ AY ++
Sbjct: 139 GWYWASYAVFF-----ATYLTLACCSGPRRHFPW-------NLILLTVFTLSMAYLTGML 186
Query: 123 VVIYKGEVILNAVMMTLFVVIGITSTLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXX 182
Y +L + +T V + +T T F Q + L M L+
Sbjct: 187 SSYYNTTSVLLCLGITALVCLSVTVFSFQTK-FDFTSCQGVLFVLLMTLFFSGLILAILL 245
Query: 183 XXHFDTNTDLLMSWVGVILFTVYIFVDTQLIL---RKVLVGEE-IKCAMMLYLDIINLFL 238
+ + + +G +FT+++ +DTQL++ R L EE I A+ +YLDII +F
Sbjct: 246 PFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNRRHSLSPEEYIFGALNIYLDIIYIFT 305
Query: 239 YILRIMSRNQD 249
+ L++ N++
Sbjct: 306 FFLQLFGTNRE 316
>Hs6912468 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 316
Score = 66.6 bits (161), Expect = 3e-11
Identities = 66/251 (26%), Positives = 111/251 (43%), Gaps = 22/251 (8%)
Query: 7 FVPEDFKYSTSVSSCENEIRLGFLKNVYSILLFQLTLTFA-FGLYVYNTPGLQLFIITKP 65
F PE S + ++R F++ VY+ILL QL +T A L+ + P Q +P
Sbjct: 80 FPPETMSSSPLSAGMTKKVRRVFVRKVYTILLIQLLVTLAVVALFTFCDP-CQGLCSGQP 138
Query: 66 ---WLSFIAIFIGLVTCIWLSFAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIV 122
W S+ F +L+ A S + PW L LL +FT++ AY ++
Sbjct: 139 GWYWASYAVFF-----ATYLTLACCSGPRRHFPW-------NLILLTVFTLSMAYLTGML 186
Query: 123 VVIYKGEVILNAVMMTLFVVIGITSTLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXX 182
Y +L + +T V + +T T F Q + L M L+
Sbjct: 187 SSYYNTTSVLLCLGITALVCLSVTVFSFQTK-FDFTSCQGVLFVLLMTLFFSGLILAILL 245
Query: 183 XXHFDTNTDLLMSWVGVILFTVYIFVDTQLIL---RKVLVGEE-IKCAMMLYLDIINLFL 238
+ + + +G +FT+++ +DTQL++ R L EE I A+ +YLDII +F
Sbjct: 246 PFQYVPWLHAVYAALGAGVFTLFLALDTQLLMGNRRHSLSPEEYIFGALNIYLDIIYIFT 305
Query: 239 YILRIMSRNQD 249
+ L++ N++
Sbjct: 306 FFLQLFGTNRE 316
>Hs11545898 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 311
Score = 65.9 bits (159), Expect = 5e-11
Identities = 58/231 (25%), Positives = 108/231 (46%), Gaps = 22/231 (9%)
Query: 22 ENEIRLGFLKNVYSILLFQLTLTFAF-GLYVYNTPGLQLFIITKPWLSFIAIFIGLVTCI 80
+ ++R F++ VYSI+ QL +T A ++ + P + F+ + +++ + +VT
Sbjct: 91 DRKVRHTFIRKVYSIISVQLLITVAIIAIFTFVEP-VSAFVRRNVAVYYVSYAVFVVT-- 147
Query: 81 WLSFAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVVVIYKGEVILNAVMMTLF 140
+L A PW ++ LL LFT A + + +Y+ + ++ A+++T
Sbjct: 148 YLILACCQGPRRRFPWNII-------LLTLFTFAMGFMTGTISSMYQTKAVIIAMIITAV 200
Query: 141 VVIGITSTLLSTNYFQIYDFQK---WYYWLNMFLWVMXXXXXXXXXXHFDTNTDLLMSWV 197
V I +T T DF + L + L V + +L + +
Sbjct: 201 VSISVTIFCFQTK----VDFTSCTGLFCVLGIVLLVTGIVTSIVLYFQYVYWLHMLYAAL 256
Query: 198 GVILFTVYIFVDTQLIL--RKVLVGEE--IKCAMMLYLDIINLFLYILRIM 244
G I FT+++ DTQL+L RK + E I A+ +Y DII +F ++L++M
Sbjct: 257 GAICFTLFLAYDTQLVLGNRKHTISPEDYITGALQIYTDIIYIFTFVLQLM 307
>CE05851 [T] KOG2322 N-methyl-D-aspartate receptor glutamate-binding subunit
Length = 244
Score = 61.2 bits (147), Expect = 1e-09
Identities = 61/249 (24%), Positives = 103/249 (40%), Gaps = 16/249 (6%)
Query: 4 TTPFVPEDFKYSTSVSSCENEIRLGFLKNVYSILLFQLTLTFAFGLYVYNTPGLQLFIIT 63
TT D KY+ SS +R F++ V+ ++ +T AF + + Q ++
Sbjct: 8 TTAQDDPDGKYNLHFSS--QTVRAAFVRKVFMLVTIMFAITAAFCVIPMVSEPFQDWVKN 65
Query: 64 KPWLSFIAIFIGLVTCIWLSFAPSSTDEENEPWYVLSFPQQLALLILFTMAEAYSLSIVV 123
W+ FIAI + LV I LS + + FP + LL +FT++ A V
Sbjct: 66 NFWVYFIAIIVFLVVAIALSCCGNLRRQ---------FPVNIILLTIFTLSAAVMTMFVT 116
Query: 124 VIYKGEVILNAVMMTLFVVIGITSTLLSTNYFQIYDFQKWYYWLNMFLWVMXXXXXXXXX 183
Y + +L + +T V G + + L+M L+
Sbjct: 117 ACYNVQSVLICLCITT-VCSGSVIIFSMKTKSDLTSKMGIAFMLSMVLFSFGIFALIFTL 175
Query: 184 XHFDTNTDLLMSWVGVILFTVYIFVDTQLIL--RKVLVGEE--IKCAMMLYLDIINLFLY 239
+ S + +L Y+ +D QL++ RK + E I AM ++LDI+N+FL
Sbjct: 176 AFNWQFLYSVYSGLAALLMMFYLAIDVQLLMGGRKYELSPEDYIFAAMEIFLDILNIFLM 235
Query: 240 ILRIMSRNQ 248
+L I R +
Sbjct: 236 LLNIFGRGR 244
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.330 0.143 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,588,321
Number of Sequences: 60738
Number of extensions: 514194
Number of successful extensions: 1423
Number of sequences better than 1.0e-05: 14
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1387
Number of HSP's gapped (non-prelim): 17
length of query: 250
length of database: 30,389,216
effective HSP length: 104
effective length of query: 146
effective length of database: 24,072,464
effective search space: 3514579744
effective search space used: 3514579744
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)