ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV2112    suspect: LH   S     KOG3808  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV2112 744741 744526 -72  
         (72 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

7293589 [S] KOG3808 Uncharacterized conserved protein                  85   2e-17

>7293589 [S] KOG3808 Uncharacterized conserved protein
          Length = 74

 Score = 84.7 bits (208), Expect = 2e-17
 Identities = 41/65 (63%), Positives = 49/65 (75%), Gaps = 1/65 (1%)

Query: 2  SALFNFKSLLQVILLFICSCTYIHAQRPSLLDRYKDSGILGVFWKFARIGERASPYVSLA 61
          SALFNF SLL VILL IC+C Y+ +  PSL+DR K +G +G FWK ARIGER SP+V  A
Sbjct: 4  SALFNFHSLLSVILLLICTCAYLRSLFPSLIDRNK-TGFMGTFWKLARIGERKSPWVGAA 62

Query: 62 CIAMA 66
          C+ MA
Sbjct: 63 CLIMA 67


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.332    0.140    0.433 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,777,565
Number of Sequences: 60738
Number of extensions: 114026
Number of successful extensions: 314
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 312
Number of HSP's gapped (non-prelim): 1
length of query: 72
length of database: 30,389,216
effective HSP length: 48
effective length of query: 24
effective length of database: 27,473,792
effective search space: 659371008
effective search space used: 659371008
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (22.0 bits)