ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2279 good P KOG3413 Inorganic ion transport and metabolism Mitochondrial matrix protein frataxin, involved in Fe/S protein biosynthesis
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2279 788296 788865 190
(190 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL120w [P] KOG3413 Mitochondrial matrix protein frataxin involv... 164 9e-41
CE19476 [P] KOG3413 Mitochondrial matrix protein frataxin involv... 86 4e-17
Hs4503785 [P] KOG3413 Mitochondrial matrix protein frataxin invo... 85 7e-17
SPCC1183.03c [P] KOG3413 Mitochondrial matrix protein frataxin i... 84 9e-17
At4g03240 [P] KOG3413 Mitochondrial matrix protein frataxin invo... 78 8e-15
Hs14744197 [P] KOG3413 Mitochondrial matrix protein frataxin inv... 75 4e-14
7291011 [P] KOG3413 Mitochondrial matrix protein frataxin involv... 75 4e-14
ECU01g1310 [P] KOG3413 Mitochondrial matrix protein frataxin inv... 70 2e-12
>YDL120w [P] KOG3413 Mitochondrial matrix protein frataxin involved in Fe/S
protein biosynthesis
Length = 174
Score = 164 bits (414), Expect = 9e-41
Identities = 75/133 (56%), Positives = 103/133 (77%), Gaps = 2/133 (1%)
Query: 45 ILNQHNLPFVTVQRMHNSIAASTDGKTIPEEILDMPIEVYHEISDEFMDSLLDQLEILCD 104
+ N+ N T Q+ + +STDG+ +P+E+L++P+E YHE +D+++D LLD LE L +
Sbjct: 36 VTNKKNHTVNTFQKRF--VESSTDGQVVPQEVLNLPLEKYHEEADDYLDHLLDSLEELSE 93
Query: 105 YHPEVVQDVEMSQGVMSIEVPSVGTYVINKQPPNKQIWLASPVSGPNRFDYYQKEWVSLR 164
HP+ + DVE+S GVM++E+P+ GTYVINKQPPNKQIWLASP+SGPNRFD EWVSLR
Sbjct: 94 AHPDCIPDVELSHGVMTLEIPAFGTYVINKQPPNKQIWLASPLSGPNRFDLLNGEWVSLR 153
Query: 165 DGTKLLDILNKEL 177
+GTKL DIL +E+
Sbjct: 154 NGTKLTDILTEEV 166
>CE19476 [P] KOG3413 Mitochondrial matrix protein frataxin involved in Fe/S
protein biosynthesis
Length = 136
Score = 85.5 bits (210), Expect = 4e-17
Identities = 47/107 (43%), Positives = 65/107 (59%), Gaps = 3/107 (2%)
Query: 84 YHEISDEFMDSLLDQLEILCDYHPEVVQ-DVEMSQGVMSIEVP-SVGTYVINKQPPNKQI 141
Y +D ++ L D + + D P Q DV + GV+++ V SVGTYVINKQ PNKQI
Sbjct: 25 YETAADSTLERLSDYFDQIADSFPVSEQFDVSHAMGVLTVNVSKSVGTYVINKQSPNKQI 84
Query: 142 WLASPVSGPNRFDYYQK-EWVSLRDGTKLLDILNKELSDRLEGDEID 187
WL+SP+SGP R+D ++ +W DG +L +LN+E L D ID
Sbjct: 85 WLSSPMSGPKRYDLEEEGKWTYAHDGEQLDSLLNREFRKILADDRID 131
>Hs4503785 [P] KOG3413 Mitochondrial matrix protein frataxin involved in Fe/S
protein biosynthesis
Length = 210
Score = 84.7 bits (208), Expect = 7e-17
Identities = 47/110 (42%), Positives = 71/110 (63%), Gaps = 5/110 (4%)
Query: 84 YHEISDEFMDSLLDQLEILCDYHPEVVQDVEMS--QGVMSIEVPS-VGTYVINKQPPNKQ 140
Y +++E +DSL + E L D P +D ++S GV+++++ +GTYVINKQ PNKQ
Sbjct: 95 YERLAEETLDSLAEFFEDLAD-KPYTFEDYDVSFGSGVLTVKLGGDLGTYVINKQTPNKQ 153
Query: 141 IWLASPVSGPNRFDYYQKEWVSLRDGTKLLDILNKELSDRLEGDEIDLHY 190
IWL+SP SGP R+D+ K WV DG L ++L EL+ L+ ++DL +
Sbjct: 154 IWLSSPSSGPKRYDWTGKNWVFSHDGVSLHELLAAELTKALK-TKLDLSW 202
>SPCC1183.03c [P] KOG3413 Mitochondrial matrix protein frataxin involved in Fe/S
protein biosynthesis
Length = 158
Score = 84.3 bits (207), Expect = 9e-17
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
Query: 84 YHEISDEFMDSLLDQLEILCDYHPEVVQDVEMSQGVMSIEVPSVGTYVINKQPPNKQIWL 143
YH ++D+ +D L D E L + + D++ + GV+++ + GTYVINKQPP QIWL
Sbjct: 47 YHRVADDTLDVLNDTFEDLLEEVGKKDYDIQYANGVITLMLGEKGTYVINKQPPAHQIWL 106
Query: 144 ASPVSGPNRFDY--YQKEWVSLRDGTKLLDILNKELS 178
+SPVSGP ++Y K W S RD LL IL+ E S
Sbjct: 107 SSPVSGPKHYEYSLKSKTWCSTRDEGTLLGILSSEFS 143
>At4g03240 [P] KOG3413 Mitochondrial matrix protein frataxin involved in Fe/S
protein biosynthesis
Length = 143
Score = 77.8 bits (190), Expect = 8e-15
Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 9/131 (6%)
Query: 60 HNSIAASTDGKTIPEEILDMPIEVYHEISDEFMDSLLDQLEILCDYHPEVVQDVEMSQGV 119
H + GK + E E +H++++ ++ LL+++E D D++ V
Sbjct: 19 HTGFSKPEHGKYVNRE------EEFHKLANFTINHLLEKIEDYGDNVQIDGFDIDYGNEV 72
Query: 120 MSIEVPSVGTYVINKQPPNKQIWLASPVSGPNRFDYYQ--KEWVSLRDGTKLLDILNKEL 177
+++++ S+GTYV+NKQ PN+QIW++SPVSGP+RFD+ + W+ R KL +L +EL
Sbjct: 73 LTLKLGSLGTYVLNKQTPNRQIWMSSPVSGPSRFDWDRDANAWIYRRTEAKLHKLLEEEL 132
Query: 178 SDRLEGDEIDL 188
+ L G+ I L
Sbjct: 133 -ENLCGEPIQL 142
>Hs14744197 [P] KOG3413 Mitochondrial matrix protein frataxin involved in Fe/S
protein biosynthesis
Length = 135
Score = 75.5 bits (184), Expect = 4e-14
Identities = 43/102 (42%), Positives = 63/102 (61%), Gaps = 4/102 (3%)
Query: 84 YHEISDEFMDSLLDQLEILCDYHPEVVQDVEMS--QGVMSIEVP-SVGTYVINKQPPNKQ 140
Y +++E +DSL + E L D P +D ++S GV++ ++ + TYVINKQ PNKQ
Sbjct: 20 YERLAEESLDSLAEFFEDLAD-KPYTFEDYDVSFGSGVLTGKLGRDLATYVINKQTPNKQ 78
Query: 141 IWLASPVSGPNRFDYYQKEWVSLRDGTKLLDILNKELSDRLE 182
IWL+SP SG R+D+ +K WV D L D+L EL+ L+
Sbjct: 79 IWLSSPSSGLKRYDWTEKNWVYSHDCVSLHDVLAAELTKALK 120
>7291011 [P] KOG3413 Mitochondrial matrix protein frataxin involved in Fe/S
protein biosynthesis
Length = 190
Score = 75.5 bits (184), Expect = 4e-14
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 13/104 (12%)
Query: 97 DQLEILCDYHPEVVQ--------DVEMSQGVMSIEVPSV-GTYVINKQPPNKQIWLASPV 147
D L+ LCDY E+ + DV S GV+++ + GTYVIN+Q PNKQIWL+SP
Sbjct: 79 DTLDALCDYFEELTENASELQGTDVAYSDGVLTVNLGGQHGTYVINRQTPNKQIWLSSPT 138
Query: 148 SGPNRFDYY----QKEWVSLRDGTKLLDILNKELSDRLEGDEID 187
SGP R+D+ W+ G L ++L +E+ L+ +D
Sbjct: 139 SGPKRYDFVGTVAAGRWIYKHSGQSLHELLQQEIPGILKSQSVD 182
>ECU01g1310 [P] KOG3413 Mitochondrial matrix protein frataxin involved in Fe/S
protein biosynthesis
Length = 118
Score = 70.1 bits (170), Expect = 2e-12
Identities = 36/109 (33%), Positives = 64/109 (58%), Gaps = 8/109 (7%)
Query: 70 KTIPEEILDMPIEVYHEISDEFMDSLLDQLEILCDYHPEVVQDVEMSQGVMSIEVPSVGT 129
K PE+++ ++YH+++DE + L +QL+ D +D G + I++ +VG
Sbjct: 4 KQTPEDVITR--QLYHKLADETLTDLSEQLDKELDGGYADYKD-----GNLQIKIDNVGE 56
Query: 130 YVINKQPPNKQIWLASPVSGPNRFDYYQK-EWVSLRDGTKLLDILNKEL 177
Y+ NKQP + QIW +SP++GP +FD ++ EW+ L+ T + +EL
Sbjct: 57 YMFNKQPASMQIWASSPITGPRKFDICRRHEWIDLKSNTSFSRYIEEEL 105
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.136 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,154,282
Number of Sequences: 60738
Number of extensions: 478756
Number of successful extensions: 1211
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1200
Number of HSP's gapped (non-prelim): 8
length of query: 190
length of database: 30,389,216
effective HSP length: 100
effective length of query: 90
effective length of database: 24,315,416
effective search space: 2188387440
effective search space used: 2188387440
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)