ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2285 good O KOG0367 Posttranslational modification, protein turnover, chaperones Protein geranylgeranyltransferase Type I, beta subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2285 789922 791004 361
(361 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL155w [O] KOG0367 Protein geranylgeranyltransferase Type I bet... 336 3e-92
SPAC2E1P5.04c [O] KOG0367 Protein geranylgeranyltransferase Type... 124 2e-28
7296904 [O] KOG0367 Protein geranylgeranyltransferase Type I bet... 108 9e-24
7295883 [O] KOG0366 Protein geranylgeranyltransferase type II be... 108 2e-23
Hs4826900 [O] KOG0367 Protein geranylgeranyltransferase Type I b... 107 2e-23
HsM4759018 [O] KOG0366 Protein geranylgeranyltransferase type II... 103 4e-22
Hs21359854 [O] KOG0366 Protein geranylgeranyltransferase type II... 102 9e-22
At5g12210 [O] KOG0366 Protein geranylgeranyltransferase type II ... 98 2e-20
CE22159 [O] KOG0367 Protein geranylgeranyltransferase Type I bet... 96 1e-19
At3g12070 [O] KOG0366 Protein geranylgeranyltransferase type II ... 92 9e-19
At2g39550 [O] KOG0367 Protein geranylgeranyltransferase Type I b... 91 3e-18
YPR176c [O] KOG0366 Protein geranylgeranyltransferase type II be... 87 5e-17
CE24762 [O] KOG0366 Protein geranylgeranyltransferase type II be... 87 5e-17
CE09598 [O] KOG0365 Beta subunit of farnesyltransferase 86 1e-16
SPAC167.02 [O] KOG0366 Protein geranylgeranyltransferase type II... 75 2e-13
YDL090c [O] KOG0365 Beta subunit of farnesyltransferase 74 3e-13
7300143 [O] KOG0365 Beta subunit of farnesyltransferase 74 4e-13
SPAC17G6.04c [O] KOG0365 Beta subunit of farnesyltransferase 70 5e-12
Hs10835059 [O] KOG0365 Beta subunit of farnesyltransferase 67 4e-11
At5g40280 [O] KOG0365 Beta subunit of farnesyltransferase 64 4e-10
>YGL155w [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 376
Score = 336 bits (862), Expect = 3e-92
Identities = 176/362 (48%), Positives = 229/362 (62%), Gaps = 15/362 (4%)
Query: 12 KHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGKPVRKDFQYSLDWIRSCYI-- 69
KH KF +RHLQLLPS D NR+AI FYS++ + + V + L W+R YI
Sbjct: 15 KHRKFFERHLQLLPSSHQGHDVNRMAIIFYSISGLSIFDVNVSAKYGDHLGWMRKHYIKT 74
Query: 70 -----ELADYSGFAIPSFRHAKQLTTINLPNTLFGLICLMLLGDHEFFDEKLNRDTLGKF 124
E SGF + TTINLPNTLF L+ +++L D+E+F+ L++ +L +F
Sbjct: 75 VLDDTENTVISGFVGSLVMNIPHATTINLPNTLFALLSMIMLRDYEYFETILDKRSLARF 134
Query: 125 ISSCQLPD-GSFTSFLD---NAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSRYINV 180
+S CQ PD GSF S LD N G S DS DLRFCYIAV+ILY+ GCRS+ DF YI+
Sbjct: 135 VSKCQRPDRGSFVSCLDYKTNCG--SSVDSDDLRFCYIAVAILYICGCRSKEDFDEYIDT 192
Query: 181 SKLLQYIMSRQCTMGGFGDWNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDTLHWLVNRQ 240
KLL YIMS+QC G FG NEPH GYTSC + F++DT+ WL++RQ
Sbjct: 193 EKLLGYIMSQQCYNGAFGAHNEPHSGYTSCALSTLALLSSLEKLSDKFKEDTITWLLHRQ 252
Query: 241 VSAIGVF-VEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRILEPQRWSQLIDVP 299
VS+ G E +LN YD D GGF GRENK ADTCYAFWCLNSL +L + W L
Sbjct: 253 VSSHGCMKFESELNASYDQSDDGGFQGRENKFADTCYAFWCLNSLHLL-TKDWKMLCQTE 311
Query: 300 LIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISALKLIDDEINGVLCIPKLIMDNFN 359
L+ +YLL++TQ + GGF+KND++D D+YHS +G +AL LI+ + NG LCIP+ I ++F+
Sbjct: 312 LVTNYLLDRTQKTLTGGFSKNDEEDADLYHSCLGSAALALIEGKFNGELCIPQEIFNDFS 371
Query: 360 LR 361
R
Sbjct: 372 KR 373
>SPAC2E1P5.04c [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 355
Score = 124 bits (311), Expect = 2e-28
Identities = 112/362 (30%), Positives = 163/362 (44%), Gaps = 70/362 (19%)
Query: 11 AKHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLG--KPVRKDFQYS-LDWIRSC 67
AKHI F +RHL L P+ + D R +AF+ L ++LL + D + S ++WI
Sbjct: 6 AKHIAFFKRHLILFPTPYEEHDCERTVLAFFCLLGLDLLNALNTIDDDDKKSWIEWIYKN 65
Query: 68 YIELAD----YSGFAIPSFRHAKQLTTI----NLPNTLFGLICLMLLGDHEFFDEKLNRD 119
Y+ YSGF ++R Q + L T+F + CL+ LGD+ +++RD
Sbjct: 66 YVTKESKGIKYSGF--QAYRTGIQPISFEQEPQLAGTVFSICCLLFLGDNL---SRIDRD 120
Query: 120 TLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSRYIN 179
+ F+ C+ G F S PS D D+R Y+A +I L+ DFS
Sbjct: 121 LIKNFVELCKTSQGHFRSI----AVPSCSD-QDMRQLYMATTIASLL------DFSLSDP 169
Query: 180 VSKLLQYIMSRQCTMGGFG--DWNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDT----- 232
+ +QYI S Q GGF + E H G T C IP S +
Sbjct: 170 LCS-IQYIKSCQRYEGGFSLLPYGEAHAGATFC--ALASWSLILKMIPNSSLNTSNQSYN 226
Query: 233 -----------LHWLVNRQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCL 281
+ WL +RQ+S SGG NGR NK DTCYA+W L
Sbjct: 227 LMDCVPKVERLIRWLASRQLS------------------SGGLNGRTNKDVDTCYAYWVL 268
Query: 282 NSLRILEPQRWSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISALKLID 341
+SL++L+ ID + YLL Q+ + GGF+K + PD+ HS +G+ A+ D
Sbjct: 269 SSLKLLDA---LPFIDGGELEKYLLLHAQHAL-GGFSKTPGEFPDVLHSALGLYAMAYQD 324
Query: 342 DE 343
D+
Sbjct: 325 DK 326
>7296904 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 395
Score = 108 bits (271), Expect = 9e-24
Identities = 97/351 (27%), Positives = 154/351 (43%), Gaps = 66/351 (18%)
Query: 10 VAKHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGK------PVRKDFQYSLDW 63
++KH K R L LLP+ D R I F+++ +++L +R+D +DW
Sbjct: 12 LSKHAKNLLRFLNLLPARMASHDNTRSTIVFFAVCGLDVLNSLHLVPPQLRQDI---IDW 68
Query: 64 IRSCYIELADYS----GFA-----IPSFRHAKQLTTI------NLPNTLFGLICLMLLGD 108
I + D GF +P A+ L + +L T L L+ LGD
Sbjct: 69 IYGGLVVPRDNEKNCGGFMGCRAMVPKTEDAEILECMRNYQWGHLAMTYTSLAVLVTLGD 128
Query: 109 HEFFDEKLNRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGC 168
+L+R ++ +++ Q P+GSF++ +D + D+RF Y A +I Y++
Sbjct: 129 DL---SRLDRKSIVDGVAAVQKPEGSFSACIDGS-------EDDMRFVYCAATICYML-- 176
Query: 169 RSESDFSRYINVSKLLQYIMSRQCTMGGFGDW--NEPHGGYTSCXXXXXXXXXXXXXIPA 226
D+ +N + Q+I GF E HGG T C + A
Sbjct: 177 ----DYWGDVNKETMFQFITRSLRYDYGFSQELEGEAHGGTTFCALAALHLSGQLHRLDA 232
Query: 227 SFRQDTLHWLVNRQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRI 286
+ + WL+ RQ+ GF GR NK DTCY+FW SL I
Sbjct: 233 TTVERMKRWLIFRQMD--------------------GFQGRPNKPVDTCYSFWIGASLCI 272
Query: 287 LEPQRWSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISAL 337
L+ +L D R+++L+ TQ+K++GGFAK Q PD +H+ +G+ L
Sbjct: 273 LD---GFELTDYARNREFILS-TQDKLIGGFAKWPQATPDPFHTYLGLCGL 319
>7295883 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 347
Score = 108 bits (269), Expect = 2e-23
Identities = 93/359 (25%), Positives = 166/359 (45%), Gaps = 60/359 (16%)
Query: 12 KHIKFCQRHLQLLPSHRLDIDPN-RLAIAFYSLTAIELLGKPVRKDFQYSLDWIRSCYIE 70
KH+++ + H + + + R++ ++ TA++++G+ R + + +++++ C +
Sbjct: 33 KHVEYIENHGKQEDDYEYCMTEFLRMSGIYWGTTALDIMGQLERLERKSIIEFVKRC--Q 90
Query: 71 LADYSGFAIPSFRHAKQLTTINLPNTLFGLICLMLLGDHEFFDEKLNRDTLGKFISSCQL 130
+ GFA P H P+ L+ L + +L ++ +E ++R+ + +F+ Q
Sbjct: 91 CPNTGGFA-PCEGHD--------PHLLYTLSAIQILCTYDALEE-IDREAVVRFVVGLQQ 140
Query: 131 PDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSR 190
PDGSF + K+ D RF + AV+ L L+G ++ I+V K +++++S
Sbjct: 141 PDGSF--------FGDKWGEVDTRFSFCAVASLTLLGRMEQT-----IDVEKAVKFVLSC 187
Query: 191 -QCTMGGFGD--WNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDTLHW-LVNRQVSAIGV 246
T GGFG E H G C + D L W L RQ+
Sbjct: 188 CNQTDGGFGSKPGAESHAGLIYCCVGFFSLTHRLHLLDV----DKLGWWLCERQLP---- 239
Query: 247 FVEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRILEPQRWSQLIDVPLIRDYLL 306
SGG NGR KL D CY++W L SL I+ W I ++ ++L
Sbjct: 240 --------------SGGLNGRPEKLPDVCYSWWVLASLTIMGRLHW---ISSEKLQQFIL 282
Query: 307 NQTQNKMVGGFAKNDQDDPDIYHSMMGISALKLIDDE----INGVLCIPKLIMDNFNLR 361
+ Q+ GGF+ + PDI+H++ GI L L+ IN LC+P+ I+D ++
Sbjct: 283 S-CQDTETGGFSDRTGNMPDIFHTLFGIGGLSLLGHSGLKAINPTLCMPQYIIDRLGIK 340
>Hs4826900 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 377
Score = 107 bits (268), Expect = 2e-23
Identities = 93/351 (26%), Positives = 154/351 (43%), Gaps = 60/351 (17%)
Query: 12 KHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGKPVRKDFQYSLDWIRSCYI-E 70
+H++F QR LQ+LP ++ +RL IAF++L+ +++L + ++WI S +
Sbjct: 24 RHVRFFQRCLQVLPERYSSLETSRLTIAFFALSGLDMLDSLDVVNKDDIIEWIYSLQVLP 83
Query: 71 LADYSGFAIPSFRHAKQL----------------TTINLPNTLFGLICLMLLGDHEFFDE 114
D S FR + L + ++ T GL CL++LGD
Sbjct: 84 TEDRSNLNRCGFRGSSYLGIPFNPSKAPGTAHPYDSGHIAMTYTGLSCLVILGDDL---S 140
Query: 115 KLNRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDF 174
++N++ + + QL DGSF + + + +D+RF Y A I Y++ S D
Sbjct: 141 RVNKEACLAGLRALQLEDGSFCAVPEGS-------ENDMRFVYCASCICYMLNNWSGMD- 192
Query: 175 SRYINVSKLLQYIMSRQCTMGGF--GDWNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDT 232
+ K + YI G G E HGG T C + + +
Sbjct: 193 -----MKKAITYIRRSMSYDNGLAQGAGLESHGGSTFCGIASLCLMGKLEEVFSEKELNR 247
Query: 233 L-HWLVNRQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRILEPQR 291
+ W + RQ G++GR NK DTCY+FW +L++L +
Sbjct: 248 IKRWCIMRQ--------------------QNGYHGRPNKPVDTCYSFWVGATLKLL---K 284
Query: 292 WSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISALKLIDD 342
Q + R+Y+L+ TQ+++VGGFAK PD H+ GI L L+++
Sbjct: 285 IFQYTNFEKNRNYILS-TQDRLVGGFAKWPDSHPDALHAYFGICGLSLMEE 334
>HsM4759018 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 331
Score = 103 bits (257), Expect = 4e-22
Identities = 87/333 (26%), Positives = 151/333 (45%), Gaps = 58/333 (17%)
Query: 35 RLAIAFYSLTAIELLGKPVRKDFQYSLDWIRSCYIELADYSGFAIPSFRHAKQLTTINLP 94
R++ ++ LT ++L+G+ R + + L +I+SC E S S H P
Sbjct: 46 RMSGIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISA----SIGHD--------P 93
Query: 95 NTLFGLICLMLLGDHEFFDEKLNRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLR 154
+ L+ L + +L ++ + ++ + + +++ Q DGSF + + D R
Sbjct: 94 HLLYTLSAVQILTLYDSINV-IDVNKVVEYVKGLQKEDGSFAGDI--------WGEIDTR 144
Query: 155 FCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSRQCTMGGFG--DWNEPHGGYTSCXX 212
F + AV+ L L+G INV K +++++S + GGFG +E H G C
Sbjct: 145 FSFCAVATLALLGKLDA------INVEKAIEFVLSCMNSDGGFGCRPGSESHAGQIYCCT 198
Query: 213 XXXXXXXXXXXIPASFRQDTLHWLVNRQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKLA 272
+ + WL RQ+ SGG NGR KL
Sbjct: 199 GFLAITSQLHQVTSDLLG---WWLCERQLP------------------SGGLNGRPEKLP 237
Query: 273 DTCYAFWCLNSLRILEPQRWSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMM 332
D CY++W L SL+I+ W ID +R+++L Q++ GGFA D D +H++
Sbjct: 238 DVCYSWWVLASLKIIGRLHW---IDREKLRNFIL-ACQDEETGGFADRPGDMVDPFHTLF 293
Query: 333 GISALKLIDDE----INGVLCIPKLIMDNFNLR 361
GI+ L L+ +E +N V C+P+ ++ N++
Sbjct: 294 GIAGLSLLGEEQIKPVNPVFCMPEEVLQRVNVQ 326
>Hs21359854 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 331
Score = 102 bits (254), Expect = 9e-22
Identities = 89/334 (26%), Positives = 151/334 (44%), Gaps = 60/334 (17%)
Query: 35 RLAIAFYSLTAIELLGKPVRKDFQYSLDWIRSCYIELADYSGFAIPSFRHAKQLTTINLP 94
R++ ++ LT ++L+G+ R + + L +I+SC E S S H P
Sbjct: 46 RMSGIYWGLTVMDLMGQLHRMNREEILAFIKSCQHECGGISA----SIGHD--------P 93
Query: 95 NTLFGLICLMLLGDHEFFDEKLNRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLR 154
+ L+ L + +L ++ + ++ + + +++ Q DGSF + + D R
Sbjct: 94 HLLYTLSAVQILTLYDSINV-IDVNKVVEYVKGLQKEDGSFAGDI--------WGEIDTR 144
Query: 155 FCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSRQCTMGGFG--DWNEPHGGYTSCXX 212
F + AV+ L L+G INV K +++++S GGFG +E H G C
Sbjct: 145 FSFCAVATLALLGKLDA------INVEKAIEFVLSCMNFDGGFGCRPGSESHAGQIYCCT 198
Query: 213 XXXXXXXXXXXIPASFRQDTLHW-LVNRQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKL 271
+ D L W L RQ+ SGG NGR KL
Sbjct: 199 GFLAITSQLHQV----NSDLLGWWLCERQLP------------------SGGLNGRPEKL 236
Query: 272 ADTCYAFWCLNSLRILEPQRWSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSM 331
D CY++W L SL+I+ W ID +R+++L Q++ GGFA D D +H++
Sbjct: 237 PDVCYSWWVLASLKIIGRLHW---IDREKLRNFIL-ACQDEETGGFADRPGDMVDPFHTL 292
Query: 332 MGISALKLIDDE----INGVLCIPKLIMDNFNLR 361
GI+ L L+ +E +N V C+P+ ++ N++
Sbjct: 293 FGIAGLSLLGEEQIKPVNPVFCMPEEVLQRVNVQ 326
>At5g12210 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 313
Score = 97.8 bits (242), Expect = 2e-20
Identities = 87/317 (27%), Positives = 143/317 (44%), Gaps = 62/317 (19%)
Query: 31 IDPNRLAIAFYSLTAIELLGKPVRKDFQYSLDWIRSCYIELADYSGFAIPSFRHAKQLTT 90
+D R+ A++ LT ++LL K + + W+ +C E ++G T
Sbjct: 28 MDHLRMNGAYWGLTTLDLLDKLGCVSEEEVISWLMTCQHESGGFAG------------NT 75
Query: 91 INLPNTLFGLICLMLLGDHEFFDEKLNRDTLGK---FISSCQLPDGSFTSFLDNAGYPSK 147
+ P+ L+ L + +L FD K+N +GK +++ Q DGSF+ +
Sbjct: 76 GHDPHILYTLSAVQILA---LFD-KINILDIGKVSSYVAKLQNEDGSFSGDM-------- 123
Query: 148 FDSHDLRFCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSRQCTMGGFG--DWNEPHG 205
+ D RF YIA+ L ++ C + INV K ++YI+S + GGFG E H
Sbjct: 124 WGEIDTRFSYIAICCLSILKCLDK------INVEKAVKYIVSCKNLDGGFGCTPGAESHA 177
Query: 206 GYTSCXXXXXXXXXXXXXIPASFRQDTLHW-LVNRQVSAIGVFVEQDLNDDYDPDDSGGF 264
G C + +D+L W L RQ+ A GG
Sbjct: 178 GQIFCCVGALAITGSLHHVD----KDSLGWWLCERQLKA------------------GGL 215
Query: 265 NGRENKLADTCYAFWCLNSLRILEPQRWSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDD 324
NGR KLAD CY++W L+SL +++ W ID + ++L+ Q+ GG + +D
Sbjct: 216 NGRPEKLADVCYSWWVLSSLIMIDRVHW---IDKAKLVKFILD-CQDLDNGGISDRPEDA 271
Query: 325 PDIYHSMMGISALKLID 341
DI+H+ G++ L L++
Sbjct: 272 VDIFHTYFGVAGLSLLE 288
>CE22159 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 360
Score = 95.5 bits (236), Expect = 1e-19
Identities = 91/344 (26%), Positives = 150/344 (43%), Gaps = 53/344 (15%)
Query: 12 KHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGK------PVRKDFQYSLDWIR 65
KHI F RHL + P ++ +R I +++++++LLG+ P R+ Q +DWI
Sbjct: 31 KHIGFLIRHLNVFPQPYNTLETSRNTIFLFAISSLDLLGELDNLLTPERR--QAYIDWIY 88
Query: 66 SCYIELADYSGFAIPSFRHAKQLTTINLPNTLFGLICLMLLGDHEFFDEKLNRDTLGKFI 125
+ GF NL T L+ L +LGD +K++R + K +
Sbjct: 89 GLQFTNGNVCGFRGSHSCENSGYDEANLAQTYSALLSLAILGDDL---KKVDRKAILKTV 145
Query: 126 SSCQLPDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSRYINVSKLLQ 185
+ Q +G F S G S D+RF + AV+I +++ + D + I+ +KL
Sbjct: 146 KTAQRDNGCFWS--QGVGSES-----DMRFVFCAVAISHIL----DGDKEQTIDWTKLAG 194
Query: 186 YIMSRQCTMGGFGD--WNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDT---LHWLVNRQ 240
++ GG G +E HGG T C R+D + W + +Q
Sbjct: 195 FLRQSLNIDGGIGQAPGDESHGGSTFCAIASLALSNRLWTEEVLTRRDIDRLIRWAIQKQ 254
Query: 241 VSAIGVFVEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRILEPQRWSQLIDVPL 300
D+ GF+GR +K D+CYAFW +L+IL L+
Sbjct: 255 ----------DI----------GFHGRAHKPDDSCYAFWIGATLKILNAY---HLVSKQH 291
Query: 301 IRDYLLNQTQNKMVGGFAKNDQDD--PDIYHSMMGISALKLIDD 342
+R++L+ Q+ +GGF K + DI H+ I+AL L+ +
Sbjct: 292 LREFLM-ICQHPHIGGFCKYPEPGGYSDILHTYFSIAALSLLGE 334
>At3g12070 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 317
Score = 92.4 bits (228), Expect = 9e-19
Identities = 93/349 (26%), Positives = 153/349 (43%), Gaps = 69/349 (19%)
Query: 5 MDDKNVA-KHIKFCQRHLQLLPSHRLD------IDPNRLAIAFYSLTAIELLGKPVRKDF 57
M DK VA KH+++ L L+ + + +D R+ A++ LT + LL K
Sbjct: 1 MADKLVAGKHLRYI---LNLMAEKKKESFESVVMDHLRMNGAYWGLTTLALLDKLGSVSE 57
Query: 58 QYSLDWIRSCYIELADYSGFAIPSFRHAKQLTTINLPNTLFGLICLMLLGDHEFFDEK-- 115
+ W+ +C E ++G T + P+ L+ L + +L FD+
Sbjct: 58 DEVVSWVMTCQHESGGFAG------------NTGHDPHVLYTLSAVQILA---LFDKLNI 102
Query: 116 LNRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFS 175
L+ + + +I+ Q DGSF+ + + D RF YIA+ L ++ C +
Sbjct: 103 LDVEKVSNYIAGLQNEDGSFSGDI--------WGEVDTRFSYIAICCLSILKCLDK---- 150
Query: 176 RYINVSKLLQYIMSRQCTMGGFG--DWNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDTL 233
INV K + YI+S + GGFG E H G C + +D L
Sbjct: 151 --INVKKAVDYIVSCKNLDGGFGCSPGAESHAGQIFCCVGALAITGNLHRVD----KDLL 204
Query: 234 HW-LVNRQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRILEPQRW 292
W L RQ DY+ SGG NGR KL D CY++W L+SL +++ W
Sbjct: 205 GWWLCERQ--------------DYE---SGGLNGRPEKLPDVCYSWWVLSSLIMIDRVHW 247
Query: 293 SQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISALKLID 341
I+ + ++L+ +Q+ GG + DI+H+ G++ L L++
Sbjct: 248 ---IEKAKLVKFILD-SQDMDNGGISDRPSYTVDIFHTYFGVAGLSLLE 292
>At2g39550 [O] KOG0367 Protein geranylgeranyltransferase Type I beta subunit
Length = 375
Score = 90.9 bits (224), Expect = 3e-18
Identities = 97/366 (26%), Positives = 150/366 (40%), Gaps = 70/366 (19%)
Query: 12 KHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGKPVRKDFQYSLDWIRSCY--- 68
+H+ + + +LLP H + NRL +A + ++ + LG R D W+ S
Sbjct: 39 RHLMYLEMMYELLPYHYQSQEINRLTLAHFIISGLHFLGARDRVDKDVVAKWVLSFQAFP 98
Query: 69 ---IELADYSGFAIPSFRHAK---------QLTTINLPNTLFGLICLMLLGDHEFFDEKL 116
+ L D + R ++ + +L +T L L ++G H+ +
Sbjct: 99 TNRVSLKDGEFYGFFGSRSSQFPIDENGDLKHNGSHLASTYCALAILKVIG-HDL--STI 155
Query: 117 NRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSR 176
+ +L + + Q DGSF + G DLRF Y A +I Y++ S D
Sbjct: 156 DSKSLLISMINLQQDDGSFMPI--HIG-----GETDLRFVYCAAAICYMLDSWSGMDKES 208
Query: 177 YINVSKLLQYIMSRQCTMGGFG--DWNEPHGGYTSCXXXX-----------XXXXXXXXX 223
N YI++ Q GGFG +E HGG T C
Sbjct: 209 AKN------YILNCQSYDGGFGLIPGSESHGGATYCAIASLRLMGYIGVDLLSNDSSSSI 262
Query: 224 IPASFRQDTLHWLVNRQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNS 283
I S L+W + RQ + GGF GR NK +DTCYAFW
Sbjct: 263 IDPSL---LLNWCLQRQA------------------NDGGFQGRTNKPSDTCYAFWIGAV 301
Query: 284 LRILEPQRWSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISALKLIDDE 343
L+++ LID +R +L++ Q+K GGF+K PD+YHS G +A L++++
Sbjct: 302 LKLI---GGDALIDKMALRKFLMS-CQSK-YGGFSKFPGQLPDLYHSYYGYTAFSLLEEQ 356
Query: 344 INGVLC 349
LC
Sbjct: 357 GLSPLC 362
>YPR176c [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 325
Score = 86.7 bits (213), Expect = 5e-17
Identities = 88/330 (26%), Positives = 148/330 (44%), Gaps = 51/330 (15%)
Query: 35 RLAIAFYSLTAIELLGKPVRKDFQYSLDWIRSCYIELADYSGFAIPSFRH-AKQLTTINL 93
RL ++ LTA+ +L P + + ++ SC+ + Y FA P RH A LTT++
Sbjct: 35 RLNGIYWGLTALCVLDSPETFVKEEVISFVLSCWDD--KYGAFA-PFPRHDAHLLTTLSA 91
Query: 94 PNTLFGLICLMLLGDHEFFDEKLNRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDL 153
L L +LG D K+ L FI QL DGSF +F D
Sbjct: 92 VQILATYDALDVLGK----DRKVR---LISFIRGNQLEDGSFQG--------DRFGEVDT 136
Query: 154 RFCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSRQCTMGGFGDWNEPHGGYTSCXXX 213
RF Y A+S L ++G + V + +++ GGFG C
Sbjct: 137 RFVYTALSALSILGELTSEV------VDPAVDFVLKCYNFDGGFG----------LCPNA 180
Query: 214 XXXXXXXXXXIPASFRQDTLHWLVNRQVSAIGVFV-EQDLNDDYDPDDSGGFNGRENKLA 272
+ A + L L + Q+ IG ++ E+ L + GG NGR +KL
Sbjct: 181 ESHAAQAFTCLGALAIANKLDMLSDDQLEEIGWWLCERQLPE-------GGLNGRPSKLP 233
Query: 273 DTCYAFWCLNSLRILEPQRWSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMM 332
D CY++W L+SL I+ W I+ + +++L + Q++ GG + +++ D++H++
Sbjct: 234 DVCYSWWVLSSLAIIGRLDW---INYEKLTEFIL-KCQDEKKGGISDRPENEVDVFHTVF 289
Query: 333 GISALKLIDDE----INGVLCIPKLIMDNF 358
G++ L L+ + I+ + C+PK + F
Sbjct: 290 GVAGLSLMGYDNLVPIDPIYCMPKSVTSKF 319
>CE24762 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 335
Score = 86.7 bits (213), Expect = 5e-17
Identities = 70/245 (28%), Positives = 104/245 (41%), Gaps = 45/245 (18%)
Query: 114 EKLNRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESD 173
EK + DT+ +++ Q DGSF L D RF +++ +L+G S
Sbjct: 118 EKADADTISEYVKGLQQEDGSFCGDLSG--------EVDTRFTLCSLATCHLLGRLST-- 167
Query: 174 FSRYINVSKLLQYIMSRQCTMGGFGD--WNEPHGGYTSCXXXXXXXXXXXXXIPASFRQD 231
+N+ ++++M T GGFG +E H G C I R
Sbjct: 168 ----LNIDSAVRFLMRCYNTDGGFGTRPGSESHSGQIYCCVGALAIAGRLDEID---RDR 220
Query: 232 TLHWLVNRQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRILEPQR 291
T WL RQ DSGG NGR KL D CY++W L SL IL
Sbjct: 221 TAEWLAFRQC------------------DSGGLNGRPEKLPDVCYSWWVLASLAILGRLN 262
Query: 292 WSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISALKLIDDE----INGV 347
+ ID ++ ++ Q+ GGFA D D +H++ GI+AL L D+ ++ +
Sbjct: 263 F---IDSDAMKKFIY-ACQDDETGGFADRPGDCADPFHTVFGIAALSLFGDDTLESVDPI 318
Query: 348 LCIPK 352
C+ K
Sbjct: 319 FCMTK 323
>CE09598 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 401
Score = 85.5 bits (210), Expect = 1e-16
Identities = 81/338 (23%), Positives = 137/338 (39%), Gaps = 55/338 (16%)
Query: 12 KHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGKPVRKD-FQYSLDWIRSCYIE 70
KH + R+L+ PS +D +R + ++ + A+++L + D + + +++SC
Sbjct: 65 KHASYLLRYLKNCPSSYATLDASRSWMCYWGVNALKILDAEIPNDVIENIIVFLKSCEHP 124
Query: 71 LADYSGFAIPSFRHAKQLTTINLPNTLFGLICLMLLGDHEFFDEKLNRDTLGKFISSCQL 130
Y G QL +L T ++CL+ L E +NR TL F+ C+
Sbjct: 125 EGGYGG-------GPGQLA--HLAPTYAAVMCLVSLQKEEAL-RSINRVTLFNFLKKCKH 174
Query: 131 PDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSR 190
G F Y + D+R Y A++ ++G + + + ++I+S
Sbjct: 175 ESGGF--------YMHEGGEIDMRSAYCALATCEIVGLPMDEISNG------VAEWIISC 220
Query: 191 QCTMGGFGD--WNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDTLHWLVNRQVSAIGVFV 248
Q GGFG + E HGGYT C + L W RQ+
Sbjct: 221 QSFEGGFGGEPYTEAHGGYTFCAVASLVLLNRFRLADM---EGLLRWATRRQMRF----- 272
Query: 249 EQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRILEPQRWSQ-------LIDVPLI 301
GGF GR NKL D CY+FW +L+ + + L + ++
Sbjct: 273 ------------EGGFQGRTNKLVDGCYSFWQGAIFPLLDGEMEREGRSLEKGLFEARML 320
Query: 302 RDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISALKL 339
+Y+L Q+ + GGF D+YH+ +S L +
Sbjct: 321 EEYILVGCQS-VHGGFKDKPDKPVDLYHTCYVLSGLSV 357
>SPAC167.02 [O] KOG0366 Protein geranylgeranyltransferase type II beta subunit
Length = 311
Score = 74.7 bits (182), Expect = 2e-13
Identities = 81/328 (24%), Positives = 131/328 (39%), Gaps = 60/328 (18%)
Query: 40 FYSLTAIELLGKPVRKDFQYSLDWIRSCYIELADYSGFAIPSFRHAKQLTTINLPNTLFG 99
++S + LL K + D + + ++ SC L + GFA H +T NT++
Sbjct: 37 YWSCMSFWLLKKKDQIDKERIVSFLLSC---LTESGGFACYP-GHDDHIT-----NTVYA 87
Query: 100 LICLMLLGDHEFFDEKLNRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLRFCYIA 159
+ L +L D +D + +I Q DGS ++ D RF Y
Sbjct: 88 VQVLAMLDSLHVVD----KDKVASYIIGLQNEDGSMKG--------DRWGEIDARFLYSG 135
Query: 160 VSILYLIGCRSESDFSRYINVSKLLQYIMSRQCTMGGFG--DWNEPHGGYTSCXXXXXXX 217
++ L ++G Y+N + + ++M GGFG E HG
Sbjct: 136 INCLAILGKLD------YLNKNTAVDWLMKCYNFDGGFGLCPGAESHGAMVFTCVAALKI 189
Query: 218 XXXXXXIPASFRQDTLHWLVN-RQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKLADTCY 276
I ++ L W ++ RQV GG NGR KL D+CY
Sbjct: 190 LNKLDLID----EELLGWWISERQVKG------------------GGLNGRPEKLPDSCY 227
Query: 277 AFWCLNSLRILEPQRWSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISA 336
+W L+ L I+ W ID + D+LL TQ+ GGFA +D D+YH+ ++
Sbjct: 228 GWWDLSPLAIIGKLDW---IDRNQLIDFLLG-TQDADSGGFADRKEDATDVYHTCFSLAG 283
Query: 337 LKLID----DEINGVLCIPKLIMDNFNL 360
L L+ + ++ C+P + L
Sbjct: 284 LSLLQFPNIEPVDPRFCLPLEVTQKMKL 311
>YDL090c [O] KOG0365 Beta subunit of farnesyltransferase
Length = 431
Score = 74.3 bits (181), Expect = 3e-13
Identities = 69/280 (24%), Positives = 113/280 (39%), Gaps = 44/280 (15%)
Query: 92 NLPNTLFGLICLMLLGDHEFFDEKLNRDTLGKFISSCQLPDGSFTSFLDNAGYPSKFDSH 151
+L +T + L L + + ++++R + +++ S + P+G F + L+
Sbjct: 156 HLASTYAAINALSLCDNIDGCWDRIDRKGIYQWLISLKEPNGGFKTCLE-------VGEV 208
Query: 152 DLRFCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSRQCTMGGFGDW---NEPHGGYT 208
D R Y A+SI L+ +E +L Y+ + Q GGFG +E HGGYT
Sbjct: 209 DTRGIYCALSIATLLNILTEE------LTEGVLNYLKNCQNYEGGFGSCPHVDEAHGGYT 262
Query: 209 SCXXXXXXXXXXXXXIPASFRQDTLHWLVNRQVSAIGVFVEQDLNDDYDPDDSGGFNGRE 268
C I + L W RQ+ + GF GR
Sbjct: 263 FCATASLAILRSMDQINV---EKLLEWSSARQLQ-----------------EERGFCGRS 302
Query: 269 NKLADTCYAFWCLNSLRILEPQRWSQLIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIY 328
NKL D CY+FW S ILE + Q + +RDY+L Q K G D Y
Sbjct: 303 NKLVDGCYSFWVGGSAAILEAFGYGQCFNKHALRDYILYCCQEKEQPGLRDKPGAHSDFY 362
Query: 329 HS---MMGISALK-----LIDDEINGVLCIPKLIMDNFNL 360
H+ ++G++ + +D + + C P ++ + L
Sbjct: 363 HTNYCLLGLAVAESSYSCTPNDSPHNIKCTPDRLIGSSKL 402
>7300143 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 419
Score = 73.6 bits (179), Expect = 4e-13
Identities = 81/338 (23%), Positives = 131/338 (37%), Gaps = 52/338 (15%)
Query: 12 KHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGKPVR-KDFQYSLDWIRSCYIE 70
+H + L+ LPS+ +D +R ++ L A +LL + + + ++ +C
Sbjct: 64 EHQYYLDAMLRRLPSNYECLDSSRAWCVYWILQAAQLLSFNFDDQTLNHVVQFLSNCRSP 123
Query: 71 LADYSGFAIPSFRHAKQLTTINLPNTLFGLICLMLLGDHEFFDEKLNRDTLGKFISSCQL 130
+ G + H L T + L ++G + + ++R TL +F+ S +
Sbjct: 124 TGGFGG-GPGQYAH--------LAPTYAAVNSLCIIGSEQAY-RAIDRPTLVQFLFSVRD 173
Query: 131 PDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSR 190
DGSF +D D+R Y A+S L+ + +I
Sbjct: 174 SDGSFRLHVDG--------ETDVRGAYCAISCAKLLNLPEPVIKELFAGTG---DWIAQC 222
Query: 191 QCTMGGFGDWN--EPHGGYTSCXXXXXXXXXXXXXIPASFRQDTLHWLVNRQVSAIGVFV 248
Q GGFG E HGGYT C RQ L W + RQ++
Sbjct: 223 QTYEGGFGGAPGLEAHGGYTFCGIAGLALLNEADKCD---RQALLKWTLRRQMTY----- 274
Query: 249 EQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRI-------LEPQRWSQLIDVPLI 301
GGF GR NKL D CY+FW ++ I ++ Q L DV +
Sbjct: 275 ------------EGGFQGRTNKLVDGCYSFWVGATIPITQATLSGVDKQMEHTLFDVEAL 322
Query: 302 RDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISALKL 339
++Y+L Q K GG D+YH+ +S + +
Sbjct: 323 QEYILLCCQ-KQSGGLIDKPGKPQDLYHTCYTLSGVSI 359
>SPAC17G6.04c [O] KOG0365 Beta subunit of farnesyltransferase
Length = 382
Score = 70.1 bits (170), Expect = 5e-12
Identities = 85/350 (24%), Positives = 137/350 (38%), Gaps = 57/350 (16%)
Query: 1 MQGVMDDKNVAKHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGKPVRKDFQYS 60
+ G N+ KH+K+ + L LPS +D +R + ++ L+++ +LGK + +
Sbjct: 22 LNGESQSFNLQKHLKYLTKMLDPLPSPFTVLDASRAWMVYWELSSLAILGKLDSSVCERA 81
Query: 61 LDWIRSCYIELADYSGFAIPSFRHAKQLTTINLPNTLFGLICLMLLGDHEFFDEKLNRDT 120
+ +R GF + + L+T + I + L D + RD
Sbjct: 82 ISSVRQL---KGPSGGFCGGNGQDEHLLST-------YASILSICLCDSTDAYSLIERDR 131
Query: 121 LGKFISSCQLPDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSRYINV 180
L ++ S + PDGSF ++N G D R Y AV + L+G +
Sbjct: 132 LYDWLFSLKNPDGSFR--VNNEG------ESDARSVYAAVCVSSLVGISMDDPL-----F 178
Query: 181 SKLLQYIMSRQCTMGGFG--DWNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDTLHWLVN 238
LQ++ Q GG + E HGGYT C + + T WLV
Sbjct: 179 EGTLQWLCKCQTYEGGLSGVPYAEAHGGYTFCALAAIALLGGLDNL-NEIKLST--WLVQ 235
Query: 239 RQVSAIGVFVEQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRILEPQRWSQ---- 294
RQ A+ GF+GR NKL D CY++W S I+ S
Sbjct: 236 RQDPAL-----------------YGFSGRSNKLVDGCYSWWVGASHVIVASGYGSASHKS 278
Query: 295 ----LIDVPLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHS---MMGISAL 337
+ + Y+L Q+ GG PD YH+ ++G+S++
Sbjct: 279 LPNLFYNPEKLLGYILQCCQSTS-GGLRDKPPKRPDQYHTCYCLLGLSSI 327
>Hs10835059 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 437
Score = 67.0 bits (162), Expect = 4e-11
Identities = 79/341 (23%), Positives = 129/341 (37%), Gaps = 58/341 (17%)
Query: 12 KHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGKPVRKDFQYSL-DWIRSCYIE 70
KH + +R L+ L +D +R + ++ L ++ELL +P+ + + ++ C
Sbjct: 77 KHFHYLKRGLRQLTDAYECLDASRPWLCYWILHSLELLDEPIPQIVATDVCQFLELCQSP 136
Query: 71 LADYSGFAIPSFRHAKQLTTINLPNTLFGLICLMLLGDHEFFDEKLNRDTLGKFISSCQL 130
+ G + H L T + L ++G E +D +NR+ L +++ S +
Sbjct: 137 EGGFGG-GPGQYPH--------LAPTYAAVNALCIIGTEEAYDI-INREKLLQYLYSLKQ 186
Query: 131 PDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSR 190
PDGSF + D+R Y A S+ L + F ++I
Sbjct: 187 PDGSFLMHVGG--------EVDVRSAYCAASVASLTNIITPDLFEG------TAEWIARC 232
Query: 191 QCTMGGFGD--WNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDTLHWLVNRQVSAIGVFV 248
Q GG G E HGGYT C + + L W+ +RQ+
Sbjct: 233 QNWEGGIGGVPGMEAHGGYTFCGLAALVILKRERSLNL---KSLLQWVTSRQMRF----- 284
Query: 249 EQDLNDDYDPDDSGGFNGRENKLADTCYAFWCLNSLRILEPQRWSQ----------LIDV 298
GGF GR NKL D CY+FW L +L +Q +
Sbjct: 285 ------------EGGFQGRCNKLVDGCYSFWQAGLLPLLHRALHAQGDPALSMSHWMFHQ 332
Query: 299 PLIRDYLLNQTQNKMVGGFAKNDQDDPDIYHSMMGISALKL 339
+++Y+L Q GG D YH+ +S L +
Sbjct: 333 QALQEYILMCCQCP-AGGLLDKPGKSRDFYHTCYCLSGLSI 372
>At5g40280 [O] KOG0365 Beta subunit of farnesyltransferase
Length = 482
Score = 63.5 bits (153), Expect = 4e-10
Identities = 67/271 (24%), Positives = 105/271 (38%), Gaps = 48/271 (17%)
Query: 12 KHIKFCQRHLQLLPSHRLDIDPNRLAIAFYSLTAIELLGKPVRKDFQYS-LDWIRSCYIE 70
K + + + L+ L +D NR + ++ L +I LLG+ V + + + +D++ C
Sbjct: 85 KQLDYLMKGLRQLGPQFSSLDANRPWLCYWILHSIALLGETVDDELESNAIDFLGRCQGS 144
Query: 71 LADYSGFAIPSFRHAKQLTTINLPNTLFGLICLMLLGDHEFFDEKLNRDTLGKFISSCQL 130
Y G QL +L T + L+ LG + +NR+ + F+ +
Sbjct: 145 EGGYGG-------GPGQLP--HLATTYAAVNALVTLGGDKALSS-INREKMSCFLRRMKD 194
Query: 131 PDGSFTSFLDNAGYPSKFDSHDLRFCYIAVSILYLIGCRSESDFSRYINVSKLLQYIMSR 190
G F D+R CY A+S+ ++ + L YI+S
Sbjct: 195 TSGGFRMH--------DMGEMDVRACYTAISVASILNIMDDE------LTQGLGDYILSC 240
Query: 191 QCTMGGFGD--WNEPHGGYTSCXXXXXXXXXXXXXIPASFRQDTLHWLVNRQVSAIGVFV 248
Q GG G +E HGGYT C + ++W V+RQ GV +
Sbjct: 241 QTYEGGIGGEPGSEAHGGYTYCGLAAMILINEVDRLNLD---SLMNWAVHRQ----GVEM 293
Query: 249 EQDLNDDYDPDDSGGFNGRENKLADTCYAFW 279
GF GR NKL D CY FW
Sbjct: 294 --------------GFQGRTNKLVDGCYTFW 310
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.325 0.142 0.447
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,708,564
Number of Sequences: 60738
Number of extensions: 981325
Number of successful extensions: 2463
Number of sequences better than 1.0e-05: 20
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2376
Number of HSP's gapped (non-prelim): 25
length of query: 361
length of database: 30,389,216
effective HSP length: 108
effective length of query: 253
effective length of database: 23,829,512
effective search space: 6028866536
effective search space used: 6028866536
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)