ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2309 check: MH L KOG0388 Replication, recombination and repair SNF2 family DNA-dependent ATPase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2309 802330 797864 -1489
(1489 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase 1300 0.0
SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase 498 e-140
At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase 465 e-130
7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase 459 e-128
ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase 374 e-103
At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase 303 1e-81
CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase 301 4e-81
Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase 293 1e-78
YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase 285 3e-76
Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 265 5e-70
SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF co... 262 3e-69
7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 261 5e-69
YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 258 4e-68
YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 258 7e-68
At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 258 7e-68
Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 256 2e-67
YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 253 2e-66
YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 252 4e-66
At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 251 6e-66
At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 250 1e-65
At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 245 3e-64
CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 244 7e-64
7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 244 7e-64
CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF compon... 238 5e-62
Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 237 9e-62
Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 236 3e-61
Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF com... 236 3e-61
At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 234 8e-61
At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein 232 4e-60
Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 231 5e-60
CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 228 7e-59
YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small... 226 3e-58
At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 226 3e-58
At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF comp... 221 9e-57
CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein 216 2e-55
Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein 213 1e-54
Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase 213 1e-54
YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein 211 5e-54
Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein 209 3e-53
Hs4557451 [R] KOG0383 Predicted helicase 207 8e-53
SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein 207 1e-52
Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 206 2e-52
Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 206 2e-52
CE03657 [R] KOG0383 Predicted helicase 206 3e-52
Hs20533808 [R] KOG0383 Predicted helicase 205 5e-52
At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 204 7e-52
At2g25170 [R] KOG0383 Predicted helicase 202 2e-51
SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase 202 4e-51
SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein 202 4e-51
CE17716 [R] KOG0383 Predicted helicase 201 7e-51
Hs4557453 [R] KOG0383 Predicted helicase 200 2e-50
7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein 200 2e-50
ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 199 4e-50
At5g44800 [R] KOG0383 Predicted helicase 197 8e-50
CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein 197 1e-49
7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase 193 2e-48
YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase 192 3e-48
Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase 192 3e-48
7293795 [R] KOG0383 Predicted helicase 190 1e-47
Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein 190 2e-47
SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase 187 8e-47
Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein 185 5e-46
Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein 184 1e-45
YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 183 2e-45
SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain... 181 1e-44
SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase 177 1e-43
At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase 174 7e-43
At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-co... 169 4e-41
7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 168 7e-41
CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase 164 8e-40
ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein 162 4e-39
SPBP35G2.10 [R] KOG0383 Predicted helicase 162 5e-39
Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 161 6e-39
Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein 154 1e-36
Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/... 154 1e-36
HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 150 1e-35
Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sm... 150 1e-35
YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 146 2e-34
At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/... 140 2e-32
ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB... 139 3e-32
7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein 139 3e-32
At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/... 138 6e-32
CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-cont... 135 6e-31
SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein C... 134 8e-31
ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-c... 134 1e-30
At4g31900 [R] KOG0383 Predicted helicase 130 2e-29
HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein 129 4e-29
At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/... 124 1e-27
Hs4506397 [L] KOG0390 DNA repair protein SNF2 family 124 1e-27
CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RA... 122 3e-27
7293730 [R] KOG0383 Predicted helicase 122 3e-27
SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family 121 7e-27
Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI sma... 120 2e-26
Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family 119 3e-26
At3g19210 [L] KOG0390 DNA repair protein SNF2 family 116 2e-25
SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF... 107 2e-22
YGL163c [L] KOG0390 DNA repair protein SNF2 family 106 3e-22
SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family 106 3e-22
Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase 106 3e-22
YBR073w [L] KOG0390 DNA repair protein SNF2 family 105 7e-22
SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF... 104 9e-22
At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 104 9e-22
SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16 103 2e-21
At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 103 2e-21
At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 102 6e-21
SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF c... 101 8e-21
At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 100 2e-20
At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 100 2e-20
CE23323 [L] KOG0390 DNA repair protein SNF2 family 99 7e-20
CE25143 [L] KOG0390 DNA repair protein SNF2 family 98 9e-20
7295868 [L] KOG0390 DNA repair protein SNF2 family 98 1e-19
YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16 97 1e-19
SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF... 97 1e-19
CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 97 2e-19
7298963 [KL] KOG4439 RNA polymerase II transcription termination... 95 7e-19
YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 94 1e-18
At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 94 1e-18
At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 93 3e-18
At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16 93 3e-18
Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 93 4e-18
Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 93 4e-18
Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box... 93 4e-18
At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box ... 92 6e-18
7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 91 1e-17
CE11083 [KL] KOG4439 RNA polymerase II transcription termination... 91 2e-17
7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 90 3e-17
At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 89 4e-17
CE14110 [KL] KOG4439 RNA polymerase II transcription termination... 89 5e-17
YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA... 88 9e-17
At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16 87 2e-16
Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily 87 3e-16
Hs19923174 [KL] KOG4439 RNA polymerase II transcription terminat... 87 3e-16
7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 87 3e-16
Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 82 6e-15
7298962 [KL] KOG4439 RNA polymerase II transcription termination... 82 6e-15
At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/D... 81 1e-14
ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 79 4e-14
CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box su... 79 4e-14
SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLT... 79 5e-14
Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 79 5e-14
Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/... 79 5e-14
CE11450 [KL] KOG4439 RNA polymerase II transcription termination... 78 9e-14
At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1... 75 6e-13
CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 74 1e-12
CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 D... 74 1e-12
At3g24340 [L] KOG0390 DNA repair protein SNF2 family 72 5e-12
At1g05480 [L] KOG0390 DNA repair protein SNF2 family 72 7e-12
SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcr... 69 6e-11
Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein 67 2e-10
At3g42670 [L] KOG0390 DNA repair protein SNF2 family 67 3e-10
At5g20420 [L] KOG0390 DNA repair protein SNF2 family 65 8e-10
At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcri... 61 2e-08
Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcr... 60 3e-08
At2g16390 [L] KOG0390 DNA repair protein SNF2 family 58 1e-07
Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL... 57 2e-07
YLR247c [L] KOG0298 DEAD box-containing helicase-like transcript... 55 6e-07
CE26384 [L] KOG0298 DEAD box-containing helicase-like transcript... 54 2e-06
At2g21450 [L] KOG0390 DNA repair protein SNF2 family 54 2e-06
7294816 [KL] KOG1123 RNA polymerase II transcription initiation/... 54 2e-06
>YGL150c [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1489
Score = 1300 bits (3363), Expect = 0.0
Identities = 690/1174 (58%), Positives = 811/1174 (68%), Gaps = 79/1174 (6%)
Query: 374 SYSAISXXXXXXXXXIDSPMPAIQKELRKMAIKSSVAKAMKRKFTNCKVISYSP-ESQLE 432
S S I+ I+S P I +EL KM K+ K KR+FTNC V Y+P +S+L
Sbjct: 313 SLSLITSKKINKNITINSDRPKIVRELIKMCNKNKHQKIKKRRFTNCIVTDYNPIDSKLN 372
Query: 433 IKITLKQLHIRKYKRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQVRRVE--- 489
IKITLKQ H+++ K+ + R++
Sbjct: 373 IKITLKQYHVKRLKKLINDAKREREREEALKNNVGLDGNDLDNDEDGSESHKRRKLNNNT 432
Query: 490 ---------------HDLPTYGMKITLKEARAIQRHYDQTYITIWKDMARRDXXXXXXXX 534
H LPTYGMK+ KEARAIQRHYD TY TIWKDMAR+D
Sbjct: 433 ANGADDANKRKFNTRHGLPTYGMKMNAKEARAIQRHYDNTYTTIWKDMARKDSTKMSRLV 492
Query: 535 XXXXXXXXXNFRKTSSLCAKEARRWQMRNFRQVKDFQTRARRGIREMSSFWXXXXXXXXX 594
NFRKTSSLCA+EA++WQ +NF+Q+KDFQTRARRGIREMS+FW
Sbjct: 493 QQIQSIRSTNFRKTSSLCAREAKKWQSKNFKQIKDFQTRARRGIREMSNFWKKNEREERD 552
Query: 595 XXXXXXXXXXXXXXXXXXXXXNLRAAKKLNFLLTQTELYSHFIGSKIKTNELEGTMTDDS 654
+ R AKKLNFLLTQTELYSHFIG KIKTNELEG ++
Sbjct: 553 LKKKIEKEAMEQAKKEEEEKESKRQAKKLNFLLTQTELYSHFIGRKIKTNELEG----NN 608
Query: 655 LTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNASNALKETQDKARKFD 714
++S + K +D++ A +K + +IDF E+DE+LRL AA+NASNAL ET+ KA++FD
Sbjct: 609 VSSNDSESQKNIDISALAPNKNDFHAIDFDNENDEQLRLRAAENASNALAETRAKAKQFD 668
Query: 715 ------EEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLANLYDQGINGI 768
EE+EE+ ELNFQNPTSLGEITI+QPK+LACTLKEYQLKGLNWLANLYDQGINGI
Sbjct: 669 DHANAHEEEEEEDELNFQNPTSLGEITIEQPKILACTLKEYQLKGLNWLANLYDQGINGI 728
Query: 769 LADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWG 828
LADEMGLGKTVQSISVLAHLA+ +NIWGPF+VVTPASTLHNWVNEIS+F+PQFKILPYWG
Sbjct: 729 LADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWG 788
Query: 829 NANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKS 888
NANDRK LRKFWDRK+LRY ++APFHVMVTSYQMVV+DA+YLQKMKWQYMILDEAQAIKS
Sbjct: 789 NANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKS 848
Query: 889 SQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIES 948
SQSSRWK LLSFHCRNRLLLTGTPIQN+MQELWALLHFIMPSLFDSHDEF++WFSKDIES
Sbjct: 849 SQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIES 908
Query: 949 HAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLK 1008
HAE+NT+LNQ+QLRRLHM+LKPFMLRR+KKNVQSELGDKIEIDVLCDLT RQAKLYQVLK
Sbjct: 909 HAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQVLK 968
Query: 1009 SQVSGGYDAIENAAGNDDVT-------SDQKLVNLVMEFRKVCNHPDLFERADVMSPFSF 1061
SQ+S YDAIENAA ND + SDQ L+N VM+FRKVCNHPDLFERADV SPFSF
Sbjct: 969 SQISTNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDLFERADVDSPFSF 1028
Query: 1062 VSFGESASL---------------------------SREGDFVEVNYSAKNLINYNLPRL 1094
+FG++ S+ G F ++ YS++N I Y+LPRL
Sbjct: 1029 TTFGKTTSMLTASVANNNSSVISNSNMNLSSMSSNNISNGKFTDLIYSSRNPIKYSLPRL 1088
Query: 1095 IYDELVVPNYNNDVDVRAKLLYHTMNIFHPANSFQLCFILSKLT-DTSPNKFATLLEQNV 1153
IY++L++PNYNNDVD+ KL NIF+P+ +++LC LSKLT + S N+F + +
Sbjct: 1089 IYEDLILPNYNNDVDIANKLKNVKFNIFNPSTNYELCLFLSKLTGEPSLNEFFRVSTTPL 1148
Query: 1154 INRAIDLQNDGYFNTAKYSIAYDEGEKIFSSNLLINDKLKYLHLLKNSTSGSVLKNLLEI 1213
+ R I+ N G NT S K + L L + +N+ S V+ +LL +
Sbjct: 1149 LKRVIERTN-GPKNTDSLSF------KTITQEL--------LEVTRNAPSEGVMASLLNV 1193
Query: 1214 PSSVYENEYFNXXXXXXXXXXXXXXINIDVLASNNFVQKKQYEMFNXXXXXXXXXXXXXV 1273
YE EY N + I+VL S++ E+F+
Sbjct: 1194 EKHAYEREYLNCIQRGYHPNVSAPPVTIEVLGSSHVTNSINNELFDPLISQALSDIPAIT 1253
Query: 1274 QHKLIVEKGIPIEELPVTEMAPKAFNNSFTSYIEMPSMDRFITESAXXXXXXXXXXXXXX 1333
Q+ + V+KGIP+E+ P T + P+ N +F+S I MPSMDRFITESA
Sbjct: 1254 QYNMHVKKGIPVEDFPKTGLFPEPLNKNFSSNISMPSMDRFITESAKLRKLDELLVKLKS 1313
Query: 1334 XXHRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLS 1393
HRVLIYFQMTKMMDLMEEYLTYRQY HIRLDGSSKL+DRRDLVHDWQT P+IF+FLLS
Sbjct: 1314 EGHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLS 1373
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLL+RGTIEERMR
Sbjct: 1374 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMR 1433
Query: 1454 DRAKQKEHVQQVVMEGKAKENKQKIIEVEKEHSE 1487
DRAKQKE VQQVVMEGK +E K IEV + SE
Sbjct: 1434 DRAKQKEQVQQVVMEGKTQEKNIKTIEVGENDSE 1467
Score = 77.0 bits (188), Expect = 2e-13
Identities = 86/355 (24%), Positives = 132/355 (36%), Gaps = 77/355 (21%)
Query: 1 MSLEKLLNREENDSS-----------------------------KRTDFMGRWYLKMSKI 31
MSL LLN+E+ D S K+ ++ + + ++I
Sbjct: 1 MSLAVLLNKEDKDISDFSKTTAGKSAKKNSRERVADVAPTRVLDKKQAYLSQLNSEFNRI 60
Query: 32 CERDDREMDYQNWKFLSYQEFELINEWNQQGKELTKDNC--------ERLLVNMDKTHKE 83
RD E YQ+WKF++ QEFELI+EWNQQ K+ DN ++L +M +KE
Sbjct: 61 KRRDSIEQLYQDWKFINLQEFELISEWNQQSKDWQFDNTNDSQDLHFKKLYRDMSMINKE 120
Query: 84 WVEYQKFKEQKDAIIAELKESIQIIKQEPSIPSGADANSVVSSDTEQIQDSETTA---NS 140
W EYQ FK A L + II ++ + D + E +++ E + +
Sbjct: 121 WAEYQSFKN------ANLSD---IINEKDADEDEEDDEDELEDGEEDMEEDEASTGRHTN 171
Query: 141 KKSPAINGIKTSGKSPTKSPATXXXXXXXXXXXXVKRPSNLSKTVRSRNAXXXXXXXXXX 200
KS NGI+ S K + A +K + TV + N
Sbjct: 172 GKSMRGNGIQKSRKKDAAAAA--------AIGKAIKDDQTHADTVVTVNGDENEDGNNGE 223
Query: 201 XXXXXXXPKRRSRPKKILVSNVSKDVDAEEEDDIHTEKDASGSAADLDK----------D 250
+ + + D D ++E++ E + DLD+ D
Sbjct: 224 DEDNDNDNENNNDNDNDNENENDNDSDNDDEEENGEEDEEEEEIEDLDEEDFAAFEEQDD 283
Query: 251 IVDESINDSENAPRKRPVSST----------SLLSRNKSNKPTKSSPLTPDSARE 295
DE N RKR SS+ SL++ K NK + P RE
Sbjct: 284 NDDEDFNPDVEKRRKRSSSSSSSTKLSMNSLSLITSKKINKNITINSDRPKIVRE 338
>SPAC3G6.12 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1063
Score = 498 bits (1281), Expect = e-140
Identities = 246/458 (53%), Positives = 313/458 (67%), Gaps = 32/458 (6%)
Query: 520 KDMARRDXXXXXXXXXXXXXXXXXNFRKTSSLCAKEARRWQMRNFRQVKDFQTRARRGIR 579
K++AR++ N RKTS LC +EARRWQ R + KD QT+A+R +R
Sbjct: 628 KEIARKEIPRVYKIIQQNQYNRSTNARKTSQLCGREARRWQFRTIKNNKDMQTKAKRAMR 687
Query: 580 EMSSFWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRAAKKLNFLLTQTELYSHFIGS 639
E FW + R A+KL+FL+TQTELYSHF+G
Sbjct: 688 ETMVFWKRNERVERDLRKKAEREALDRAKKEEELRESRRQARKLDFLITQTELYSHFVGR 747
Query: 640 KIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNA 699
K+ + DL +A + +V I+F ++++E +R +A ++A
Sbjct: 748 KMDREQ---------------------DLP-SATNTASVSEINFDSDEEEDIRRLAVESA 785
Query: 700 SNALKETQDKARKFD----------EEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEY 749
A+++ ++ ++ FD D +GE+NFQNPT + + QPKML C LKEY
Sbjct: 786 QEAVQKAREHSQLFDANRQQSPNNSSSDMNEGEMNFQNPTLVNAFEVKQPKMLMCKLKEY 845
Query: 750 QLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHN 809
QLKGLNWLANLY+QGINGILADEMGLGKTVQSISV+A+LA+ +NIWGPF+V+ PASTLHN
Sbjct: 846 QLKGLNWLANLYEQGINGILADEMGLGKTVQSISVMAYLAETHNIWGPFLVIAPASTLHN 905
Query: 810 WVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASY 869
W EI+RFVP+ K +PYWG+ DRK LRKFW RK++ Y ++PFHV+VTSYQ+VV DA Y
Sbjct: 906 WQQEITRFVPKLKCIPYWGSTKDRKILRKFWCRKNMTYDENSPFHVVVTSYQLVVLDAQY 965
Query: 870 LQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMP 929
Q +KWQYMILDEAQAIKSS SSRWK+LL+F CRNRLLLTGTPIQN MQELWALLHFIMP
Sbjct: 966 FQSVKWQYMILDEAQAIKSSSSSRWKSLLAFKCRNRLLLTGTPIQNTMQELWALLHFIMP 1025
Query: 930 SLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMV 967
SLFDSH+EFS+WFSKDIESHA+SNT+LN++QL+RLHM+
Sbjct: 1026 SLFDSHNEFSEWFSKDIESHAQSNTQLNEQQLKRLHMI 1063
>At3g57300 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1496
Score = 465 bits (1196), Expect = e-130
Identities = 263/602 (43%), Positives = 361/602 (59%), Gaps = 33/602 (5%)
Query: 519 WKDMARRDXXXXXXXXXXXXXXXXXNFRKTSSLCAKEARRWQMRNFRQVKDFQTRARRGI 578
W ++ RRD + ++ + C +E R R+++ + R R+
Sbjct: 351 WINIVRRDIAKHHRIFTTFHRKLSIDAKRFADGCQREVRMKVGRSYKIPRTAPIRTRKIS 410
Query: 579 REMSSFWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRAAKKLNFLLTQTELYSHFIG 638
R+M FW + R ++LNFL+ QTELYSHF+
Sbjct: 411 RDMLLFWKRYDKQMAEERKKQEKEAAEAFKREQEQRESKRQQQRLNFLIKQTELYSHFMQ 470
Query: 639 SKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQN 698
+K +N E D N ++V+ T +AA + VE + A ++ LR AAQ+
Sbjct: 471 NKTDSNPSEALPIGDE-----NPIDEVLPET-SAAEPSEVEDPEEAELKEKVLR--AAQD 522
Query: 699 ASNALKETQD----KARKFDEEDEEDGELN-----------FQNPTSLGEI-TIDQPKML 742
A + K+ D + K + E +G LN NP+++ T+ P++
Sbjct: 523 AVSKQKQITDAFDTEYMKLRQTSEMEGPLNDISVSGSSNIDLHNPSTMPVTSTVQTPELF 582
Query: 743 ACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVT 802
TLKEYQ+KGL WL N Y+QG+NGILADEMGLGKT+Q+++ LAHLA+ NIWGPF+VV
Sbjct: 583 KGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVA 642
Query: 803 PASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQM 862
PAS L+NW +EISRF P K LPYWG +R LRK + K + Y RDA FH+++TSYQ+
Sbjct: 643 PASVLNNWADEISRFCPDLKTLPYWGGLQERTILRKNINPKRM-YRRDAGFHILITSYQL 701
Query: 863 VVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWA 922
+V+D Y +++KWQYM+LDEAQAIKSS S RWKTLLSF+CRNRLLLTGTPIQNNM ELWA
Sbjct: 702 LVTDEKYFRRVKWQYMVLDEAQAIKSSSSIRWKTLLSFNCRNRLLLTGTPIQNNMAELWA 761
Query: 923 LLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQS 982
LLHFIMP LFD+HD+F++WFSK IE+HAE LN+ QL RLH +LKPFMLRR+KK+V S
Sbjct: 762 LLHFIMPMLFDNHDQFNEWFSKGIENHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVS 821
Query: 983 ELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQK---LVNLVME 1039
EL K E+ V C L+ RQ YQ +K+++S E N +D+K L+N+V++
Sbjct: 822 ELTTKTEVTVHCKLSSRQQAFYQAIKNKIS----LAELFDSNRGQFTDKKVLNLMNIVIQ 877
Query: 1040 FRKVCNHPDLFERADVMSPFSFVSFGESASLSREGDFVEVNYS-AKNLINYNLPRLIYDE 1098
RKVCNHP+LFER + S F S G+ +V+YS +N I Y +P+L++ E
Sbjct: 878 LRKVCNHPELFERNEGSSYLYFGVTSNSLLPHPFGELEDVHYSGGQNPIIYKIPKLLHQE 937
Query: 1099 LV 1100
++
Sbjct: 938 VL 939
Score = 185 bits (469), Expect = 5e-46
Identities = 98/185 (52%), Positives = 126/185 (67%), Gaps = 11/185 (5%)
Query: 1287 ELPVTEMAPKAFNNSFTSYIEMPSMD--RFITESAXXXXXXXXXXXXXXXXHRVLIYFQM 1344
ELPV + A + + F S M S D + +T+S HRVL++ QM
Sbjct: 1172 ELPVVQPALQLTHRIFGSCPPMQSFDPAKLLTDSGKLQTLDILLKRLRAGNHRVLLFAQM 1231
Query: 1345 TKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGGLGINLT 1404
TKM++++E+Y+ YR+Y ++RLDGSS + DRRD+V D+Q + DIF+FLLSTRAGGLGINLT
Sbjct: 1232 TKMLNILEDYMNYRKYKYLRLDGSSTIMDRRDMVRDFQHRSDIFVFLLSTRAGGLGINLT 1291
Query: 1405 AADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQ 1464
AADTVIFY+SDWNPT+D QAMDRAHRLGQT+ TV EE++ RA QK VQQ
Sbjct: 1292 AADTVIFYESDWNPTLDLQAMDRAHRLGQTKDETV---------EEKILHRASQKNTVQQ 1342
Query: 1465 VVMEG 1469
+VM G
Sbjct: 1343 LVMTG 1347
>7300511 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 1477
Score = 459 bits (1182), Expect = e-128
Identities = 264/615 (42%), Positives = 360/615 (57%), Gaps = 79/615 (12%)
Query: 518 IWKDMARRDXXXXXXXXXXXXXXXXXNFRKTSSLCAKEARRWQMRNFRQVKDFQTRARRG 577
IW+ M++++ N ++ + +CAK R+ + + R +K+ RA+R
Sbjct: 313 IWQIMSKKESGRLQRIKSNNHKEMLANCKRVAGMCAKVVRQRAINSQRIMKETVWRAKRL 372
Query: 578 IREMSSFWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNLRAAKKLNFLLTQTELYSHFI 637
REM ++W R +KLNFL+TQTELY+HF+
Sbjct: 373 TREMLAYWKRYERVERDQRRKQEREAEEQRKQDVELIEVKRQQRKLNFLITQTELYAHFM 432
Query: 638 GSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQ 697
K+ E D L +S +TN D +++L+A +
Sbjct: 433 SKKLGQGSEE-----DQLRILSQ-----------LDEETNARLAAQDDYDAGEMKLLAQE 476
Query: 698 NASNALKETQDKARKFD-------EEDEEDGELNFQN--PTSLGEIT-IDQPKMLACTLK 747
NA A++ DK R FD +E+EE + + ++ P E+ + QPKM TLK
Sbjct: 477 NAEAAMQRDLDKTRAFDVFAKKKEKEEEEQAQESVEDIKPEPRPEMKDLPQPKMFKGTLK 536
Query: 748 EYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTL 807
YQ+KG+ WLAN+YDQGI+GILADEMGLGKTVQSI+ L H+A+ Y +
Sbjct: 537 GYQIKGMTWLANIYDQGISGILADEMGLGKTVQSIAFLCHIAEHYGV------------- 583
Query: 808 HNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDA 867
FVP FK++PYWG+ +RK LR+FWD+KHL + RDA FHV++TSYQ+VVSD
Sbjct: 584 ---------FVPDFKVVPYWGSPAERKILRQFWDQKHL-HTRDASFHVVITSYQLVVSDY 633
Query: 868 SYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFI 927
Y ++KWQYM+LDEAQAIKS+ S RWK LL F CRNRLLL+GTPIQN+M ELWALLHFI
Sbjct: 634 KYFNRIKWQYMVLDEAQAIKSAASQRWKLLLGFSCRNRLLLSGTPIQNSMAELWALLHFI 693
Query: 928 MPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDK 987
MP+LFDSHDEF++WFSKDIESHAE+ T ++++Q+ RLHM+LKPFMLRRIKK+V++EL DK
Sbjct: 694 MPTLFDSHDEFNEWFSKDIESHAENKTGIDEKQISRLHMILKPFMLRRIKKDVENELSDK 753
Query: 988 IEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSD---QKLVNLVMEFRKVC 1044
IEI V C LT RQ LY+ LK ++ D + +G+ +S L+NLVM+FRKVC
Sbjct: 754 IEIMVYCPLTIRQKLLYRALKQKIR-IEDLLHLTSGSTTTSSSSSASNLMNLVMQFRKVC 812
Query: 1045 NHPDLFERADVMSPFSFVSFGESASLSREGDFVEVNYSAKNLINYNLPRLIYDELVVPNY 1104
NHP+LFER D SPF F+ E Y +PRLI++E ++
Sbjct: 813 NHPELFERRDARSPF-FMRCAE----------------------YTIPRLIHEEGLI--- 846
Query: 1105 NNDVDVRAKLLYHTM 1119
+ + R LLY+ +
Sbjct: 847 HRMLPSRKHLLYNRL 861
Score = 116 bits (291), Expect = 2e-25
Identities = 58/106 (54%), Positives = 76/106 (70%)
Query: 1304 SYIEMPSMDRFITESAXXXXXXXXXXXXXXXXHRVLIYFQMTKMMDLMEEYLTYRQYTHI 1363
S I +P + IT++ HRVLIY QMTKM+DL+EEY+ +R++ ++
Sbjct: 1072 SSIVVPDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYM 1131
Query: 1364 RLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGGLGINLTAADTV 1409
RLDGSSK+ RRD+V D+QT+ DIF+FLLSTRAGGLGINLTAADT+
Sbjct: 1132 RLDGSSKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTL 1177
>ECU09g1890 [L] KOG0388 SNF2 family DNA-dependent ATPase
Length = 883
Score = 374 bits (961), Expect = e-103
Identities = 226/534 (42%), Positives = 302/534 (56%), Gaps = 77/534 (14%)
Query: 546 RKTSSLCAKEARRWQMRNFRQVKDFQTRARRGIREMSSFWXXXXXXXXXXXXXXXXXXXX 605
+K S +CA+E RR + R +++R RE+
Sbjct: 110 KKISIICARELRRGLSKTSRTNPIL--KSKRIYRELYGHIKKTERNMKDRFKKAEKEEME 167
Query: 606 XXXXXXXXXXNLRAAKKLNFLLTQTELYSHFIGSKIKTNELEGTMTDDSLTSMSNNKNKV 665
LR +K +LL+QTEL+SHFI +K N L+S + K
Sbjct: 168 RKKREMEEREELRQKRKFEYLLSQTELFSHFI---LKKNRC-------GLSSAEEAERKE 217
Query: 666 VDLTKTAASKTNVESIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNF 725
+ A ++ + A E+LR A+ ++ KE GE+
Sbjct: 218 IG----AGEYNGMKGYEAAMLQKERLREFGAERSTKKFKE--------------GGEV-- 257
Query: 726 QNPTSLGEIT---IDQPKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSI 782
GE T + QP +L CTLKEYQL+GLNWL +LYD+GINGILAD+MGLGKTVQSI
Sbjct: 258 ------GETTTRYVPQPSILKCTLKEYQLRGLNWLVSLYDKGINGILADDMGLGKTVQSI 311
Query: 783 SVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDR 842
S+LAHL + + GPF+VVT +STL NW E +RF+P F++ + G+ ++RK L+K +
Sbjct: 312 SLLAHLYETEEVPGPFLVVTISSTLDNWAQEFARFLPSFRVCRFSGSPSERKELKKRFKN 371
Query: 843 KHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHC 902
V++T+YQ VSD L+K+KWQYMILDEAQAIKSS S RWKTLLSF
Sbjct: 372 SD----------VVITTYQTAVSDEKMLKKIKWQYMILDEAQAIKSSMSRRWKTLLSFKA 421
Query: 903 RNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLR 962
RNRLLLTGTPIQN+MQELWALLHFIMP+LFDS +EFSDWFSK+IE+ A ++++ L+
Sbjct: 422 RNRLLLTGTPIQNSMQELWALLHFIMPTLFDSLNEFSDWFSKEIETSAIMKKTVDEKSLQ 481
Query: 963 RLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAA 1022
RLH +LKPFMLRR K +V ELG K +ID+ CDL++RQ LY+ +
Sbjct: 482 RLHAILKPFMLRRHKSDVIHELGQKTQIDLYCDLSYRQKVLYKEITRS------------ 529
Query: 1023 GNDDVTSDQKLVNLVMEFRKVCNHPDLFERADVMSPFSF---------VSFGES 1067
S ++ NL+M+ +KVCNHPDLF++ + S VSFG S
Sbjct: 530 -----CSSMEMENLLMQLKKVCNHPDLFKKLEPRCGLSLEVSDGIGDVVSFGRS 578
Score = 195 bits (495), Expect = 5e-49
Identities = 99/201 (49%), Positives = 132/201 (65%), Gaps = 15/201 (7%)
Query: 1289 PVTEMAPKAFNNS--------------FTSYIEMPSMDRFITESAXXXXXXXXXXXXXXX 1334
PV AP+ +N + I +P ++ FI++S
Sbjct: 682 PVVATAPRLISNEADLPEIDLENRHIPLNTTIYVPPLNTFISDSGKLVVLDELLPKLKAE 741
Query: 1335 XHRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLST 1394
HR+L+YFQMT+M+DL+E+YL + YT++RLDGS K R +++ DWQ D FIFLLST
Sbjct: 742 GHRLLMYFQMTRMIDLIEDYLVRKGYTYLRLDGSLKASARAEVIRDWQAS-DKFIFLLST 800
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINLTAADTV+FYDSDWNPT D QAMDRAHRLGQTR VTVYRL+ RGT+EE++ +
Sbjct: 801 RAGGLGINLTAADTVVFYDSDWNPTADQQAMDRAHRLGQTRDVTVYRLITRGTVEEKVLE 860
Query: 1455 RAKQKEHVQQVVMEGKAKENK 1475
A +K+ +Q++V+ G E +
Sbjct: 861 SANRKDEIQKMVIHGNIFEGE 881
>At3g12810 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1048
Score = 303 bits (776), Expect = 1e-81
Identities = 172/468 (36%), Positives = 263/468 (55%), Gaps = 53/468 (11%)
Query: 636 FIGSKIKTNELEGT--MTDDSLTSMSNNKNKV------VDLTKTAAS----KTNVE-SID 682
F G I +E E + +++DS+ N+ + VDLT+ NVE +
Sbjct: 14 FGGKDISEDESESSFAVSEDSIVDSDENRQQADLDDDNVDLTECKLDPEPCSENVEGTFH 73
Query: 683 FATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKML 742
ED++K +A+ A + Q + S ++ P +L
Sbjct: 74 EVAEDNDKDSSDKIADAAAAARSAQPTGFTY----------------STTKVRTKLPFLL 117
Query: 743 ACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVT 802
+L+EYQ GL+WL +Y++ +NGILADEMGLGKT+ +I++LAHLA IWGP ++V
Sbjct: 118 KHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALLAHLACDKGIWGPHLIVV 177
Query: 803 PASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQM 862
P S + NW E ++ P FKIL Y+G+A +RK R+ W + + FHV +T+Y++
Sbjct: 178 PTSVMLNWETEFLKWCPAFKILTYFGSAKERKLKRQGWMKLN-------SFHVCITTYRL 230
Query: 863 VVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWA 922
V+ D+ ++ KW+Y+ILDEA IK+ +S RW+TLL+F+ + R+LLTGTP+QN++ ELW+
Sbjct: 231 VIQDSKMFKRKKWKYLILDEAHLIKNWKSQRWQTLLNFNSKRRILLTGTPLQNDLMELWS 290
Query: 923 LLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQS 982
L+HF+MP +F SH EF DWF I E ++N+E + RLH VL+PF+LRR+K++V+
Sbjct: 291 LMHFLMPHVFQSHQEFKDWFCNPIAGMVEGQEKINKEVIDRLHNVLRPFLLRRLKRDVEK 350
Query: 983 ELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQ--KLVNLVMEF 1040
+L K E + C L+ RQ LY+ D I + +TS +++++M+
Sbjct: 351 QLPSKHEHVIFCRLSKRQRNLYE----------DFIASTETQATLTSGSFFGMISIIMQL 400
Query: 1041 RKVCNHPDLFERADVMSPFSFVSF-----GESASLSREGDFVEVNYSA 1083
RKVCNHPDLFE ++S F SL E F +V+ A
Sbjct: 401 RKVCNHPDLFEGRPIVSSFDMAGIDVQLSSTICSLLLESPFSKVDLEA 448
Score = 157 bits (396), Expect = 2e-37
Identities = 71/133 (53%), Positives = 100/133 (74%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
HR LI+ QMTKM+D++E ++ YT++RLDGS+ ++R+ L+ + T P IF+F+LSTR
Sbjct: 677 HRALIFTQMTKMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTR 736
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
+GG+GINL ADTVIFYDSDWNP +D QA DR HR+GQTR+V +YRL+ TIEE + +
Sbjct: 737 SGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYRLISESTIEENILKK 796
Query: 1456 AKQKEHVQQVVME 1468
A QK + +V++
Sbjct: 797 ANQKRVLDNLVIQ 809
>CE25717 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1933
Score = 301 bits (772), Expect = 4e-81
Identities = 149/321 (46%), Positives = 210/321 (65%), Gaps = 15/321 (4%)
Query: 739 PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPF 798
P ++ L+EYQ+ GL+W+ LY++ +NGILADEMGLGKT+Q+IS+LAH+A +IWGP
Sbjct: 590 PFLIRGQLREYQMVGLDWMVTLYEKNLNGILADEMGLGKTIQTISLLAHMACSESIWGPH 649
Query: 799 IVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVT 858
++V P S + NW E ++ P KIL Y+G A +R RK W + + FHV +T
Sbjct: 650 LIVVPTSVILNWEMEFKKWCPALKILTYFGTAKERAEKRKGWMKPNC-------FHVCIT 702
Query: 859 SYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQ 918
SY+ V D ++ WQY+ILDEAQ IK+ +S RW+ LL+ R RLLLTGTP+QN++
Sbjct: 703 SYKTVTQDIRAFKQRAWQYLILDEAQNIKNWKSQRWQALLNVRARRRLLLTGTPLQNSLM 762
Query: 919 ELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKK 978
ELW+L+HF+MP++F SHD+F DWFS + E N E N + RLH VL+PF+LRR+KK
Sbjct: 763 ELWSLMHFLMPTIFSSHDDFKDWFSNPLTGMMEGNMEFNAPLIGRLHKVLRPFILRRLKK 822
Query: 979 NVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVM 1038
V+ +L +K E V C L+ RQ LY S+ S EN + ++ ++N+VM
Sbjct: 823 EVEKQLPEKTEHIVNCSLSKRQRYLYDDFMSRRS----TKENLKSGNMMS----VLNIVM 874
Query: 1039 EFRKVCNHPDLFERADVMSPF 1059
+ RK CNHP+LFE V++PF
Sbjct: 875 QLRKCCNHPNLFEPRPVVAPF 895
Score = 150 bits (380), Expect = 1e-35
Identities = 65/133 (48%), Positives = 101/133 (75%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
HR LI+ QM+KM+D+++ +L++ Y + RLDG++ ++ R+ ++ + P +F F+LSTR
Sbjct: 1256 HRCLIFTQMSKMLDVLQTFLSHHGYQYFRLDGTTGVEQRQAMMERFNADPKVFCFILSTR 1315
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
+GG+G+NLT ADTVIFYDSDWNPT+D+QA DR HR+GQTR V++YRL+ TIEE + +
Sbjct: 1316 SGGVGVNLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRNVSIYRLISERTIEENILRK 1375
Query: 1456 AKQKEHVQQVVME 1468
A QK + ++ ++
Sbjct: 1376 ATQKRRLGELAID 1388
>Hs5730067 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 2971
Score = 293 bits (751), Expect = 1e-78
Identities = 143/321 (44%), Positives = 212/321 (65%), Gaps = 15/321 (4%)
Query: 739 PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPF 798
P +L L+EYQ GL+WL +Y++ +NGILADEMGLGKT+Q+IS+LAHLA WGP
Sbjct: 414 PLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIQTISLLAHLACEKGNWGPH 473
Query: 799 IVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVT 858
+++ P S + NW E+ R+ P FKIL Y+G +RK R+ W + + FHV +T
Sbjct: 474 LIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQGWTKPNA-------FHVCIT 526
Query: 859 SYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQ 918
SY++V+ D ++ W+Y+ILDEAQ IK+ +S RW++LL+F+ + RLLLTGTP+QN++
Sbjct: 527 SYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRRLLLTGTPLQNSLM 586
Query: 919 ELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKK 978
ELW+L+HF+MP +F SH EF +WFS + E + E N+ ++RLH VL+PF+LRR+K
Sbjct: 587 ELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLHKVLRPFLLRRVKV 646
Query: 979 NVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVM 1038
+V+ ++ K E + C L+ RQ LY +Q + E A ++ ++N++M
Sbjct: 647 DVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTT----TKETLATGHFMS----VINILM 698
Query: 1039 EFRKVCNHPDLFERADVMSPF 1059
+ RKVCNHP+LF+ V SPF
Sbjct: 699 QLRKVCNHPNLFDPRPVTSPF 719
Score = 159 bits (401), Expect = 4e-38
Identities = 70/134 (52%), Positives = 103/134 (76%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
HRVLI+ QMT+M+D++E++LTY + ++RLDGS++++ R+ L+ + IF F+LSTR
Sbjct: 1801 HRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTR 1860
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
+GG+G+NLT ADTV+FYDSDWNPT+D+QA DR HR+GQTR V +YRL+ T+EE + +
Sbjct: 1861 SGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRLISERTVEENILKK 1920
Query: 1456 AKQKEHVQQVVMEG 1469
A QK + + +EG
Sbjct: 1921 ANQKRMLGDMAIEG 1934
>YDR334w [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 1514
Score = 285 bits (730), Expect = 3e-76
Identities = 156/368 (42%), Positives = 222/368 (59%), Gaps = 30/368 (8%)
Query: 706 TQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLANLYDQGI 765
TQ++ R ++ EED E Q L + + P +L L+ YQ +GLNWLA+LY+
Sbjct: 657 TQNENRDDIKDVEEDAETKVQEE-QLSVVDVPVPSLLRGNLRTYQKQGLNWLASLYNNHT 715
Query: 766 NGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILP 825
NGILADEMGLGKT+Q+IS+LA+LA WGP ++V P S L NW E RF P FK+L
Sbjct: 716 NGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLT 775
Query: 826 YWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQA 885
Y+G+ RK RK W++ DA FHV + SYQ+VV D ++ +WQYM+LDEA
Sbjct: 776 YYGSPQQRKEKRKGWNKP------DA-FHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHN 828
Query: 886 IKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMP---------SLFDSHD 936
IK+ +S+RW+ LL+F+ + RLLLTGTP+QNN+ ELW+LL+F+MP S F D
Sbjct: 829 IKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLD 888
Query: 937 EFSDWFSKDIESHAESNTELNQEQ-----LRRLHMVLKPFMLRRIKKNVQSELGDKIEID 991
F WF + ++ E+ Q++ + +LH VL+P++LRR+K +V+ ++ K E
Sbjct: 889 AFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHI 948
Query: 992 VLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFE 1051
V C L+ RQ LY S+ A+GN +VN +M+ RKVCNHP+LFE
Sbjct: 949 VYCKLSKRQRFLYDDFMSRAQ---TKATLASGN-----FMSIVNCLMQLRKVCNHPNLFE 1000
Query: 1052 RADVMSPF 1059
+++ F
Sbjct: 1001 VRPILTSF 1008
Score = 152 bits (385), Expect = 3e-36
Identities = 69/133 (51%), Positives = 97/133 (72%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
HR LI+ QMTK++D++E++L Y Y ++RLDG++K++DR+ L + T I +F+LS+R
Sbjct: 1263 HRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSR 1322
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
+GGLGINLT ADTVIFYDSDWNP +D Q DR HR+GQTR V +YR + TIE + +
Sbjct: 1323 SGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKK 1382
Query: 1456 AKQKEHVQQVVME 1468
A QK + VV++
Sbjct: 1383 ANQKRQLDNVVIQ 1395
>Hs21071044 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1054
Score = 265 bits (676), Expect = 5e-70
Identities = 160/442 (36%), Positives = 244/442 (55%), Gaps = 58/442 (13%)
Query: 620 AKKLNFLLTQTELYSHFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVE 679
AK+ FLL QTEL++HFI + K+ S N++
Sbjct: 92 AKRFEFLLKQTELFAHFIQPSAQ---------------------------KSPTSPLNMK 124
Query: 680 SIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQP 739
+ DEK L++A + + E EEDEE + + +
Sbjct: 125 LGRPRIKKDEKQSLISAGDYRHRRTE--------QEEDEELLSESRKTSNVCIRFEVSPS 176
Query: 740 KMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFI 799
+ L++YQ++GLNWL +LY+ G+NGILADEMGLGKT+Q+I++L +L NI GP +
Sbjct: 177 YVKGGPLRDYQIRGLNWLISLYENGVNGILADEMGLGKTLQTIALLGYLKHYRNIPGPHM 236
Query: 800 VVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTS 859
V+ P STLHNW+NE R+VP +++ + G+ K R + R + G + V VTS
Sbjct: 237 VLVPKSTLHNWMNEFKRWVPSLRVICFVGD----KDARAAFIRDEMMPGE---WDVCVTS 289
Query: 860 YQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQE 919
Y+MV+ + S +K W+Y+++DEA IK+ +S + + F NRLLLTGTP+QNN+ E
Sbjct: 290 YEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHE 349
Query: 920 LWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKN 979
LWALL+F++P +F+S D+F WF N +Q+ + RLH VLKPF+LRRIK +
Sbjct: 350 LWALLNFLLPDVFNSADDFDSWFD-------TKNCLGDQKLVERLHAVLKPFLLRRIKTD 402
Query: 980 VQSELGDKIEIDVLCDLTFRQAKLY-QVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVM 1038
V+ L K EI + L+ Q + Y ++L + + N++G D +L+N++M
Sbjct: 403 VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSSGKMD---KMRLLNILM 454
Query: 1039 EFRKVCNHPDLFERADVMSPFS 1060
+ RK CNHP LF+ A+ P++
Sbjct: 455 QLRKCCNHPYLFDGAEPGPPYT 476
Score = 134 bits (336), Expect = 1e-30
Identities = 67/145 (46%), Positives = 96/145 (66%), Gaps = 13/145 (8%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQ-------------T 1383
RVLI+ QMT+++D++E+Y +R Y + RLDG + ++R D + +
Sbjct: 504 RVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAP 563
Query: 1384 KPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLL 1443
FIF+LSTRAGGLGINL +AD VI YDSDWNP +D QAMDRAHR+GQ + V V+RL+
Sbjct: 564 NSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLI 623
Query: 1444 IRGTIEERMRDRAKQKEHVQQVVME 1468
T+EER+ +RA+ K + +V++
Sbjct: 624 TDNTVEERIVERAEIKLRLDSIVIQ 648
>SPAC1250.01 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1199
Score = 262 bits (669), Expect = 3e-69
Identities = 146/369 (39%), Positives = 226/369 (60%), Gaps = 25/369 (6%)
Query: 691 LRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPT-SLGEITIDQPKMLAC-TLKE 748
+++ +Q +A E D R+ + ED D ++++ N ++ E+ +QP +L LKE
Sbjct: 364 VKVQQSQFGESAYDEDMD--RRMNPED--DRKIDYYNVAHNIREVVTEQPSILVGGKLKE 419
Query: 749 YQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLH 808
YQL+GL W+ +LY+ +NGILADEMGLGKT+Q+IS++ HL ++ GPF+V+ P STL
Sbjct: 420 YQLRGLQWMISLYNNHLNGILADEMGLGKTIQTISLITHLIEKKRQNGPFLVIVPLSTLT 479
Query: 809 NWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDAS 868
NW E R+ P + Y G RK L R + F V++T+Y+ ++ D
Sbjct: 480 NWTMEFERWAPSIVKIVYKGPPQVRKALHP--------QVRHSNFQVLLTTYEYIIKDRP 531
Query: 869 YLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFH-CRNRLLLTGTPIQNNMQELWALLHFI 927
L ++KW YMI+DE +K++QS TL +++ R RL+LTGTP+QNN+ ELWALL+F+
Sbjct: 532 LLSRIKWIYMIIDEGHRMKNTQSKLTNTLTTYYSSRYRLILTGTPLQNNLPELWALLNFV 591
Query: 928 MPSLFDSHDEFSDWFSKDI-ESHAESNTELNQEQ----LRRLHMVLKPFMLRRIKKNVQS 982
+P +F+S F +WF+ + + EL +E+ +RRLH VL+PF+LRR+KK+V++
Sbjct: 592 LPRIFNSIKSFDEWFNTPFANTGGQDKMELTEEESLLVIRRLHKVLRPFLLRRLKKDVEA 651
Query: 983 ELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRK 1042
EL DK+E + C ++ Q KLY +K G +E+A T + L N VM+ +K
Sbjct: 652 ELPDKVEKVIRCQMSGLQQKLYYQMKKH---GMLYVEDAKRGK--TGIKGLQNTVMQLKK 706
Query: 1043 VCNHPDLFE 1051
+CNHP +FE
Sbjct: 707 ICNHPFVFE 715
Score = 149 bits (377), Expect = 3e-35
Identities = 72/141 (51%), Positives = 104/141 (73%), Gaps = 1/141 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKP-DIFIFLLST 1394
HR+L++FQMT++M++ME+YL YRQ+ ++RLDGS+K DDR L+ + ++ +FLLST
Sbjct: 753 HRILMFFQMTQIMNIMEDYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLST 812
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQT++V +YRL+ ++EE +
Sbjct: 813 RAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRIGQTKEVRIYRLITEKSVEENILA 872
Query: 1455 RAKQKEHVQQVVMEGKAKENK 1475
RA+ K + V++ +NK
Sbjct: 873 RAQYKLDIDGKVIQAGKFDNK 893
>7294205 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1638
Score = 261 bits (668), Expect = 5e-69
Identities = 147/386 (38%), Positives = 230/386 (59%), Gaps = 19/386 (4%)
Query: 675 KTNVESIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEI 734
K VE ATED + A N +A K+ KA+ D+E + + + ++ E
Sbjct: 703 KPKVEEQPTATEDATD-KAQATGNDEDA-KDLITKAKVEDDEYRTEEQTYYSIAHTIHEK 760
Query: 735 TIDQPK-MLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYN 793
++Q M+ TLKEYQ+KGL WL +LY+ +NGILADEMGLGKT+Q+IS++ +L DR
Sbjct: 761 VVEQASIMVNGTLKEYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTISLVTYLMDRKK 820
Query: 794 IWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPF 853
+ GP++++ P STL NWV E ++ P ++ Y G+ R+ L+ R F
Sbjct: 821 VMGPYLIIVPLSTLPNWVLEFEKWAPAVGVVSYKGSPQGRRLLQ--------NQMRATKF 872
Query: 854 HVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFH-CRNRLLLTGTP 912
+V++T+Y+ V+ D + L K++W+YMI+DE +K+ + L + + RLLLTGTP
Sbjct: 873 NVLLTTYEYVIKDKAVLAKIQWKYMIIDEGHRMKNHHCKLTQVLNTHYIAPYRLLLTGTP 932
Query: 913 IQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ----LRRLHMVL 968
+QN + ELWALL+F++PS+F S F WF+ + E ELN+E+ +RRLH VL
Sbjct: 933 LQNKLPELWALLNFLLPSIFKSCSTFEQWFNAPFATTGE-KVELNEEETILIIRRLHKVL 991
Query: 969 KPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVT 1028
+PF+LRR+KK V+ +L DK+E + CD++ Q LY+ ++S+ D E G
Sbjct: 992 RPFLLRRLKKEVEHQLPDKVEYIIKCDMSALQRVLYKHMQSKGVLLTDGSEK--GKHGKG 1049
Query: 1029 SDQKLVNLVMEFRKVCNHPDLFERAD 1054
+ L+N +++ RK+CNHP +F+ +
Sbjct: 1050 GAKALMNTIVQLRKLCNHPFMFQHIE 1075
Score = 142 bits (359), Expect = 3e-33
Identities = 68/141 (48%), Positives = 102/141 (72%), Gaps = 1/141 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVL++ QMT+ M ++E+YL +RQ+ ++RLDG++K +DR +L+ + K D+F+FLLST
Sbjct: 1115 HRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELLRKFNAKGSDVFVFLLST 1174
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLG+NL ADTV+ +DSDWNP D QA DRAHR+GQ +V V RL+ ++EER+
Sbjct: 1175 RAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEVRVLRLMTVNSVEERILA 1234
Query: 1455 RAKQKEHVQQVVMEGKAKENK 1475
A+ K ++ + V++ + K
Sbjct: 1235 AARYKLNMDEKVIQAGMFDQK 1255
>YOR304w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1120
Score = 258 bits (660), Expect = 4e-68
Identities = 155/442 (35%), Positives = 248/442 (56%), Gaps = 52/442 (11%)
Query: 621 KKLNFLLTQTELYSHFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVES 680
K+ +LL T+L+ HFIG K K ++ L + ++ NK+ T +S +
Sbjct: 89 KRFKYLLGVTDLFRHFIGIKAKHDK----NIQKLLKQLDSDANKLSKSHSTVSSSSRHHR 144
Query: 681 IDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPK 740
TE +E LMA ++EE+ +Q + E P
Sbjct: 145 ---KTEKEEDAELMA--------------------DEEEEIVDTYQEDIFVSE----SPS 177
Query: 741 MLAC-TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFI 799
+ L++YQ++GLNWL +L++ ++GILADEMGLGKT+Q+IS L +L I GPF+
Sbjct: 178 FVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFL 237
Query: 800 VVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTS 859
++ P STL NW E ++ P +L G+ + R + + +A F V++TS
Sbjct: 238 IIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVR-------NIILEARFDVLITS 290
Query: 860 YQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQE 919
Y+MV+ + + L+++ WQY+++DEA IK+ QS+ + + F+ +NRLL+TGTP+QNN+ E
Sbjct: 291 YEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHE 350
Query: 920 LWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQE-QLRRLHMVLKPFMLRRIKK 978
LWALL+F++P +F + F +WF ++N+E +QE +++LH VL PF+LRR+K
Sbjct: 351 LWALLNFLLPDIFGDSELFDEWFE-------QNNSEQDQEIVIQQLHSVLNPFLLRRVKA 403
Query: 979 NVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVM 1038
+V+ L KIE +V +T Q + Y KS + DA+ A G + +L+N+VM
Sbjct: 404 DVEKSLLPKIETNVYVGMTDMQIQWY---KSLLEKDIDAVNGAVGKRE--GKTRLLNIVM 458
Query: 1039 EFRKVCNHPDLFERADVMSPFS 1060
+ RK CNHP LFE A+ P++
Sbjct: 459 QLRKCCNHPYLFEGAEPGPPYT 480
Score = 140 bits (353), Expect = 2e-32
Identities = 67/134 (50%), Positives = 100/134 (74%), Gaps = 3/134 (2%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI--FIFLLST 1394
RVLI+ QM++++D++E+Y +R + + R+DGS+ ++R + + ++ KP+ F+FLL+T
Sbjct: 508 RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYN-KPNSEKFVFLLTT 566
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI +DSDWNP D QAMDRAHR+GQ +QV VYR + IEE++ +
Sbjct: 567 RAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIE 626
Query: 1455 RAKQKEHVQQVVME 1468
RA QK + Q+V++
Sbjct: 627 RAAQKLRLDQLVIQ 640
>YIL126w [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1359
Score = 258 bits (658), Expect = 7e-68
Identities = 159/430 (36%), Positives = 249/430 (56%), Gaps = 42/430 (9%)
Query: 658 MSNNKNKVVDLT---KTAASKTNVESIDFA----TEDDEKLRLMAAQNA-----SNALKE 705
M ++ K ++ T + AA K+N E T+D +L+ N+ S A++
Sbjct: 362 MEKDEQKRIERTAKQRLAALKSNDEEAYLKLLDQTKDTRITQLLRQTNSFLDSLSEAVRA 421
Query: 706 TQDKARKFDEE------DEEDGELNFQNPTSLGEITID-QPKMLAC-TLKEYQLKGLNWL 757
Q++A+ E DEE + ++ + ID QP +L TLKEYQL+GL W+
Sbjct: 422 QQNEAKILHGEEVQPITDEEREKTDYYEVAHRIKEKIDKQPSILVGGTLKEYQLRGLEWM 481
Query: 758 ANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRF 817
+LY+ +NGILADEMGLGKT+QSIS++ +L + GPF+V+ P ST+ NW E ++
Sbjct: 482 VSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKW 541
Query: 818 VPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQY 877
P + Y G N R +L + +R G F V++T+Y+ ++ D S L K W +
Sbjct: 542 APSLNTIIYKGTPNQRHSL-----QHQIRVGN---FDVLLTTYEYIIKDKSLLSKHDWAH 593
Query: 878 MILDEAQAIKSSQSSRWKTLLSFH-CRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHD 936
MI+DE +K++QS T+ ++ RNRL+LTGTP+QNN+ ELWALL+F++P +F+S
Sbjct: 594 MIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAK 653
Query: 937 EFSDWFSKDI-ESHAESNTELNQEQ----LRRLHMVLKPFMLRRIKKNVQSELGDKIEID 991
F DWF+ + + EL +E+ +RRLH VL+PF+LRR+KK V+ +L DK+E
Sbjct: 654 TFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKV 713
Query: 992 VLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSD--QKLVNLVMEFRKVCNHPDL 1049
+ C L+ Q +LYQ + ++A+ AG + T + L N +M+ RK+CNHP +
Sbjct: 714 IKCKLSGLQQQLYQQMLK-----HNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFV 768
Query: 1050 FERAD-VMSP 1058
F+ + V++P
Sbjct: 769 FDEVEGVVNP 778
Score = 140 bits (353), Expect = 2e-32
Identities = 69/148 (46%), Positives = 102/148 (68%), Gaps = 1/148 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKP-DIFIFLLST 1394
HRVL++FQMT++MD+ME++L + ++RLDGS+K ++R ++++ + D F FLLST
Sbjct: 808 HRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLST 867
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLG+NL ADTVI +D+DWNP D QA DRAHR+GQ +V + RL+ ++EE + +
Sbjct: 868 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILE 927
Query: 1455 RAKQKEHVQQVVMEGKAKENKQKIIEVE 1482
RA QK + V++ +NK E E
Sbjct: 928 RAMQKLDIDGKVIQAGKFDNKSTAEEQE 955
>At3g06400 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1057
Score = 258 bits (658), Expect = 7e-68
Identities = 160/455 (35%), Positives = 252/455 (55%), Gaps = 41/455 (9%)
Query: 640 KIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNA 699
K+K +++ + + + ++ NK K +T + + FA D + A
Sbjct: 89 KLKKQKIQEMLESQNASIDADMNNKGKGRLKYLLQQTELFA-HFAKSDGSSSQKKAKGRG 147
Query: 700 SNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLAN 759
+A K T+++ + ++EEDG N L QP + +++YQL GLNWL
Sbjct: 148 RHASKITEEEEDEEYLKEEEDGLTGSGNTRLL-----TQPSCIQGKMRDYQLAGLNWLIR 202
Query: 760 LYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVP 819
LY+ GINGILADEMGLGKT+Q+IS+LA+L + I GP +VV P STL NW+NEI RF P
Sbjct: 203 LYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVAPKSTLGNWMNEIRRFCP 262
Query: 820 QFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMI 879
+ + + GN +R+ +R+ L G+ F + VTS++M + + + L++ W+Y+I
Sbjct: 263 VLRAVKFLGNPEERRHIRE----DLLVAGK---FDICVTSFEMAIKEKTALRRFSWRYII 315
Query: 880 LDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFS 939
+DEA IK+ S KT+ F RLL+TGTP+QNN+ ELWALL+F++P +F S + F
Sbjct: 316 IDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFD 375
Query: 940 DWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFR 999
+WF E+ QE +++LH VL+PF+LRR+K +V+ L K E + ++
Sbjct: 376 EWFQISGEND-------QQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQM 428
Query: 1000 QAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERADVMSPF 1059
Q + Y+ L + +A+ NA G ++L+N+ M+ RK CNHP LF+ A+ P+
Sbjct: 429 QKQYYKAL---LQKDLEAV-NAGG-----ERKRLLNIAMQLRKCCNHPYLFQGAEPGPPY 479
Query: 1060 SFVSFGESASLSREGDFVEVNYSAKNLINYNLPRL 1094
+ GD + N L++ LP+L
Sbjct: 480 T------------TGDHLITNAGKMVLLDKLLPKL 502
Score = 140 bits (354), Expect = 1e-32
Identities = 72/150 (48%), Positives = 102/150 (68%), Gaps = 4/150 (2%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKP--DIFIFLLST 1394
RVLI+ QMT+++D++E+YL YR Y + R+DG++ D RD + KP + F+FLLST
Sbjct: 508 RVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTG-GDERDASIEAYNKPGSEKFVFLLST 566
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL AD VI YDSDWNP +D QA DRAHR+GQ ++V V+R IEE++ +
Sbjct: 567 RAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTESAIEEKVIE 626
Query: 1455 RAKQKEHVQQ-VVMEGKAKENKQKIIEVEK 1483
RA +K + V+ +G+ E K K + ++
Sbjct: 627 RAYKKLALDALVIQQGRLAEQKSKSVNKDE 656
>Hs21071058 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1052
Score = 256 bits (653), Expect = 2e-67
Identities = 157/443 (35%), Positives = 246/443 (55%), Gaps = 60/443 (13%)
Query: 620 AKKLNFLLTQTELYSHFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVE 679
A + +LL QTEL++HFI + KT S ++
Sbjct: 89 ANRFEYLLKQTELFAHFIQPAAQ---------------------------KTPTSPLKMK 121
Query: 680 SIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQP 739
+ DEK L++ + + R+ ++E++E+ T++ D P
Sbjct: 122 PGRPRIKKDEKQNLLSVGDYRH---------RRTEQEEDEELLTESSKATNVCTRFEDSP 172
Query: 740 KMLAC-TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPF 798
+ L++YQ++GLNWL +LY+ GINGILADEMGLGKT+Q+IS+L ++ NI GP
Sbjct: 173 SYVKWGKLRDYQVRGLNWLISLYENGINGILADEMGLGKTLQTISLLGYMKHYRNIPGPH 232
Query: 799 IVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVT 858
+V+ P STLHNW++E R+VP + + G+ K R + R L G + V VT
Sbjct: 233 MVLVPKSTLHNWMSEFKRWVPTLRSVCLIGD----KEQRAAFVRDVLLPGE---WDVCVT 285
Query: 859 SYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQ 918
SY+M++ + S +K W+Y+++DEA IK+ +S + + F NRLLLTGTP+QNN+
Sbjct: 286 SYEMLIKEKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIVREFKTTNRLLLTGTPLQNNLH 345
Query: 919 ELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKK 978
ELW+LL+F++P +F+S D+F WF +N +Q+ + RLHMVL+PF+LRRIK
Sbjct: 346 ELWSLLNFLLPDVFNSADDFDSWFD-------TNNCLGDQKLVERLHMVLRPFLLRRIKA 398
Query: 979 NVQSELGDKIEIDVLCDLTFRQAKLY-QVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLV 1037
+V+ L K E+ + L+ Q + Y ++L + I N+AG D +L+N++
Sbjct: 399 DVEKSLPPKKEVKIYVGLSKMQREWYTRILMKDID-----ILNSAGKMD---KMRLLNIL 450
Query: 1038 MEFRKVCNHPDLFERADVMSPFS 1060
M+ RK CNHP LF+ A+ P++
Sbjct: 451 MQLRKCCNHPYLFDGAEPGPPYT 473
Score = 145 bits (365), Expect = 6e-34
Identities = 67/133 (50%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDW-QTKPDIFIFLLSTR 1395
RVLI+ QMT+++D++E+Y +R Y + RLDG + D+R+D ++ + + F+F+LSTR
Sbjct: 501 RVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQTPHDERQDSINAYNEPNSTKFVFMLSTR 560
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGGLGINL AD VI YDSDWNP +D QAMDRAHR+GQT+ V V+R + T+EER+ +R
Sbjct: 561 AGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDNTVEERIVER 620
Query: 1456 AKQKEHVQQVVME 1468
A+ K + +V++
Sbjct: 621 AEMKLRLDSIVIQ 633
>YOR290c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1703
Score = 253 bits (645), Expect = 2e-66
Identities = 145/413 (35%), Positives = 241/413 (58%), Gaps = 34/413 (8%)
Query: 664 KVVDLTKTAA-----SKTN--VESIDFATEDDEKL-RLMAAQNASNALKETQD------- 708
K++D TK +TN ++S+ A +D +K + M + A +E D
Sbjct: 669 KLLDQTKDTRITHLLRQTNAFLDSLTRAVKDQQKYTKEMIDSHIKEASEEVDDLSMVPKM 728
Query: 709 KARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLAC-TLKEYQLKGLNWLANLYDQGING 767
K ++D++D+ + + E QP +L TLK+YQ+KGL W+ +L++ +NG
Sbjct: 729 KDEEYDDDDDNSNVDYYNVAHRIKEDIKKQPSILVGGTLKDYQIKGLQWMVSLFNNHLNG 788
Query: 768 ILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYW 827
ILADEMGLGKT+Q+IS+L +L + NI GP++V+ P STL NW +E +++ P + + +
Sbjct: 789 ILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFK 848
Query: 828 GNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIK 887
G+ N+RK + +R G F V++T+++ ++ + + L K+KW +MI+DE +K
Sbjct: 849 GSPNERKA-----KQAKIRAGE---FDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMK 900
Query: 888 SSQSSRWKTL-LSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDI 946
++QS TL +H RL+LTGTP+QNN+ ELWALL+F++P +F+S F +WF+
Sbjct: 901 NAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPF 960
Query: 947 -ESHAESNTELNQEQ----LRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQA 1001
+ + EL++E+ +RRLH VL+PF+LRR+KK+V+ EL DK+E V C + +
Sbjct: 961 ANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKC----KMS 1016
Query: 1002 KLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERAD 1054
L Q++ Q+ N + + N +M+ +K+CNHP +FE +
Sbjct: 1017 ALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVE 1069
Score = 136 bits (342), Expect = 3e-31
Identities = 68/148 (45%), Positives = 100/148 (66%), Gaps = 1/148 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFI-FLLST 1394
HRVLI+FQMT++MD+ME++L Y ++RLDG +K D+R +L+ + ++ F+LST
Sbjct: 1104 HRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILST 1163
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLG+NL ADTVI +D+DWNP D QA DRAHR+GQ +V + RL+ ++EE + +
Sbjct: 1164 RAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILE 1223
Query: 1455 RAKQKEHVQQVVMEGKAKENKQKIIEVE 1482
RA +K + V++ +NK E E
Sbjct: 1224 RAYKKLDIDGKVIQAGKFDNKSTSEEQE 1251
>YBR245c [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1129
Score = 252 bits (643), Expect = 4e-66
Identities = 153/440 (34%), Positives = 240/440 (53%), Gaps = 54/440 (12%)
Query: 621 KKLNFLLTQTELYSHFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVES 680
K+ LL+ + L+ HFI SK + + D + +N K K
Sbjct: 107 KRFEHLLSLSGLFKHFIESKAAKDPKFRQVLDVLEENKANGKGK---------------- 150
Query: 681 IDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPK 740
D + R + + LKE D +D+E E F+ + P
Sbjct: 151 ---GKHQDVRRRKTEHEEDAELLKEE-------DSDDDESIEFQFR----------ESPA 190
Query: 741 MLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIV 800
+ L+ YQ++G+NWL +L+ I GILADEMGLGKT+Q+IS L +L I GPF+V
Sbjct: 191 YVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLV 250
Query: 801 VTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSY 860
+ P STL+NW+ EI+R+ P G+ +R L + +K L F V++ SY
Sbjct: 251 IAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQ---KKLL----GCDFDVVIASY 303
Query: 861 QMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQEL 920
++++ + S L+K+ W+Y+I+DEA IK+ +S + L F RNRLL+TGTP+QNN+ EL
Sbjct: 304 EIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHEL 363
Query: 921 WALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNV 980
WALL+F++P +F +F DWFS +ES E + +++LH VL+PF+LRRIK +V
Sbjct: 364 WALLNFLLPDIFSDAQDFDDWFS------SESTEEDQDKIVKQLHTVLQPFLLRRIKSDV 417
Query: 981 QSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEF 1040
++ L K E+++ ++ Q K Y K + DA+ + G+ + S +L+N++M+
Sbjct: 418 ETSLLPKKELNLYVGMSSMQKKWY---KKILEKDLDAVNGSNGSKE--SKTRLLNIMMQL 472
Query: 1041 RKVCNHPDLFERADVMSPFS 1060
RK CNHP LF+ A+ P++
Sbjct: 473 RKCCNHPYLFDGAEPGPPYT 492
Score = 148 bits (373), Expect = 7e-35
Identities = 74/146 (50%), Positives = 106/146 (71%), Gaps = 8/146 (5%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI--FIFLLST 1394
RVLI+ QM++++D++E+Y +R Y + R+DGS+ +DR + D+ PD F+FLL+T
Sbjct: 520 RVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNA-PDSKKFVFLLTT 578
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINLT+AD V+ YDSDWNP D QAMDRAHR+GQ +QV V+RL+ ++EE++ +
Sbjct: 579 RAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILE 638
Query: 1455 RAKQKEHVQQVVMEG-----KAKENK 1475
RA QK + Q+V++ K KENK
Sbjct: 639 RATQKLRLDQLVIQQNRTSLKKKENK 664
>At5g18620 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1063
Score = 251 bits (641), Expect = 6e-66
Identities = 151/416 (36%), Positives = 234/416 (55%), Gaps = 48/416 (11%)
Query: 683 FATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKML 742
FA D + ++ K T+++ + ++EE G + S G + QP +
Sbjct: 123 FAKSDPSPSQKKGKGRGRHSSKLTEEEEDEECLKEEEGGIVG-----SGGTRLLTQPACI 177
Query: 743 ACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVT 802
L++YQL GLNWL LY+ GINGILADEMGLGKT+Q+IS+LA+L + I GP +VV
Sbjct: 178 QGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLAYLHEYRGINGPHMVVA 237
Query: 803 PASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQM 862
P STL NW+NEI RF P + + + GN +R+ +R+ + L G+ F + VTS++M
Sbjct: 238 PKSTLGNWMNEIRRFCPVLRAVKFLGNPEERRHIRE----ELLVAGK---FDICVTSFEM 290
Query: 863 VVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWA 922
+ + + L++ W+Y+I+DEA IK+ S KT+ F RLL+TGTP+QNN+ ELWA
Sbjct: 291 AIKEKTTLRRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWA 350
Query: 923 LLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQS 982
LL+F++P +F S + F +WF E+ QE +++LH VL+PF+LRR+K +V+
Sbjct: 351 LLNFLLPEVFSSAETFDEWFQISGEND-------QQEVVQQLHKVLRPFLLRRLKSDVEK 403
Query: 983 ELGDKIEIDVLCDLTFRQAKLYQVLKSQ----VSGGYDAIENAAGNDDVTSDQKLVNLVM 1038
L K E + ++ Q + Y+ L + V+GG + ++L+N+ M
Sbjct: 404 GLPPKKETILKVGMSQMQKQYYKALLQKDLEVVNGGGER-------------KRLLNIAM 450
Query: 1039 EFRKVCNHPDLFERADVMSPFSFVSFGESASLSREGDFVEVNYSAKNLINYNLPRL 1094
+ RK CNHP LF+ A+ P++ GD + N L++ LP+L
Sbjct: 451 QLRKCCNHPYLFQGAEPGPPYT------------TGDHLVTNAGKMVLLDKLLPKL 494
Score = 136 bits (342), Expect = 3e-31
Identities = 72/158 (45%), Positives = 106/158 (66%), Gaps = 8/158 (5%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKP--DIFIFLLST 1394
RVLI+ QMT+++D++E+YL YR Y + R+DG++ D RD + KP + F+FLLST
Sbjct: 500 RVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTG-GDERDASIEAYNKPGSEKFVFLLST 558
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL AD VI YDSDWNP +D QA DRAHR+GQ ++V V+R IE ++ +
Sbjct: 559 RAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTENAIEAKVIE 618
Query: 1455 RAKQKEHVQQ-VVMEGKAKE----NKQKIIEVEKEHSE 1487
RA +K + V+ +G+ E NK +++++ + +E
Sbjct: 619 RAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYGAE 656
>At5g66750 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 764
Score = 250 bits (638), Expect = 1e-65
Identities = 154/443 (34%), Positives = 230/443 (51%), Gaps = 53/443 (11%)
Query: 622 KLNFLLTQTELYSHFIGSK-----IKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKT 676
KL+ LLTQT+LYS F+ K I E E + T + T A +
Sbjct: 102 KLDELLTQTQLYSEFLLEKMEDITINGIESESQKAEPEKTGRGRKRKAASQYNNTKAKRA 161
Query: 677 NVESIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITI 736
I + ED E + + EE+ + QN
Sbjct: 162 VAAMISRSKEDGETIN---------------------SDLTEEETVIKLQNELC------ 194
Query: 737 DQPKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWG 796
P + LK YQLKG+ WL +L+ G+NGILAD+MGLGKT+Q+I L+HL + G
Sbjct: 195 --PLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGN-GLDG 251
Query: 797 PFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVM 856
P++V+ P STL NW NEI+RF P + Y G+ N R LR RKH+ F ++
Sbjct: 252 PYLVIAPLSTLSNWFNEIARFTPSINAIIYHGDKNQRDELR----RKHMPKTVGPKFPIV 307
Query: 857 VTSYQMVVSDAS-YLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQN 915
+TSY++ ++DA L+ W+Y+++DE +K+ + + L N+LLLTGTP+QN
Sbjct: 308 ITSYEVAMNDAKRILRHYPWKYVVIDEGHRLKNHKCKLLRELKHLKMDNKLLLTGTPLQN 367
Query: 916 NMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ----LRRLHMVLKPF 971
N+ ELW+LL+FI+P +F SHDEF WF ++ E+ E +++ + +LH +L+PF
Sbjct: 368 NLSELWSLLNFILPDIFTSHDEFESWFDFSEKNKNEATKEEEEKRRAQVVSKLHGILRPF 427
Query: 972 MLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSD- 1030
+LRR+K +V+ L K EI + +T Q K + L + + +E G + +
Sbjct: 428 ILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVN------NTLEAHLGENAIRGQG 481
Query: 1031 --QKLVNLVMEFRKVCNHPDLFE 1051
KL NLV++ RK CNHPDL +
Sbjct: 482 WKGKLNNLVIQLRKNCNHPDLLQ 504
Score = 141 bits (356), Expect = 7e-33
Identities = 75/144 (52%), Positives = 100/144 (69%), Gaps = 2/144 (1%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT-KPDIFIFLLST 1394
H+VLI+ Q TK++D+M+ Y + + + R+DGS KLD+RR + D+ K IFLLST
Sbjct: 541 HKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDGSVKLDERRRQIKDFSDEKSSCSIFLLST 600
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINLTAADT I YDSDWNP +D QAMDR HR+GQT+ V VYRL +IE R+
Sbjct: 601 RAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLSTAQSIETRVLK 660
Query: 1455 RAKQKEHVQQVVM-EGKAKENKQK 1477
RA K ++ VV+ +G+ + + K
Sbjct: 661 RAYSKLKLEHVVIGQGQFHQERAK 684
>At3g06010 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1132
Score = 245 bits (626), Expect = 3e-64
Identities = 142/421 (33%), Positives = 230/421 (53%), Gaps = 35/421 (8%)
Query: 652 DDSLTSMSNNKNKVVDLTKTAASKTN----VESIDFATEDDEKLRLMAAQNASNALKETQ 707
++ LT++ NK++ A + E ID + + L + A +
Sbjct: 326 NERLTTLLEETNKLLANLGAAVQRQKDAKLPEGIDLLKDSESDLSELDAPRSEPLQDLLP 385
Query: 708 DKARKFDEEDEED-------GELNFQNPT-SLGEITIDQPKML-ACTLKEYQLKGLNWLA 758
D+ E D D G+ + + S+ E +QP +L L+ YQL+GL W+
Sbjct: 386 DQDIDITESDNNDDSNDLLEGQRQYNSAIHSIQEKVTEQPSLLEGGELRSYQLEGLQWMV 445
Query: 759 NLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFV 818
+L++ +NGILADEMGLGKT+Q+IS++A+L + + GP+++V P + L NWVNE + +V
Sbjct: 446 SLFNNNLNGILADEMGLGKTIQTISLIAYLLENKGVPGPYLIVAPKAVLPNWVNEFATWV 505
Query: 819 PQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYM 878
P Y G +RK +R+ + + F+V++T Y +++ D ++L+K++W YM
Sbjct: 506 PSIAAFLYDGRLEERKAIRE-------KIAGEGKFNVLITHYDLIMRDKAFLKKIEWYYM 558
Query: 879 ILDEAQAIKSSQSSRWKTLLS-FHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDE 937
I+DE +K+ +S+ KTLL+ + + RLLLTGTPIQN++QELW+LL+F++P +F+S
Sbjct: 559 IVDEGHRLKNHESALAKTLLTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSVQN 618
Query: 938 FSDWFSKDIESHAESNTELNQEQ----LRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVL 993
F +WF+ N L E+ + RLH V++PF+LRR K V+ L K ++ +
Sbjct: 619 FEEWFNAPFAD--RGNVSLTDEEELLIIHRLHHVIRPFILRRKKDEVEKFLPGKTQVILK 676
Query: 994 CDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERA 1053
CD++ Q Y K G ++ +G + L NL M+ RK CNHP LF
Sbjct: 677 CDMSAWQKVYY---KQVTDMGRVGLQTGSG-----KSKSLQNLTMQLRKCCNHPYLFVGG 728
Query: 1054 D 1054
D
Sbjct: 729 D 729
Score = 140 bits (353), Expect = 2e-32
Identities = 72/162 (44%), Positives = 112/162 (68%), Gaps = 10/162 (6%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPD--IFIFLLS 1393
HR+L++ QMT+++D++E YLT Y ++RLDG++K D R L+ + +PD F+FLLS
Sbjct: 760 HRILLFSQMTRLIDVLEIYLTLNDYKYLRLDGTTKTDQRGLLLKQFN-EPDSPYFMFLLS 818
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLG+NL ADTVI +DSDWNP +D QA DRAHR+GQ ++V V+ L+ G++EE +
Sbjct: 819 TRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSVGSVEEVIL 878
Query: 1454 DRAKQKEHVQQVVME-------GKAKENKQKIIEVEKEHSES 1488
+RAKQK + V++ A++ ++ + E+ ++ + S
Sbjct: 879 ERAKQKMGIDAKVIQAGLFNTTSTAQDRREMLEEIMRKGTSS 920
>CE27114 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1336
Score = 244 bits (623), Expect = 7e-64
Identities = 139/366 (37%), Positives = 215/366 (57%), Gaps = 32/366 (8%)
Query: 703 LKETQDKARKFDEEDEEDGELNFQN--PTSLG--EITIDQPKML-----ACTLKEYQLKG 753
+K DKAR D+E E ++N ++ T+ G E +Q M+ + LK YQ+KG
Sbjct: 314 VKSILDKARNDDDEYENKTKMNIEDYYTTAHGVREEIKEQHFMMGGGNPSLKLKPYQIKG 373
Query: 754 LNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNE 813
L W+ +L++ +NGILADEMGLGKT+Q+I+ + +L + GPF+V+ P ST+ NW NE
Sbjct: 374 LEWMVSLFNNNLNGILADEMGLGKTIQTIAFITYLMEIKKTSGPFLVIVPLSTVPNWQNE 433
Query: 814 ISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKM 873
++ ++ Y G RK ++ G+ F+V++T+++ V+ + + L K+
Sbjct: 434 FDKWAANVHLIAYKGPKETRKVFEPI-----IKSGK---FNVLLTTFEYVIREKALLGKL 485
Query: 874 KWQYMILDEAQAIKSSQSSRWKTL-LSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLF 932
+W+YMI+DE +K+ + L F C+ RLL+TGTP+QN + ELWALL+F++PS+F
Sbjct: 486 RWKYMIIDEGHRLKNQHCKLTEMLNTRFQCQRRLLITGTPLQNKLPELWALLNFLLPSIF 545
Query: 933 DSHDEFSDWFSKDIESHAESNTELNQEQ----LRRLHMVLKPFMLRRIKKNVQSELGDKI 988
S F WF+ + E EL QE+ +RRLH VL+PF+LRR+KK V+SEL DK+
Sbjct: 546 SSCSTFEQWFNAPFATTGE-KVELTQEETMLIIRRLHKVLRPFLLRRLKKEVESELPDKM 604
Query: 989 EIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPD 1048
E V CD++ Q LY+ ++ + D N T + L N ++ RK+CNHP
Sbjct: 605 EFVVRCDMSALQKVLYKHMQKGLL--LDGKTN-------TGSKSLRNTMIHLRKLCNHPF 655
Query: 1049 LFERAD 1054
LFE +
Sbjct: 656 LFENVE 661
Score = 136 bits (342), Expect = 3e-31
Identities = 71/163 (43%), Positives = 105/163 (63%), Gaps = 11/163 (6%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT-KPDIFIFLLST 1394
HRVL++FQMT MM ++E++L ++RLDGS+K D+R L+ + + F+F+LST
Sbjct: 700 HRVLMFFQMTSMMTIVEDFLAGGTIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLST 759
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ +V V+RL+ ++EE++
Sbjct: 760 RAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKAEVRVFRLITANSVEEKILA 819
Query: 1455 RAKQKEHVQQVVMEGKAKENK----------QKIIEVEKEHSE 1487
A+ K +V + V++ +N+ + II+ E E E
Sbjct: 820 AARYKLNVDEKVIQAGKFDNRSTGAERREILENIIKTENESEE 862
>7303422 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1027
Score = 244 bits (623), Expect = 7e-64
Identities = 157/436 (36%), Positives = 235/436 (53%), Gaps = 44/436 (10%)
Query: 643 TNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNASNA 702
T E T D+ TS S K D K A ++ DF + E +A +
Sbjct: 12 TEENSNETTSDAATSSSGEKEAEFD-NKIEADRSR--RFDFLLKQTEIFTHFMTNSAKSP 68
Query: 703 LK------ETQDKARKFD--------EEDEEDGELNFQNPTSLGEITIDQPK--MLACTL 746
K + +DK ++ D E EED EL ++ + D + + +
Sbjct: 69 TKPKGRPKKIKDKDKEKDVADHRHRKTEQEEDEELLAEDSATKEIFRFDASPAYIKSGEM 128
Query: 747 KEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAST 806
++YQ++GLNW+ +LY+ GINGILADEMGLGKT+Q+IS+L +L N GP IV+ P ST
Sbjct: 129 RDYQIRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYLKHFKNQAGPHIVIVPKST 188
Query: 807 LHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSD 866
L NWVNE ++ P + + G+ + R T + R L G + V VTSY+M + +
Sbjct: 189 LQNWVNEFKKWCPSLRAVCLIGDQDTRNT----FIRDVLMPGE---WDVCVTSYEMCIRE 241
Query: 867 ASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHF 926
S +K W+Y+++DEA IK+ +S + L F NRLL+TGTP+QNN+ ELWALL+F
Sbjct: 242 KSVFKKFNWRYLVIDEAHRIKNEKSKLSEILREFKTANRLLITGTPLQNNLHELWALLNF 301
Query: 927 IMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQL-RRLHMVLKPFMLRRIKKNVQSELG 985
++P +F+S ++F +WF+ +NT L + L RLH VLKPF+LRR+K V+ L
Sbjct: 302 LLPDVFNSSEDFDEWFN--------TNTCLGDDALITRLHAVLKPFLLRRLKAEVEKRLK 353
Query: 986 DKIEIDVLCDLTFRQAKLY-QVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVC 1044
K E+ + L+ Q Y +VL + + N AG +L N++M+ RK
Sbjct: 354 PKKEMKIFVGLSKMQRDWYTKVLLKDID-----VVNGAGK---VEKMRLQNILMQLRKCT 405
Query: 1045 NHPDLFERADVMSPFS 1060
NHP LF+ A+ P++
Sbjct: 406 NHPYLFDGAEPGPPYT 421
Score = 144 bits (364), Expect = 8e-34
Identities = 68/134 (50%), Positives = 98/134 (72%), Gaps = 1/134 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI-FIFLLSTR 1395
RVLI+ QMT+M+D++E+Y +R Y + RLDG + +DR + ++ F+F+LSTR
Sbjct: 449 RVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQTPHEDRNRQIQEFNMDNSAKFLFMLSTR 508
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGGLGINL AD VI YDSDWNP +D QAMDRAHR+GQ +QV V+RL+ T+EE++ +R
Sbjct: 509 AGGLGINLATADVVIIYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRLITESTVEEKIVER 568
Query: 1456 AKQKEHVQQVVMEG 1469
A+ K + ++V++G
Sbjct: 569 AEVKLRLDKMVIQG 582
>CE05553 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1474
Score = 238 bits (607), Expect = 5e-62
Identities = 143/387 (36%), Positives = 221/387 (56%), Gaps = 50/387 (12%)
Query: 687 DDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQ------NPTSLGEITIDQPK 740
++EK A + K +KAR +EEDE D + Q + E + Q
Sbjct: 465 EEEKDDQYAGMDEETKAKMILEKAR--NEEDEYDQKTKKQMADYYATAHKIKEKVVKQHT 522
Query: 741 MLA-----CTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIW 795
+ LK YQ+KGL W+ +LY+ +NGILADEMGLGKT+Q+IS++ +L +
Sbjct: 523 TMGGGDPNLLLKPYQIKGLEWMVSLYNNNLNGILADEMGLGKTIQTISLVTYLMEVKQNN 582
Query: 796 GPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHV 855
GP++V+ P STL NW NE +++ P + Y G + R+ + +R G F+V
Sbjct: 583 GPYLVIVPLSTLSNWQNEFAKWAPSVTTIIYKGTKDARRRV-----EGQIRKG---AFNV 634
Query: 856 MVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLS--FHCRNRLLLTGTPI 913
++T+Y+ V+ + + L K++W+YMI+DE +K + + + +L+ FH ++RLLLTGTP+
Sbjct: 635 LMTTYEYVIKEKALLGKIRWKYMIIDEGHRLK-NHNCKLTLMLNGFFHAQHRLLLTGTPL 693
Query: 914 QNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ----LRRLHMVLK 969
QN + ELWALL+F++PS+F S F WF+ + E ELNQE+ +RRLH VL+
Sbjct: 694 QNKLPELWALLNFLLPSIFSSCGTFEQWFNAPFATTGE-KVELNQEETMLIIRRLHKVLR 752
Query: 970 PFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQ------VLKSQVSGGYDAIENAAG 1023
PF+LRR+KK V+S+L DK E + CD + Q +Y+ +L +++S G
Sbjct: 753 PFLLRRLKKEVESQLPDKTEYVIKCDQSALQKVIYRHMQKGLLLDAKMSSG--------- 803
Query: 1024 NDDVTSDQKLVNLVMEFRKVCNHPDLF 1050
+ L+N V+ RK+CNHP LF
Sbjct: 804 ------ARSLMNTVVHLRKLCNHPFLF 824
Score = 152 bits (383), Expect = 5e-36
Identities = 76/163 (46%), Positives = 114/163 (69%), Gaps = 11/163 (6%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT-KPDIFIFLLST 1394
HR+L++FQMT MM++ E++L +R+YT++RLDGS+K D+R DL+ + D+F+F+LST
Sbjct: 867 HRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLLTQFNAPNSDLFLFMLST 926
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLG+NL ADTVI +DSDWNP D QA DRAHR+GQ ++V V RL+ ++EE++
Sbjct: 927 RAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEVRVLRLITANSVEEKILA 986
Query: 1455 RAKQKEHV-QQVVMEGK---------AKENKQKIIEVEKEHSE 1487
A+ K +V ++V+ GK K+ ++II+ + E E
Sbjct: 987 AARYKLNVDEKVIQAGKFDQRSTGAERKQMLEQIIQADGEEEE 1029
>Hs21071056 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1647
Score = 237 bits (605), Expect = 9e-62
Identities = 122/322 (37%), Positives = 200/322 (61%), Gaps = 22/322 (6%)
Query: 741 MLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIV 800
M+ LK+YQ+KGL WL +LY+ +NGILADEMGLGKT+Q+I+++ +L + I GPF++
Sbjct: 749 MVNGVLKQYQIKGLEWLVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRINGPFLI 808
Query: 801 VTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSY 860
+ P STL NW E ++ P + Y G+ R+ LR G+ F+V++T+Y
Sbjct: 809 IVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAARRAF-----VPQLRSGK---FNVLLTTY 860
Query: 861 QMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFH-CRNRLLLTGTPIQNNMQE 919
+ ++ D L K++W+YMI+DE +K+ + L + + RLLLTGTP+QN + E
Sbjct: 861 EYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPE 920
Query: 920 LWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ----LRRLHMVLKPFMLRR 975
LWALL+F++P++F S F WF+ E +LN+E+ +RRLH VL+PF+LRR
Sbjct: 921 LWALLNFLLPTIFKSCSTFEQWFNAPFAMTGE-KVDLNEEETILIIRRLHKVLRPFLLRR 979
Query: 976 IKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQ---VSGGYDAIENAAGNDDVTSDQK 1032
+KK V+++L +K+E + CD++ Q LY+ ++++ ++ G + + G +
Sbjct: 980 LKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTDGSEKDKKGKG-----GTKT 1034
Query: 1033 LVNLVMEFRKVCNHPDLFERAD 1054
L+N +M+ RK+CNHP +F+ +
Sbjct: 1035 LMNTIMQLRKICNHPYMFQHIE 1056
Score = 138 bits (347), Expect = 8e-32
Identities = 71/159 (44%), Positives = 104/159 (64%), Gaps = 7/159 (4%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDW-QTKPDIFIFLLST 1394
H+VL++ QMT +M +ME+Y YR + ++RLDG++K +DR L+ + + + FIFLLST
Sbjct: 1097 HKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLST 1156
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLG+NL +ADTVI +DSDWNP D QA DRAHR+GQ +V V RL ++EE++
Sbjct: 1157 RAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA 1216
Query: 1455 RAKQKEHVQQVVMEG------KAKENKQKIIEVEKEHSE 1487
AK K +V Q V++ + ++ ++ EH E
Sbjct: 1217 AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEE 1255
>Hs21071050 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1568
Score = 236 bits (601), Expect = 3e-61
Identities = 120/318 (37%), Positives = 199/318 (61%), Gaps = 22/318 (6%)
Query: 745 TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPA 804
TLK YQL+GL W+ +LY+ +NGILADEMGLGKT+Q+I+++ +L + + GP++++ P
Sbjct: 719 TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL 778
Query: 805 STLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVV 864
STL NW E ++ P + Y G R++L LR G+ F+V++T+Y+ ++
Sbjct: 779 STLSNWTYEFDKWAPSVVKISYKGTPAMRRSL-----VPQLRSGK---FNVLLTTYEYII 830
Query: 865 SDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFH-CRNRLLLTGTPIQNNMQELWAL 923
D L K++W+YMI+DE +K+ + L + + R+LLTGTP+QN + ELWAL
Sbjct: 831 KDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWAL 890
Query: 924 LHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ----LRRLHMVLKPFMLRRIKKN 979
L+F++P++F S F WF+ E +LN+E+ +RRLH VL+PF+LRR+KK
Sbjct: 891 LNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDLNEEETILIIRRLHKVLRPFLLRRLKKE 949
Query: 980 VQSELGDKIEIDVLCDLTFRQAKLYQVLKSQ---VSGGYDAIENAAGNDDVTSDQKLVNL 1036
V+S+L +K+E + CD++ Q LY+ ++++ ++ G + + G + L+N
Sbjct: 950 VESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKG-----GAKTLMNT 1004
Query: 1037 VMEFRKVCNHPDLFERAD 1054
+M+ RK+CNHP +F+ +
Sbjct: 1005 IMQLRKICNHPYMFQHIE 1022
Score = 141 bits (355), Expect = 9e-33
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 11/163 (6%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDW-QTKPDIFIFLLST 1394
HRVL++ QMT +M +ME+Y +R + ++RLDG++K +DR L+ + + FIFLLST
Sbjct: 1063 HRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLST 1122
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLG+NL AADTV+ +DSDWNP D QA DRAHR+GQ +V V RL ++EE++
Sbjct: 1123 RAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA 1182
Query: 1455 RAKQKEHVQQVVMEGKAKENK----------QKIIEVEKEHSE 1487
AK K +V Q V++ + K Q I+E E+E+ E
Sbjct: 1183 AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEE 1225
>Hs21071048 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1586
Score = 236 bits (601), Expect = 3e-61
Identities = 120/318 (37%), Positives = 199/318 (61%), Gaps = 22/318 (6%)
Query: 745 TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPA 804
TLK YQL+GL W+ +LY+ +NGILADEMGLGKT+Q+I+++ +L + + GP++++ P
Sbjct: 719 TLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPL 778
Query: 805 STLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVV 864
STL NW E ++ P + Y G R++L LR G+ F+V++T+Y+ ++
Sbjct: 779 STLSNWTYEFDKWAPSVVKISYKGTPAMRRSL-----VPQLRSGK---FNVLLTTYEYII 830
Query: 865 SDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFH-CRNRLLLTGTPIQNNMQELWAL 923
D L K++W+YMI+DE +K+ + L + + R+LLTGTP+QN + ELWAL
Sbjct: 831 KDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWAL 890
Query: 924 LHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ----LRRLHMVLKPFMLRRIKKN 979
L+F++P++F S F WF+ E +LN+E+ +RRLH VL+PF+LRR+KK
Sbjct: 891 LNFLLPTIFKSCSTFEQWFNAPFAMTGE-RVDLNEEETILIIRRLHKVLRPFLLRRLKKE 949
Query: 980 VQSELGDKIEIDVLCDLTFRQAKLYQVLKSQ---VSGGYDAIENAAGNDDVTSDQKLVNL 1036
V+S+L +K+E + CD++ Q LY+ ++++ ++ G + + G + L+N
Sbjct: 950 VESQLPEKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKG-----GAKTLMNT 1004
Query: 1037 VMEFRKVCNHPDLFERAD 1054
+M+ RK+CNHP +F+ +
Sbjct: 1005 IMQLRKICNHPYMFQHIE 1022
Score = 141 bits (355), Expect = 9e-33
Identities = 75/163 (46%), Positives = 106/163 (65%), Gaps = 11/163 (6%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDW-QTKPDIFIFLLST 1394
HRVL++ QMT +M +ME+Y +R + ++RLDG++K +DR L+ + + FIFLLST
Sbjct: 1063 HRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLST 1122
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLG+NL AADTV+ +DSDWNP D QA DRAHR+GQ +V V RL ++EE++
Sbjct: 1123 RAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILA 1182
Query: 1455 RAKQKEHVQQVVMEGKAKENK----------QKIIEVEKEHSE 1487
AK K +V Q V++ + K Q I+E E+E+ E
Sbjct: 1183 AAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEENEE 1225
>At2g28290 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1339
Score = 234 bits (597), Expect = 8e-61
Identities = 154/439 (35%), Positives = 245/439 (55%), Gaps = 48/439 (10%)
Query: 626 LLTQTELYSHFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFAT 685
LL +TE Y +GSK+K +L LTS N+ D T+T+ + + I+
Sbjct: 687 LLKETEKYLQKLGSKLKEAKL--------LTSRFENE---ADETRTSNATDDETLIENED 735
Query: 686 EDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLAC- 744
E D+ + L + + E +E+ + S+ E +QP L
Sbjct: 736 ESDQAKASYISAFFHLFLMVMIHTIQHYLESNEK----YYLMAHSIKENINEQPSSLVGG 791
Query: 745 TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQS--------ISVLAHLADRYNIWG 796
L+EYQ+ GL WL +LY+ +NGILADEMGLGKTVQ IS++ +L + N G
Sbjct: 792 KLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQMGLGKTVQVISLICYLMETKNDRG 851
Query: 797 PFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVM 856
PF+VV P+S L W +EI+ + P + Y G ++R+ L K + + + + F+V+
Sbjct: 852 PFLVVVPSSVLPGWQSEINFWAPSIHKIVYCGTPDERRKLFK----EQIVHQK---FNVL 904
Query: 857 VTSYQMVVS--DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQ 914
+T+Y+ +++ D L K+ W Y+I+DE IK++ L + +RLLLTGTP+Q
Sbjct: 905 LTTYEYLMNKHDRPKLSKIHWHYIIIDEGHRIKNASCKLNADLKHYVSSHRLLLTGTPLQ 964
Query: 915 NNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ----LRRLHMVLKP 970
NN++ELWALL+F++P++F+S ++FS WF+K +S+ ES+ L++E+ + RLH VL+P
Sbjct: 965 NNLEELWALLNFLLPNIFNSSEDFSQWFNKPFQSNGESSALLSEEENLLIINRLHQVLRP 1024
Query: 971 FMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSD 1030
F+LRR+K V++EL +KIE + C+ + Q ++L +V +I NA
Sbjct: 1025 FVLRRLKHKVENELPEKIERLIRCEASAYQ----KLLMKRVEDNLGSIGNA-------KS 1073
Query: 1031 QKLVNLVMEFRKVCNHPDL 1049
+ + N VME R +CNHP L
Sbjct: 1074 RAVHNSVMELRNICNHPYL 1092
Score = 125 bits (315), Expect = 4e-28
Identities = 70/155 (45%), Positives = 98/155 (63%), Gaps = 4/155 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDW-QTKPDIFIFLLST 1394
HRVL + MT+++D+ME+YLT + Y ++RLDG + DR L+ + ++ FIFLLS
Sbjct: 1127 HRVLFFSTMTRLLDVMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSI 1186
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGG+G+NL AADTVI +D+DWNP +D QA RAHR+GQ + V V R ++EE++R
Sbjct: 1187 RAGGVGVNLQAADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVNSVEEQVRA 1246
Query: 1455 RAKQKEHV-QQVVMEGKAKENKQKIIEVEKEHSES 1488
A+ K V Q + G N E KE+ ES
Sbjct: 1247 SAEHKLGVANQSITAGFFDNNTS--AEDRKEYLES 1279
>At2g13370 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1738
Score = 232 bits (591), Expect = 4e-60
Identities = 127/319 (39%), Positives = 200/319 (61%), Gaps = 18/319 (5%)
Query: 737 DQPK-MLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIW 795
+QP+ ++ TL++YQL+GLN+L N + N ILADEMGLGKTVQS+S+L L + I
Sbjct: 631 EQPEWLIGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLGFLQNTQQIP 690
Query: 796 GPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHV 855
GPF+VV P STL NW E +++P I+ Y G R+ K D + GR F+
Sbjct: 691 GPFLVVVPLSTLANWAKEFRKWLPGMNIIVYVGTRASREVRNKTNDVH--KVGRPIKFNA 748
Query: 856 MVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQN 915
++T+Y++V+ D + L K+KW Y+++DEA +K+S++ + LL F +N+LL+TGTP+QN
Sbjct: 749 LLTTYEVVLKDKAVLSKIKWIYLMVDEAHRLKNSEAQLYTALLEFSTKNKLLITGTPLQN 808
Query: 916 NMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRR 975
+++ELWALLHF+ P F + DEF +E++ ++ + N+ +L LH+ L+P +LRR
Sbjct: 809 SVEELWALLHFLDPGKFKNKDEF-------VENY-KNLSSFNESELANLHLELRPHILRR 860
Query: 976 IKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVN 1035
+ K+V+ L KIE + +++ Q + Y+ + + +D + GN L+N
Sbjct: 861 VIKDVEKSLPPKIERILRVEMSPLQKQYYKWILER--NFHDLNKGVRGN-----QVSLLN 913
Query: 1036 LVMEFRKVCNHPDLFERAD 1054
+V+E +K CNHP LFE AD
Sbjct: 914 IVVELKKCCNHPFLFESAD 932
Score = 134 bits (338), Expect = 8e-31
Identities = 73/173 (42%), Positives = 105/173 (60%), Gaps = 6/173 (3%)
Query: 1311 MDRFITESAXXXXXXXXXXXXXXXXHRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSK 1370
+D+ I S HRVLI+ QM +M+D++ EYL+ R + RLDGS+K
Sbjct: 945 LDKIILSSGKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTK 1004
Query: 1371 LDDRRDLVHDWQTKP-DIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAH 1429
+ R+ + + D F FLLSTRAGGLGINL ADTV+ +DSDWNP D QAM RAH
Sbjct: 1005 AELRQQAMDHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAH 1064
Query: 1430 RLGQTRQVTVYRLLIRGTIEERMRDRAKQK---EH--VQQVVMEGKAKENKQK 1477
R+GQ V +YR + ++EE + +RAK+K +H +Q++ EG+ ++ + K
Sbjct: 1065 RIGQQEVVNIYRFVTSKSVEEEILERAKRKMVLDHLVIQKLNAEGRLEKRETK 1117
>Hs21071046 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 1033
Score = 231 bits (590), Expect = 5e-60
Identities = 149/442 (33%), Positives = 228/442 (50%), Gaps = 79/442 (17%)
Query: 620 AKKLNFLLTQTELYSHFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVE 679
AK+ FLL QTEL++HFI + K+ S N++
Sbjct: 92 AKRFEFLLKQTELFAHFIQPSAQ---------------------------KSPTSPLNMK 124
Query: 680 SIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQP 739
+ DEK L++A + + E EEDEE + + +
Sbjct: 125 LGRPRIKKDEKQSLISAGDYRHRRTE--------QEEDEELLSESRKTSNVCIRFEVSPS 176
Query: 740 KMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFI 799
+ L++YQ++GLNWL +LY+ G+NGILADE I GP +
Sbjct: 177 YVKGGPLRDYQIRGLNWLISLYENGVNGILADE---------------------IPGPHM 215
Query: 800 VVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTS 859
V+ P STLHNW+NE R+VP +++ + G+ K R + R + G + V VTS
Sbjct: 216 VLVPKSTLHNWMNEFKRWVPSLRVICFVGD----KDARAAFIRDEMMPGE---WDVCVTS 268
Query: 860 YQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQE 919
Y+MV+ + S +K W+Y+++DEA IK+ +S + + F NRLLLTGTP+QNN+ E
Sbjct: 269 YEMVIKEKSVFKKFHWRYLVIDEAHRIKNEKSKLSEIVREFKSTNRLLLTGTPLQNNLHE 328
Query: 920 LWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKN 979
LWALL+F++P +F+S D+F WF N +Q+ + RLH VLKPF+LRRIK +
Sbjct: 329 LWALLNFLLPDVFNSADDFDSWFD-------TKNCLGDQKLVERLHAVLKPFLLRRIKTD 381
Query: 980 VQSELGDKIEIDVLCDLTFRQAKLY-QVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVM 1038
V+ L K EI + L+ Q + Y ++L + + N++G D +L+N++M
Sbjct: 382 VEKSLPPKKEIKIYLGLSKMQREWYTKILMKDID-----VLNSSGKMD---KMRLLNILM 433
Query: 1039 EFRKVCNHPDLFERADVMSPFS 1060
+ RK CNHP LF+ A+ P++
Sbjct: 434 QLRKCCNHPYLFDGAEPGPPYT 455
Score = 134 bits (336), Expect = 1e-30
Identities = 67/145 (46%), Positives = 96/145 (66%), Gaps = 13/145 (8%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQ-------------T 1383
RVLI+ QMT+++D++E+Y +R Y + RLDG + ++R D + +
Sbjct: 483 RVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQTPHEEREDKFLEVEFLGQREAIEAFNAP 542
Query: 1384 KPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLL 1443
FIF+LSTRAGGLGINL +AD VI YDSDWNP +D QAMDRAHR+GQ + V V+RL+
Sbjct: 543 NSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVRVFRLI 602
Query: 1444 IRGTIEERMRDRAKQKEHVQQVVME 1468
T+EER+ +RA+ K + +V++
Sbjct: 603 TDNTVEERIVERAEIKLRLDSIVIQ 627
>CE00789 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 971
Score = 228 bits (580), Expect = 7e-59
Identities = 129/320 (40%), Positives = 190/320 (59%), Gaps = 31/320 (9%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
+++YQ++GLNWLA+L INGILADEMGLGKT+Q+IS++ ++ N P +V+ P S
Sbjct: 94 MRDYQVRGLNWLASLQHNKINGILADEMGLGKTLQTISMIGYMKHYKNKASPHLVIVPKS 153
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDA----PFHVMVTSYQ 861
TL NW NE ++ P + G+ R + RD F V T+Y+
Sbjct: 154 TLQNWANEFKKWCPSINAVVLIGDEAARNQVL-----------RDVILPQKFDVCCTTYE 202
Query: 862 MVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELW 921
M++ + L+K+ W+Y+I+DEA IK+ +S +T+ + NRLL+TGTP+QNN+ ELW
Sbjct: 203 MMLKVKTQLKKLNWRYIIIDEAHRIKNEKSKLSETVRELNSENRLLITGTPLQNNLHELW 262
Query: 922 ALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQ 981
ALL+F++P +F S D+F WFS D S NT+L ++RLH VL+PF+LRRIK +V+
Sbjct: 263 ALLNFLLPDIFTSSDDFDSWFSNDAMS---GNTDL----VQRLHKVLQPFLLRRIKSDVE 315
Query: 982 SELGDKIEIDVLCDLTFRQAKLY-QVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEF 1040
L K E+ V L+ Q + Y +VL + I N AG +L+N++M
Sbjct: 316 KSLLPKKEVKVYVGLSKMQREWYTKVLMKDID-----IINGAGK---VEKARLMNILMHL 367
Query: 1041 RKVCNHPDLFERADVMSPFS 1060
RK NHP LF+ A+ PF+
Sbjct: 368 RKCVNHPYLFDGAEPGPPFT 387
Score = 140 bits (352), Expect = 2e-32
Identities = 69/145 (47%), Positives = 100/145 (68%), Gaps = 3/145 (2%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI--FIFLLST 1394
RVLI+ Q ++M+DL+E++ +R Y + RLDGS+ +DR + + + PD FIF+L+T
Sbjct: 415 RVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGSTPHEDRSNAIEAYNA-PDSKKFIFMLTT 473
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL AD VI YDSDWNP D QAMDRAHR+GQ +QV V+RL+ T++ER+ +
Sbjct: 474 RAGGLGINLATADVVIIYDSDWNPQSDLQAMDRAHRIGQKKQVRVFRLITENTVDERIIE 533
Query: 1455 RAKQKEHVQQVVMEGKAKENKQKII 1479
+A+ K + +V++ QK +
Sbjct: 534 KAEAKLRLDNIVIQQGRMSEAQKTL 558
>YFR038w [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 778
Score = 226 bits (575), Expect = 3e-58
Identities = 142/399 (35%), Positives = 214/399 (53%), Gaps = 56/399 (14%)
Query: 621 KKLNFLLTQTELYSHFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVES 680
KKLN + Q+++YS I D+L SN N +
Sbjct: 131 KKLNEFVRQSQVYSSIIA--------------DTLLHRSNEV-------------ANANT 163
Query: 681 IDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPK 740
D + DDE +++S K + F ++ +++ + QN + I QP+
Sbjct: 164 KDNSNSDDE-------EHSSKKRKTKKKSITDFFKKQKKNEDTTTQNGAP-DDAAIKQPR 215
Query: 741 MLA-CTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFI 799
+L C LK YQL+GLNWL LY+ G+NGILADEMGLGKTVQSI++LA + + + GPF+
Sbjct: 216 LLKNCILKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYEM-DTKGPFL 274
Query: 800 VVTPASTLHNWVNEISRFVPQFKILPYWGNAN--DRKTLRKFWDRKHLRYGRDAPFHVMV 857
V P STL NW+NE ++F P +L Y+G +R K + ++H G +++
Sbjct: 275 VTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTG------IVI 328
Query: 858 TSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNM 917
TSY++++ D + W+++I+DE +K+ K L + NRLLLTGTP+QNN+
Sbjct: 329 TSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNL 388
Query: 918 QELWALLHFIMPSLFDSHDEFSDWFSKD-----IESHAES-----NTELNQEQLRRLHMV 967
ELW+LL+FIMP +F + F+ WF D S++E+ N EL + + LH +
Sbjct: 389 AELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTI 448
Query: 968 LKPFMLRRIKKNVQSE-LGDKIEIDVLCDLTFRQAKLYQ 1005
LKPF+LRR+KK V + L K E + C +T Q K Y+
Sbjct: 449 LKPFLLRRLKKVVLANILPPKREYIINCPMTSAQEKFYK 487
Score = 127 bits (320), Expect = 1e-28
Identities = 65/144 (45%), Positives = 91/144 (63%), Gaps = 1/144 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIF-IFLLST 1394
H+VLIY Q M+DL+E++ + R+DGS + R+D + + + D IFLLST
Sbjct: 620 HKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLST 679
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RA GLGINL ADTV+ +DSDWNP +D QAMDR HR+GQ V VYRL TIE +
Sbjct: 680 RAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILT 739
Query: 1455 RAKQKEHVQQVVMEGKAKENKQKI 1478
RA K +++++V++ N +K+
Sbjct: 740 RAANKRNLERMVIQMGKFNNLKKL 763
>At5g19310 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1041
Score = 226 bits (575), Expect = 3e-58
Identities = 131/355 (36%), Positives = 201/355 (55%), Gaps = 21/355 (5%)
Query: 705 ETQDKARKFDEEDEEDGELNFQNPT-SLGEITIDQPKML-ACTLKEYQLKGLNWLANLYD 762
E D D D +GE F S+ E QP +L L+ YQL+GL W+ +LY+
Sbjct: 320 EIIDSDNNDDSNDLLEGERQFNLAIHSIQEKVTKQPSLLQGGELRSYQLEGLQWMVSLYN 379
Query: 763 QGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFK 822
NGILADEMGLGKT+Q+I+++A+L + ++ GP +++ P + L NW NE + + P
Sbjct: 380 NDYNGILADEMGLGKTIQTIALIAYLLESKDLHGPHLILAPKAVLPNWENEFALWAPSIS 439
Query: 823 ILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDE 882
Y G+ R + R + G+ F+V++T Y +++ D ++L+K+ W YMI+DE
Sbjct: 440 AFLYDGSKEKRTEI-----RARIAGGK---FNVLITHYDLIMRDKAFLKKIDWNYMIVDE 491
Query: 883 AQAIKSSQSSRWKTL-LSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDW 941
+K+ + + KTL + + RLLLTGTPIQN++QELW+LL+F++P +F+S F +W
Sbjct: 492 GHRLKNHECALAKTLGTGYRIKRRLLLTGTPIQNSLQELWSLLNFLLPHIFNSIHNFEEW 551
Query: 942 FSKDIESHAESNTELNQEQL--RRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFR 999
F+ ++ +E L RLH V++PF+LRR K V+ L K ++ + CD++
Sbjct: 552 FNTPFAECGSASLTDEEELLIINRLHHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAW 611
Query: 1000 QAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERAD 1054
Q KLY K G + + G + L NL M+ RK CNHP LF AD
Sbjct: 612 Q-KLY--YKQVTDVGRVGLHSGNG-----KSKSLQNLTMQLRKCCNHPYLFVGAD 658
Score = 140 bits (354), Expect = 1e-32
Identities = 70/135 (51%), Positives = 100/135 (73%), Gaps = 3/135 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPD--IFIFLLS 1393
HR+L++ QMT+++DL+E YL+ Y ++RLDGS+K D R L+ + +PD F+FLLS
Sbjct: 689 HRILLFSQMTRLIDLLEIYLSLNDYMYLRLDGSTKTDQRGILLKQFN-EPDSPYFMFLLS 747
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLG+NL ADT+I +DSDWNP +D QA DRAHR+GQ ++V V+ L+ G+IEE +
Sbjct: 748 TRAGGLGLNLQTADTIIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSIGSIEEVIL 807
Query: 1454 DRAKQKEHVQQVVME 1468
+RAKQK + V++
Sbjct: 808 ERAKQKMGIDAKVIQ 822
>At2g46020 [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 1245
Score = 221 bits (562), Expect = 9e-57
Identities = 120/338 (35%), Positives = 199/338 (58%), Gaps = 34/338 (10%)
Query: 730 SLGEITIDQPKML-ACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHL 788
++ E+ + QP ML A TL++YQL GL W+ +LY+ +NGILADEMGLGKTVQ ++++A+L
Sbjct: 17 AVNEVVVRQPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALIAYL 76
Query: 789 ADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYG 848
+ +GP +++ P + L NW +E+ ++P + Y G + R L +++
Sbjct: 77 MEFKGNYGPHLIIVPNAVLVNWKSELHTWLPSVSCIYYVGTKDQRSKLFS-----QVKFE 131
Query: 849 RDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLL 908
+ F+V+VT+Y+ ++ D S L K+ W+Y+I+DEAQ +K +S + L + C+ RLLL
Sbjct: 132 K---FNVLVTTYEFIMYDRSKLSKVDWKYIIIDEAQRMKDRESVLARDLDRYRCQRRLLL 188
Query: 909 TGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESN--------TELNQEQ 960
TGTP+QN+++ELW+LL+ ++P +FD+ F DWF++ + ++ TE
Sbjct: 189 TGTPLQNDLKELWSLLNLLLPDVFDNRKAFHDWFAQPFQKEGPAHNIEDDWLETEKKVIV 248
Query: 961 LRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIEN 1020
+ RLH +L+PFMLRR ++V+ L K+ + + C ++ Q+ +Y +K+ + D
Sbjct: 249 IHRLHQILEPFMLRRRVEDVEGSLPAKVSVVLRCRMSAIQSAVYDWIKATGTLRVDP--- 305
Query: 1021 AAGNDDVTSDQK-----------LVNLVMEFRKVCNHP 1047
+D+ QK L N ME RK CNHP
Sbjct: 306 ---DDEKLRAQKNPIYQAKIYRTLNNRCMELRKACNHP 340
Score = 112 bits (281), Expect = 3e-24
Identities = 56/126 (44%), Positives = 84/126 (66%), Gaps = 4/126 (3%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKP-DIFIFLLST 1394
HRVL++ MTK++D++EEYL +R+ + R+DG++ L+DR + D+ D FIFLLS
Sbjct: 377 HRVLLFSTMTKLLDILEEYLQWRRLVYRRIDGTTSLEDRESAIVDFNDPDTDCFIFLLSI 436
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RA G G+NL ADTV+ YD D NP + QA+ RAHR+GQTR+V +++ + E++
Sbjct: 437 RAAGRGLNLQTADTVVIYDPDPNPKNEEQAVARAHRIGQTREV---KVIYMEAVVEKLSS 493
Query: 1455 RAKQKE 1460
K+ E
Sbjct: 494 HQKEDE 499
>CE11572 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1465
Score = 216 bits (550), Expect = 2e-55
Identities = 114/310 (36%), Positives = 186/310 (59%), Gaps = 22/310 (7%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L++YQL+GLNW+ + +G + ILADEMGLGKT+QSIS+LA L RY++ GP++VV P S
Sbjct: 405 LRDYQLEGLNWMVYAWCKGNSSILADEMGLGKTIQSISLLASLFHRYDLAGPYLVVVPLS 464
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKF-WDRKHLRYGRDAPFHVMVTSYQMVV 864
T+ W E +++ P+ ++ Y G+ R +R++ W + + + ++T+Y++++
Sbjct: 465 TMAAWQKEFAQWAPEMNLVVYMGDVVSRDMIRQYEW---FVGGTKKMKINAILTTYEILL 521
Query: 865 SDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALL 924
D ++L + W +++DEA +K+ +S +K+L F ++LL+TGTP+QN+++ELWALL
Sbjct: 522 KDKAFLSSIDWAALLVDEAHRLKNDESLLYKSLTQFRFNHKLLITGTPLQNSLKELWALL 581
Query: 925 HFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSEL 984
HFIMP FD +EF ++ E N + + LH L+PF+LRR+KK+V+ L
Sbjct: 582 HFIMPEKFDCWEEFE-----------TAHNESNHKGISALHKKLEPFLLRRVKKDVEKSL 630
Query: 985 GDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVC 1044
K E + D+T Q + Y+ + ++ Y + S VNLVME +K C
Sbjct: 631 PPKTEQILRVDMTAHQKQFYKWI---LTKNYRELSKGVKG----SINGFVNLVMELKKCC 683
Query: 1045 NHPDLFERAD 1054
NH L + D
Sbjct: 684 NHASLTRQYD 693
Score = 140 bits (352), Expect = 2e-32
Identities = 69/134 (51%), Positives = 95/134 (70%), Gaps = 1/134 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI-FIFLLST 1394
HRVLI+ QM M+D+++EYL R++ RLDGS + D R+ + + F FLLST
Sbjct: 728 HRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQALDHYNAPGSTDFAFLLST 787
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI +DSDWNP D QAM RAHR+GQT+ V +YRL+ +G++EE + +
Sbjct: 788 RAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTVNIYRLVTKGSVEEEIVE 847
Query: 1455 RAKQKEHVQQVVME 1468
RAK+K + +V++
Sbjct: 848 RAKRKLVLDHLVIQ 861
>Hs4557449 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1739
Score = 213 bits (543), Expect = 1e-54
Identities = 113/302 (37%), Positives = 189/302 (62%), Gaps = 22/302 (7%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L++YQL+GLNWLA+ + + + ILADEMGLGKT+Q+IS L++L ++ ++GPF++V P S
Sbjct: 484 LRDYQLEGLNWLAHSWCKNNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLIVVPLS 543
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKF-WDRKHLRYGRDAPFHVMVTSYQMVV 864
TL +W E + P+ ++ Y G+ R T+R++ W + F+ ++T+Y++++
Sbjct: 544 TLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHSQT---KRLKFNALITTYEILL 600
Query: 865 SDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALL 924
D + L + W ++ +DEA +K+ S +KTL+ F +RLL+TGTP+QN+++ELW+LL
Sbjct: 601 KDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLL 660
Query: 925 HFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSEL 984
HFIMP F+ ++F + K E+ +S LH VL+PF+LRR+KK+V+ L
Sbjct: 661 HFIMPEKFEFWEDFEEDHGKGRENGYQS-----------LHKVLEPFLLRRVKKDVEKSL 709
Query: 985 GDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVC 1044
K+E + +++ Q + Y+ + ++ Y A+ A G TS +N+VME +K C
Sbjct: 710 PAKVEQILRVEMSALQKQYYKWI---LTRNYKAL--AKGTRGSTSG--FLNIVMELKKCC 762
Query: 1045 NH 1046
NH
Sbjct: 763 NH 764
Score = 137 bits (345), Expect = 1e-31
Identities = 68/134 (50%), Positives = 96/134 (70%), Gaps = 1/134 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
+RVLI+ QM +M+D++ EYLT + Y RLDGS K + R+ + + + F FLLST
Sbjct: 808 NRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQALDHFNADGSEDFCFLLST 867
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL +ADTV+ +DSDWNP D QA RAHR+GQ +QV +YRL+ +GT+EE + +
Sbjct: 868 RAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGTVEEEIIE 927
Query: 1455 RAKQKEHVQQVVME 1468
RAK+K + +V++
Sbjct: 928 RAKKKMVLDHLVIQ 941
>Hs14149730 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1026
Score = 213 bits (543), Expect = 1e-54
Identities = 123/322 (38%), Positives = 196/322 (60%), Gaps = 23/322 (7%)
Query: 732 GEITIDQPKML--ACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLA 789
G I+QP +L + +LK YQ GLNWLA ++ G+NGILADEMGLGKT+Q+I+ LA+L
Sbjct: 481 GGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY 540
Query: 790 DRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGR 849
N GP ++V PAST+ NW+ E++ + P K+L Y+G+ +RK +R H RY
Sbjct: 541 QEGNN-GPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIRF---NIHSRY-- 594
Query: 850 DAPFHVMVTSYQMVVS---DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRL 906
++V+VT+Y +S D S +++K Y I DE +K+ S R++ L++ + NRL
Sbjct: 595 -EDYNVIVTTYNCAISSSDDRSLFRRLKLNYAIFDEGHMLKNMGSIRYQHLMTINANNRL 653
Query: 907 LLTGTPIQNNMQELWALLHFIMPSLFDSH-DEFSDWFSKDIESHAESNTELNQEQLRRLH 965
LLTGTP+QNN+ EL +LL+F+MP +F S E FS +S A+ + +E++
Sbjct: 654 LLTGTPVQNNLLELMSLLNFVMPHMFSSSTSEIRRMFSSKTKS-ADEQSIYEKERIAHAK 712
Query: 966 MVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGND 1025
++KPF+LRR+K+ V +L K + LC ++ +Q +LY L +++ + +E
Sbjct: 713 QIIKPFILRRVKEEVLKQLPPKKDRIELCAMSEKQEQLYLGLFNRLKKSINNLE------ 766
Query: 1026 DVTSDQKLVNLVMEFRKVCNHP 1047
+ ++ N++M+ RK+ NHP
Sbjct: 767 ---KNTEMCNVMMQLRKMANHP 785
Score = 129 bits (323), Expect = 5e-29
Identities = 62/128 (48%), Positives = 93/128 (72%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
RV+++ Q T M+D++E L + Q+ ++RLDG +++ +R L+ ++ T DIF+FLLST+A
Sbjct: 872 RVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIHLIDEFNTDMDIFVFLLSTKA 931
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GGLGINLT+A+ VI +D D NP D QA DR HR+GQT++V V +L+ +GTIEE M
Sbjct: 932 GGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKEVLVIKLISQGTIEESMLKIN 991
Query: 1457 KQKEHVQQ 1464
+QK ++Q
Sbjct: 992 QQKLKLEQ 999
>YER164w [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1468
Score = 211 bits (538), Expect = 5e-54
Identities = 120/366 (32%), Positives = 208/366 (56%), Gaps = 26/366 (7%)
Query: 697 QNASNALKETQDKARKFDEEDEE------DGELNFQNPTSLGEITIDQPKMLACTLKEYQ 750
+NA++ +K ++ + F + Q P ++++ P + L+++Q
Sbjct: 322 ENATDIVKLAPEQVKHFQNRENSKILPQYSSNYTSQRPR-FEKLSVQPPFIKGGELRDFQ 380
Query: 751 LKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNW 810
L G+NW+A L+ +G NGILADEMGLGKTVQ+++ ++ L GP I+V P ST+ W
Sbjct: 381 LTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAW 440
Query: 811 VNEISRFVPQFKILPYWGNANDRKTLR--KFWDRKHLRYGRDAPFHVMVTSYQMVVSDAS 868
++ ++ P + Y GN R T+R +F+ + + F+V++T+Y+ ++ D +
Sbjct: 441 LDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRA 500
Query: 869 YLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIM 928
L +KWQ+M +DEA +K+++SS +++L SF NR+L+TGTP+QNN++EL AL++F+M
Sbjct: 501 ELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLM 560
Query: 929 PSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKI 988
P F+ D E E+ E +E + LH ++PF+LRR+KK+V+ L K
Sbjct: 561 PGR----------FTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKT 610
Query: 989 EIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPD 1048
E + +L+ Q + Y K+ ++ Y A+ A + L+N++ E +K NHP
Sbjct: 611 ERILRVELSDVQTEYY---KNILTKNYSALTAGAKGGHFS----LLNIMNELKKASNHPY 663
Query: 1049 LFERAD 1054
LF+ A+
Sbjct: 664 LFDNAE 669
Score = 127 bits (320), Expect = 1e-28
Identities = 66/134 (49%), Positives = 91/134 (67%), Gaps = 3/134 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI--FIFLLS 1393
HRVLI+ QM +M+D++ +YL+ + RLDG+ RR + D PD F+FLLS
Sbjct: 712 HRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISI-DHFNSPDSNDFVFLLS 770
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLGINL ADTV+ +DSDWNP D QAM RAHR+GQ V VYRL+ + T+EE +
Sbjct: 771 TRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVL 830
Query: 1454 DRAKQKEHVQQVVM 1467
+RA++K ++ ++
Sbjct: 831 ERARKKMILEYAII 844
>Hs4557447 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1709
Score = 209 bits (532), Expect = 3e-53
Identities = 113/309 (36%), Positives = 184/309 (58%), Gaps = 20/309 (6%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L++YQL GLNWLA+ + +G + ILADEMGLGKT+Q+IS L +L + ++GPF++V P S
Sbjct: 481 LRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLS 540
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS 865
TL +W EI + Q + Y G+ N R +R H + F++++T+Y++++
Sbjct: 541 TLTSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWTHHQT--KRLKFNILLTTYEILLK 598
Query: 866 DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLH 925
D ++L + W ++ +DEA +K+ S +KTL+ F +RLL+TGTP+QN+++ELW+LLH
Sbjct: 599 DKAFLGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLH 658
Query: 926 FIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELG 985
FIMP F S ++F + K E S LH L+PF+LRR+KK+V+ L
Sbjct: 659 FIMPEKFSSWEDFEEEHGKGREYGYAS-----------LHKELEPFLLRRVKKDVEKSLP 707
Query: 986 DKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCN 1045
K+E + +++ Q + Y+ + ++ Y A+ + S +N++ME +K CN
Sbjct: 708 AKVEQILRMEMSALQKQYYKWI---LTRNYKALSKGSKG----STSGFLNIMMELKKCCN 760
Query: 1046 HPDLFERAD 1054
H L + D
Sbjct: 761 HCYLIKPPD 769
Score = 139 bits (350), Expect = 3e-32
Identities = 74/171 (43%), Positives = 107/171 (62%), Gaps = 3/171 (1%)
Query: 1299 NNSFTSYIEMPSMDRFITESAXXXXXXXXXXXXXXXXHRVLIYFQMTKMMDLMEEYLTYR 1358
NN F Y + ++ I S +RVLI+ QM +M+D++ EYL YR
Sbjct: 770 NNEF--YNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYR 827
Query: 1359 QYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLSTRAGGLGINLTAADTVIFYDSDWN 1417
Q+ RLDGS K + R+ + + + + F FLLSTRAGGLGINL +ADTV+ +DSDWN
Sbjct: 828 QFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWN 887
Query: 1418 PTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVME 1468
P D QA RAHR+GQ +QV +YRL+ +G++EE + +RAK+K + +V++
Sbjct: 888 PQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQ 938
>Hs4557451 [R] KOG0383 Predicted helicase
Length = 1944
Score = 207 bits (528), Expect = 8e-53
Identities = 128/371 (34%), Positives = 217/371 (57%), Gaps = 34/371 (9%)
Query: 705 ETQDKARKFDEEDEE-DGELNFQNPTSLGEITID-QPKMLACT---LKEYQLKGLNWLAN 759
E + RK+ ++ +E G+ +PT+ + + QP+ + T L YQL+GLNWL
Sbjct: 690 EDPAQPRKYKKKKKELQGDGPPSSPTNDPTVKYETQPRFITATGGTLHMYQLEGLNWLRF 749
Query: 760 LYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVP 819
+ QG + ILADEMGLGKT+Q+I L L + GPF+V P ST+ NW E + P
Sbjct: 750 SWAQGTDTILADEMGLGKTIQTIVFLYSLYKEGHTKGPFLVSAPLSTIINWEREFQMWAP 809
Query: 820 QFKILPYWGNANDRKTLRK----FWD------RKHLRYGRDA--PFHVMVTSYQMVVSDA 867
+F ++ Y G+ + R +R+ F D +K + R+A FHV++TSY+++ D
Sbjct: 810 KFYVVTYTGDKDSRAIIRENEFSFEDNAIKGGKKAFKMKREAQVKFHVLLTSYELITIDQ 869
Query: 868 SYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFI 927
+ L ++W +++DEA +K++QS ++ L + ++LLLTGTP+QNN++EL+ LL+F+
Sbjct: 870 AALGSIRWACLVVDEAHRLKNNQSKFFRVLNGYKIDHKLLLTGTPLQNNLEELFHLLNFL 929
Query: 928 MPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDK 987
P F++ + F + F+ DI ++Q+++LH +L P MLRR+K +V + K
Sbjct: 930 TPERFNNLEGFLEEFA-DIS---------KEDQIKKLHDLLGPHMLRRLKADVFKNMPAK 979
Query: 988 IEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP 1047
E+ V +L+ Q K Y+ + ++ ++A+ + G + V+ L+N++M+ +K CNHP
Sbjct: 980 TELIVRVELSPMQKKYYKYI---LTRNFEALNSRGGGNQVS----LLNIMMDLKKCCNHP 1032
Query: 1048 DLFERADVMSP 1058
LF A + SP
Sbjct: 1033 YLFPVAAMESP 1043
Score = 129 bits (324), Expect = 4e-29
Identities = 66/133 (49%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVLI+ QMTKM+DL+E++L Y Y + R+DG R++ + + F FLLST
Sbjct: 1077 HRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAIDRFNAPGAQQFCFLLST 1136
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI +DSDWNP D QA RAHR+GQ +V +YR + R ++EER+
Sbjct: 1137 RAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKVMIYRFVTRASVEERITQ 1196
Query: 1455 RAKQKEHVQQVVM 1467
AK+K + +V+
Sbjct: 1197 VAKRKMMLTHLVV 1209
>SPAC1783.05 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1373
Score = 207 bits (526), Expect = 1e-52
Identities = 113/308 (36%), Positives = 183/308 (58%), Gaps = 17/308 (5%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
++++QL G+NW+A L+ + NGILADEMGLGKTVQ++ L++L GPF++V P S
Sbjct: 390 IRDFQLTGINWMAYLWHRNENGILADEMGLGKTVQTVCFLSYLVHSLKQHGPFLIVVPLS 449
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS 865
T+ W ++ + P + Y GN R +R++ + R F++++T+Y+ ++
Sbjct: 450 TVPAWQETLANWTPDLNSICYTGNTESRANIREY-EFYLSTNSRKLKFNILLTTYEYILK 508
Query: 866 DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLH 925
D L ++WQY+ +DEA +K+S+SS ++TL F NRLL+TGTP+QNN++EL +L++
Sbjct: 509 DKQELNNIRWQYLAIDEAHRLKNSESSLYETLSQFRTANRLLITGTPLQNNLKELASLVN 568
Query: 926 FIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELG 985
F+MP F DE + + N E + +R L L+PF+LRR+KK+V+ L
Sbjct: 569 FLMPGKFYIRDEL---------NFDQPNAE-QERDIRDLQERLQPFILRRLKKDVEKSLP 618
Query: 986 DKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCN 1045
K E + +L+ Q + Y K+ ++ Y A+ G+ D L+N+V+E +KV N
Sbjct: 619 SKSERILRVELSDMQTEWY---KNILTKNYRAL---TGHTDGRGQLSLLNIVVELKKVSN 672
Query: 1046 HPDLFERA 1053
HP LF A
Sbjct: 673 HPYLFPGA 680
Score = 131 bits (330), Expect = 7e-30
Identities = 67/134 (50%), Positives = 92/134 (68%), Gaps = 3/134 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT--KPDIFIFLLS 1393
HRVLI+ QM +M++++ EY++ R Y + RLDG+ RR + + PD F+FLLS
Sbjct: 721 HRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPASVRRVSIDHFNAPDSPD-FVFLLS 779
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLGINL ADTVI +DSDWNP D QAM RAHR+GQ V VYR L + T+EE +
Sbjct: 780 TRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVNVYRFLSKDTVEEDIL 839
Query: 1454 DRAKQKEHVQQVVM 1467
+RA++K ++ ++
Sbjct: 840 ERARRKMILEYAII 853
>Hs21914927 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 838
Score = 206 bits (525), Expect = 2e-52
Identities = 157/529 (29%), Positives = 249/529 (46%), Gaps = 84/529 (15%)
Query: 621 KKLNFLLTQTELYSHFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVES 680
++L LL ++ +YS F+ +K++ +LE K K+ ++ K S
Sbjct: 66 RRLQHLLEKSNIYSKFLLTKMEQQQLEE----------QKKKEKLERKKESLKVKKGKNS 115
Query: 681 IDFATEDDEKLRLMAAQNASNALKETQDKAR--------KFDEEDEEDGELNF------Q 726
ID + E + ++ S + E K K + EDE N +
Sbjct: 116 IDASEEKPVMRKKRGREDESYNISEVMSKEEILSVAKKNKKENEDENSSSTNLCVEDLQK 175
Query: 727 NPTS-------LGE--------------------ITIDQPK-MLACTLKEYQLKGLNWLA 758
N S L E + QPK ++ YQ++G+ WL
Sbjct: 176 NKDSNSIIKDRLSETVRQNTKFFFDPVRKCNGQPVPFQQPKHFTGGVMRWYQVEGMEWLR 235
Query: 759 NLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFV 818
L++ GINGILADEMGLGKTVQ I+ +A + R + GPF+V P STL NW+ E RF
Sbjct: 236 MLWENGINGILADEMGLGKTVQCIATIALMIQR-GVPGPFLVCGPLSTLPNWMAEFKRFT 294
Query: 819 PQFKILPYWGNANDR-KTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQY 877
P + Y G +R K +R + RK G V++TS+++ + D + LQ W+Y
Sbjct: 295 PDIPTMLYHGTQEERQKLVRNIYKRK----GTLQIHPVVITSFEIAMRDRNALQHCYWKY 350
Query: 878 MILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDE 937
+I+DE IK+ + + L F+ N+LLLTGTP+QNN+ ELW+LL+F++P +FD
Sbjct: 351 LIVDEGHRIKNMKCRLIRELKRFNADNKLLLTGTPLQNNLSELWSLLNFLLPDVFDDLKS 410
Query: 938 FSDWFSKDIESHAESNTEL-----NQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDV 992
F WF DI S +E+ ++ Q L LH +L PF+LRR+K +V E+ K E+ V
Sbjct: 411 FESWF--DITSLSETAEDIIAKEREQNVLHMLHQILTPFLLRRLKSDVALEVPPKREVVV 468
Query: 993 LCDLTFRQAKLYQVLKSQV------SGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNH 1046
L+ +Q Y + ++ S + IE + +K +N + K+ +
Sbjct: 469 YAPLSKKQEIFYTAIVNRTIANMFGSSEKETIELSPTGRPKRRTRKSIN----YSKIDDF 524
Query: 1047 PDLFERADVMSPFSFVSFGESASLSREGDFVEVNYSAKNLINYNLPRLI 1095
P+ E+ ++S + RE VEVN ++ +N L ++
Sbjct: 525 PNELEK--LISQI-------QPEVDRERAVVEVNIPVESEVNLKLQNIM 564
Score = 150 bits (379), Expect = 1e-35
Identities = 70/148 (47%), Positives = 101/148 (67%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
H+VL++ QMT M+D++ +Y R + RLDGS +R +H + T P++FIFL+STR
Sbjct: 616 HKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTR 675
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGGLGINLTAADTVI YDSDWNP D QA DR HR+GQT+ V VYRL+ TI++++ +R
Sbjct: 676 AGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVER 735
Query: 1456 AKQKEHVQQVVMEGKAKENKQKIIEVEK 1483
A K ++++++ + Q + + K
Sbjct: 736 AAAKRKLEKLIIHKNHFKGGQSGLNLSK 763
>Hs20536191 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 897
Score = 206 bits (524), Expect = 2e-52
Identities = 121/308 (39%), Positives = 180/308 (58%), Gaps = 26/308 (8%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L+ YQL+G+NWLA + IL DEMGLGKT Q+I++ +LA R N GPF+++ P S
Sbjct: 46 LRSYQLEGVNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPLS 105
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS 865
L NW E+ RF P + Y G+ +R L++ D K +++ FHV++T+Y++ +
Sbjct: 106 VLSNWKEEMQRFAPGLSCVTYAGDKEERACLQQ--DLK-----QESRFHVLLTTYEICLK 158
Query: 866 DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLH 925
DAS+L+ W +++DEA +K+ S KTL F LLLTGTPIQN++QEL++LL
Sbjct: 159 DASFLKSFPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLS 218
Query: 926 FIMPSLFDSHDEFSDWFSK--DIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSE 983
F+ P LF S +E D+ + DIE +ES E LH +L+PF+LRR+K V +E
Sbjct: 219 FVEPDLF-SKEEVGDFIQRYQDIEKESESGNE--------LHKLLQPFLLRRVKAEVATE 269
Query: 984 LGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKV 1043
L K E+ + ++ Q K Y K+ + DA EN + KL N++ + RK
Sbjct: 270 LPKKTEVVIYHGMSALQKKYY---KAILMKDLDAFEN-----ETAKKVKLQNILSQLRKC 321
Query: 1044 CNHPDLFE 1051
+HP LF+
Sbjct: 322 VDHPYLFD 329
Score = 136 bits (342), Expect = 3e-31
Identities = 67/134 (50%), Positives = 100/134 (74%), Gaps = 1/134 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
HRVL++ QMT+M+D++++Y+ YR Y++ R+DGS + ++R + ++ +P IF+FLLSTR
Sbjct: 364 HRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGQQP-IFVFLLSTR 422
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG+G+NLTAADTVIF DSD+NP D QA RAHR+GQ + V V RL+ R T+EE + +
Sbjct: 423 AGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEEIVYRK 482
Query: 1456 AKQKEHVQQVVMEG 1469
A K + +++EG
Sbjct: 483 AASKLQLTNMIIEG 496
>CE03657 [R] KOG0383 Predicted helicase
Length = 1787
Score = 206 bits (523), Expect = 3e-52
Identities = 125/380 (32%), Positives = 209/380 (54%), Gaps = 33/380 (8%)
Query: 738 QPKMLACT---LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNI 794
QP ++ T L YQL+G+NWL + + G + ILADEMGLGKTVQS++ L L +
Sbjct: 605 QPDFISETGGNLHPYQLEGINWLRHCWSNGTDAILADEMGLGKTVQSLTFLYTLMKEGHT 664
Query: 795 WGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRK----FWDR-------- 842
GPF++ P ST+ NW E + P F ++ Y G+ R +R+ F D
Sbjct: 665 KGPFLIAAPLSTIINWEREAELWCPDFYVVTYVGDRESRMVIREHEFSFVDGAVRGGPKV 724
Query: 843 KHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHC 902
++ + FHV++TSY+ + D + L + W +++DEA +K++QS+ +K L ++
Sbjct: 725 SKIKTLENLKFHVLLTSYECINMDKAILSSIDWAALVVDEAHRLKNNQSTFFKNLREYNI 784
Query: 903 RNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLR 962
+ R+LLTGTP+QNN++EL+ LL+F+ P F+ + F+ AE + ++Q+
Sbjct: 785 QYRVLLTGTPLQNNLEELFHLLNFLAPDRFNQLESFT----------AEFSEISKEDQIE 834
Query: 963 RLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAA 1022
+LH +L P MLRR+K +V + + K E+ V +L+ Q K Y K+ ++ +DA+
Sbjct: 835 KLHNLLGPHMLRRLKADVLTGMPSKQELIVRVELSAMQKKYY---KNILTRNFDALNVKN 891
Query: 1023 GNDDVTSDQKLVNLVMEFRKVCNHPDLFERADVMSP-FSFVSFGESASLSREGDFVEVNY 1081
G + L+N++ME +K CNHP LF +A + +P + SA + G FV +
Sbjct: 892 GG----TQMSLINIIMELKKCCNHPYLFMKACLEAPKLKNGMYEGSALIKNAGKFVLLQK 947
Query: 1082 SAKNLINYNLPRLIYDELVV 1101
+ L + LI+ ++ +
Sbjct: 948 MLRKLKDGGHRVLIFSQMTM 967
Score = 131 bits (329), Expect = 9e-30
Identities = 69/143 (48%), Positives = 93/143 (64%), Gaps = 3/143 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVLI+ QMT M+D++E++ Y + R+DGS R+D + + F+FLLST
Sbjct: 957 HRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQDAIDRYNAPGAKQFVFLLST 1016
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI YDSDWNP D QA RAHRLGQ +V +YR + +G++EER+
Sbjct: 1017 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKGSVEERITS 1076
Query: 1455 RAKQKEHVQQVVMEG--KAKENK 1475
AK+K + +V+ AK+ K
Sbjct: 1077 VAKKKMLLTHLVVRAGLGAKDGK 1099
>Hs20533808 [R] KOG0383 Predicted helicase
Length = 1954
Score = 205 bits (521), Expect = 5e-52
Identities = 135/418 (32%), Positives = 223/418 (53%), Gaps = 44/418 (10%)
Query: 745 TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPA 804
TL YQL+GLNWL + QG + ILADEMGLGKTVQ+I L L + GP++V P
Sbjct: 699 TLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPL 758
Query: 805 STLHNWVNEISRFVPQFKILPYWGNANDRKTLRK---FWDRKHLRYGR---------DAP 852
ST+ NW E + P F ++ Y G+ R +R+ ++ +R G+
Sbjct: 759 STIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIK 818
Query: 853 FHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTP 912
FHV++TSY+++ D + L ++W +++DEA +K++QS ++ L S+ +LLLTGTP
Sbjct: 819 FHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTP 878
Query: 913 IQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFM 972
+QNN++EL+ LL+F+ P F++ + F + F+ DI ++Q+++LH +L P M
Sbjct: 879 LQNNLEELFHLLNFLTPERFNNLEGFLEEFA-DIS---------KEDQIKKLHDLLGPHM 928
Query: 973 LRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQK 1032
LRR+K +V + K E+ V +L+ Q K Y+ + ++ ++A+ + G + V+
Sbjct: 929 LRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFI---LTRNFEALNSKGGGNQVS---- 981
Query: 1033 LVNLVMEFRKVCNHPDLFERADVMSP-FSFVSFGESASLSREGDFVEVNYSAKNLINYNL 1091
L+N++M+ +K CNHP LF A V +P S+ S+ + G + + K L +
Sbjct: 982 LLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGH 1041
Query: 1092 PRLIY-----------DELVVPNYNN---DVDVRAKLLYHTMNIFHPANSFQLCFILS 1135
LI+ D L Y D + L ++ F+ + Q CF+LS
Sbjct: 1042 RVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLS 1099
Score = 132 bits (331), Expect = 5e-30
Identities = 67/133 (50%), Positives = 90/133 (67%), Gaps = 1/133 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVLI+ QMTKM+DL+E++L Y Y + R+DG R++ + + F FLLST
Sbjct: 1041 HRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLST 1100
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI YDSDWNP D QA RAHR+GQ ++V +YR + R ++EER+
Sbjct: 1101 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 1160
Query: 1455 RAKQKEHVQQVVM 1467
AK+K + +V+
Sbjct: 1161 VAKRKMMLTHLVV 1173
>At2g44980 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 861
Score = 204 bits (520), Expect = 7e-52
Identities = 124/318 (38%), Positives = 190/318 (58%), Gaps = 24/318 (7%)
Query: 742 LACTLKEYQLKGLNWLANLYDQGINGILA-DEMGLGKTVQSISVLAHLADRYNIWGPFIV 800
+ TLK +Q++G++WL Y G+N +L D+MGLGKT+Q+IS L++L R + GPF+V
Sbjct: 47 VTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFLSYLKFRQGLPGPFLV 106
Query: 801 VTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRK-FWDRKHLRYGRDAPFHVMVTS 859
+ P S WV+EI+RF P ++L Y G+ R +RK +D H PF V++T+
Sbjct: 107 LCPLSVTDGWVSEINRFTPNLEVLRYVGDKYCRLDMRKSMYDHGHF-----LPFDVLLTT 161
Query: 860 YQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLL-SFHCRNRLLLTGTPIQNNMQ 918
Y + + D +L ++ WQY I+DEAQ +K+ S + LL F RLL+TGTPIQNN+
Sbjct: 162 YDIALVDQDFLSQIPWQYAIIDEAQRLKNPNSVLYNVLLEQFLIPRRLLITGTPIQNNLT 221
Query: 919 ELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKK 978
ELWAL+HF MP +F + D+F F + + SN ++E + L +L FMLRR K
Sbjct: 222 ELWALMHFCMPLVFGTLDQFLSAFKETGDGLDVSN---DKETYKSLKFILGAFMLRR-TK 277
Query: 979 NVQSELGDKI-----EIDVLCDLTFRQAKLY-QVLKSQVSGGYDAIENAAGNDDVTSDQK 1032
++ E G+ + E+ V+ L Q K+Y +L+ ++ G +E ++G + TS
Sbjct: 278 SLLIESGNLVLPPLTELTVMVPLVSLQKKIYTSILRKELPG---LLELSSGGSNHTS--- 331
Query: 1033 LVNLVMEFRKVCNHPDLF 1050
L N+V++ RK C+HP LF
Sbjct: 332 LQNIVIQLRKACSHPYLF 349
Score = 122 bits (307), Expect = 3e-27
Identities = 58/152 (38%), Positives = 97/152 (63%), Gaps = 11/152 (7%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPD--------- 1386
HRVL++ QMT +D++++++ R+Y++ RLDGS + ++R + ++ K +
Sbjct: 385 HRVLLFSQMTSTLDILQDFMELRRYSYERLDGSVRAEERFAAIKNFSAKTERGLDSEVDG 444
Query: 1387 --IFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLI 1444
F+F++STRAGG+G+NL AADTVIFY+ DWNP +D QA+ RAHR+GQ V L+
Sbjct: 445 SNAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDKQALQRAHRIGQISHVLSINLVT 504
Query: 1445 RGTIEERMRDRAKQKEHVQQVVMEGKAKENKQ 1476
++EE + RA++K + V+ +E ++
Sbjct: 505 EHSVEEVILRRAERKLQLSHNVVGDNMEEKEE 536
>At2g25170 [R] KOG0383 Predicted helicase
Length = 1359
Score = 202 bits (515), Expect = 2e-51
Identities = 127/375 (33%), Positives = 204/375 (53%), Gaps = 40/375 (10%)
Query: 697 QNASNALKETQDKARKFDEEDEEDGELNFQN----PTSLGEITIDQPKMLACTLKEYQLK 752
QN K+ + R+ + D + +FQ P L ++ I + L YQL+
Sbjct: 220 QNEIQRFKDVNSRTRRSKDVDHKRNPRDFQQFDHTPEFLKDVMIYLFPAIEGLLHPYQLE 279
Query: 753 GLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVN 812
GLN+L + + + ILADEMGLGKT+QSI++LA L + I P +V+ P STL NW
Sbjct: 280 GLNFLRFSWSKQTHVILADEMGLGKTIQSIALLASLFEENLI--PHLVIAPLSTLRNWER 337
Query: 813 EISRFVPQFKILPYWGNANDRKTLRK--FW---DRKHLRYGRDAP-----------FHVM 856
E + + PQ ++ Y+G A R +R+ F+ D+K ++ + F V+
Sbjct: 338 EFATWAPQMNVVMYFGTAQARAVIREHEFYLSKDQKKIKKKKSGQISSESKQKRIKFDVL 397
Query: 857 VTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNN 916
+TSY+M+ D++ L+ +KW+ MI+DE +K+ S + +L + +R+LLTGTP+QNN
Sbjct: 398 LTSYEMINLDSAVLKPIKWECMIVDEGHRLKNKDSKLFSSLTQYSSNHRILLTGTPLQNN 457
Query: 917 MQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRI 976
+ EL+ L+HF+ F S +EF + F KDI +EQ+ RLH +L P +LRR+
Sbjct: 458 LDELFMLMHFLDAGKFGSLEEFQEEF-KDIN---------QEEQISRLHKMLAPHLLRRV 507
Query: 977 KKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNL 1036
KK+V ++ K E+ + DL+ Q + Y+ + ++ Y + G + L N+
Sbjct: 508 KKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTR---NYQVLTKKGG-----AQISLNNI 559
Query: 1037 VMEFRKVCNHPDLFE 1051
+ME RKVC HP + E
Sbjct: 560 MMELRKVCCHPYMLE 574
Score = 140 bits (353), Expect = 2e-32
Identities = 75/138 (54%), Positives = 97/138 (69%), Gaps = 2/138 (1%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVLIY Q M+DL+E+Y T++++ + R+DG +R+ + + K + F FLLST
Sbjct: 612 HRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIRIDRFNAKNSNKFCFLLST 671
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI YDSDWNP D QAM RAHRLGQT +V +YRL+ RGTIEERM
Sbjct: 672 RAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNKVMIYRLINRGTIEERMMQ 731
Query: 1455 RAKQKEHVQQVVMEGKAK 1472
K+K ++ +V+ GK K
Sbjct: 732 LTKKKMVLEHLVV-GKLK 748
>SPCC1235.05c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1284
Score = 202 bits (513), Expect = 4e-51
Identities = 127/357 (35%), Positives = 203/357 (56%), Gaps = 32/357 (8%)
Query: 720 DGELNFQN----PTSLGE------ITIDQPKMLACT--LKEYQLKGLNWLANLYDQGING 767
+GELN + PT + +QPK LA LK YQL G+NWL LY Q ++G
Sbjct: 512 NGELNIVDMESVPTEAADNSDFPKFVTEQPKTLASDVQLKSYQLVGVNWLHLLYQQKLSG 571
Query: 768 ILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYW 827
ILADEMGLGKT Q ++ A L ++ + GP +VV P+STL NW+ E++RF P ++ PY+
Sbjct: 572 ILADEMGLGKTCQVVAFFALLLEQGH-HGPHLVVVPSSTLENWLRELARFCPSLRVEPYY 630
Query: 828 GNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS---DASYLQKMKWQYMILDEAQ 884
G+ +R +R+ + ++Y ++VT+YQ+ + D S+L+ + + DE
Sbjct: 631 GSQQERANIREAIEENEIKYD------ILVTTYQLATNNKEDRSFLKHQNFDVCVYDEGH 684
Query: 885 AIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSK 944
+K+ S R+K L++ + RLLLTGTP+QNN++EL +LL FI+P++FDS + D K
Sbjct: 685 YLKNRMSERYKHLMNLNANFRLLLTGTPLQNNLKELVSLLAFILPNMFDSDMDDLDVIFK 744
Query: 945 DIESHAESNTE---LNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQA 1001
+ A+++ E L+++++ R ++ PF+LRR K V ++L K +I C L+ Q
Sbjct: 745 -AKPTADADIEQALLSKQRISRAKTMMTPFVLRRRKNQVLNDLPKKTQIIEHCKLSENQL 803
Query: 1002 KLYQ---VLKSQVSGGYDAIENAAGNDDVTSDQKLV---NLVMEFRKVCNHPDLFER 1052
++Y L+ D N +D SD K + +++M+ RK NH LF +
Sbjct: 804 EIYNRYAALQKNQQLRRDDKRNKRSKNDEESDGKSLSAGHVLMQLRKAANHALLFRK 860
Score = 122 bits (305), Expect = 6e-27
Identities = 57/123 (46%), Positives = 88/123 (71%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
R+L++ Q T+M+D++E+ L + +++RLDGS++++ R+D++ + + D+ +FLLST+A
Sbjct: 942 RILLFSQFTQMLDILEQVLDTLKISYVRLDGSTQVEVRQDIIDQFHKEEDVTVFLLSTKA 1001
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GG GINL A+ VI YD +NP D QA DRAHR+GQ R+VTV RL+ TIEE ++ A
Sbjct: 1002 GGFGINLACANVVILYDCSYNPFDDLQAEDRAHRVGQVREVTVIRLITDNTIEEYIQKLA 1061
Query: 1457 KQK 1459
K
Sbjct: 1062 NTK 1064
>SPAC3G6.01 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1388
Score = 202 bits (513), Expect = 4e-51
Identities = 114/314 (36%), Positives = 181/314 (57%), Gaps = 34/314 (10%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L+++QL G+NW+A L+ + NGILADEMGLGKTVQ+++ L++LA GPF+VV P S
Sbjct: 375 LRDFQLTGVNWMAYLWHKNENGILADEMGLGKTVQTVAFLSYLAHSLRQHGPFLVVVPLS 434
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS 865
T+ W ++ + + Y GN R+ +R + ++ + F++++T+Y+ V+
Sbjct: 435 TVPAWQETLALWASDMNCISYLGNTTSRQVIRDY--EFYVDGTQKIKFNLLLTTYEYVLK 492
Query: 866 DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLH 925
D S L +KWQYM +DEA +K+S+SS ++ L F NRLL+TGTP+QNN++EL AL+
Sbjct: 493 DRSVLSNIKWQYMAIDEAHRLKNSESSLYEALSQFKNSNRLLITGTPLQNNIRELAALVD 552
Query: 926 FIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELG 985
F+MP F+ +E + E+ E + +R L L+P++LRR+KK+V+ L
Sbjct: 553 FLMPGKFEIREEI----------NLEAPDEEQEAYIRSLQEHLQPYILRRLKKDVEKSLP 602
Query: 986 DKIEIDVLCDLTFRQ--------AKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLV 1037
K E + +L+ Q + Y+VL +S G S L+N+V
Sbjct: 603 SKSERILRVELSDLQMYWYKNILTRNYRVLTQSISSG--------------SQISLLNIV 648
Query: 1038 MEFRKVCNHPDLFE 1051
+E +K NHP LF+
Sbjct: 649 VELKKASNHPYLFD 662
Score = 136 bits (343), Expect = 2e-31
Identities = 75/154 (48%), Positives = 99/154 (63%), Gaps = 7/154 (4%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT--KPDIFIFLLS 1393
HRVLI+ QM +M+D++ +YL+ R Y H RLDG+ RR + + PD F+FLLS
Sbjct: 707 HRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSIDHFNAPNSPD-FVFLLS 765
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLGINL ADTVI +DSDWNP D QAM RAHR+GQ V VYRLL + TIEE +
Sbjct: 766 TRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLLSKDTIEEDVL 825
Query: 1454 DRAKQKEHVQQVVME----GKAKENKQKIIEVEK 1483
+RA++K ++ ++ K K +K E+
Sbjct: 826 ERARRKMILEYAIISLGVTDKQKNSKNDKFSAEE 859
>CE17716 [R] KOG0383 Predicted helicase
Length = 1829
Score = 201 bits (511), Expect = 7e-51
Identities = 122/367 (33%), Positives = 200/367 (54%), Gaps = 30/367 (8%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L YQL+GLNWL + + G + ILADEMGLGKTVQS++ L L + GPF++ P S
Sbjct: 602 LHPYQLEGLNWLRHCWSNGTDAILADEMGLGKTVQSLTFLYSLMKEGHCKGPFLIAAPLS 661
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFW------------DRKHLRYGRDAPF 853
T+ NW E ++ P F ++ Y G + R LR+ ++ + F
Sbjct: 662 TIINWEREAEQWCPDFYVVTYVGLRDARVVLREHEFSFVEGAVRSGPKASKMKTTENMKF 721
Query: 854 HVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPI 913
HV++TSY+ + D + L ++W +++DEA +K++QS +K L + R+LLTGTP+
Sbjct: 722 HVLLTSYETINMDKTILSSIEWGALVVDEAHRLKNNQSLFFKNLNEYTIHYRVLLTGTPL 781
Query: 914 QNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFML 973
QNN++EL+ LL+F+ F+ + F+ AE N ++Q+ +LH +L P ML
Sbjct: 782 QNNLEELFHLLNFLSKERFNQLEAFT----------AEFNEISKEDQIEKLHNLLGPHML 831
Query: 974 RRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKL 1033
RR+K +V + + K E+ V +L+ Q K Y K+ ++ +DA+ G + L
Sbjct: 832 RRLKADVLTGMPSKSELIVRVELSAMQKKWY---KNILTRNFDALNVKNGG----TQMSL 884
Query: 1034 VNLVMEFRKVCNHPDLFERADVMSPFSFVSFGE-SASLSREGDFVEVNYSAKNLINYNLP 1092
+N++ME +K CNHP LF +A++ +P E +A + G FV + + L +
Sbjct: 885 MNVLMELKKCCNHPYLFVKAELEAPKEKNGMYEGTALIKNSGKFVLLQKMLRKLKDGGHR 944
Query: 1093 RLIYDEL 1099
LI+ ++
Sbjct: 945 VLIFSQM 951
Score = 130 bits (327), Expect = 2e-29
Identities = 67/133 (50%), Positives = 89/133 (66%), Gaps = 1/133 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVLI+ QMT+M+D+ME+ Y Y + R+DGS R+D + + FIFLLST
Sbjct: 943 HRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAIDRYNAPGAQQFIFLLST 1002
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI YDSDWNP D QA RAHRLGQ +V +YR + + ++EE++
Sbjct: 1003 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKVMIYRFVTKKSVEEKITS 1062
Query: 1455 RAKQKEHVQQVVM 1467
AK+K + +V+
Sbjct: 1063 VAKKKMLLNHLVV 1075
>Hs4557453 [R] KOG0383 Predicted helicase
Length = 1912
Score = 200 bits (508), Expect = 2e-50
Identities = 132/418 (31%), Positives = 220/418 (52%), Gaps = 44/418 (10%)
Query: 745 TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPA 804
TL YQ++GLNWL + QG + ILADEMGLGKTVQ+ L L + GPF+V P
Sbjct: 725 TLHPYQMEGLNWLRFSWAQGTDTILADEMGLGKTVQTAVFLYSLYKEGHSKGPFLVSAPL 784
Query: 805 STLHNWVNEISRFVPQFKILPYWGNANDRKTLRK---FWDRKHLRYGRDAP--------- 852
ST+ NW E + P ++ Y G+ + R +R+ ++ +R G+ A
Sbjct: 785 STIINWEREFEMWAPDMYVVTYVGDKDSRAIIRENEFSFEDNAIRGGKKASRMKKEASVK 844
Query: 853 FHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTP 912
FHV++TSY+++ D + L + W +I+DEA +K++QS ++ L + +++LLLTGTP
Sbjct: 845 FHVLLTSYELITIDMAILGSIDWACLIVDEAHRLKNNQSKFFRVLNGYSLQHKLLLTGTP 904
Query: 913 IQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFM 972
+QNN++EL+ LL+F+ P F + + F + F+ DI ++Q+++LH +L P M
Sbjct: 905 LQNNLEELFHLLNFLTPERFHNLEGFLEEFA-DI---------AKEDQIKKLHDMLGPHM 954
Query: 973 LRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQK 1032
LRR+K +V + K E+ V +L+ Q K Y+ + ++ ++A+ G + V+
Sbjct: 955 LRRLKADVFKNMPSKTELIVRVELSPMQKKYYKYI---LTRNFEALNARGGGNQVS---- 1007
Query: 1033 LVNLVMEFRKVCNHPDLFERADVMSP-FSFVSFGESASLSREGDFVEVNYSAKNLINYNL 1091
L+N+VM+ +K CNHP LF A + +P + SA + G + + KNL
Sbjct: 1008 LLNVVMDLKKCCNHPYLFPVAAMEAPKMPNGMYDGSALIRASGKLLLLQKMLKNLKEGGH 1067
Query: 1092 PRLIYDELVVP-------------NYNN-DVDVRAKLLYHTMNIFHPANSFQLCFILS 1135
LI+ ++ Y D + + ++ F+ + Q CF+LS
Sbjct: 1068 RVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLS 1125
Score = 131 bits (329), Expect = 9e-30
Identities = 66/133 (49%), Positives = 91/133 (67%), Gaps = 1/133 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVLI+ QMTKM+DL+E++L + Y + R+DG + R++ + + F FLLST
Sbjct: 1067 HRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAIDRFNAPGAQQFCFLLST 1126
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI YDSDWNP D QA RAHR+GQ ++V +YR + R ++EER+
Sbjct: 1127 RAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQ 1186
Query: 1455 RAKQKEHVQQVVM 1467
AK+K + +V+
Sbjct: 1187 VAKKKMMLTHLVV 1199
>7295870 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1883
Score = 200 bits (508), Expect = 2e-50
Identities = 126/420 (30%), Positives = 220/420 (52%), Gaps = 46/420 (10%)
Query: 737 DQPKMLAC--TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNI 794
+QP+ L+ TL++YQ+ GLNWL + + + + ILADEMGLGKT+Q+I L L +++
Sbjct: 517 NQPEFLSSGLTLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHL 576
Query: 795 WGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKF-WDRKHLRYGRDAPF 853
+GPF+ V P ST+ W E + P ++ Y G+ R+ ++++ W + F
Sbjct: 577 YGPFLCVVPLSTMTAWQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQ---FESSKRLKF 633
Query: 854 HVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPI 913
+ ++T+Y++V+ D +L ++W +++DEA +K+ S +K+L F +RLL+TGTP+
Sbjct: 634 NCILTTYEIVLKDKQFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPL 693
Query: 914 QNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFML 973
QN+++ELWALLHFIMP D+F W + +++ N E + RLH L+P++L
Sbjct: 694 QNSLKELWALLHFIMP------DKFDTWENFEVQ---HGNAE--DKGYTRLHQQLEPYIL 742
Query: 974 RRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKL 1033
RR+KK+V+ L K+E + ++T Q + Y+ + ++ +DA+ S
Sbjct: 743 RRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWI---LTKNFDALRKGKRG----STSTF 795
Query: 1034 VNLVMEFRKVCNHPDLFERADVMSPFSFVSFGESASLSR----EGDFVEVNYSAKNLINY 1089
+N+V+E +K CNH L S F + + +L G V ++ L
Sbjct: 796 LNIVIELKKCCNHAALIR----PSEFELMGLQQDEALQTLLKGSGKLVLLDKLLCRLKET 851
Query: 1090 NLPRLIYDELV--------------VPNYNNDVDVRAKLLYHTMNIFHPANSFQLCFILS 1135
LI+ ++V P D ++ ++ ++ F+ S CF+LS
Sbjct: 852 GHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLS 911
Score = 132 bits (331), Expect = 5e-30
Identities = 68/134 (50%), Positives = 92/134 (67%), Gaps = 1/134 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVLI+ QM +M+D++ +YL R + RLDGS K + RR + + + F FLLST
Sbjct: 853 HRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDHFNAEGSQDFCFLLST 912
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI +DSDWNP D QA RAHR+GQ QV +YRL+ ++EE++ +
Sbjct: 913 RAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTARSVEEQIVE 972
Query: 1455 RAKQKEHVQQVVME 1468
RAKQK + +V++
Sbjct: 973 RAKQKMVLDHLVIQ 986
>ECU10g1320 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 823
Score = 199 bits (505), Expect = 4e-50
Identities = 113/319 (35%), Positives = 186/319 (57%), Gaps = 24/319 (7%)
Query: 736 IDQPKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIW 795
I P+ + L++YQ++GLNWL N+++ IN ILADEMGLGKT+Q+I+ L ++
Sbjct: 43 ISSPRFVLYELRDYQIEGLNWLINMHENSINCILADEMGLGKTLQTIAFLGYIRYVKKER 102
Query: 796 GPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHV 855
+++ P STL NW E +F+P +K+ ++ + RK +R+ + + + R +
Sbjct: 103 KRHLIILPKSTLANWRREFRKFMPNYKVRVFYSS---RKEMRR--EAEEIMSSR---WDA 154
Query: 856 MVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQN 915
+T+Y+M ++ S L +KW Y+++DEA IK+ S K + F C +RLL+TGTP+QN
Sbjct: 155 CLTTYEMCINARSILNTVKWSYIVIDEAHRIKNEHSLLSKIVRIFSCDHRLLITGTPLQN 214
Query: 916 NMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRR 975
N+ ELWALL+FI+P +F+ ++F ES+ + E + E +RR+ VL+ F LRR
Sbjct: 215 NVHELWALLNFIVPEIFNDAEKF--------ESYVMNIDEGDGEAIRRIRSVLQLFFLRR 266
Query: 976 IKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVN 1035
K +V+ L K +++ L+ Q + Y++L + + + G L+N
Sbjct: 267 EKIDVEMSLPPKKIVNLYSKLSPMQREWYRMLLKRDLSPLGSTRDPKG--------MLMN 318
Query: 1036 LVMEFRKVCNHPDLFERAD 1054
+VM+ RK CNHP LF A+
Sbjct: 319 VVMQLRKCCNHPYLFPDAE 337
Score = 143 bits (360), Expect = 2e-33
Identities = 66/135 (48%), Positives = 100/135 (73%), Gaps = 1/135 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLSTR 1395
RVLI+ QM+ M+D++E+Y +R+Y + R+DGS+ DR + + + + + F+FLL+TR
Sbjct: 370 RVLIFSQMSMMLDILEDYAMFREYEYCRIDGSTSYRDRTEAIDGFNAEGSEKFLFLLTTR 429
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGGLGINL+ ADTVI +DSDWNP +D QA DRAHR+GQ +QV V+RL+ T+EER+ R
Sbjct: 430 AGGLGINLSTADTVILFDSDWNPQMDLQAQDRAHRIGQKKQVVVFRLISENTVEERIVYR 489
Query: 1456 AKQKEHVQQVVMEGK 1470
+ QK + ++++G+
Sbjct: 490 SLQKLKLDDILLQGR 504
>At5g44800 [R] KOG0383 Predicted helicase
Length = 2228
Score = 197 bits (502), Expect = 8e-50
Identities = 132/406 (32%), Positives = 223/406 (54%), Gaps = 37/406 (9%)
Query: 703 LKETQDKARKFDEEDEEDGELNFQ-NPT-SLGEITI--DQPKML-ACTLKEYQLKGLNWL 757
LK + F + +++ E N + NPT GE+ +QP+ L L +QL+ LNWL
Sbjct: 627 LKHSSHLIDLFHQYEQKTLERNSKGNPTRERGEVVTLTEQPQELRGGALFAHQLEALNWL 686
Query: 758 ANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRF 817
+ + N ILADEMGLGKTV + + L+ L + + P +V+ P ST+ NW++E S +
Sbjct: 687 RRCWHKSKNVILADEMGLGKTVSASAFLSSLYFEFGVARPCLVLVPLSTMPNWLSEFSLW 746
Query: 818 VPQFKILPYWGNANDRKTLRKF-WDRKHLRYGRDAP----FHVMVTSYQMVVSDASYLQK 872
P ++ Y G+A R +R + W K+ P F+V++T+Y+MV++D+S+L+
Sbjct: 747 APLLNVVEYHGSAKGRAIIRDYEWHAKNSTGTTKKPTSYKFNVLLTTYEMVLADSSHLRG 806
Query: 873 MKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLF 932
+ W+ +++DE +K+S+S + L +F ++R+LLTGTP+QNN+ E++ LL+F+ PS F
Sbjct: 807 VPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNIGEMYNLLNFLQPSSF 866
Query: 933 DSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDV 992
S F + F D+ S E++ L ++ P MLRR+KK+ + K E V
Sbjct: 867 PSLSSFEERF-HDLTS---------AEKVEELKKLVAPHMLRRLKKDAMQNIPPKTERMV 916
Query: 993 LCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFER 1052
+LT QA+ Y ++ ++ Y + N + Q ++N+VM+ RKVCNHP L
Sbjct: 917 PVELTSIQAEYY---RAMLTKNYQILRNIGKG---VAQQSMLNIVMQLRKVCNHPYLIPG 970
Query: 1053 ADVMSPFSFVSFGESASLSREGDFVEVNYSAKNLINYNLPRLIYDE 1098
+ ES SL D + + SAK + +++ ++++ E
Sbjct: 971 TE----------PESGSLEFLHD-MRIKASAKLTLLHSMLKVLHKE 1005
Score = 133 bits (334), Expect = 2e-30
Identities = 71/147 (48%), Positives = 101/147 (68%), Gaps = 5/147 (3%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLT--YRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLS 1393
HRVLI+ QMTK++D++E+YL + T R+DGS + DR+ + + + F+FLLS
Sbjct: 1007 HRVLIFSQMTKLLDILEDYLNIEFGPKTFERVDGSVAVADRQAAIARFNQDKNRFVFLLS 1066
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRA GLGINL ADTVI YDSD+NP D QAM+RAHR+GQ++++ VYRL++R ++EER+
Sbjct: 1067 TRACGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSKRLLVYRLVVRASVEERIL 1126
Query: 1454 DRAKQKEHVQQVVMEGKAKENKQKIIE 1480
AK+K + Q+ + K QK E
Sbjct: 1127 QLAKKKLMLDQLFVN---KSGSQKEFE 1150
>CE18196 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2957
Score = 197 bits (500), Expect = 1e-49
Identities = 137/421 (32%), Positives = 217/421 (51%), Gaps = 52/421 (12%)
Query: 745 TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPA 804
+L+EYQ +G++WL Y N ILADEMGLGKTVQ+I+ L+ + D Y I GPF+VV P
Sbjct: 1186 SLREYQFEGVDWLLYCYYNAQNCILADEMGLGKTVQTITFLSRIYD-YGIHGPFLVVVPL 1244
Query: 805 STLHNWVNEISRFVPQFKILPYWGNANDRKTLRK---FWDRKHL---RYGRD-APFHVMV 857
ST+ NWV E + I+ Y G+A R+ L++ F+D++H + ++ ++
Sbjct: 1245 STIQNWVREFETWTDMNAIV-YHGSAYAREVLQQYEVFYDKRHCGAKNWKKNFVKIDALI 1303
Query: 858 TSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRW-KTLLSFHCRNRLLLTGTPIQNN 916
T+++ VVSD +L+K+ W+ ++DEA +K+ LL+F +R+LLTGTP+QNN
Sbjct: 1304 TTFETVVSDVEFLKKIPWRVCVIDEAHRLKNRNCKLLVNGLLAFRMEHRVLLTGTPLQNN 1363
Query: 917 MQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRI 976
+ EL++LL+F+ P FD+ F +E T+ +Q+++L +LKP MLRR+
Sbjct: 1364 IDELFSLLNFLHPQQFDNSATF-------LEQFGSCQTD---DQVQKLQEILKPMMLRRL 1413
Query: 977 KKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNL 1036
K++V+ LG K E + L+ Q K Y+ + + N + TS L+N+
Sbjct: 1414 KEDVEKSLGPKEETIIEVQLSDMQKKFYRAILER---------NFSHLCKGTSAPSLMNV 1464
Query: 1037 VMEFRKVCNHPDLFERAD--VMSPFSFV-------SFGESASLSREGDFVEVNYSAKNLI 1087
+ME RK CNHP L A+ +M+ F + A + G V + L
Sbjct: 1465 MMELRKCCNHPFLINGAEEAIMNDFRLAHPDWDEETLAHKALIQASGKVVLIEKLLPKLR 1524
Query: 1088 NYNLPRLIYDELV--------------VPNYNNDVDVRAKLLYHTMNIFHPANSFQLCFI 1133
LI+ ++V P D +VR L ++ F NS + F+
Sbjct: 1525 KDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFL 1584
Query: 1134 L 1134
L
Sbjct: 1585 L 1585
Score = 127 bits (318), Expect = 2e-28
Identities = 66/134 (49%), Positives = 89/134 (66%), Gaps = 1/134 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
H+VLI+ QM K++DL+EE+L Y R+DG+ + D R+ + + + D F+FLL T
Sbjct: 1528 HKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGDLRQAAIDRFSKENSDRFVFLLCT 1587
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINLTAADTVI +DSDWNP D QA R HR+GQ + V VYRL+ T E M D
Sbjct: 1588 RAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQKKLVKVYRLITSNTYEREMFD 1647
Query: 1455 RAKQKEHVQQVVME 1468
+A K + + V++
Sbjct: 1648 KASLKLGLDKAVLQ 1661
>7297570 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 844
Score = 193 bits (491), Expect = 2e-48
Identities = 129/407 (31%), Positives = 221/407 (53%), Gaps = 34/407 (8%)
Query: 661 NKNKVVDL--TKTAASKTNVESID---FATEDDEKLRLMAAQNASNALKETQDKARKFDE 715
N+ +++L KT + K + ID F+ D + +L + + + + L Q+ K +
Sbjct: 192 NEASLIELQSVKTLSEKKALAIIDVRPFSDWSDLRQKLESIRMSGDLLNYAQELINKQNT 251
Query: 716 EDEEDGELN-----FQNPTSLGEITIDQPKMLACTLK--EYQLKGLNWLANLYDQGINGI 768
+ N + S G ++QPK+L+ L+ +YQ+ GLNWL ++ Q +NGI
Sbjct: 252 VAAILSKCNNMVSRLEKAISNGAGIVEQPKLLSSGLQLADYQIIGLNWLTVMHKQEMNGI 311
Query: 769 LADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWG 828
LADEMGLGKT+Q I+ LA+L + ++V P+STL NW EISR+ P+ + Y G
Sbjct: 312 LADEMGLGKTIQVIAFLAYLKENGLSQAAHLIVVPSSTLDNWEAEISRWCPELVVEKYHG 371
Query: 829 NANDRKTLRKFWDRKHLRYGRD--APFHVMVTSYQMVVS---DASYLQKMKWQYMILDEA 883
+ ++R+ +R R+ +D F V++T+Y +V S + + K Y+I DEA
Sbjct: 372 SQDERRRMRG-------RFAKDGFTGFDVLLTTYHIVGSTPEERKMFRVCKLDYVIFDEA 424
Query: 884 QAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLF-DSHDEFSDWF 942
+K+ + R+ L++ + R R+LLTGTP+QNN+ EL +LL F+MP F S ++ F
Sbjct: 425 HMLKNMTTQRYANLITINARMRILLTGTPLQNNLLELISLLCFVMPKFFAKSIEDIKSLF 484
Query: 943 SKDIESHAESN--TELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQ 1000
+K +S + + ++ + Q++R ++KPF+LRR+KK+V L K+ + ++ +Q
Sbjct: 485 AKKGKSDGDQDEVSQFQETQIQRAKRIMKPFVLRRLKKDVLKNLPKKLSLVEKVPMSSQQ 544
Query: 1001 AKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP 1047
Y L D N G +S++ + ++ME R++ NHP
Sbjct: 545 KIYYHEL-------VDYYSNNKGEVCSSSERAGIAIMMEMRRIANHP 584
Score = 137 bits (344), Expect = 2e-31
Identities = 67/145 (46%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
HRVL++ Q T M+D++EEYL R++ RLDG++ ++ R+DL+ D+ IF+FLLST+
Sbjct: 669 HRVLLFSQFTMMLDIVEEYLRIRKFGFCRLDGATAVNVRQDLITDFNGDDSIFVFLLSTK 728
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG+GINLTAADT + +D D+NP D QA DR HR+GQ R VT+YRL+ TIEE +
Sbjct: 729 AGGVGINLTAADTCVIHDIDFNPYNDKQAEDRCHRMGQQRPVTIYRLISESTIEEGILMA 788
Query: 1456 AKQKEHVQQ-VVMEGKAKENKQKII 1479
A++K +++ + K + ++Q+ +
Sbjct: 789 AEEKLKLEKDITSNEKGEVHEQRCV 813
>YAL019w [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1131
Score = 192 bits (488), Expect = 3e-48
Identities = 133/388 (34%), Positives = 194/388 (49%), Gaps = 38/388 (9%)
Query: 677 NVESIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITI 736
+VE D +DD+ +A + ++ + T RK + +
Sbjct: 518 DVEYDDGDDDDDDDDEFVATRKNTHVISTTSRNGRK-----------------PIVKFFK 560
Query: 737 DQPKMLA--CTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNI 794
+P++L+ +LK+YQ G+NWL LY ++ ILAD+MGLGKT Q IS A+L + N
Sbjct: 561 GKPRLLSPEISLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLK-QINE 619
Query: 795 WGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFH 854
GP +VV P+STL NW+ E +F P KI PY+G+ +R+ LR +R +Y
Sbjct: 620 PGPHLVVVPSSTLENWLREFQKFAPALKIEPYYGSLQEREELRDILERNAGKYD------ 673
Query: 855 VMVTSYQMVVS---DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGT 911
V+VT+Y + D S+L+ + ++ DE +K+S S R+ L+ RLLLTGT
Sbjct: 674 VIVTTYNLAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGT 733
Query: 912 PIQNNMQELWALLHFIMPSLFDSHDEFSDWF----SKDIESHAESNTELNQEQLRRLHMV 967
P+QNN++EL +LL FIMP+LF S E D +K + + N L QE + R +
Sbjct: 734 PLQNNLKELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTM 793
Query: 968 LKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDV 1027
+KPF+LRR K V L K C+L Q K+Y V I++ D
Sbjct: 794 MKPFILRRRKDQVLKHLPPKHTHIQYCELNAIQKKIYDKEIQIVLEHKRMIKDGELPKDA 853
Query: 1028 TSDQKL-----VNLVMEFRKVCNHPDLF 1050
KL NL+M RK HP LF
Sbjct: 854 KEKSKLQSSSSKNLIMALRKASLHPLLF 881
Score = 116 bits (291), Expect = 2e-25
Identities = 57/138 (41%), Positives = 91/138 (65%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+VLI+ T+++D++E L+ Y +RLDGS++++DR+ L+ + DI IF+LST+A
Sbjct: 968 KVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKA 1027
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GG GINL A+ VI +D +NP D QA DRAHR+GQT++V + L+ + +IEE++ A
Sbjct: 1028 GGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLA 1087
Query: 1457 KQKEHVQQVVMEGKAKEN 1474
K K + + E K ++
Sbjct: 1088 KNKLALDSYISEDKKSQD 1105
>Hs15805014 [R] KOG0391 SNF2 family DNA-dependent ATPase
Length = 3124
Score = 192 bits (488), Expect = 3e-48
Identities = 103/318 (32%), Positives = 173/318 (54%), Gaps = 21/318 (6%)
Query: 734 ITIDQPKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYN 793
+ + P +L L++YQ GL+WLA LY + +NGILADE GLGKTVQ I+ AHLA
Sbjct: 1043 VKFNAPSLLYGALRDYQKIGLDWLAKLYRKNLNGILADEAGLGKTVQIIAFFAHLACNEG 1102
Query: 794 IWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPF 853
WGP +VV + + W E+ R+ P KIL Y G+ + K R+ W + F
Sbjct: 1103 NWGPHLVVVRSCNILKWELELKRWCPGLKILSYIGSHRELKAKRQEWAEPN-------SF 1155
Query: 854 HVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPI 913
HV +TSY + +++W+ +++DE Q +K W+ + + + RLLL +P+
Sbjct: 1156 HVCITSYTQFFRGLTAFTRVRWKCLVIDEMQRVKGMTERHWEAVFTLQSQQRLLLIDSPL 1215
Query: 914 QNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFML 973
N ELW ++HF++P + + S + + +E + + + + RLH V +PF+L
Sbjct: 1216 HNTFLELWTMVHFLVPGI------SRPYLSSPLRAPSEESQDYYHKVVIRLHRVTQPFIL 1269
Query: 974 RRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKL 1033
RR K++V+ +L K E + C L+ RQ LY+ + Q G +A+++ +
Sbjct: 1270 RRTKRDVEKQLTKKYEHVLKCRLSNRQKALYEDVILQ-PGTQEALKSG-------HFVNV 1321
Query: 1034 VNLVMEFRKVCNHPDLFE 1051
+++++ +++CNHP L E
Sbjct: 1322 LSILVRLQRICNHPGLVE 1339
Score = 98.2 bits (243), Expect = 9e-20
Identities = 47/133 (35%), Positives = 84/133 (62%), Gaps = 1/133 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
RVLI QM M+D++E +L + T++R+D ++ + R++L+ + IF +LST +
Sbjct: 1880 RVLILSQMILMLDILEMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHS 1939
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GINL ADTV+FYD+D NP +D++A + R+G+ + + +YRL+ +IEE++
Sbjct: 1940 RTTGINLVEADTVVFYDNDLNPVMDAKAQEWCDRIGRCKDIHIYRLVSGNSIEEKLLKNG 1999
Query: 1457 KQKEHVQQVVMEG 1469
K+ +++V +G
Sbjct: 2000 -TKDLIREVAAQG 2011
>7293795 [R] KOG0383 Predicted helicase
Length = 883
Score = 190 bits (483), Expect = 1e-47
Identities = 122/346 (35%), Positives = 187/346 (53%), Gaps = 27/346 (7%)
Query: 737 DQPKML---ACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYN 793
DQP L L +Q++G++WL + QGI ILADEMGLGKT+Q++ L L +
Sbjct: 255 DQPVFLKEAGLKLHPFQIEGVSWLRYSWGQGIPTILADEMGLGKTIQTVVFLYSLFKEGH 314
Query: 794 IWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKF------WDRKHLRY 847
GPF++ P STL NW E+ + P+ + Y G R +RK K +R
Sbjct: 315 CRGPFLISVPLSTLTNWERELELWAPELYCVTYVGGKTARAVIRKHEISFEEVTTKTMRE 374
Query: 848 GR-DAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRL 906
+ F+VM+TSY+ + DA++L + W +++DEA ++S+QS ++ L + +L
Sbjct: 375 NQTQYKFNVMLTSYEFISVDAAFLGCIDWAALVVDEAHRLRSNQSKFFRILSKYRIGYKL 434
Query: 907 LLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHM 966
LLTGTP+QNN++EL+ LL+F+ F+ F AE +EQ++RLH
Sbjct: 435 LLTGTPLQNNLEELFHLLNFLSSGKFNDLQTF----------QAEFTDVSKEEQVKRLHE 484
Query: 967 VLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDD 1026
+L+P MLRR+K +V + K E V +L+ Q K Y K ++ + A+ N G
Sbjct: 485 ILEPHMLRRLKADVLKSMPPKSEFIVRVELSSMQKKFY---KHILTKNFKAL-NQKGGGR 540
Query: 1027 VTSDQKLVNLVMEFRKVCNHPDLFERADVMSPFSFVSFGESASLSR 1072
V S L+N++M+ RK CNHP LF A + S E +SL++
Sbjct: 541 VCS---LLNIMMDLRKCCNHPYLFPSAAEEATISPSGLYEMSSLTK 583
Score = 126 bits (317), Expect = 2e-28
Identities = 64/133 (48%), Positives = 90/133 (67%), Gaps = 1/133 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVL++ QMTKM++++E +L Y + R+DGS K D R+ + + + F+FLLST
Sbjct: 603 HRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAIDRFNDPVSEHFVFLLST 662
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGGLGINL ADTVI +DSDWNP D QA RAHR+GQ ++V +YR + ++EER+
Sbjct: 663 RAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKVMIYRFVTHNSVEERIMQ 722
Query: 1455 RAKQKEHVQQVVM 1467
AK K + +V+
Sbjct: 723 VAKHKMMLTHLVV 735
>Hs22047966 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1953
Score = 190 bits (482), Expect = 2e-47
Identities = 115/315 (36%), Positives = 183/315 (57%), Gaps = 26/315 (8%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYN--IWGPFIVVTP 803
L+EYQL+G+NWL + N ILADEMGLGKT+QSI A L + YN I GPF+V+ P
Sbjct: 183 LREYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSI---AFLQEVYNVGIHGPFLVIAP 239
Query: 804 ASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAP----FHVMVTS 859
ST+ NW E + + + + Y G+ R+ ++++ GR P F ++T+
Sbjct: 240 LSTITNWEREFNTWT-EMNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITT 298
Query: 860 YQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQE 919
++M++SD L++++W+ +I+DEA +K+ +L +++LLTGTP+QN ++E
Sbjct: 299 FEMILSDCPELREIEWRCVIIDEAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEE 358
Query: 920 LWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKN 979
L++LLHF+ PS F S EF ++ + TE EQ+++L +LKP MLRR+K++
Sbjct: 359 LFSLLHFLEPSQFPSESEF-------LKDFGDLKTE---EQVQKLQAILKPMMLRRLKED 408
Query: 980 VQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVME 1039
V+ L K E + +LT Q K Y+ + + + + AG+ T+ L+N +ME
Sbjct: 409 VEKNLAPKQETIIEVELTNIQKKYYRAI---LEKNFSFLSKGAGH---TNMPNLLNTMME 462
Query: 1040 FRKVCNHPDLFERAD 1054
RK CNHP L A+
Sbjct: 463 LRKCCNHPYLINGAE 477
Score = 127 bits (320), Expect = 1e-28
Identities = 66/135 (48%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI--FIFLLS 1393
H+VLI+ QM + +D++E+YL R+Y + R+DG + + R+ + D +KPD F+FLL
Sbjct: 522 HKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI-DRFSKPDSDRFVFLLC 580
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLGINLTAADT I +DSDWNP D QA R HR+GQ++ V VYRL+ R + E M
Sbjct: 581 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 640
Query: 1454 DRAKQKEHVQQVVME 1468
D+A K + + V++
Sbjct: 641 DKASLKLGLDKAVLQ 655
>SPAC20G8.08c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 944
Score = 187 bits (476), Expect = 8e-47
Identities = 129/367 (35%), Positives = 196/367 (53%), Gaps = 47/367 (12%)
Query: 729 TSLGEITID----QPKMLAC--TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSI 782
TS G I+ + QP +A TLK YQ+ GLNWL +Y ++GILADEMGLGKT Q I
Sbjct: 391 TSTGSISYEYNSQQPSSIASGITLKSYQIVGLNWLCLMYKAKLSGILADEMGLGKTCQVI 450
Query: 783 SVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDR 842
S LA L ++ I +VV P+STL NW+ E +F P ++ Y G ++R R
Sbjct: 451 SFLASLKEK-GIQNRHLVVVPSSTLGNWLREFEKFCPSLRVESYSGTQSERINKRY---- 505
Query: 843 KHLRYGRDAPFHVMVTSYQMVVS---DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLS 899
Y D F V+VT+YQ+ D S+L+K ++ I DE +K+ S R+K L++
Sbjct: 506 ----YLMDTDFDVLVTTYQLASGSRDDRSFLRKQRFDISIFDEGHYLKNRMSERYKHLMN 561
Query: 900 FHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTE---L 956
RLL+TGTP+QNN++EL +LL F++P +FD++ + D K I++ ++ + E L
Sbjct: 562 IPANFRLLITGTPLQNNLKELISLLAFMLPKVFDNNMQGLDIIYK-IKTTSDGDIERAYL 620
Query: 957 NQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLY---QVLKSQVSG 1013
+QE++ R ++ PF+LRR K+NV S+L KI+ C + Q LY LK+ V+
Sbjct: 621 SQERISRAKTIMNPFILRRRKENVLSDLPPKIQHVEYCHMEETQLSLYLSVLELKNLVNA 680
Query: 1014 GYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERADVMSPFSFVSFGESASLSRE 1073
+ N++M+ RK H LF + S + S + RE
Sbjct: 681 NRE------------------NILMQLRKAALHQLLFRSQYNLETLSLM----SKRILRE 718
Query: 1074 GDFVEVN 1080
+++ N
Sbjct: 719 DAYLDAN 725
Score = 120 bits (301), Expect = 2e-26
Identities = 61/140 (43%), Positives = 90/140 (63%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
R+LI+ Q T+++D++E L +RLDGS+ ++ R+ L+ D+ T + +FLLST++
Sbjct: 782 RILIFSQFTQVLDILEYVLNTLDLEFLRLDGSTPVETRQQLIDDFHTNENYKVFLLSTKS 841
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GG GINLT A+ VI +D +NP D QA DRAHR+GQTR V VYRL+ + TIEE +R A
Sbjct: 842 GGFGINLTCANIVILFDCSFNPFDDMQAEDRAHRVGQTRPVHVYRLITKNTIEENIRRLA 901
Query: 1457 KQKEHVQQVVMEGKAKENKQ 1476
K ++ + K K+
Sbjct: 902 NTKLTLESSLTTDSEKIQKE 921
>Hs22047300 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1970
Score = 185 bits (469), Expect = 5e-46
Identities = 109/313 (34%), Positives = 179/313 (56%), Gaps = 22/313 (7%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L+EYQL+G+NWL + N ILADEMGLGKT+QSI+ L + + I GPF+V+ P S
Sbjct: 399 LREYQLEGVNWLLFNWYNMRNCILADEMGLGKTIQSITFLYEIYLK-GIHGPFLVIAPLS 457
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRK----FWDRKHLRYGRDAPFHVMVTSYQ 861
T+ NW E + + ++ Y G+ R+T++ F D + FH ++T+++
Sbjct: 458 TIPNWEREFRTWT-ELNVVVYHGSQASRRTIQLYEMYFKDPQGRVIKGSYKFHAIITTFE 516
Query: 862 MVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELW 921
M+++D L+ + W+ +++DEA +K+ + L +++LLTGTP+QN ++EL+
Sbjct: 517 MILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKVLLTGTPLQNTVEELF 576
Query: 922 ALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQ 981
+LLHF+ PS F S F F D+++ +EQ+++L +LKP MLRR+K++V+
Sbjct: 577 SLLHFLEPSRFPSETTFMQEFG-DLKT---------EEQVQKLQAILKPMMLRRLKEDVE 626
Query: 982 SELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFR 1041
L K E + +LT Q K Y+ + + + + G +V + L+N +ME R
Sbjct: 627 KNLAPKEETIIEVELTNIQKKYYRAI---LEKNFTFLSKGGGQANVPN---LLNTMMELR 680
Query: 1042 KVCNHPDLFERAD 1054
K CNHP L A+
Sbjct: 681 KCCNHPYLINGAE 693
Score = 129 bits (324), Expect = 4e-29
Identities = 68/142 (47%), Positives = 96/142 (66%), Gaps = 4/142 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI--FIFLLS 1393
HRVLI+ QM + +D++E+YL R+Y + R+DG + + R+ + D +KPD F+FLL
Sbjct: 738 HRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAI-DRFSKPDSDRFVFLLC 796
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLGINLTAADT I +DSDWNP D QA R HR+GQ++ V +YRL+ R + E M
Sbjct: 797 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMF 856
Query: 1454 DRAKQKEHVQQVVMEG-KAKEN 1474
D+A K + + V++ +EN
Sbjct: 857 DKASLKLGLDKAVLQSMSGREN 878
>Hs21362042 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2713
Score = 184 bits (466), Expect = 1e-45
Identities = 112/318 (35%), Positives = 182/318 (57%), Gaps = 32/318 (10%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L+EYQL+G+NWL + N ILADEMGLGKT+QSI+ L+ + R I GPF+++ P S
Sbjct: 459 LREYQLEGMNWLLFNWYNRKNCILADEMGLGKTIQSITFLSEIFLR-GIHGPFLIIAPLS 517
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAP---------FHVM 856
T+ NW E + + + Y G+ R+ ++++ + Y RDA FHV+
Sbjct: 518 TITNWEREFRTWT-EMNAIVYHGSQISRQMIQQY----EMVY-RDAQGNPLSGVFKFHVV 571
Query: 857 VTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNN 916
+T+++M+++D L+K+ W +I+DEA +K+ + L +++LLTGTP+QN+
Sbjct: 572 ITTFEMILADCPELKKIHWSCVIIDEAHRLKNRNCKLLEGLKLMALEHKVLLTGTPLQNS 631
Query: 917 MQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRI 976
++EL++LL+F+ PS F S F +E + TE EQ+++L +LKP MLRR+
Sbjct: 632 VEELFSLLNFLEPSQFPSETAF-------LEEFGDLKTE---EQVKKLQSILKPMMLRRL 681
Query: 977 KKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNL 1036
K +V+ L K E + +LT Q K Y+ + + + + A ++ + L+N
Sbjct: 682 KDDVEKNLAPKQETIIEVELTNIQKKYYRAI---LEKNFSFLTKGANQHNMPN---LINT 735
Query: 1037 VMEFRKVCNHPDLFERAD 1054
+ME RK CNHP L A+
Sbjct: 736 MMELRKCCNHPYLINGAE 753
Score = 129 bits (324), Expect = 4e-29
Identities = 67/135 (49%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI--FIFLLS 1393
H+VLI+ QM + +D++E+YL R+YT+ R+DG + + R+ + D KPD F+FLL
Sbjct: 798 HKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI-DRFCKPDSDRFVFLLC 856
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLGINLTAADT I +DSDWNP D QA R HR+GQ++ V VYRL+ R + E M
Sbjct: 857 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 916
Query: 1454 DRAKQKEHVQQVVME 1468
D+A K + + V++
Sbjct: 917 DKASLKLGLDKAVLQ 931
>YPL082c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1867
Score = 183 bits (465), Expect = 2e-45
Identities = 119/339 (35%), Positives = 178/339 (52%), Gaps = 39/339 (11%)
Query: 739 PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRY------ 792
P + TL++YQ G+NWLA L ++GIL D+MGLGKT+Q+I ++A +D+Y
Sbjct: 1265 PIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIA--SDQYLRKEDY 1322
Query: 793 -------NIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHL 845
+ P +++ P S +W NE ++ P K++ Y G R TLR
Sbjct: 1323 EKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTLRP------- 1375
Query: 846 RYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNR 905
+ + ++VTSY + +D + L K ++ Y +LDE IK+SQS K + +R
Sbjct: 1376 ---QLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHR 1432
Query: 906 LLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ----- 960
L+LTGTPIQNN+ ELW+L F+MP + F + F+K I + S T +++
Sbjct: 1433 LILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLA 1492
Query: 961 LRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLY-QVLKSQVSGGYDAIE 1019
L LH + PFMLRR+K++V S+L KI D C+L Q +LY K Q + IE
Sbjct: 1493 LEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIE 1552
Query: 1020 NAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERADVMSP 1058
N+ D Q + + RK+CNHP L V+SP
Sbjct: 1553 NSEIAD---GKQHIFQALQYMRKLCNHPAL-----VLSP 1583
Score = 123 bits (308), Expect = 3e-27
Identities = 63/136 (46%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQY----THIRLDGSSKLDDRRDLVHDWQTKPDIFIFL 1391
HR LI+ Q+ M+D++E L +++Y T++RLDGS DR+ +V + P I L
Sbjct: 1647 HRALIFCQLKDMLDMVENDL-FKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLL 1705
Query: 1392 LSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEER 1451
L+T+ GGLG+NLT ADTVIF + DWNP D QAMDRAHR+GQ + V VYR++ +GT+EE+
Sbjct: 1706 LTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEK 1765
Query: 1452 MRDRAKQKEHVQQVVM 1467
+ K K ++ V+
Sbjct: 1766 IMGLQKFKMNIASTVV 1781
>SPBC1826.01c [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 635
Score = 181 bits (458), Expect = 1e-44
Identities = 116/370 (31%), Positives = 191/370 (51%), Gaps = 45/370 (12%)
Query: 703 LKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLANLYD 762
L ++++K RKF E+ NP+ + +I P ++ L++YQ +G+NWLA L
Sbjct: 7 LLDSREKERKFLEQ--------MLNPSKVEAFSIPVP--ISADLRKYQQEGVNWLAFLNK 56
Query: 763 QGINGILADEMGLGKTVQSISVLAHLADRYN-------------IWGPFIVVTPASTLHN 809
++GIL D+MGLGKT+Q+I ++A +D YN P ++V P++ +
Sbjct: 57 YELHGILCDDMGLGKTLQTICIVA--SDHYNRQKLFEESGSPKFAHVPSLIVCPSTLAGH 114
Query: 810 WVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASY 869
W E+S + P K+ Y G +R +R + V+VTSY + +D
Sbjct: 115 WQQELSTYAPFLKVSAYVGPPAERAKIRSKMKKSD----------VVVTSYDICRNDVDE 164
Query: 870 LQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMP 929
L K+ W Y +LDE IK++++ K + S +RL+L+GTPIQNN+ ELW+L F+MP
Sbjct: 165 LVKIDWNYCVLDEGHVIKNARAKLTKAVKSLRSYHRLILSGTPIQNNVLELWSLFDFLMP 224
Query: 930 SLFDSHDEFSDWFSKDIESHAESNTELNQEQ-----LRRLHMVLKPFMLRRIKKNVQSEL 984
+ F + F + I + ++ + + + L +H + PFMLRR+K++V ++L
Sbjct: 225 GFLGTEKTFQERFVRPIAASRDAKSSSKERERGTLALEAIHKQVLPFMLRRLKEDVLADL 284
Query: 985 GDKIEIDVLCDLTFRQAKLYQVLKSQVSGGY----DAIENAAGNDDVTSDQKLVNLVMEF 1040
KI D CD++ Q KL SQ++ D E G S + + +++
Sbjct: 285 PPKIIQDYYCDMSDLQRKLLNDFVSQLNINEELEDDETEKTQGTRKKKSQKAHIFQALQY 344
Query: 1041 -RKVCNHPDL 1049
RK+CNHP L
Sbjct: 345 MRKLCNHPAL 354
Score = 125 bits (313), Expect = 7e-28
Identities = 70/175 (40%), Positives = 100/175 (57%), Gaps = 21/175 (12%)
Query: 1336 HRVLIYFQMTKMMDLMEEYL---TYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLL 1392
HRVLI+ Q+ M+D++E+ L T T++RLDGS + R++ V + P I + LL
Sbjct: 419 HRVLIFCQLKDMLDMVEKDLLQATMPDVTYMRLDGSVEPTKRQEAVTKFNNDPSIDVLLL 478
Query: 1393 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERM 1452
+T GGLG+NLT ADTVIF + DWNP D QAMDRAHR+GQ + V VYRL+ RG +EE++
Sbjct: 479 TTHVGGLGLNLTGADTVIFVEHDWNPMRDLQAMDRAHRIGQKKVVNVYRLITRGCLEEKI 538
Query: 1453 RDRAKQKEHVQQVVME------------------GKAKENKQKIIEVEKEHSESA 1489
+ K +V V+ + +Q + ++KE SE A
Sbjct: 539 MGLQRFKMNVASTVVNQQNAGLSSIGTDQILDLFNTTADEQQTVQNIDKEESEDA 593
>SPAC25A8.01c [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 922
Score = 177 bits (448), Expect = 1e-43
Identities = 111/317 (35%), Positives = 181/317 (57%), Gaps = 20/317 (6%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L++YQ+ G+NWL LY+ + GILADEMGLGKT Q+I+ + L D+ NI GP +V+ PAS
Sbjct: 387 LQDYQIIGINWLYLLYELKLAGILADEMGLGKTCQTIAFFSLLMDK-NINGPHLVIAPAS 445
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS 865
T+ NW+ E ++F P+ KI Y+G+ +R+ +R+ + +D+ ++VM+T+Y++ +
Sbjct: 446 TMENWLREFAKFCPKLKIELYYGSQVEREEIRE-----RINSNKDS-YNVMLTTYRLAAT 499
Query: 866 ---DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWA 922
D +L+ K+ + DE +K+ S R++ L+S R+LLTGTP+QNN++EL +
Sbjct: 500 SKADRLFLRNQKFNVCVYDEGHYLKNRASERYRHLMSIPADFRVLLTGTPLQNNLKELIS 559
Query: 923 LLHFIMPSLFDSHDEFSD---WFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKN 979
LL FI+P +FD + D K ES E L+++++ R M++ PF+LRR K
Sbjct: 560 LLAFILPHVFDYGLKSLDVIFTMKKSPESDFE-RALLSEQRVSRAKMMMAPFVLRRKKSQ 618
Query: 980 VQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAA-----GNDDVTSDQKLV 1034
V L K I C+ + + + Y S+ S EN N ++ +
Sbjct: 619 VLDALPKKTRIIEFCEFSEEERRRYDDFASKQSVNSLLDENVMKTNLDTNANLAKKKSTA 678
Query: 1035 NLVM-EFRKVCNHPDLF 1050
V+ + RK+ +HP LF
Sbjct: 679 GFVLVQLRKLADHPMLF 695
Score = 111 bits (277), Expect = 1e-23
Identities = 53/123 (43%), Positives = 83/123 (67%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
RV+++ Q T+++D+++ + +R DGS+++D R+DL+ + I +FLLST+A
Sbjct: 779 RVVLFSQFTQVLDILQLVMKSLNLKFLRFDGSTQVDFRQDLIDQFYADESINVFLLSTKA 838
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GG GINL A+ VI YD +NP D QA DRAHR+GQ ++VTVY+ +++ TIEE ++ A
Sbjct: 839 GGFGINLACANMVILYDVSFNPFDDLQAEDRAHRVGQKKEVTVYKFVVKDTIEEHIQRLA 898
Query: 1457 KQK 1459
K
Sbjct: 899 NAK 901
>At2g02090 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 763
Score = 174 bits (442), Expect = 7e-43
Identities = 112/326 (34%), Positives = 174/326 (53%), Gaps = 35/326 (10%)
Query: 746 LKEYQLKGLNWLANLYDQGING-ILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPA 804
LK YQL G+N+L LY +GI G ILADEMGLGKT+Q+I+ L L+ N GP +VV PA
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNNDPGPHLVVCPA 272
Query: 805 STLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRK---HLRYGRDAPFHVMVTSYQ 861
S L NW E+ ++ P F +L Y G A R + R+ + G+ PF+V++ Y
Sbjct: 273 SVLENWERELRKWCPSFTVLQYHGAA------RAAYSRELNSLSKAGKPPPFNVLLVCYS 326
Query: 862 MV-------VSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSF--HCRNRLLLTGTP 912
+ D L++ +W +++DEA A+K S RWK L+S + RL+LTGTP
Sbjct: 327 LFERHSEQQKDDRKVLKRWRWSCVLMDEAHALKDKNSYRWKNLMSVARNANQRLMLTGTP 386
Query: 913 IQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFM 972
+QN++ ELW+LL F++P +F +++++ N E + E + R+ +L PF+
Sbjct: 387 LQNDLHELWSLLEFMLPDIFT---------TENVDLKKLLNAE-DTELITRMKSILGPFI 436
Query: 973 LRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTS--- 1029
LRR+K +V +L KI+ + +Q Y+ + A + + S
Sbjct: 437 LRRLKSDVMQQLVPKIQRVEYVLMERKQEDAYKEAIEEYRAASQARLVKLSSKSLNSLAK 496
Query: 1030 ---DQKLVNLVMEFRKVCNHPDLFER 1052
+++ N +FRK+ NHP L R
Sbjct: 497 ALPKRQISNYFTQFRKIANHPLLIRR 522
Score = 130 bits (326), Expect = 2e-29
Identities = 65/133 (48%), Positives = 92/133 (68%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
HRVLI+ Q T M+D++E L T+ RLDGS+++ DR+ +V + IF LLSTR
Sbjct: 605 HRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVDTFNNDKSIFACLLSTR 664
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG G+NLT ADTVI +D D+NP ID QA DR HR+GQT+ VT++RL+ + T++E + +
Sbjct: 665 AGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTIFRLVTKSTVDENIYEI 724
Query: 1456 AKQKEHVQQVVME 1468
AK+K + V+E
Sbjct: 725 AKRKLVLDAAVLE 737
>At3g54280 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 2049
Score = 169 bits (427), Expect = 4e-41
Identities = 110/340 (32%), Positives = 179/340 (52%), Gaps = 34/340 (10%)
Query: 742 LACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLA-------DRYNI 794
L L+ YQ +G+NWL L ++GIL D+MGLGKT+Q+ +++A A D ++
Sbjct: 1440 LKVQLRRYQQEGINWLGFLKRFKLHGILCDDMGLGKTLQASAIVASDAAERRGSTDELDV 1499
Query: 795 WGPFIVVTPASTLHNWVNEISRFVPQ--FKILPYWGNANDRKTLRKFWDRKHLRYGRDAP 852
+ P I+V P++ + +W EI +++ +L Y G+A DR +LR+ ++ +
Sbjct: 1500 F-PSIIVCPSTLVGHWAFEIEKYIDLSLLSVLQYVGSAQDRVSLREQFNNHN-------- 1550
Query: 853 FHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTP 912
V++TSY +V D YL + W Y ILDE IK+++S + ++RL+L+GTP
Sbjct: 1551 --VIITSYDVVRKDVDYLTQFSWNYCILDEGHIIKNAKSKITAAVKQLKAQHRLILSGTP 1608
Query: 913 IQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAE-----SNTELNQEQLRRLHMV 967
IQNN+ ELW+L F+MP + +F + K + + + + E + LH
Sbjct: 1609 IQNNIMELWSLFDFLMPGFLGTERQFQASYGKPLLAARDPKCSAKDAEAGVLAMEALHKQ 1668
Query: 968 LKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVL-----KSQVSGGYDAIENA- 1021
+ PF+LRR K+ V S+L +KI D CDL+ Q KLY+ K ++S +A
Sbjct: 1669 VMPFLLRRTKEEVLSDLPEKIIQDRYCDLSPVQLKLYEQFSGSSAKQEISSIIKVDGSAD 1728
Query: 1022 AGNDDVTSDQKLVNLVMEFR---KVCNHPDLFERADVMSP 1058
+GN DV + ++ + K+C+HP L V P
Sbjct: 1729 SGNADVAPTKASTHVFQALQYLLKLCSHPLLVLGDKVTEP 1768
Score = 114 bits (285), Expect = 1e-24
Identities = 63/149 (42%), Positives = 92/149 (61%), Gaps = 14/149 (9%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTY---RQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLL 1392
HRVLI+ Q ++D++E+ L + T++RLDGS + R ++V + + P I + LL
Sbjct: 1824 HRVLIFAQHKALLDIIEKDLFQAHMKSVTYMRLDGSVVPEKRFEIVKAFNSDPTIDVLLL 1883
Query: 1393 STRAGGLGINLTAADTVIFYDSDWNPTIDS-----------QAMDRAHRLGQTRQVTVYR 1441
+T GGLG+NLT+ADT++F + DWNP D QAMDRAHRLGQ R V V+R
Sbjct: 1884 TTHVGGLGLNLTSADTLVFMEHDWNPMRDHQFANIELNKLWQAMDRAHRLGQKRVVNVHR 1943
Query: 1442 LLIRGTIEERMRDRAKQKEHVQQVVMEGK 1470
L++RGT+EE++ K K V V+ +
Sbjct: 1944 LIMRGTLEEKVMSLQKFKVSVANTVINAE 1972
>7300091 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1861
Score = 168 bits (425), Expect = 7e-41
Identities = 116/381 (30%), Positives = 194/381 (50%), Gaps = 35/381 (9%)
Query: 691 LRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQ 750
++LM + LK +ARK D E + F NP S+ + P ++ L+ YQ
Sbjct: 1238 VQLMPLDGKTEQLKSDPLQARK--TRDREFLDYLF-NPKSIPNYKVPVP--ISVELRCYQ 1292
Query: 751 LKGLNWLANLYDQGINGILADEMGLGKTVQSISVLA------HLADRYNIWGPFIVVTPA 804
G+NWL L ++GIL D+MGLGKT+Q+I +LA A+ N+ P +V+ P
Sbjct: 1293 QAGINWLWFLNKYNLHGILCDDMGLGKTLQTICILAGDHMHRQTANLANL--PSLVICPP 1350
Query: 805 STLHNWVNEISRFVPQFKILP---YWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQ 861
+ +WV E+ +F+ Q +L Y+G R+ LR K +++V SY
Sbjct: 1351 TLTGHWVYEVEKFLDQGSVLRPLHYYGFPVGREKLRSDIGTK---------CNLVVASYD 1401
Query: 862 MVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELW 921
V D + + + Y +LDE IK+ ++ K + +RL+L+GTPIQNN+ ELW
Sbjct: 1402 TVRKDIDFFSGIHFNYCVLDEGHIIKNGKTKSSKAIKRLKANHRLILSGTPIQNNVLELW 1461
Query: 922 ALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ-----LRRLHMVLKPFMLRRI 976
+L F+MP + +F FS+ I S ++ + +++ + LH + PF+LRR+
Sbjct: 1462 SLFDFLMPGFLGTEKQFVQRFSRPILSSRDAKSSAKEQEAGVLAMEALHRQVLPFLLRRV 1521
Query: 977 KKNVQSELGDKIEIDVLCDLTFRQAKLYQ-----VLKSQVSGGYDAIENAAGNDDVTSDQ 1031
K++V +L KI D+LC+L+ Q +LY+ LK + D+ + +++++
Sbjct: 1522 KEDVLKDLPPKITQDLLCELSPLQLRLYEDFSNKHLKDCLDKLGDSSSASMVTENLSAKT 1581
Query: 1032 KLVNLVMEFRKVCNHPDLFER 1052
+ + + VCNHP L R
Sbjct: 1582 HIFQALRYLQNVCNHPKLVLR 1602
Score = 125 bits (313), Expect = 7e-28
Identities = 62/127 (48%), Positives = 87/127 (67%), Gaps = 3/127 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQY---THIRLDGSSKLDDRRDLVHDWQTKPDIFIFLL 1392
HR LI+ Q+ M+D++E+ L R T++RLDGS R+D+V+++ + P I + LL
Sbjct: 1652 HRALIFCQLKAMLDIVEQDLLRRHLPSVTYLRLDGSVPASQRQDIVNNFNSDPSIDVLLL 1711
Query: 1393 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERM 1452
+T GGLG+NLT ADTVIF + DWNP D QAMDRAHR+GQ + V VYRL+ R ++EE++
Sbjct: 1712 TTMVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRNSLEEKI 1771
Query: 1453 RDRAKQK 1459
K K
Sbjct: 1772 MGLQKFK 1778
>CE16277 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 1038
Score = 164 bits (416), Expect = 8e-40
Identities = 95/312 (30%), Positives = 165/312 (52%), Gaps = 28/312 (8%)
Query: 744 CTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTP 803
CTL +YQL G+ WL +Y++ +N IL DEMGLGKT+Q ++ L++L + GP ++V P
Sbjct: 392 CTLHDYQLIGVKWLIMMYNKDLNAILGDEMGLGKTIQIVAFLSYLK-QIGKTGPHLIVVP 450
Query: 804 ASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMV 863
+ST+ NW+ E ++ P ++L Y+G+ ++RK LR H + V++T+Y MV
Sbjct: 451 SSTIENWIGEFHKWCPSIQLLTYYGSQDERKHLR------HRVKKQKDHIDVILTTYNMV 504
Query: 864 VS---DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQEL 920
S D + + Y+I DE +K+ S R++ L+ + ++LLTGTP+QNN+ EL
Sbjct: 505 TSKSDDKKFFKNFSLNYVIYDEGHMLKNCDSERYRGLMKVKGKKKILLTGTPLQNNLIEL 564
Query: 921 WALLHFIMPSLFDSHDEFSDWFSKDIES-----HAESNTELNQEQLRRLHMVLKPFMLRR 975
+L++F++ +F+ + E + + ++ Q+++ +L+P++LRR
Sbjct: 565 ISLMYFVLSKVFNKYCEDITHLLQHFKQLGPALDTKNKALYQQDRIEEAKAILQPYILRR 624
Query: 976 IKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVN 1035
+K V L K E + ++ Q +L YD I A + + D
Sbjct: 625 LKNQVLGSLPSKSEQIIEVEMKKPQKQL-----------YDNIVEALQQSEESGDS--YG 671
Query: 1036 LVMEFRKVCNHP 1047
+M R+ NHP
Sbjct: 672 SLMRLRQAANHP 683
Score = 131 bits (329), Expect = 9e-30
Identities = 63/133 (47%), Positives = 96/133 (71%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+VLI+ Q T M+D++E YL R Y++ RLDG + + DR+++++++ D+F+FLLSTRA
Sbjct: 771 KVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMINEFNLSKDLFVFLLSTRA 830
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GGLGINLT+A+ +I +D D+NP D QA DR HR+GQ + V V RL+ +GT+E M A
Sbjct: 831 GGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVHVTRLVSKGTVEVGMLALA 890
Query: 1457 KQKEHVQQVVMEG 1469
K+K +++ V +G
Sbjct: 891 KKKLQLEKQVTDG 903
>ECU01g0350 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 1251
Score = 162 bits (410), Expect = 4e-39
Identities = 101/314 (32%), Positives = 164/314 (52%), Gaps = 29/314 (9%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L+EYQL+GLNWL N + + I+ADEMGLGKTVQS++ + L +Y+ P +VVTP S
Sbjct: 302 LREYQLEGLNWLLNRWYYKQSCIMADEMGLGKTVQSVTFINTLFTKYDYCAPVLVVTPLS 361
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS 865
+ +W E + ++L Y N R + ++ F V++T+Y V++
Sbjct: 362 IIPHWEREFEAWT-DLRVLKYHENRPGRALIAEYEFVLKKNNLEIRLFDVLITTYDTVMA 420
Query: 866 DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLH 925
+ +L + + I DEA +K+++S L + +++LL+GTP+QNN+ ELW+LL+
Sbjct: 421 EQEHLSQFHFSVGIFDEAHRLKNAKSKAATILRTLKFNHKVLLSGTPLQNNISELWSLLN 480
Query: 926 FIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELG 985
FI P F S F F + N + +L +L+P MLRR+K++V+ +
Sbjct: 481 FIDPMRFSSLPHFLGEFKME-----------NINDVEKLQGLLRPLMLRRMKEDVEKSIP 529
Query: 986 DKIEIDVLCDLTFRQAKLYQVLKSQ-----VSGGYDAIENAAGNDDVTSDQKLVNLVMEF 1040
K E + LT Q + Y+ + + GG ++ N L+N++ME
Sbjct: 530 TKEETIIEVALTMIQKRFYRAILEKNIEFLTKGGKESAPN------------LLNVMMEL 577
Query: 1041 RKVCNHPDLFERAD 1054
RK C HP L + A+
Sbjct: 578 RKCCIHPYLIKGAE 591
Score = 143 bits (360), Expect = 2e-33
Identities = 70/142 (49%), Positives = 99/142 (69%), Gaps = 1/142 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKP-DIFIFLLST 1394
H+VLI+ QMT+ +DL+ EYL YR+Y + R+DG ++ ++R+ + + K D+F+FLLST
Sbjct: 665 HKVLIFSQMTRCLDLLAEYLAYRKYKYERIDGGARTENRQAAIDRFSDKTSDVFVFLLST 724
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGG+GINLTAADTVI +DSDWNP D QA R HR+GQT +V VYRL+ T E M D
Sbjct: 725 RAGGVGINLTAADTVIIFDSDWNPQNDLQAQARCHRIGQTSEVKVYRLVTENTYEREMFD 784
Query: 1455 RAKQKEHVQQVVMEGKAKENKQ 1476
+A K + + V++ E ++
Sbjct: 785 KAGLKLGLDRAVLQKMTFEEQK 806
>SPBP35G2.10 [R] KOG0383 Predicted helicase
Length = 1418
Score = 162 bits (409), Expect = 5e-39
Identities = 110/316 (34%), Positives = 169/316 (52%), Gaps = 32/316 (10%)
Query: 745 TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPA 804
TL YQLKGLNWL + ILADEMGLGKTVQ IS ++ L R+ + P +V+ P
Sbjct: 555 TLMPYQLKGLNWLYLRWYTHHPCILADEMGLGKTVQVISFISVLFYRHKCF-PVLVIVPH 613
Query: 805 STLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFW-----DRKHLRYGRDAPFHVMVTS 859
+T+ NW E+ ++ P +I G+ +R +R + D KH+ HV+V S
Sbjct: 614 ATVANWERELKKWAPFLQINVLVGSEKNRSLVRDYRLINQKDPKHVST------HVLVIS 667
Query: 860 YQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQE 919
V + S L+K +W+ +I+DE Q +K+ QSS + L S +LLLTGTP+QNN++E
Sbjct: 668 ASNVEREISLLRKFQWKVLIVDEGQRLKNDQSSLFYYLSSVKSDFKLLLTGTPLQNNVRE 727
Query: 920 LWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKN 979
L+ LL F+ P + + ++E + + ++ E++ LH +LKPF LRR+K
Sbjct: 728 LFNLLQFLNPMKIN---------AAELE---KRYSIIDTEKVTELHQILKPFFLRRVKSE 775
Query: 980 VQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSD-----QKLV 1034
V K+E+ + +T Q LY KS +S + N G + +S L
Sbjct: 776 VLDNFPTKVEVIIPLSMTPVQKGLY---KSILSKNLSLLRNITGYANTSSSGGQRTTSLN 832
Query: 1035 NLVMEFRKVCNHPDLF 1050
N++M+ RK HP ++
Sbjct: 833 NILMQLRKTLAHPYIY 848
Score = 110 bits (275), Expect = 2e-23
Identities = 57/156 (36%), Positives = 94/156 (59%), Gaps = 2/156 (1%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT-KPDIFIFLLST 1394
HR+L++ Q + +D++E++ Y+ + R DG+S +R+ + + ++ FLLST
Sbjct: 888 HRILLFSQFIQQLDILEDWFEYKNIAYARFDGASSEMERQSAIDSFNAPNSELSCFLLST 947
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGG+GINL +ADTVI D D+NP D QA+ RAHR GQ ++V V+ L R ++EE++
Sbjct: 948 RAGGVGINLASADTVIILDPDFNPHQDMQAIARAHRYGQKKKVLVFVLTTRDSVEEKIIQ 1007
Query: 1455 RAKQKEHVQQVVMEG-KAKENKQKIIEVEKEHSESA 1489
A++K + +++E N +K +E H A
Sbjct: 1008 NAQKKLVLDHLIVESLDQNHNSEKDLESILRHGARA 1043
>Hs17454125 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1849
Score = 161 bits (408), Expect = 6e-39
Identities = 108/336 (32%), Positives = 173/336 (51%), Gaps = 35/336 (10%)
Query: 739 PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLA----HLADRYN- 793
P + L++YQ G+NWLA L ++GIL D+MGLGKT+QSI +LA H A Y
Sbjct: 1259 PVPINAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCHRAQEYAR 1318
Query: 794 ------IWGPFIVVTPASTLHNWVNEISRFVPQFKILP--YWGNANDRKTLRKFWDRKHL 845
+ P +VV P + +WV+E+ +F + + P Y G +R L+ R +L
Sbjct: 1319 SKLAECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNL 1378
Query: 846 RYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNR 905
+V SY +V +D + + +K+ Y ILDE IK+ ++ K + R
Sbjct: 1379 ----------IVASYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYR 1428
Query: 906 LLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ----- 960
++L+GTPIQNN+ ELW+L F+MP + +F+ + K I + ++ + +++
Sbjct: 1429 IILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLA 1488
Query: 961 LRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQ-VLKSQVSGGYDAIE 1019
+ LH + PF+LRR+K++V +L KI D C L+ Q +LY+ KS+ D
Sbjct: 1489 MDALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETV 1548
Query: 1020 NAAGNDDVTSDQKL------VNLVMEFRKVCNHPDL 1049
++A + T KL + RK+CNHP L
Sbjct: 1549 SSATLSEETEKPKLKATGHVFQALQYLRKLCNHPAL 1584
Score = 124 bits (312), Expect = 9e-28
Identities = 63/135 (46%), Positives = 86/135 (63%), Gaps = 3/135 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLT---YRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLL 1392
HR+LI+ Q+ M+D++E L T++RLDGS R +V + P I + LL
Sbjct: 1645 HRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSIPPGQRHSIVSRFNNDPSIDVLLL 1704
Query: 1393 STRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERM 1452
+T GGLG+NLT ADTV+F + DWNP D QAMDRAHR+GQ R V VYRL+ RGT+EE++
Sbjct: 1705 TTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKI 1764
Query: 1453 RDRAKQKEHVQQVVM 1467
K K ++ V+
Sbjct: 1765 MGLQKFKMNIANTVI 1779
>Hs13376715 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 336
Score = 154 bits (389), Expect = 1e-36
Identities = 94/291 (32%), Positives = 160/291 (54%), Gaps = 32/291 (10%)
Query: 773 MGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNAND 832
MGLGKT+QSI+ L + I GPF+++ P ST+ NW E + ++ Y G+
Sbjct: 1 MGLGKTIQSITFLYEIL-LTGIRGPFLIIAPLSTIANWEREFRTWT-DINVVVYHGSLIS 58
Query: 833 RKTLRKFWDRKHLRYGRDAP---------FHVMVTSYQMVVSDASYLQKMKWQYMILDEA 883
R+ ++++ Y RD+ F ++T+++M++ L ++W+ +I+DEA
Sbjct: 59 RQMIQQYE-----MYFRDSQGRIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEA 113
Query: 884 QAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFS 943
+K+ + L + +++LLTGTP+QN ++EL++LLHF+ P F S F F
Sbjct: 114 HRLKNKNCKLLEGLKLMNLEHKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFG 173
Query: 944 KDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKL 1003
D+E+ +EQ+++L +LKP MLRR+K++V+ +L K E + +LT Q K
Sbjct: 174 -DLET---------EEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKY 223
Query: 1004 YQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERAD 1054
Y+ + + + + AG +V + LVN +ME RK CNHP L + A+
Sbjct: 224 YRAI---LEKNFSFLSKGAGQTNVPN---LVNTMMELRKCCNHPYLIKGAE 268
>Hs4557565 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1493
Score = 154 bits (388), Expect = 1e-36
Identities = 109/364 (29%), Positives = 174/364 (46%), Gaps = 45/364 (12%)
Query: 707 QDKARKFD-EEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLANLYDQGI 765
QDK ++ E+D E+ + F + P L L +YQ G+ WL L+ Q
Sbjct: 474 QDKEKRLKLEDDSEESDAEFDEGFKV-------PGFLFKKLFKYQQTGVRWLWELHCQQA 526
Query: 766 NGILADEMGLGKTVQSISVLAHLAD----------RYNIWGPFIVVTPASTLHNWVNEIS 815
GIL DEMGLGKT+Q I+ LA L+ R+ GP ++V P + +H WV E
Sbjct: 527 GGILGDEMGLGKTIQIIAFLAGLSYSKIRTRGSNYRFEGLGPTVIVCPTTVMHQWVKEFH 586
Query: 816 RFVPQFK--ILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKM 873
+ P F+ IL G+ +K + D H +++TSY + + +
Sbjct: 587 TWWPPFRVAILHETGSYTHKKE-KLIRDVAHCH-------GILITSYSYIRLMQDDISRY 638
Query: 874 KWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFD 933
W Y+ILDE I++ ++ F +R++L+G+P+QNN++ELW+L FI P
Sbjct: 639 DWHYVILDEGHKIRNPNAAVTLACKQFRTPHRIILSGSPMQNNLRELWSLFDFIFPGKLG 698
Query: 934 SHDEFSDWFSKDIESHAESNTELNQEQLRR-----LHMVLKPFMLRRIKKNVQSELG--D 986
+ F + FS I SN Q + L + P++LRR+K +V+ L D
Sbjct: 699 TLPVFMEQFSVPITMGGYSNASPVQVKTAYKCACVLRDTINPYLLRRMKSDVKMSLSLPD 758
Query: 987 KIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNH 1046
K E + C LT Q K+YQ + +++ + + ++ + ++ RK+CNH
Sbjct: 759 KNEQVLFCRLTDEQHKVYQ----------NFVDSKEVYRILNGEMQIFSGLIALRKICNH 808
Query: 1047 PDLF 1050
PDLF
Sbjct: 809 PDLF 812
Score = 131 bits (330), Expect = 7e-30
Identities = 63/141 (44%), Positives = 99/141 (69%), Gaps = 4/141 (2%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
RVL++ Q +M+D++E +L ++YT++++DG++ + R+ L+ + IF+FLL+TR
Sbjct: 857 RVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLITRYNEDTSIFVFLLTTRV 916
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GGLG+NLT A+ V+ YD DWNP+ D+QA +RA R+GQ +QVTVYRLL GTIEE++ R
Sbjct: 917 GGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVTVYRLLTAGTIEEKIYHRQ 976
Query: 1457 KQKEHVQQVVMEGKAKENKQK 1477
K+ + V+ K+ KQ+
Sbjct: 977 IFKQFLTNRVL----KDPKQR 993
>HsM8922362 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 310
Score = 150 bits (379), Expect = 1e-35
Identities = 70/148 (47%), Positives = 101/148 (67%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
H+VL++ QMT M+D++ +Y R + RLDGS +R +H + T P++FIFL+STR
Sbjct: 53 HKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTR 112
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGGLGINLTAADTVI YDSDWNP D QA DR HR+GQT+ V VYRL+ TI++++ +R
Sbjct: 113 AGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVER 172
Query: 1456 AKQKEHVQQVVMEGKAKENKQKIIEVEK 1483
A K ++++++ + Q + + K
Sbjct: 173 AAAKRKLEKLIIHKNHFKGGQSGLNLSK 200
>Hs14767157 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 348
Score = 150 bits (379), Expect = 1e-35
Identities = 70/148 (47%), Positives = 101/148 (67%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
H+VL++ QMT M+D++ +Y R + RLDGS +R +H + T P++FIFL+STR
Sbjct: 126 HKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSMSYSEREKNMHSFNTDPEVFIFLVSTR 185
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGGLGINLTAADTVI YDSDWNP D QA DR HR+GQT+ V VYRL+ TI++++ +R
Sbjct: 186 AGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCHRIGQTKPVVVYRLVTANTIDQKIVER 245
Query: 1456 AKQKEHVQQVVMEGKAKENKQKIIEVEK 1483
A K ++++++ + Q + + K
Sbjct: 246 AAAKRKLEKLIIHKNHFKGGQSGLNLSK 273
>YJR035w [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1085
Score = 146 bits (369), Expect = 2e-34
Identities = 107/356 (30%), Positives = 157/356 (44%), Gaps = 52/356 (14%)
Query: 739 PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPF 798
P + L YQ + WL LY Q GI+ DEMGLGKT+Q I+ +A L + GP
Sbjct: 290 PGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPV 349
Query: 799 IVVTPASTLHNWVNEISRFVPQFK--ILPYWGNA-------------------------- 830
++V PA+ + W NE + P + IL G+
Sbjct: 350 LIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDF 409
Query: 831 ------NDRKTLRKFWDRKHLRYGRDAPF---HVMVTSYQMVVSDASYLQKMKWQYMILD 881
N +T + HL D H+++T+Y + + L K+KWQY +LD
Sbjct: 410 SYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLD 469
Query: 882 EAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDW 941
E I++ S T NR++L+GTPIQNN+ ELW+L FI P + F
Sbjct: 470 EGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQ 529
Query: 942 FSKDIESHAESNTELNQEQLR-----RLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDL 996
F I +N Q Q L ++ P++LRR+K +V +L K E+ + C L
Sbjct: 530 FVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKL 589
Query: 997 TFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFER 1052
T Q Y L+ S + I+N N ++ + RK+CNHPDL +R
Sbjct: 590 TKYQRSKY--LEFLHSSDLNQIQNGKRN--------VLFGIDILRKICNHPDLLDR 635
Score = 110 bits (275), Expect = 2e-23
Identities = 53/151 (35%), Positives = 98/151 (64%), Gaps = 6/151 (3%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQ-----YTHIRLDGSSKLDDRRDLVHDWQTKPDIFIF 1390
++ L++ Q +M+D++EE+++ + ++R+DG++ + R+ LV + + +F
Sbjct: 668 YKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVF 726
Query: 1391 LLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEE 1450
LL+TR GGLG+NLT A+ +I +D DWNP+ D QA +RA R+GQ R+V++YRL++ G+IEE
Sbjct: 727 LLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEE 786
Query: 1451 RMRDRAKQKEHVQQVVMEGKAKENKQKIIEV 1481
++ R K+ + ++ ++ KI E+
Sbjct: 787 KIYHRQIFKQFLTNRILTDPKQKRFFKIHEL 817
>At1g03750 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 874
Score = 140 bits (353), Expect = 2e-32
Identities = 106/389 (27%), Positives = 182/389 (46%), Gaps = 57/389 (14%)
Query: 652 DDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNASNALKETQDKAR 711
DDS S +++K+ SKT VE D EDD K + + + E +++
Sbjct: 50 DDSYFLPSKHESKI--------SKTQVEDFDH-NEDDHKRNIKFDEEE---VDEDDERSI 97
Query: 712 KFDEEDEEDGELNFQNP------TSLGEITIDQ-------------PKMLACTLKEYQLK 752
+F E ++ P +S+GEI I P + C L E+Q +
Sbjct: 98 EFGRPGLSRAEFDYSGPYEPLMLSSIGEIPIIHVIFLPKSLTFAHVPASINCRLLEHQRE 157
Query: 753 GLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADR----------YNIWGPFIVVT 802
G+ ++ NLY GIL D+MGLGKT+Q+I+ LA + + + GP +++
Sbjct: 158 GVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDKGPVLIIC 217
Query: 803 PASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQM 862
P+S +HNW +E SR+ FK+ Y G+ D L K R V+VTS+
Sbjct: 218 PSSIIHNWESEFSRWASFFKVSVYHGSNRDM-ILEKLKARG---------VEVLVTSFDT 267
Query: 863 VVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWA 922
L + W+ +I DEA +K+ +S ++ L + R+ LTGT +QN + EL+
Sbjct: 268 FRIQGPVLSGINWEIVIADEAHRLKNEKSKLYEACLEIKTKKRIGLTGTVMQNKISELFN 327
Query: 923 LLHFIMPSLFDSHDEFSDWFSKDIE-----SHAESNTELNQEQLRRLHMVLKPFMLRRIK 977
L ++ P + + F D++ + ++ + E ++ ++ + L +L+ +MLRR K
Sbjct: 328 LFEWVAPGSLGTREHFRDFYDEPLKLGQRATAPERFVQIADKRKQHLGSLLRKYMLRRTK 387
Query: 978 KNVQSEL-GDKIEIDVLCDLTFRQAKLYQ 1005
+ L K + V C ++ Q ++YQ
Sbjct: 388 EETIGHLMMGKEDNVVFCQMSQLQRRVYQ 416
Score = 118 bits (296), Expect = 6e-26
Identities = 54/134 (40%), Positives = 89/134 (66%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
++L++ +M+D++E++L + Y+ RLDGS+ + R+ LV D+ P +FL+ST+A
Sbjct: 558 KILLFSYSVRMLDILEKFLIRKGYSFARLDGSTPTNLRQSLVDDFNASPSKQVFLISTKA 617
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GGLG+NL +A+ V+ +D +WNP+ D QA DR+ R GQ R V V+RLL G++EE + R
Sbjct: 618 GGLGLNLVSANRVVIFDPNWNPSHDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYTRQ 677
Query: 1457 KQKEHVQQVVMEGK 1470
K+ + + + GK
Sbjct: 678 VYKQQLSNIAVAGK 691
>ECU09g0410 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 695
Score = 139 bits (351), Expect = 3e-32
Identities = 111/379 (29%), Positives = 171/379 (44%), Gaps = 48/379 (12%)
Query: 679 ESIDF---ATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEIT 735
ESIDF EDD +++ A+ A K + EEDE + + G
Sbjct: 87 ESIDFEWDGAEDDRDIKVFDAKRAKAVEKYCRHMGI---EEDEFSEHIKKEGKECEG--- 140
Query: 736 IDQPKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIW 795
P L +L YQ G+ W+ LY G+LAD+MGLGKT+Q I L L +
Sbjct: 141 FSVPGFLWSSLFPYQQDGVRWMLRLYRDEKGGVLADDMGLGKTIQVIVFLGALLHS-RVV 199
Query: 796 GPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHV 855
+++ PA+ + W++E RF P +I ++G N+ V
Sbjct: 200 SKALILCPATIVSQWMDEWKRFYPFVRI--FFGFPNEDCE------------------GV 239
Query: 856 MVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQN 915
+ SY+ + ++ W +ILDE IK+ + ++ R R +L+GTPIQN
Sbjct: 240 YLMSYEKFKAG---VKNFLWDVLILDEGHRIKNKNAQITLSVKKARSRGRFVLSGTPIQN 296
Query: 916 NMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESN-TELNQEQLRR----LHMVLKP 970
N+ ELW++ F+ P L SH F++ F + I N + L E+ R L +++P
Sbjct: 297 NLGELWSIFDFVNPGLLGSHTSFNEEFEEVIRRGGYRNASNLQVEKAYRHSLMLRSLIEP 356
Query: 971 FMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSD 1030
++LRR K V +L K + V C LT Q +LY +E+ +T
Sbjct: 357 YILRRTKSQVSHKLPSKEDKIVFCSLTPAQIELYN----------RVLESKHIMKVLTGK 406
Query: 1031 QKLVNLVMEFRKVCNHPDL 1049
L++ + RKVCNHP L
Sbjct: 407 ANLLSGISMLRKVCNHPRL 425
Score = 112 bits (280), Expect = 4e-24
Identities = 52/132 (39%), Positives = 88/132 (66%), Gaps = 2/132 (1%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
++VL++ Q +M+D++E + R+YT++R+DG + R LV + D+F+FLL+T+
Sbjct: 485 NKVLVFSQTIRMLDIIERCV--RKYTYLRMDGRTPTSSRPGLVDRFNEDEDVFLFLLTTK 542
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
GGLG+NLT A ++ YD DWNP+ D+QA +RA R GQ + V +YR + + TIEE++ +
Sbjct: 543 VGGLGLNLTGASRIVIYDPDWNPSTDTQAKERAWRYGQKKGVEIYRFVCKDTIEEKVYQK 602
Query: 1456 AKQKEHVQQVVM 1467
K+ + + V+
Sbjct: 603 QIFKDLLGKKVL 614
>7296236 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 2237
Score = 139 bits (351), Expect = 3e-32
Identities = 76/216 (35%), Positives = 126/216 (58%), Gaps = 7/216 (3%)
Query: 745 TLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPA 804
+L+ YQL+GLNWL + N ILADEMGLGKT+QS++ + H Y I GPF+V+ P
Sbjct: 2021 SLRPYQLEGLNWLKFSWYNTHNCILADEMGLGKTIQSLTFV-HSVYEYGIRGPFLVIAPL 2079
Query: 805 STLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGR----DAPFHVMVTSY 860
ST+ NW E + ++ Y G+ ++ ++ + G+ F+V++T++
Sbjct: 2080 STIPNWQREFEGWT-DMNVVVYHGSVTSKQMIQDYEYYYKTESGKVLKEPIKFNVLITTF 2138
Query: 861 QMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQEL 920
+M+V+D L+ W+ ++DEA +K+ + L + +R+LL+GTP+QNN+ EL
Sbjct: 2139 EMIVTDYMDLKAFNWRLCVIDEAHRLKNRNCKLLEGLRQLNLEHRVLLSGTPLQNNISEL 2198
Query: 921 WALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTEL 956
++LL+F+ PS F S +EF F + + ES+ L
Sbjct: 2199 FSLLNFLEPSQFSSQEEFMSEFG-SLRTEEESDGAL 2233
>At2g18760 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1187
Score = 138 bits (348), Expect = 6e-32
Identities = 106/383 (27%), Positives = 168/383 (43%), Gaps = 53/383 (13%)
Query: 706 TQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLANLYDQGI 765
T + + +D +D + N ++ L E ++ P+ + L +YQ G+ WL L+ Q
Sbjct: 346 TTSSCEEEELDDFDDADDNERSSVQL-EGGLNIPECIFRKLFDYQRVGVQWLWELHCQRA 404
Query: 766 NGILADEMGLGKTVQSISVLA--HLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKI 823
GI+ DEMGLGKT+Q +S L H + Y P I++ P + L W E ++ P F +
Sbjct: 405 GGIIGDEMGLGKTIQVLSFLGSLHFSKMYK---PSIIICPVTLLRQWRREAQKWYPDFHV 461
Query: 824 LPYWGNAND---------------------------RKTLRKFWDRKHLRYGRDAPFHVM 856
+A D + K WD L ++ ++
Sbjct: 462 EILHDSAQDSGHGKGQGKASESDYDSESSVDSDHEPKSKNTKKWDSL-LNRVLNSESGLL 520
Query: 857 VTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNN 916
+T+Y+ + L ++W Y +LDE I++ S +R+++TG PIQN
Sbjct: 521 ITTYEQLRLQGEKLLNIEWGYAVLDEGHRIRNPNSDITLVCKQLQTVHRIIMTGAPIQNK 580
Query: 917 MQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESN-TELNQEQLRRLHMVLK----PF 971
+ ELW+L F+ P F FS I +N + L R +VL+ P+
Sbjct: 581 LTELWSLFDFVFPGKLGVLPVFEAEFSVPITVGGYANASPLQVSTAYRCAVVLRDLIMPY 640
Query: 972 MLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQ--VLKSQVSGGYDAIENAAGNDDVTS 1029
+LRR+K +V + L K E + C LT Q Y+ + S+V +D N+ DV
Sbjct: 641 LLRRMKADVNAHLTKKTEHVLFCSLTVEQRSTYRAFLASSEVEQIFDGNRNSLYGIDV-- 698
Query: 1030 DQKLVNLVMEFRKVCNHPDLFER 1052
RK+CNHPDL ER
Sbjct: 699 ----------MRKICNHPDLLER 711
Score = 127 bits (319), Expect = 1e-28
Identities = 57/133 (42%), Positives = 91/133 (67%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
HRVL++ Q +M+D++E +L +Y++ R+DG + + R L+ ++ D+F+F+L+T+
Sbjct: 744 HRVLLFSQTQQMLDILESFLVANEYSYRRMDGLTPVKQRMALIDEFNNSEDMFVFVLTTK 803
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
GGLG NLT A+ VI +D DWNP+ D QA +RA R+GQ + VTVYRL+ RGTIEE++ R
Sbjct: 804 VGGLGTNLTGANRVIIFDPDWNPSNDMQARERAWRIGQKKDVTVYRLITRGTIEEKVYHR 863
Query: 1456 AKQKEHVQQVVME 1468
K + +++
Sbjct: 864 QIYKHFLTNKILK 876
>CE15856 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1529
Score = 135 bits (339), Expect = 6e-31
Identities = 91/313 (29%), Positives = 155/313 (49%), Gaps = 42/313 (13%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPF----IVV 801
L+EYQL+G+ W+ L G++GILAD+MGLGKT+Q++ +A DR + F ++V
Sbjct: 982 LREYQLEGITWIRFLRTYGLHGILADDMGLGKTLQTMCSIALSVDRDEM-SEFHRCSLIV 1040
Query: 802 TPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQ 861
P + + +W E +RF PQ R K R H + V +Y
Sbjct: 1041 CPRTLVDHWCLEWNRFFPQ------------RVPASKNLTRCH-------GAEICVIAYD 1081
Query: 862 MVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELW 921
+ + +Y+ W Y++LDE +++S+ WK ++RL+L+GTP+QN+ +LW
Sbjct: 1082 ELKT--AYMMDRVWNYIVLDEGHVMRNSKLRAWKFASQLVGKSRLILSGTPVQNSPADLW 1139
Query: 922 ALLHFIMPSLFDSHDEFSDWFSKDI-----ESHAESNTELNQEQLRRLHMVLKPFMLRRI 976
+L ++MP S +F F K I E++ + + +LH ++ PF++RR+
Sbjct: 1140 SLFAWLMPGYLGSEKQFRSQFLKKIMKCRLPKANEADLKAGSAAISQLHKLVLPFVMRRL 1199
Query: 977 KKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNL 1036
K V EL +K D C+LT Q ++Y+ + ++ + + LV L
Sbjct: 1200 KTEVLKELPEKNVQDYECELTEDQKEIYRFV----------VDRCTSSQEDVGLSSLVTL 1249
Query: 1037 VMEFRKVCNHPDL 1049
+ RK+ +H L
Sbjct: 1250 I-TLRKLTDHTKL 1261
Score = 117 bits (292), Expect = 2e-25
Identities = 61/136 (44%), Positives = 85/136 (61%), Gaps = 4/136 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQY----THIRLDGSSKLDDRRDLVHDWQTKPDIFIFL 1391
HR LI+ Q L+ + L ++ +H+ LDGS DR +V+ + I + +
Sbjct: 1321 HRALIFCQWKTSAKLVSDALKSGEFGSVVSHLVLDGSVPAGDRMKMVNRFNEDKTIDVLI 1380
Query: 1392 LSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEER 1451
L+T GG+G+NLT ADTVIF D DWNP D QA+DRAHRLGQTR V VYRL+ +GT+EE+
Sbjct: 1381 LTTHVGGVGLNLTGADTVIFLDHDWNPMKDLQAIDRAHRLGQTRNVNVYRLITQGTVEEK 1440
Query: 1452 MRDRAKQKEHVQQVVM 1467
+ AK K + Q ++
Sbjct: 1441 VMSLAKFKLNTAQALI 1456
>SPCP25A2.02c [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 973
Score = 134 bits (338), Expect = 8e-31
Identities = 100/342 (29%), Positives = 154/342 (44%), Gaps = 46/342 (13%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L YQ+ + WL LY Q GI+ DEMGLGKT+Q +S L+ L P ++V PA+
Sbjct: 277 LFRYQVTCVQWLWELYCQEAGGIIGDEMGLGKTIQIVSFLSSLHHSGKFQKPALIVCPAT 336
Query: 806 TLHNWVNEI---------------------SRFVPQFKILPYWGNANDRKT---LRKFWD 841
+ WVNE SR Q++ A + KT LR
Sbjct: 337 LMKQWVNEFHTWWAPLRVVVLHATGSGQRASREKRQYESDASESEAEESKTSIKLRGASS 396
Query: 842 RKHLRYGRD------APFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWK 895
H RY ++ H+++T+Y + + +W Y +LDE I++ S
Sbjct: 397 SFH-RYAKNLVESVFTRGHILITTYAGLRIYGDLILPREWGYCVLDEGHKIRNPDSEISI 455
Query: 896 TLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTE 955
+ NR++L+GTPIQNN+ ELW L F+ P + F + F+ I +N
Sbjct: 456 SCKQIRTVNRIILSGTPIQNNLTELWNLFDFVFPGRLGTLPVFQNQFALPINIGGYANAS 515
Query: 956 LNQEQLR-----RLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQ 1010
Q Q L ++ P++LRR+K +V ++L K E + C LT Q K YQ
Sbjct: 516 NVQVQTAYKCACMLRDLISPYLLRRMKLDVAADLPKKSEQVLFCKLTPLQRKAYQ----- 570
Query: 1011 VSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFER 1052
D ++ + + ++++ + RK+CNHPDL R
Sbjct: 571 -----DFLQGSDMQKILNGKRQMLYGIDILRKICNHPDLVTR 607
Score = 115 bits (288), Expect = 5e-25
Identities = 62/143 (43%), Positives = 91/143 (63%), Gaps = 5/143 (3%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHI-RLDGSSKLDDRRDLVHDWQTKPDIFIFLLST 1394
HR L++ Q +M+D++E L H R+DGS+ + R+DLV ++ +FLL+T
Sbjct: 642 HRTLLFSQTRQMLDILEIGLKDLPDVHYCRMDGSTSIALRQDLVDNFNKNEYFDVFLLTT 701
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
R GGLG+NLT AD VI +D DWNP+ D+QA +RA RLGQ + V VYRL+ GTIEE++
Sbjct: 702 RVGGLGVNLTGADRVILFDPDWNPSTDAQARERAWRLGQKKDVVVYRLMTAGTIEEKIYH 761
Query: 1455 RAKQKEHVQQVVMEGKAKENKQK 1477
R K+ + ++ K+ KQ+
Sbjct: 762 RQIFKQFLTNKIL----KDPKQR 780
>ECU03g1530 [K] KOG0392 SNF2 family DNA-dependent ATPase domain-containing
protein
Length = 1256
Score = 134 bits (337), Expect = 1e-30
Identities = 80/280 (28%), Positives = 149/280 (52%), Gaps = 27/280 (9%)
Query: 742 LACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVV 801
++ L++YQ++G+ WL LY +NGILAD+MGLGKT+Q ++ L ++ Y +V+
Sbjct: 793 ISVKLRDYQMEGVKWLNFLYSFSLNGILADDMGLGKTLQVLTFLC--SEIYKTNRKVLVI 850
Query: 802 TPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQ 861
P+S +W +E+ +F P Y DR T + ++++SY+
Sbjct: 851 CPSSLTGHWKSEVKKFFPFVAAEIY--KREDRDT-----------------YSILISSYE 891
Query: 862 MVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELW 921
+D + W Y+++DE +++ Q+ + + C +++LTGTP+ N++++L
Sbjct: 892 TFRNDYLNFIEKDWFYVVVDEGHVLRNKQTILYSRMNMIRCSRKMVLTGTPVHNSVEDLI 951
Query: 922 ALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQ 981
+L +F+MP+ E+ K ++S E ++L LH + PF+LRR+K +V
Sbjct: 952 SLFNFLMPNYIGPEKEYGSLNVK----MSDSEIEKTHKRLDLLHRKVLPFILRRLKIDVL 1007
Query: 982 SELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENA 1021
+L KI D+ +L Q KLY+ + + GG +++ +A
Sbjct: 1008 KDLPPKIIRDITVELGPVQEKLYREIDEK--GGKESLGDA 1045
Score = 102 bits (254), Expect = 5e-21
Identities = 51/117 (43%), Positives = 77/117 (65%), Gaps = 2/117 (1%)
Query: 1337 RVLIYFQMTKMMDLM-EEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
++LI+FQ +DL+ ++ + ++ + RLDGS R + ++ T +FL +T+
Sbjct: 1103 KILIFFQFKSTIDLVIKDIMKKYKFKYSRLDGSVPSAARTKIAEEFNTGTTQMLFL-TTQ 1161
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERM 1452
GGLG+NLT ADTV+ Y+ DWNP D QAMDRAHR+GQ R V V+R + R T+EE++
Sbjct: 1162 VGGLGLNLTGADTVVMYEHDWNPFNDLQAMDRAHRIGQKRTVNVFRFIARNTLEEKV 1218
>At4g31900 [R] KOG0383 Predicted helicase
Length = 1067
Score = 130 bits (326), Expect = 2e-29
Identities = 65/133 (48%), Positives = 90/133 (66%), Gaps = 1/133 (0%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLST 1394
HRVLIY Q + L+E+Y T++ + + R+DG +R+ + + + + F FLLST
Sbjct: 431 HRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRIDRFNAENSNRFCFLLST 490
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
RAGG+GINL ADTVI YDSDWNP D QAM R HRLGQT +V +YRL+ +GT+EERM +
Sbjct: 491 RAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKVMIYRLIHKGTVEERMME 550
Query: 1455 RAKQKEHVQQVVM 1467
K K ++ +V+
Sbjct: 551 ITKNKMLLEHLVV 563
Score = 81.6 bits (200), Expect = 8e-15
Identities = 52/164 (31%), Positives = 88/164 (52%), Gaps = 6/164 (3%)
Query: 739 PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPF 798
P+ L TL YQL+GLN+L + + N ILADEMGLGKT+QSI+ LA L + N+ P
Sbjct: 218 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFLASLFEE-NL-SPH 275
Query: 799 IVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRK---FWDRKHLRYGRDAPFHV 855
+VV P ST+ NW E + + P ++ Y G++ R + + ++ R +D
Sbjct: 276 LVVAPLSTIRNWEREFATWAPHMNVVMYTGDSEARDVIWEHEFYFSEGRKRLKKDVLKDK 335
Query: 856 MVTSYQMVVS-DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLL 898
+ ++++ D S QK ++ +I + Q + + ++ +L
Sbjct: 336 VPPKKELILRVDMSSQQKEVYKAVITNNYQVLTKKRDAKISNVL 379
>HsM14149926 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 757
Score = 129 bits (324), Expect = 4e-29
Identities = 67/135 (49%), Positives = 93/135 (68%), Gaps = 3/135 (2%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI--FIFLLS 1393
H+VLI+ QM + +D++E+YL R+YT+ R+DG + + R+ + D KPD F+FLL
Sbjct: 23 HKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI-DRFCKPDSDRFVFLLC 81
Query: 1394 TRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMR 1453
TRAGGLGINLTAADT I +DSDWNP D QA R HR+GQ++ V VYRL+ R + E M
Sbjct: 82 TRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITRNSYEREMF 141
Query: 1454 DRAKQKEHVQQVVME 1468
D+A K + + V++
Sbjct: 142 DKASLKLGLDKAVLQ 156
>At5g63950 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1053
Score = 124 bits (311), Expect = 1e-27
Identities = 112/425 (26%), Positives = 186/425 (43%), Gaps = 65/425 (15%)
Query: 657 SMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEE 716
SM ++ V ++N + EDD+ + A + AR ++ +
Sbjct: 284 SMKTTRHIEVSEKIRTVGRSNAAKLRDLDEDDDDDDCLILSGKKAAEMKINKPARSYNAK 343
Query: 717 DEEDGELNFQNPTSLG----EITIDQPKMLACTLKEYQLKGLNWLANLYDQGINGILADE 772
E + ++ S+ ++ P +A L +Q +GLNWL +L+ QG GIL D+
Sbjct: 344 RHGYDERSLEDEGSITLTGLNLSYTLPGKIATMLYPHQREGLNWLWSLHTQGKGGILGDD 403
Query: 773 MGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNAND 832
MGLGKT+Q S LA L I +VV P + L +W+ E++ Y+G +
Sbjct: 404 MGLGKTMQICSFLAGLFHSKLIKRA-LVVAPKTLLPHWMKELATVGLSQMTREYYGTS-- 460
Query: 833 RKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQK------------MKWQYMIL 880
T + +D H+ G+ +++T+Y +V ++ LQ KW YMIL
Sbjct: 461 --TKAREYDLHHILQGKG----ILLTTYDIVRNNTKALQGDDHYTDEDDEDGNKWDYMIL 514
Query: 881 DEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSD 940
DE IK+ + R K+LL +R++++GTPIQNN++ L S + F
Sbjct: 515 DEGHLIKNPNTQRAKSLLEIPSSHRIIISGTPIQNNLKAL-------------SFNRFKQ 561
Query: 941 WFSKDIESHAESNTELNQEQL-----RRLHMVLKPFMLRRIKKNV------QSELGDKIE 989
+ I + N ++++ + L ++PF LRR+K V S+L K E
Sbjct: 562 NYEHYILRGTDKNATDREQRIGSTVAKNLREHIQPFFLRRLKSEVFGDDGATSKLSKKDE 621
Query: 990 IDVLCDLTFRQAKLYQVLKSQ--VSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP 1047
I V LT Q +LY+ + V +D AA + +K+C+HP
Sbjct: 622 IVVWLRLTACQRQLYEAFLNSEIVLSAFDGSPLAA--------------LTILKKICDHP 667
Query: 1048 DLFER 1052
L +
Sbjct: 668 LLLTK 672
Score = 98.2 bits (243), Expect = 9e-20
Identities = 52/131 (39%), Positives = 83/131 (62%), Gaps = 9/131 (6%)
Query: 1343 QMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGGLGIN 1402
+++ +M L++ LT Y+ +R+DG++K DR V ++Q IFLL+++ GGLG+
Sbjct: 720 KLSFIMSLLDS-LTSNGYSFLRIDGTTKAPDRLKTVEEFQEGHVAPIFLLTSQVGGLGLT 778
Query: 1403 LTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQK--- 1459
LT AD VI D WNP+ D+Q++DRA+R+GQT+ V VYRL+ T+EE++ + K
Sbjct: 779 LTKADRVIVVDPAWNPSTDNQSVDRAYRIGQTKDVIVYRLMTSATVEEKIYRKQVYKGGL 838
Query: 1460 -----EHVQQV 1465
EH +Q+
Sbjct: 839 FKTATEHKEQI 849
>Hs4506397 [L] KOG0390 DNA repair protein SNF2 family
Length = 747
Score = 124 bits (310), Expect = 1e-27
Identities = 111/396 (28%), Positives = 191/396 (48%), Gaps = 33/396 (8%)
Query: 741 MLACTLKEYQLKGLNWLANLYDQ----GING-ILADEMGLGKTVQSISVLAHLADRYNIW 795
+L+ L+ +Q +G+ +L G +G I+ADEMGLGKT+Q I+++ L +
Sbjct: 148 ILSKVLRPHQREGVKFLWECVTSRRIPGSHGCIMADEMGLGKTLQCITLMWTLLRQSPEC 207
Query: 796 GPFI----VVTPASTLHNWVNEISRFVP-QFKILPYWGNANDR--KTLRKFWDRKHLRYG 848
P I VV+P+S + NW NE+ +++ + + L G + D + L F +++ R
Sbjct: 208 KPEIDKAVVVSPSSLVKNWYNEVGKWLGGRIQPLAIDGGSKDEIDQKLEGFMNQRGARVS 267
Query: 849 RDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLL 908
+++ SY+ LQK +I DE +K+S++ ++ L S + R+L+
Sbjct: 268 SP----ILIISYETFRLHVGVLQKGSVGLVICDEGHRLKNSENQTYQALDSLNTSRRVLI 323
Query: 909 TGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDI-----ESHAESNTELNQEQLRR 963
+GTPIQN++ E ++L+HF+ + + EF F I + +E++ +L +E+LR
Sbjct: 324 SGTPIQNDLLEYFSLVHFVNSGILGTAHEFKKHFELPILKGRDAAASEADRQLGEERLRE 383
Query: 964 LHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAG 1023
L ++ ++RR + L KIE V C LT Q +LY+ Q + +E G
Sbjct: 384 LTSIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQAKPAEELLE---G 440
Query: 1024 NDDVTSDQKLVNLVMEFRKVCNHPDLFERADVMSPFSFVSFGESASLSREGDFVEVNYSA 1083
V+S + +L +K+CNHP L V FV + +E S
Sbjct: 441 KMSVSSLSSITSL----KKLCNHPALIYDKCVEEEDGFVGALDLFPPGYSSKALEPQLSG 496
Query: 1084 KNLI-NYNL----PRLIYDELVVPNYNNDVDVRAKL 1114
K L+ +Y L R ++V NY +D+ KL
Sbjct: 497 KMLVLDYILAVTRSRSSDKVVLVSNYTQTLDLFEKL 532
Score = 100 bits (250), Expect = 1e-20
Identities = 51/134 (38%), Positives = 82/134 (61%), Gaps = 3/134 (2%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT--KPDIFIFLLST 1394
+V++ T+ +DL E+ R+Y ++RLDG+ + R +V + + PD F+F+LS+
Sbjct: 515 KVVLVSNYTQTLDLFEKLCRARRYLYVRLDGTMSIKKRAKVVERFNSPSSPD-FVFMLSS 573
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
+AGG G+NL A+ ++ +D DWNP D QAM R R GQ + +YRLL GTIEE++
Sbjct: 574 KAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSAGTIEEKIFQ 633
Query: 1455 RAKQKEHVQQVVME 1468
R K+ + V++
Sbjct: 634 RQSHKKALSSCVVD 647
>CE11028 [KL] KOG0387 Transcription-coupled repair protein CSB/RAD26 (contains
SNF2 family DNA-dependent ATPase domain)
Length = 1785
Score = 122 bits (307), Expect = 3e-27
Identities = 107/462 (23%), Positives = 196/462 (42%), Gaps = 63/462 (13%)
Query: 645 ELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNASNALK 704
E + + + ++S S K++ D ++ S+ + + ++ E EK R ++ S++
Sbjct: 66 ENDADVLAEPISSKSRKKSRRSDSSEFVPSEESDDDEEY--EVLEKSRKKGRKSGSSSRS 123
Query: 705 ETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACT------------------- 745
+ D D ED + L N + + ID+ K A +
Sbjct: 124 SSDDFIESDDNEDYKSAGLLDDNDSKNFKARIDKLKPEATSELVDTRMVTSEEYGKSSKP 183
Query: 746 ----------LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAD----R 791
L ++Q +G+ WL D GILADEMGLGKT+QS+ L + +
Sbjct: 184 WKVNAGVWNKLHKFQQEGVEWLQKKTDHRSGGILADEMGLGKTIQSVVFLRSIQETARTH 243
Query: 792 YNIWG--PFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRK------TLRKFWDRK 843
Y G ++V S + W+ E++++ P+ ++ + + + ++ + R+
Sbjct: 244 YKTTGLDTALIVCHVSIIAQWIKELNQWFPKARVFLLHSHCSTGRQEDYVGSIFRKLQRR 303
Query: 844 HLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCR 903
Y A +++T+Y + + K WQ +ILDE I++ + +
Sbjct: 304 RKEYPDGA---IILTTYSLFTKLKKPIVKHLWQVVILDEGHYIRNENTKCSIAMRKLMTT 360
Query: 904 NRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELN-----Q 958
R +LTGTP QN + E W L+ F+ P F F+ I + A N
Sbjct: 361 QRFILTGTPFQNRLSEFWKLVDFVHPGRLSDSATFHRNFTHIINAGANLNCSPEAAAKAY 420
Query: 959 EQLRRLHMVLKPFMLRRIKKNVQS--ELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYD 1016
E L LH+ +KP +LRR++++ + +L +K EI + C+L+ RQ +LY + +
Sbjct: 421 ECLVALHIAVKPLILRRLQEDHKEVLQLPEKQEIVLSCELSKRQRRLYM----EYGNSHQ 476
Query: 1017 AIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERADVMSP 1058
N+ + K + +CNHP ++ SP
Sbjct: 477 V------NEIIERRLKAFVGINHLTNICNHPGIYRSLSPASP 512
Score = 102 bits (253), Expect = 6e-21
Identities = 49/127 (38%), Positives = 80/127 (62%)
Query: 1336 HRVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
+RV+++ Q ++ +ME +L + + L G+ R ++ ++ I +FL++TR
Sbjct: 539 NRVILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKIIKKFEDDVSIKVFLMTTR 598
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGGLG+NLT A+ VI +D DWNP D+QA +R +R+GQT V +YRL+ GTIE+ +
Sbjct: 599 AGGLGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRLVSNGTIEDLKFFK 658
Query: 1456 AKQKEHV 1462
QKE++
Sbjct: 659 QVQKENL 665
Score = 52.8 bits (125), Expect = 4e-06
Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 1/115 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+V+I+ Q ++ ++E ++ ++ + + DR ++V+ ++ D+ I L +
Sbjct: 1409 KVVIFTQRRQVAVMLEHFMKQKRIAYCSFLKAKNAYDRENVVNYFENTTDVQILLAPSIM 1468
Query: 1397 GGLGINLTAADTVIFYDSDWNPTID-SQAMDRAHRLGQTRQVTVYRLLIRGTIEE 1450
LG+ L A+ VI +D +WNP D + + + VTV RL+ GT+E+
Sbjct: 1469 FKLGMQLKKANKVIIFDPEWNPDSDVKHTREMSFLTKKVEDVTVVRLVSEGTVED 1523
>7293730 [R] KOG0383 Predicted helicase
Length = 884
Score = 122 bits (307), Expect = 3e-27
Identities = 77/241 (31%), Positives = 125/241 (50%), Gaps = 21/241 (8%)
Query: 677 NVESIDFATEDDEKLRLMAAQNASNALKETQDKARK--FDEEDEEDGELNFQNP------ 728
+++ + A + + LR + + + + K RK ED+ED + P
Sbjct: 641 DIQGLRQAIDYYQDLRAVCTSETTQSRSKKSKKGRKSKLKVEDDEDRPVKHYTPPPEKPT 700
Query: 729 TSLGEITIDQPKMLACT---LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVL 785
T L + DQP L T L YQ++G+NWL + QGI+ ILADEMGLGKT+Q+++ L
Sbjct: 701 TDLKKKYEDQPAFLEGTGMQLHPYQIEGINWLRYSWGQGIDTILADEMGLGKTIQTVTFL 760
Query: 786 AHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRK---FWDR 842
L + GPF+V P STL NW E + P F + Y G+ + R +R+ ++
Sbjct: 761 YSLYKEGHCRGPFLVAVPLSTLVNWEREFELWAPDFYCITYIGDKDSRAVIRENELSFEE 820
Query: 843 KHLRYGR-------DAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWK 895
+R + F+V++TSY+++ DA+ L + W +++DEA +KS+QS +
Sbjct: 821 GAIRGSKVSRLRTTQYKFNVLLTSYELISMDAACLGSIDWAVLVVDEAHRLKSNQSKKSS 880
Query: 896 T 896
T
Sbjct: 881 T 881
>SPAC15A10.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 852
Score = 121 bits (304), Expect = 7e-27
Identities = 123/464 (26%), Positives = 213/464 (45%), Gaps = 58/464 (12%)
Query: 734 ITIDQPKMLACTLKEYQLKGLNWL----ANLYDQGING-ILADEMGLGKTVQSISVLAHL 788
+ ID PK LA L+ +Q++G+ +L D+ NG I+ADEMGLGKT+Q I++L L
Sbjct: 254 VVID-PK-LARILRPHQIEGVKFLYKCVTGRIDRCANGCIMADEMGLGKTLQCIALLWTL 311
Query: 789 ADRYNIWGP-----FIVVTPASTLHNWVNEISRFVPQFKILPYW--GNANDRKTLRKF-- 839
+ G I+ P+S + NW NE+ +++ + I P+ G ++ ++ +
Sbjct: 312 LKQSPQAGKPTIEKAIITCPSSLVKNWANELVKWLGKDAITPFILDGKSSKQELIMALQQ 371
Query: 840 WDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLS 899
W H GR V++ SY+ + S +L + ++ DE +K+S S + L
Sbjct: 372 WASVH---GRQVTRPVLIASYETLRSYVEHLNNAEIGMLLCDEGHRLKNSDSLTFTALDK 428
Query: 900 FHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDI-----ESHAESNT 954
+ + R++L+GTPIQN++ E ++LL+F P L S EF + I E +
Sbjct: 429 LNVQRRVILSGTPIQNDLSEYFSLLNFANPGLLGSRQEFRKNYEIPILKGRDADGTEKDK 488
Query: 955 ELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGG 1014
E +L L ++ F++RR + L K E V C+L+ Q LY+ + S
Sbjct: 489 ENGDAKLAELAKIVNRFIIRRTNDILSKYLPVKYEHVVFCNLSEFQLSLYKHFIT--SPE 546
Query: 1015 YDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDL------FERADVMSPFSFVSFGESA 1068
+ I G+ + K + L+ +K+CNHPDL E + + P F+
Sbjct: 547 INKILRGTGSQPL----KAIGLL---KKICNHPDLLNLTEDLEGCEALFPPGFI----PR 595
Query: 1069 SLSREGDFVEVNYSAKNLINYNLPRLIY-------DELV-VPNYNNDVDVRAKLL----Y 1116
L ++ + S K L+ L R++Y D++V + NY + +D+ +L Y
Sbjct: 596 ELRGRDRNIDSSLSGKMLV---LERMLYQIKQETDDKIVLISNYTSTLDLFEQLCRARGY 652
Query: 1117 HTMNIFHPANSFQLCFILSKLTDTSPNKFATLLEQNVINRAIDL 1160
+ + N + ++ D + F LL I+L
Sbjct: 653 KALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSKAGGCGINL 696
Score = 101 bits (252), Expect = 8e-21
Identities = 51/133 (38%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT-KPDIFIFLLSTR 1395
++++ T +DL E+ R Y +RLDG+ ++ R+ LV + + D F+FLLS++
Sbjct: 629 KIVLISNYTSTLDLFEQLCRARGYKALRLDGTMNVNKRQRLVDTFNDPEKDAFVFLLSSK 688
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG GINL A+ +I +D DWNP D QA+ R R GQ + VYR + GTIEE++ R
Sbjct: 689 AGGCGINLIGANRLILFDPDWNPAADQQALARVWRDGQKKDCFVYRFIATGTIEEKIFQR 748
Query: 1456 AKQKEHVQQVVME 1468
K+ + V++
Sbjct: 749 QSHKQSLSSCVVD 761
>Hs4757978 [K] KOG0385 Chromatin remodeling complex WSTF-ISWI small subunit
Length = 220
Score = 120 bits (300), Expect = 2e-26
Identities = 67/184 (36%), Positives = 104/184 (56%), Gaps = 7/184 (3%)
Query: 753 GLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVN 812
G NWLA + IL DEMGLGKT Q+I++ +LA R N GPF+++ P
Sbjct: 15 GSNWLAQRFHCQNGCILGDEMGLGKTCQTIALFIYLAGRLNDEGPFLILCPYVCFEQLER 74
Query: 813 EISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQK 872
+ + + + +R L++ D K +++ FHV++T+Y++ + DAS+L+
Sbjct: 75 RNAEICSRSFLCNICSDKEERACLQQ--DLK-----QESRFHVLLTTYEICLKDASFLKS 127
Query: 873 MKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLF 932
W +++DEA +K+ S KTL F LLLTGTPIQN++QEL++LL F+ P LF
Sbjct: 128 FPWSVLVVDEAHRLKNQSSLLHKTLSEFSVVFSLLLTGTPIQNSLQELYSLLSFVEPDLF 187
Query: 933 DSHD 936
+
Sbjct: 188 SKEE 191
>Hs6912622_2 [L] KOG0390 DNA repair protein SNF2 family
Length = 808
Score = 119 bits (299), Expect = 3e-26
Identities = 99/346 (28%), Positives = 166/346 (47%), Gaps = 48/346 (13%)
Query: 726 QNPTSLGEITIDQPKMLACTLKEYQLKGLNWLAN-LYDQGING----ILADEMGLGKTVQ 780
+N L ++ ID L L+ +Q +G+ +L + +NG ILADEMGLGKT+Q
Sbjct: 176 KNCFPLVDVVIDP--YLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQ 233
Query: 781 SISVLAHLADRYNIWGPF---------IVVTPASTLHNWVNEISRFVPQFKILPYWGNAN 831
IS++ L + GP+ ++VTP S ++NW E +++ +I
Sbjct: 234 CISLIWTLQCQ----GPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERI-------- 281
Query: 832 DRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQS 891
K D K + + + V++ SY+M++ ++ +K+ +I DE +K+S
Sbjct: 282 --KIFTVDQDHKVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAI 339
Query: 892 SRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDI----- 946
L+S C R++LTGTPIQN++QE +AL+ F+ P + S + + + I
Sbjct: 340 KTTTALISLSCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSRE 399
Query: 947 ESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLY-Q 1005
S +E EL + + L + F+LRR ++ + L KIE V C Q +LY +
Sbjct: 400 PSASEEEKELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRK 459
Query: 1006 VLKSQVSGG--YDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDL 1049
+L SQV +EN+ + + +K+CNHP L
Sbjct: 460 LLNSQVVRFCLQGLLENSPH----------LICIGALKKLCNHPCL 495
Score = 99.0 bits (245), Expect = 5e-20
Identities = 54/146 (36%), Positives = 85/146 (57%), Gaps = 2/146 (1%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTK-PDIFIFLLSTR 1395
+V++ T+ +++++E Y + RLDG + + R+ +V + ++ FIFLLS++
Sbjct: 560 KVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSK 619
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG+G+NL +I YD DWNP D QAM R R GQ V +YRLL GTIEE++ R
Sbjct: 620 AGGVGLNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQR 679
Query: 1456 AKQKEHVQQVVME-GKAKENKQKIIE 1480
K+ + V++ K E+ Q +E
Sbjct: 680 QISKQGLCGAVVDLTKTSEHIQFSVE 705
>At3g19210 [L] KOG0390 DNA repair protein SNF2 family
Length = 688
Score = 116 bits (291), Expect = 2e-25
Identities = 134/521 (25%), Positives = 224/521 (42%), Gaps = 76/521 (14%)
Query: 686 EDDEKLRLMAAQNASNALKE-TQDKARKFDEEDEED---------GELNFQNPTSL--GE 733
ED+E L ++S++ K+ +QD + D + ED + +N L
Sbjct: 4 EDEEILSSSDCDDSSDSYKDDSQDSEGENDNPECEDLAVVSLSSDADRKSKNVKDLLSNV 63
Query: 734 ITIDQPKMLACTLKEYQLKGLNWLANLYD-----QGING-ILADEMGLGKTVQSISVLAH 787
TI +L L+ +Q +G+ ++ + ING ILAD+MGLGKT+QSI++L
Sbjct: 64 TTIMVHSVLVKFLRPHQREGVQFMFDCVSGLHGSANINGCILADDMGLGKTLQSITLLYT 123
Query: 788 LA----DRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWD-- 841
L D + I+VTP S + NW EI ++V DR L +
Sbjct: 124 LLCQGFDGTPMVKKAIIVTPTSLVSNWEAEIKKWV------------GDRIQLIALCEST 171
Query: 842 RKHLRYGRDA------PFHVMVTSYQMV-VSDASYLQKMKWQYMILDEAQAIKSSQSSRW 894
R + G D+ V++ SY+ + + + Q +I DEA +K+ Q+
Sbjct: 172 RDDVLSGIDSFTRPRSALQVLIISYETFRMHSSKFCQSESCDLLICDEAHRLKNDQTLTN 231
Query: 895 KTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDI-----ESH 949
+ L S C+ R+LL+GTP+QN+++E +A+++F P F ++ I +
Sbjct: 232 RALASLTCKRRVLLSGTPMQNDLEEFFAMVNFTNPGSLGDAAHFRHYYEAPIICGREPTA 291
Query: 950 AESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKS 1009
E L ++ L + F+LRR + + L KI V C +T Q+ LY S
Sbjct: 292 TEEEKNLAADRSAELSSKVNQFILRRTNALLSNHLPPKIIEVVCCKMTTLQSTLYNHFIS 351
Query: 1010 QVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDL--------------FERADV 1055
+ +NA K++ + +K+CNHP L FE
Sbjct: 352 SKNLKRALADNA-------KQTKVLAYITALKKLCNHPKLIYDTIKSGNPGTVGFENCLE 404
Query: 1056 MSPFSFVSFGESASLSREGDFVEVNYSAKNL--INYNLPRLIYDELV-VPNYNNDVDVRA 1112
P S A +G +VE++ L + NL R D +V V NY +D+ A
Sbjct: 405 FFPAEMFSGRSGAWTGGDGAWVELSGKMHVLSRLLANLRRKTDDRIVLVSNYTQTLDLFA 464
Query: 1113 KLL----YHTMNIFHPANSFQLCFILSKLTDTSPNKFATLL 1149
+L Y + + + ++++L D + ++FA LL
Sbjct: 465 QLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLL 505
Score = 105 bits (262), Expect = 5e-22
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKP-DIFIFLLSTR 1395
R+++ T+ +DL + R+Y +RLDGS+ + R+ LV+ D F FLLS++
Sbjct: 449 RIVLVSNYTQTLDLFAQLCRERRYPFLRLDGSTTISKRQKLVNRLNDPTKDEFAFLLSSK 508
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG G+NL A+ ++ +D DWNP D QA R R GQ ++V VYR L GTIEE++ R
Sbjct: 509 AGGCGLNLIGANRLVLFDPDWNPANDKQAAARVWRDGQKKRVYVYRFLSTGTIEEKVYQR 568
Query: 1456 AKQKEHVQQVVMEGKAKENKQKII 1479
KE +Q+V+ + + ++++
Sbjct: 569 QMSKEGLQKVIQHEQTDNSTRQVL 592
>SPBC23E6.02 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1040
Score = 107 bits (266), Expect = 2e-22
Identities = 100/379 (26%), Positives = 166/379 (43%), Gaps = 54/379 (14%)
Query: 700 SNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLAN 759
SN K D+ ++ +E ++ E +PT I P L TL E+Q +GL WL
Sbjct: 348 SNNQKVQDDQQQQLEELFKDLDEQLVNDPT----IREGTPAGLIPTLMEHQKEGLMWLKR 403
Query: 760 LYDQGING-ILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEI-SRF 817
L + G ILAD+MGLGKTVQ++++L +++TP S L W NEI ++
Sbjct: 404 LEESSKKGGILADDMGLGKTVQALALLVTRPPESKSVKTTLIITPVSLLQQWHNEILTKI 463
Query: 818 VPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMV-------------V 864
P + Y + + +K H + + +++T+Y ++ +
Sbjct: 464 APSHRPTVYIHHGSSKK---------HKIAEQLMSYDIVLTTYNVIAYEFKNKMAYDKSI 514
Query: 865 SDASYLQKMK--------WQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNN 916
D + ++K + W +ILDEAQ IK+ + + R L+GTP+QN
Sbjct: 515 EDNAPIKKFEHLPFFEAEWYRVILDEAQTIKNRNTLAARGCCLLESTYRWCLSGTPMQNG 574
Query: 917 MQELWALLHFIMPSLFDSHDEFSDW--FSKDIESHAESNTELNQEQLRRLHMVLKPFMLR 974
++E ++L+ F+ +SDW FSKD SN ++R +LK +LR
Sbjct: 575 VEEFYSLIKFLRIK------PYSDWSSFSKDFTIPLSSNIN-TSAPMKRFRGLLKAVLLR 627
Query: 975 RIKKNVQS-----ELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTS 1029
R K L K + DL+ + + Y L+ SG + +T+
Sbjct: 628 RTKNTKIDGKPILTLPPKTAVKSETDLSSSEMEFYNTLQ---SGAQIQMRKYLQEGTITT 684
Query: 1030 DQ-KLVNLVMEFRKVCNHP 1047
L+ L++ R+ C HP
Sbjct: 685 HYGSLLVLLLRLRQACCHP 703
Score = 86.3 bits (212), Expect = 3e-16
Identities = 45/130 (34%), Positives = 76/130 (57%), Gaps = 13/130 (10%)
Query: 1337 RVLIYFQMTKMMDLM-----EEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFL 1391
++LI+ Q ++L +E + Y YT G +R + +++ P++ + L
Sbjct: 885 KILIFSQFVSFLELFTVPFRQEGIKYLMYT-----GGLSTAERNQALINFEVDPNVRVLL 939
Query: 1392 LSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEER 1451
+S +AG +G+NLT A+ VI D WNP I+ QA+DRAHR+GQ + V + R++ TIEER
Sbjct: 940 ISLKAGNVGLNLTCANHVIILDPFWNPYIEEQAVDRAHRIGQDKPVNILRIVTNNTIEER 999
Query: 1452 ---MRDRAKQ 1458
++DR ++
Sbjct: 1000 VLALQDRKRE 1009
>YGL163c [L] KOG0390 DNA repair protein SNF2 family
Length = 898
Score = 106 bits (264), Expect = 3e-22
Identities = 95/374 (25%), Positives = 169/374 (44%), Gaps = 41/374 (10%)
Query: 768 ILADEMGLGKTVQSISVLAHLADR----YNIWGPFIVVTPASTLHNWVNEISRFVPQFKI 823
I+ADEMGLGKT+Q I+++ L + + I+V P+S ++NW NE+ +++ +
Sbjct: 332 IMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTL 391
Query: 824 LPY----------WGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKM 873
P GN + + + + GR+ V++ SY+ + + L+
Sbjct: 392 TPLAVDGKKSSMGGGNTTVSQAIHAWAQAQ----GRNIVKPVLIISYETLRRNVDQLKNC 447
Query: 874 KWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFD 933
M+ DE +K+ S + L S C R++L+GTPIQN++ E +ALL F P L
Sbjct: 448 NVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLG 507
Query: 934 SHDEFSDWFSKDI-----ESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKI 988
S EF F I + + QL++L ++ F++RR + L K
Sbjct: 508 SRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKY 567
Query: 989 EIDVLCDLTFRQAKLY-QVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP 1047
E + +L Q +LY +++KS+ ++ G+ + + + +K+CNHP
Sbjct: 568 EHVIFVNLKPLQNELYNKLIKSREV--KKVVKGVGGSQPLRA-------IGILKKLCNHP 618
Query: 1048 DLFERADVMSPFSFVSFGESASL--SREGDFVEVNYSAKNLINYNLPRLIYDE-----LV 1100
+L D + + ++ S+ D V+ YSAK I I E ++
Sbjct: 619 NLLNFEDEFDDEDDLELPDDYNMPGSKARD-VQTKYSAKFSILERFLHKIKTESDDKIVL 677
Query: 1101 VPNYNNDVDVRAKL 1114
+ NY +D+ K+
Sbjct: 678 ISNYTQTLDLIEKM 691
Score = 102 bits (253), Expect = 6e-21
Identities = 53/143 (37%), Positives = 87/143 (60%), Gaps = 3/143 (2%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT-KPDIFIFLLSTR 1395
++++ T+ +DL+E+ Y+ Y+ +RLDG+ ++ R+ LV + + FIFLLS++
Sbjct: 674 KIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSK 733
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG GINL A+ +I D DWNP D QA+ R R GQ + +YR + GTIEE++ R
Sbjct: 734 AGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQR 793
Query: 1456 AKQKEHVQQVVMEGKAKENKQKI 1478
K + V++ AKE+ +++
Sbjct: 794 QSMKMSLSSCVVD--AKEDVERL 814
>SPAC22F3.03c [L] KOG0390 DNA repair protein SNF2 family
Length = 768
Score = 106 bits (264), Expect = 3e-22
Identities = 87/312 (27%), Positives = 146/312 (45%), Gaps = 47/312 (15%)
Query: 727 NPTSLGEITIDQPK--------------MLACTLKEYQLKGLNWLANLY-----DQGING 767
+PT LG + + +PK L+ L +Q +G+++L + G +
Sbjct: 129 DPTVLGALVMSRPKTWDPRTHVDVVIDPFLSKHLYSHQREGVSFLYDCLLGMEGKCGYSA 188
Query: 768 ILADEMGLGKTVQSISVL------AHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQF 821
ILADEMGLGKT+Q+I+V+ ++ A+R + +VV P + L NW NE ++
Sbjct: 189 ILADEMGLGKTLQTITVVWTLLKQSYYANRSSTINNAMVVAPVTLLKNWENEFYNWLGHE 248
Query: 822 KILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQK----MKWQY 877
+I Y A + ++F K + +++T Y+ V +YL+ +
Sbjct: 249 RIHVYI--ARCAEDFQEFTSNK--------TYSIIITGYETV---CTYLRNYGCGIDIDL 295
Query: 878 MILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDE 937
+I DEA +KS S W TL R RLLLTGTP+QN++ E +++++FI+P + +
Sbjct: 296 LICDEAHRLKSMSSQTWITLNKLKTRKRLLLTGTPLQNDLSEYFSMVNFIIPGSLGTPNS 355
Query: 938 FSDWFSKDIESHAESNT-----ELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDV 992
F + + I N L +L+RL F LRR + L + +I +
Sbjct: 356 FKAQYERPILRSRSMNASSRDISLGAARLQRLFEFTSNFTLRRKANILAKHLPPRTDIVL 415
Query: 993 LCDLTFRQAKLY 1004
T +Q +Y
Sbjct: 416 FIKPTHQQENVY 427
Score = 86.3 bits (212), Expect = 3e-16
Identities = 45/141 (31%), Positives = 78/141 (54%), Gaps = 2/141 (1%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKP--DIFIFLLST 1394
+ +I Q + ++L+E +L+ +L GS+ +R +VH++ T + + LLS+
Sbjct: 507 KAVIVSQYKETLELIELFLSILHVRFCKLLGSTPFSERDLIVHNFNTSSFKEFSVLLLSS 566
Query: 1395 RAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRD 1454
+AGG G+NLT + +I Y+ WNP D QA+ R +R GQ R V +Y L G ++ER+
Sbjct: 567 KAGGCGLNLTGSTRLIIYEPSWNPAQDLQALSRIYRSGQKRPVCIYTFLSSGMLDERIFI 626
Query: 1455 RAKQKEHVQQVVMEGKAKENK 1475
R K+ + ++ A + K
Sbjct: 627 RQNTKQGLSSSFIDSDASQKK 647
>Hs17437081 [B] KOG0389 SNF2 family DNA-dependent ATPase
Length = 619
Score = 106 bits (264), Expect = 3e-22
Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 3/108 (2%)
Query: 732 GEITIDQPKML--ACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLA 789
G I+QP +L + +LK YQ GLNWLA ++ G+NGILADEMGLGKT+Q+I+ LA+L
Sbjct: 481 GGWNIEQPSILNQSLSLKPYQKVGLNWLALVHKHGLNGILADEMGLGKTIQAIAFLAYLY 540
Query: 790 DRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLR 837
N GP ++V PAST+ NW+ E++ + P K+L Y+G+ +RK +R
Sbjct: 541 QEGNN-GPHLIVVPASTIDNWLREVNLWCPTLKVLCYYGSQEERKQIR 587
>YBR073w [L] KOG0390 DNA repair protein SNF2 family
Length = 958
Score = 105 bits (261), Expect = 7e-22
Identities = 50/140 (35%), Positives = 79/140 (55%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+V++ T+ +D++E + +H RLDGS R +V + P IF FLLS ++
Sbjct: 683 KVVVVSNYTQTLDIIENLMNMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLLSAKS 742
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GG+G+NL +I +D+DWNP++D QAM R HR GQ + +YRL+ G I+E++ R
Sbjct: 743 GGVGLNLVGRSRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQ 802
Query: 1457 KQKEHVQQVVMEGKAKENKQ 1476
K + Q + NK+
Sbjct: 803 LMKNSLSQKFLGDSEMRNKE 822
Score = 99.8 bits (247), Expect = 3e-20
Identities = 88/345 (25%), Positives = 151/345 (43%), Gaps = 47/345 (13%)
Query: 731 LGEITIDQPKMLACTLKEYQLKGLNWLANLYDQGING-ILADEMGLGKTVQSISVLAHLA 789
L TI+ P + CT K L+ D I+G +LAD+MGLGKT+ SI+++ L
Sbjct: 314 LARPTIENPD-IDCTTKSLVLEN--------DSDISGCLLADDMGLGKTLMSITLIWTLI 364
Query: 790 DRY----------------NIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDR 833
+ + +VV P + + NW E +++ +I ++ +
Sbjct: 365 RQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNS 424
Query: 834 KTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKW--QYMILDEAQAIKSSQS 891
+ K R L+ R + V++ Y+ ++S + L+K K ++ DE +K+ S
Sbjct: 425 PDMDKMAVRNFLKVQRT--YQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGAS 482
Query: 892 SRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAE 951
TL S R +LLLTGTPIQN++ E + ++ FI P + S F F I +
Sbjct: 483 KILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARD 542
Query: 952 SNTELNQEQL-------RRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLY 1004
+ N+E L + + + K F+LRR ++ L K +I + C
Sbjct: 543 TANRYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFC---------- 592
Query: 1005 QVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDL 1049
+ Q+ D ++ A + + + L+ +KVCN P L
Sbjct: 593 KPYSQQILAFKDILQGARLDFGQLTFSSSLGLITLLKKVCNSPGL 637
>SPAC17A2.12 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 897
Score = 104 bits (260), Expect = 9e-22
Identities = 51/148 (34%), Positives = 87/148 (58%), Gaps = 3/148 (2%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
++L+Y Q ++ + L+ L H+R DG+ + R+ +H + D+ + L+S +A
Sbjct: 743 KILVYSQFSQYLCLVSHMLKLENIRHVRYDGTMSANQRQKSLHSFNNDKDVLVMLVSLKA 802
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
G +G+NLT A+ VI + +NP+I+ QA+DR HRLGQ + VTVYR + + TIEER+
Sbjct: 803 GSVGLNLTIANHVILQEPFYNPSIEDQAIDRVHRLGQQKPVTVYRFITKDTIEERIVSVQ 862
Query: 1457 KQKEHVQQVVMEGKAKENKQKIIEVEKE 1484
++K +Q+V E + ++KE
Sbjct: 863 RKK---RQLVKEALDSNENNPLSRLDKE 887
Score = 98.2 bits (243), Expect = 9e-20
Identities = 83/345 (24%), Positives = 159/345 (46%), Gaps = 42/345 (12%)
Query: 742 LACTLKEYQLKGLNWLANLYDQG-INGILADEMGLGKTVQSISVLAHLADRYNIWGPFIV 800
L +L +Q++G W+ ++ G++AD+MGLGKT+Q+I++L + + ++
Sbjct: 246 LLVSLLPHQVEGHAWMESMEQSSKCGGVMADDMGLGKTIQTIALLLTQKSQDPLRKTNLI 305
Query: 801 VTPASTLHNWVNEISRFV-PQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTS 859
V + LH W E+S V P K+ Y + + +K L + + + V++T+
Sbjct: 306 VVSVALLHQWAEELSTKVHPSKKLSVYIHHGSTKKNLDSY---------ELSQYDVVLTT 356
Query: 860 YQMVVSD-------------------ASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSF 900
Y M+ + A L + W ++LDEA I++ + K +
Sbjct: 357 YSMLAYEMKQNDAFNNNNPATATPPPACSLLETSWYRIVLDEAHTIRNRDTLAAKCCVKL 416
Query: 901 HCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQ 960
+ R L+GTPIQN++ E ++LL F+ + F+ S+ ++S+ ++ +
Sbjct: 417 DAKYRWCLSGTPIQNHIDEFYSLLKFLRIKPYCVWSLFAKDISRPLKSY---RADIVEAA 473
Query: 961 LRRLHMVLKPFMLRRIKKNVQS-----ELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGY 1015
L+RL ++L + RR K+ + L K V +L + LY Q+S
Sbjct: 474 LKRLRILLASTVFRRTKETRVNNLPIVNLPPKTIRTVSVNLLPEERALY---NEQMSSAQ 530
Query: 1016 DAIENAAGND-DVTSDQKLVNLVMEFRKVCNHPDLFERADVMSPF 1059
++N ND D++ L+ ++ R+ C HP L + + + + F
Sbjct: 531 SLVDNYFNNDHDLSRYGFLLVSLLRLRQFCCHPWLVKSSSLDNSF 575
>At1g61140 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1287
Score = 104 bits (260), Expect = 9e-22
Identities = 52/146 (35%), Positives = 86/146 (58%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ +++ Q TKM++L+E L + RLDG+ + R V D+ T P++ + ++S +A
Sbjct: 1132 KAIVFSQWTKMLNLLEASLVSSHIQYRRLDGTMSVAARDKAVQDFNTLPEVTVMIMSLKA 1191
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
LG+N+ AA V+ D WNPT + QA+DRAHR+GQTR VTV R ++ T+E+R+
Sbjct: 1192 ASLGLNMVAACHVLMLDLWWNPTTEDQAIDRAHRIGQTRPVTVVRFTVKDTVEDRILALQ 1251
Query: 1457 KQKEHVQQVVMEGKAKENKQKIIEVE 1482
++K + K ++Q + VE
Sbjct: 1252 QKKRMMVASAFGEDEKGSRQSHLTVE 1277
Score = 59.7 bits (143), Expect = 3e-08
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 870 LQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMP 929
L K+ W ++LDEAQ+IK+ ++ + + R L+GTPIQN++ +L++ F+
Sbjct: 789 LAKVSWFRVVLDEAQSIKNYKTQVARACWGLRAKRRWCLSGTPIQNSIDDLYSYFRFLKY 848
Query: 930 SLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIK------KNVQSE 983
+ S+ F I T + ++L +LK MLRR K K + S
Sbjct: 849 DPYSSYVLFCSTIKNPI-------TRNPVKGYQKLQAILKTVMLRRTKGSLLDGKPIISL 901
Query: 984 LGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVN---LVMEF 1040
IE+ + D T + Y L+++ + A T Q VN +++
Sbjct: 902 PPKSIELRKV-DFTVEERDFYSKLEAESRTQFREYAEAG-----TVKQNYVNILLMLLRL 955
Query: 1041 RKVCNHP 1047
R+ C+HP
Sbjct: 956 RQACDHP 962
>SPCC330.01c [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 963
Score = 103 bits (257), Expect = 2e-21
Identities = 114/453 (25%), Positives = 195/453 (42%), Gaps = 84/453 (18%)
Query: 660 NNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEE 719
++K ++ + +++++++ ESI + + K R ++A+ +S+A ++ +A+ +
Sbjct: 261 DSKVEIPEAAPSSSTESDEESIPLSYQS--KRRRVSARASSSASSSSRTQAKSIPSHERT 318
Query: 720 DGELNFQNPT------SLGEIT------IDQPKMLACTLKEYQLKGLNWLANLYDQGING 767
L Q+P L E I+QPK L L +Q +G+ WL D G
Sbjct: 319 HYRLIRQHPELEHVWEKLEEEAPREVKQIEQPKELVLNLLPFQREGVYWLKRQEDSSFGG 378
Query: 768 -ILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQ-FKILP 825
ILADEMG+GKT+Q+I++L L++ P +VV P + W EI +
Sbjct: 379 GILADEMGMGKTIQTIALL--LSEPRG--KPTLVVAPVVAIMQWKEEIDTHTNKALSTYL 434
Query: 826 YWGNANDRKTLRKFWDRKHLRYGRD-APFHVMVTSYQM-----------------VVSDA 867
Y+G A D G + + + V++TSY + VV +
Sbjct: 435 YYGQARDIS-------------GEELSSYDVVLTSYNVIESVYRKERSGFRRKNGVVKEK 481
Query: 868 SYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFI 927
S L +M++ +ILDEA IKS + + + ++ L+GTP+QN + EL++LL F+
Sbjct: 482 SLLHQMEFYRIILDEAHGIKSRTCNTARAVCGLRTTRKICLSGTPLQNRIGELFSLLRFL 541
Query: 928 MPSLF-----------DSHDEFSDWFSKDIESH--AESNTELNQEQL------------- 961
F H FSD + D H N E L
Sbjct: 542 RADPFAYYYCLQCECKSLHWRFSDRSNCDECGHKPMSHTCYFNAEMLKPIQKFGYEGPGK 601
Query: 962 ---RRLHMVLKPFMLRRIKKNVQSELG-DKIEIDVLCDL-TFRQAKLYQVLKSQVSGGYD 1016
+++H +LK MLRR K +LG ++V DL + +YQ L ++
Sbjct: 602 LAFKKVHSLLKHIMLRRTKLERADDLGLPPRVVEVRKDLFNEEEEDVYQSLYMDSKRKFN 661
Query: 1017 AIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDL 1049
A + + + L+ R++ +HPDL
Sbjct: 662 TY--LAEGVVLNNYANIFQLITRMRQMADHPDL 692
Score = 82.8 bits (203), Expect = 4e-15
Identities = 45/142 (31%), Positives = 73/142 (50%)
Query: 1339 LIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGG 1398
+++ Q T M+DL+ L + ++LDG R + + +I IFL+S +AGG
Sbjct: 814 IVFSQFTSMLDLIHWRLRKAGFNCVKLDGGMTPKARAATIEAFSNDINITIFLVSLKAGG 873
Query: 1399 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQ 1458
+ +NLT A V D WN + QAMDR HR+GQ R + V L I +IE ++ + ++
Sbjct: 874 VALNLTEASQVFMMDPWWNGAVQWQAMDRIHRIGQKRPIKVITLCIENSIESKIIELQEK 933
Query: 1459 KEHVQQVVMEGKAKENKQKIIE 1480
K + ++ K Q +E
Sbjct: 934 KAQMIHATIDQDEKALNQLSVE 955
>At3g20010 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1047
Score = 103 bits (257), Expect = 2e-21
Identities = 53/123 (43%), Positives = 78/123 (63%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ +I+ Q T M+DL+E + RLDG+ L R V ++ KPD+ + L+S +A
Sbjct: 894 KTIIFSQWTGMLDLVELRILESGIEFRRLDGTMSLAARDRAVKEFSKKPDVKVMLMSLKA 953
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
G LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV R+ I+ T+E+R+
Sbjct: 954 GNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILKLQ 1013
Query: 1457 KQK 1459
++K
Sbjct: 1014 EEK 1016
Score = 64.7 bits (156), Expect = 1e-09
Identities = 56/216 (25%), Positives = 98/216 (44%), Gaps = 21/216 (9%)
Query: 866 DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLH 925
D L K+ W ++LDEAQ IK+ ++ ++ + + R L+GTPIQN + +L++
Sbjct: 533 DCGPLGKVGWFRIVLDEAQTIKNYRTQMARSCCTLRAKRRWCLSGTPIQNTIDDLYSYFR 592
Query: 926 FIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQS--- 982
F+ +D + + ++S I+ N + + ++L VL+ MLRR K +
Sbjct: 593 FLR---YDPYAVYKSFYS-TIKVPISRN---SCQGYKKLQAVLRAIMLRRTKGTLLDGKP 645
Query: 983 --ELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVN---LV 1037
L K+ D + + Y+ L++ + A +A T Q N L+
Sbjct: 646 IINLPPKVVNLSQVDFSVAERSFYKKLEADSRSQFKAYADAG-----TLSQNYANILLLL 700
Query: 1038 MEFRKVCNHPDLFERADVMSPFSFVSFGESASLSRE 1073
+ R+ C+HP L +R + P VS L RE
Sbjct: 701 LRLRQACDHPQLVKRYN-SDPVGKVSEAAVRRLPRE 735
>At1g50410 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1056
Score = 102 bits (253), Expect = 6e-21
Identities = 52/123 (42%), Positives = 77/123 (62%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ +I+ Q T M+DL+E L RLDG+ L R V ++ PD+ + ++S +A
Sbjct: 903 KTIIFSQWTGMLDLVELSLIENSIEFRRLDGTMSLIARDRAVKEFSNDPDVKVMIMSLKA 962
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
G LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV R+ I+ T+E+R+
Sbjct: 963 GNLGLNMIAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKNTVEDRILALQ 1022
Query: 1457 KQK 1459
++K
Sbjct: 1023 EEK 1025
Score = 61.2 bits (147), Expect = 1e-08
Identities = 52/195 (26%), Positives = 88/195 (44%), Gaps = 20/195 (10%)
Query: 866 DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLH 925
D+ L K+ W ++LDEAQ IK+ ++ + + R L+GTPIQN + +L++
Sbjct: 537 DSGTLAKVGWFRVVLDEAQTIKNHRTQVARACCGLRAKRRWCLSGTPIQNTIDDLYSYFR 596
Query: 926 FIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQS--- 982
F+ +D + + F I+ N + + ++L VL+ MLRR K +
Sbjct: 597 FLK---YDPYAVYKS-FCHQIKGPISRN---SLQGYKKLQAVLRAIMLRRTKGTLLDGQP 649
Query: 983 --ELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVN---LV 1037
L K D + + Y L+S + A AAG T +Q N ++
Sbjct: 650 IINLPPKTINLSQVDFSVEERSFYVKLESDSRSQFKAYA-AAG----TLNQNYANILLML 704
Query: 1038 MEFRKVCNHPDLFER 1052
+ R+ C+HP L +R
Sbjct: 705 LRLRQACDHPQLVKR 719
>SPCC1620.14c [BK] KOG0386 Chromatin remodeling complex SWI/SNF component SWI2 and
related ATPases (DNA/RNA helicase superfamily)
Length = 430
Score = 101 bits (252), Expect = 8e-21
Identities = 48/92 (52%), Positives = 66/92 (71%)
Query: 1384 KPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLL 1443
K D++IF+LSTRAGGLG+NL ADTVI +D+DWNP D QA DRAHR+GQT++V + RL+
Sbjct: 3 KSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLI 62
Query: 1444 IRGTIEERMRDRAKQKEHVQQVVMEGKAKENK 1475
+IEE + RA+ K + V++ +NK
Sbjct: 63 TEKSIEENILSRAQYKLDLDGKVIQAGKFDNK 94
>At1g11100 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1227
Score = 100 bits (249), Expect = 2e-20
Identities = 48/116 (41%), Positives = 72/116 (61%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ +++ Q TKM+DL+E L + R DG + R V D+ T PD+ + ++S +A
Sbjct: 1074 KAIVFTQWTKMLDLLEAGLKSSGIQYRRFDGKMTVPARDAAVQDFNTLPDVSVMIMSLKA 1133
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERM 1452
LG+N+ AA VI D WNPT + QA+DRAHR+GQTR V V R ++ T+E+R+
Sbjct: 1134 ASLGLNMVAACHVIMLDLWWNPTTEDQAIDRAHRIGQTRPVKVVRFTVKDTVEDRI 1189
Score = 81.3 bits (199), Expect = 1e-14
Identities = 89/373 (23%), Positives = 148/373 (38%), Gaps = 93/373 (24%)
Query: 741 MLACTLKEYQLKGLNWLANLYDQG---INGILADEMGLGKTVQSISVLAHLADRYNIWGP 797
+LA +L +Q L+W++ G GILAD+ GLGKTV +I+++ L +R + P
Sbjct: 537 VLAVSLLRHQRIALSWMSQKETSGNPCFGGILADDQGLGKTVSTIALI--LTERSTPYLP 594
Query: 798 F----------------------------------------IVVTPASTLHNWVNEISRF 817
++V P S + W +E+ +
Sbjct: 595 CEEDSKNGGCNQSDHSQVVFNENKVVEDSLCKMRGRPAAGTLIVCPTSLMRQWADELRKK 654
Query: 818 VP---QFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSD-------- 866
V +L Y G + + D L A + V++T+Y +V
Sbjct: 655 VTLEAHLSVLVYHGCSRTK-------DPHEL-----AKYDVVITTYSLVSKRKHMDCEPV 702
Query: 867 ---ASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWAL 923
+ L ++ W ++LDEAQ+IK+ ++ H + R L+GTPIQN++ +L++
Sbjct: 703 EFLSGPLAQVSWFRVVLDEAQSIKNYKTQASIACSGLHAKRRWCLSGTPIQNSIADLYSY 762
Query: 924 LHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIK------ 977
F+ + S+ F + I S+ E + L +LK MLRR K
Sbjct: 763 FRFLKYDPYSSYQTFCETIKNPISSYP-------GEGYKTLQAILKKVMLRRTKDTLLDG 815
Query: 978 KNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVN-- 1035
K V S IE+ + D T + Y L+ + A T Q VN
Sbjct: 816 KPVISLPPKSIELRRV-DFTKEERDFYSKLECDSRDQFKEYAEAG-----TVKQNYVNIL 869
Query: 1036 -LVMEFRKVCNHP 1047
+++ R+ C HP
Sbjct: 870 LMLLRLRQACGHP 882
>At5g22750 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1029
Score = 100 bits (248), Expect = 2e-20
Identities = 44/124 (35%), Positives = 77/124 (61%)
Query: 1339 LIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGG 1398
+++ Q T +DL++ L+ ++ +RLDG+ R ++ ++ I + L+S +AGG
Sbjct: 883 ILFSQWTAFLDLLQIPLSRNNFSFVRLDGTLSQQQREKVLKEFSEDGSILVLLMSLKAGG 942
Query: 1399 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQ 1458
+GINLTAA D WNP ++ QA+ R HR+GQT++V + R +++GT+EERM +
Sbjct: 943 VGINLTAASNAFVMDPWWNPAVEEQAVMRIHRIGQTKEVKIRRFIVKGTVEERMEAVQAR 1002
Query: 1459 KEHV 1462
K+ +
Sbjct: 1003 KQRM 1006
Score = 87.0 bits (214), Expect = 2e-16
Identities = 114/479 (23%), Positives = 191/479 (39%), Gaps = 126/479 (26%)
Query: 707 QDKARKFDEEDEEDGELNFQNPTSLGEIT----IDQPKMLACTLKEYQLKGLNWLANL-- 760
QD +E+ DG+L+ N +G+ + ++ P L C L+ YQ + L+W+ L
Sbjct: 307 QDANGDENEQCISDGDLD--NIVGVGDSSGLKEMETPHTLLCELRPYQKQALHWMTQLEK 364
Query: 761 --------------------------------------------YDQGINGILADEMGLG 776
GILAD MGLG
Sbjct: 365 GNCTDEAATMLHPCWEAYCLADKRELVVYLNSFTGDATIHFPSTLQMARGGILADAMGLG 424
Query: 777 KTVQSISVL-AH---------LADRYNIWGPFIV-------VTPASTLHNWVNEISRFVP 819
KTV +IS+L AH L Y G ++ +P ++ R +
Sbjct: 425 KTVMTISLLLAHSWKAASTGFLCPNYE--GDKVISSSVDDLTSPPVKATKFLGFDKRLLE 482
Query: 820 QFKILPYWGNAND-RKTLRKFWDRK------------HLRYGRDAP--------FHVMVT 858
Q +L GN TL W + ++ YG+ P V++T
Sbjct: 483 QKSVLQNGGNLIVCPMTLLGQWKTEIEMHAKPGSLSVYVHYGQSRPKDAKLLSQSDVVIT 542
Query: 859 SYQMVVSDASY--------LQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTG 910
+Y ++ S+ S + ++W ++LDEA IK+S+S + R LTG
Sbjct: 543 TYGVLTSEFSQENSADHEGIYAVRWFRIVLDEAHTIKNSKSQISLAAAALVADRRWCLTG 602
Query: 911 TPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKP 970
TPIQNN+++L++LL F+ + + W++K ++ E E ++ L+ + +LKP
Sbjct: 603 TPIQNNLEDLYSLLRFLRIEPWGTW----AWWNKLVQKPFE---EGDERGLKLVQSILKP 655
Query: 971 FMLRRIKKNVQSELGDKIEI-------DVLCDLTFRQAKLYQVLKSQVSGGYDA-IENAA 1022
MLRR K + E G I + + C+L+ + Y L + +D +E
Sbjct: 656 IMLRRTKSSTDRE-GRPILVLPPADARVIYCELSESERDFYDALFKRSKVKFDQFVEQGK 714
Query: 1023 GNDDVTSDQKLVNLVMEFRKVCNHP-------DLFERADVMSPFSFVSFGESASLSREG 1074
+ S ++ L++ R+ C+HP D E +D+ G+S+ L REG
Sbjct: 715 VLHNYAS---ILELLLRLRQCCDHPFLVMSRGDTAEYSDLNKLSKRFLSGKSSGLEREG 770
>CE23323 [L] KOG0390 DNA repair protein SNF2 family
Length = 751
Score = 98.6 bits (244), Expect = 7e-20
Identities = 50/113 (44%), Positives = 72/113 (63%), Gaps = 1/113 (0%)
Query: 1348 MDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIF-IFLLSTRAGGLGINLTAA 1406
+D++++ Y + +RLDG +++ DR+ LV + D IFLLST+AGG+G+NL A
Sbjct: 464 LDMIQQLCEYLNFKVLRLDGKTQVPDRQKLVRTFNDHRDPSNIFLLSTKAGGVGLNLIGA 523
Query: 1407 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQK 1459
++ +DSDWNP D QAM R R GQ R +YRL+ GTIEE+M R +K
Sbjct: 524 SRLVLFDSDWNPANDQQAMARIWRDGQVRPCHIYRLITTGTIEEKMLQRQIKK 576
Score = 70.9 bits (172), Expect = 1e-11
Identities = 63/253 (24%), Positives = 113/253 (43%), Gaps = 45/253 (17%)
Query: 799 IVVTPASTLHNWVNEISRFVPQFKILPYWG-NANDRKTLRKFWDRKHLRYGRDAPFHVMV 857
+++ P+S ++NW E ++ + AND T + K + Y +V
Sbjct: 188 LIIVPSSLVNNWKAEFDKWWRLMRFPAVIALTANDITTYQS--TIKLMPY--------LV 237
Query: 858 TSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNM 917
SY + L+ +++ M+ DE +K+ KTLLS RL+LTGTP+QN+
Sbjct: 238 ISYDLAQRHVEKLKIIRFDVMVCDEGHKLKNLDGKLRKTLLSLEIPRRLILTGTPMQNDF 297
Query: 918 QELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIK 977
+E ++LL F+ PS+F S EF ++ ++ +L+ ++ MLRR
Sbjct: 298 EEFYSLLDFVRPSVFGSIVEF---------------RKMCSDRPEQLNELIDECMLRRTA 342
Query: 978 KNVQ-SELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNL 1036
+V L +K E + C + Q ++ + ++G DA+ +L
Sbjct: 343 ADVDLKHLPEKHEYILFCAASPIQKHVHSEICDYMTG--DAL----------------SL 384
Query: 1037 VMEFRKVCNHPDL 1049
+ R++ NHP L
Sbjct: 385 IFFARQLANHPKL 397
>CE25143 [L] KOG0390 DNA repair protein SNF2 family
Length = 818
Score = 98.2 bits (243), Expect = 9e-20
Identities = 79/304 (25%), Positives = 141/304 (45%), Gaps = 28/304 (9%)
Query: 768 ILADEMGLGKTVQSISVLAHLA----DRYNIWGPFIVVTPASTLHNWVNEISRFV-PQFK 822
I+ADEMGLGKT+Q IS+L L D I+V P+S + NW EI +++ +
Sbjct: 229 IMADEMGLGKTLQCISLLWTLLRQSPDACPTVSKSIIVCPSSLVKNWDKEIKKWLGTRLN 288
Query: 823 ILPYWGNANDR--KTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMIL 880
+P ++ L F +R V++ SY+ A+ L +I
Sbjct: 289 AMPVDSGKREQIIACLNSFMADSKMR----CAIPVLIISYETFRLYANILHSGDVGIVIC 344
Query: 881 DEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSD 940
DE +K+S++ ++ L C R+L++GTPIQN++ E ++L++F+ P L + EF
Sbjct: 345 DEGHRLKNSENLTYQALSGLKCARRVLISGTPIQNDLLEYFSLVNFVNPGLLGTASEFRK 404
Query: 941 WF------SKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLC 994
F +D ++ +E + +E+ + + +++ ++RR + L K E + C
Sbjct: 405 KFENAILKGRDADASSEDQKK-GEEKTKEMISLVEKCIIRRTSALLTKYLPVKYEHIICC 463
Query: 995 DLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP----DLF 1050
+ Q LY L +N D + ++ + +K+CNHP D F
Sbjct: 464 KNSTLQETLYNKLIECEK------QNRIVEKDKGATASALSFITHLKKLCNHPYLVYDEF 517
Query: 1051 ERAD 1054
++ D
Sbjct: 518 QKPD 521
Score = 94.7 bits (234), Expect = 1e-18
Identities = 50/125 (40%), Positives = 71/125 (56%), Gaps = 1/125 (0%)
Query: 1345 TKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPD-IFIFLLSTRAGGLGINL 1403
T+ +D E R Y +RLDGS + R +V + IF FLLS++AGG G+NL
Sbjct: 574 TQTIDQFMELCKLRGYDFVRLDGSMSIKQRSKIVDTFNDPASTIFCFLLSSKAGGCGLNL 633
Query: 1404 TAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQ 1463
A+ ++ +D DWNP D QAM R R GQ + +YRLL G+IEE+M R K+ +
Sbjct: 634 IGANRLVMFDPDWNPANDDQAMARVWRDGQKKMCFIYRLLATGSIEEKMFQRQTHKKALS 693
Query: 1464 QVVME 1468
V++
Sbjct: 694 SCVVD 698
>7295868 [L] KOG0390 DNA repair protein SNF2 family
Length = 784
Score = 97.8 bits (242), Expect = 1e-19
Identities = 48/140 (34%), Positives = 80/140 (56%), Gaps = 1/140 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQT-KPDIFIFLLSTR 1395
+V++ T+ +DL E+ R+Y +RLDG+ + R +V + + D F+F+LS++
Sbjct: 518 KVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSK 577
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG G+NL A+ + +D DWNP D QAM R R GQ + +YRL+ G+IEE++ R
Sbjct: 578 AGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQR 637
Query: 1456 AKQKEHVQQVVMEGKAKENK 1475
K+ + +++ K
Sbjct: 638 QTHKKSLSSTIIDNNESAEK 657
Score = 96.7 bits (239), Expect = 3e-19
Identities = 85/326 (26%), Positives = 157/326 (48%), Gaps = 28/326 (8%)
Query: 741 MLACTLKEYQLKGLNWLANLYDQ---GING-ILADEMGLGKTVQSISVLAHLADRYNIWG 796
+L+ L+ +Q +G+ ++ + NG I+ADEMGLGKT+Q ++++ L +
Sbjct: 151 LLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECK 210
Query: 797 PFI----VVTPASTLHNWVNEISRFVP-QFKILPYWGNANDR--KTLRKFWDRKHLRYGR 849
P I VV+P+S + NW E ++++ + LP G + + L +F R G
Sbjct: 211 PTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQF-SMTSARLGT 269
Query: 850 DAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLT 909
V++ SY+ A L K + +I DE +K+S + ++ L+ + R+LL+
Sbjct: 270 P----VLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLS 325
Query: 910 GTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDI-----ESHAESNTELNQEQLRRL 964
GTPIQN++ E ++L++F+ P + + F F I E + E+ + L
Sbjct: 326 GTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQEL 385
Query: 965 HMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLY-QVLKSQVSGGYDAIENAAG 1023
++ ++RR + + L K E+ + LT Q +LY LKS D + +
Sbjct: 386 IGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKS------DQVRRSLA 439
Query: 1024 NDDVTSDQKLVNLVMEFRKVCNHPDL 1049
+ + + + + +K+C+HPDL
Sbjct: 440 DCNEKASLTALADITTLKKICSHPDL 465
>YBR114w [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 790
Score = 97.4 bits (241), Expect = 1e-19
Identities = 109/473 (23%), Positives = 197/473 (41%), Gaps = 98/473 (20%)
Query: 644 NELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNASNAL 703
++ E T TD++ ++ N+ ++++++ + ++DDE L A
Sbjct: 78 SDKERTATDENTHAIKNDNDEIIEIKEERD----------VSDDDEPLTKKRKTTARKKK 127
Query: 704 KETQDKARKFDEEDEEDGELN-FQNPTSLGEITID-------------QPKMLACTLKEY 749
K+T K + E L +++ L + D QP + L +
Sbjct: 128 KKTSTKKKSPKVTPYERNTLRLYEHHPELRNVFTDLKNAPPYVPQRSKQPDGMTIKLLPF 187
Query: 750 QLKGLNWLANLYDQ-GINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLH 808
QL+GL+WL + + G+LADEMG+GKT+Q+I++L + + P +VV P L
Sbjct: 188 QLEGLHWLISQEESIYAGGVLADEMGMGKTIQTIALLMNDLTK----SPSLVVAPTVALM 243
Query: 809 NWVNEISRFVP-QFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS-- 865
W NEI + Q KI Y G + D K L+ + V++T+Y ++ S
Sbjct: 244 QWKNEIEQHTKGQLKIYIYHGASRTT-------DIKDLQ-----GYDVVLTTYAVLESVF 291
Query: 866 ---------------DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTG 910
S L + + +ILDEA IK QS+ + + + + R L+G
Sbjct: 292 RKQNYGFRRKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSG 351
Query: 911 TPIQNNMQELWALLHFIMPSLFDSH-------------------------------DEFS 939
TP+QN + E+++L+ F+ + F + + F+
Sbjct: 352 TPLQNRIGEMYSLIRFLNINPFTKYFCTKCDCASKDWKFTDRMHCDHCSHVIMQHTNFFN 411
Query: 940 DWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFR 999
+ K+I+ L E + +LK MLRR K +LG I + F
Sbjct: 412 HFMLKNIQKFGVEGPGL--ESFNNIQTLLKNIMLRRTKVERADDLGLPPRIVTVRRDFFN 469
Query: 1000 QAK--LYQVLKSQVSGGYDA-IENAAGNDDVTSDQKLVNLVMEFRKVCNHPDL 1049
+ + LY+ L + Y++ +E ++ + + L+ R++ +HPDL
Sbjct: 470 EEEKDLYRSLYTDSKRKYNSFVEEGVVLNNYAN---IFTLITRMRQLADHPDL 519
Score = 79.7 bits (195), Expect = 3e-14
Identities = 40/124 (32%), Positives = 69/124 (55%)
Query: 1339 LIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGG 1398
+++ Q T M+DL+E L + ++L GS R + + + +FL+S +AGG
Sbjct: 641 IVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGG 700
Query: 1399 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQ 1458
+ +NL A V D WNP+++ Q+ DR HR+GQ R V + R I +IE R+ + ++
Sbjct: 701 VALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIELQEK 760
Query: 1459 KEHV 1462
K ++
Sbjct: 761 KANM 764
>SPBC582.10c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 830
Score = 97.4 bits (241), Expect = 1e-19
Identities = 94/343 (27%), Positives = 152/343 (43%), Gaps = 63/343 (18%)
Query: 746 LKEYQLKGLNWLANLY----DQGINGILADEMGLGKTVQSIS-VLAH-LADRYNIWGPFI 799
L ++Q++GL WL + GILAD+MGLGKT+Q I+ +L+H L + + +
Sbjct: 233 LLDHQVQGLTWLKSRETVSKSSASGGILADDMGLGKTIQMIALILSHPLPKKKHSIKSTL 292
Query: 800 VVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTS 859
VV P S + W +E+ + + Y G A+ K L+ + + V++T+
Sbjct: 293 VVAPLSLIKQWESEVQT-KSKLTAIVYHG-ASRYKLLKVIHE-----------YDVVITT 339
Query: 860 YQMVVSD----------------ASYLQKMK-------WQYMILDEAQAIKSSQSSRWKT 896
YQ++VS+ A +K K W +ILDEA IK+ S
Sbjct: 340 YQILVSEWVSHNTTGTDGKSPTEAKSYEKKKPSLFAFYWWRIILDEAHTIKNKSSKSALA 399
Query: 897 LLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTEL 956
+ NR LTGTP+QNN+ EL++L+ F+ + F+ + D S + E N
Sbjct: 400 CCALQGINRWCLTGTPLQNNVDELYSLVKFLHINPFNDQSVWKDQISLPL-CQGEENL-- 456
Query: 957 NQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYD 1016
+RL M+L MLRR K +++ G + L + +Y+V+ D
Sbjct: 457 ---VFKRLRMLLSVIMLRRTKTLLEANAG---KDGTGGALKLSKRLVYKVICKFEESERD 510
Query: 1017 AIENAAGNDDVTSDQ------------KLVNLVMEFRKVCNHP 1047
N A N + T ++ L++ R+ CNHP
Sbjct: 511 FYSNLARNMERTMSNFVNSGKLGKNYTNILCLLLRLRQACNHP 553
Score = 85.5 bits (210), Expect = 6e-16
Identities = 47/129 (36%), Positives = 70/129 (53%), Gaps = 7/129 (5%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ +I+ Q T +D+++ +L +R DG R + ++ + L S +
Sbjct: 672 KTIIFSQFTTFLDIIDLHLRKAGIGFVRYDGRMNNRAREKSLDLLRSDSGTQVLLCSLKC 731
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERM---- 1452
G LG+NLT A VI D WNP I+ QA+DR HR+GQ R V VY+L++ TIEE++
Sbjct: 732 GALGLNLTCASRVILCDVWWNPAIEEQAIDRVHRIGQRRDVLVYKLVVENTIEEKIVELQ 791
Query: 1453 ---RDRAKQ 1458
RD AKQ
Sbjct: 792 NLKRDLAKQ 800
>CE17477 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1274
Score = 97.1 bits (240), Expect = 2e-19
Identities = 52/146 (35%), Positives = 87/146 (58%), Gaps = 14/146 (9%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQY--------------THIRLDGSSKLDDRRDLVHDWQ 1382
++LI+ Q +D++EE L RQ ++RLDG++ DR L++ +
Sbjct: 795 KILIFSQNLTALDMLEEILKKRQIRGKDGPGQRWEKNRNYLRLDGTTSGADREKLINRFN 854
Query: 1383 TKPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRL 1442
++P + +FL+STRAG LGINL +A+ I D+ WNP D+QA+ R +R GQ ++ VYRL
Sbjct: 855 SEPGLSLFLISTRAGSLGINLVSANRCIIIDACWNPCHDAQAVCRVYRYGQQKKTFVYRL 914
Query: 1443 LIRGTIEERMRDRAKQKEHVQQVVME 1468
++ ++E + +R K +QQ V++
Sbjct: 915 IMDNSMERSIFNRQISKHGLQQRVVD 940
Score = 60.5 bits (145), Expect = 2e-08
Identities = 51/183 (27%), Positives = 88/183 (47%), Gaps = 19/183 (10%)
Query: 878 MILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDE 937
++ DE IK+ + TL + + + R++LTG P+QNN+ E + ++ F+ P +
Sbjct: 460 VVCDEGHKIKNITAEISMTLGAINTKRRIVLTGYPLQNNLLEYFCMIDFVRPKYLGTRKS 519
Query: 938 FSDWFSKDIESH--AESNTELNQEQLRRLHM---VLKPFMLRRIKKNVQSELGDKIEIDV 992
F D F K I++ +S+ + + L+R H+ ++K F+ RR ++ L + E +
Sbjct: 520 FIDRFEKPIKNGQCVDSSPDDVKIALQRTHVLVELVKGFVQRRTHHLLKKILPESKEYVL 579
Query: 993 LCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEF---RKVCNHPDL 1049
L + Q +LY+ E AA ND V N +M F K+ NHPD+
Sbjct: 580 LLRKSQIQRQLYRNFVLWAKN-----EIAANNDAV------FNPLMAFSACSKIWNHPDI 628
Query: 1050 FER 1052
R
Sbjct: 629 LYR 631
>7298963 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1061
Score = 95.1 bits (235), Expect = 7e-19
Identities = 84/292 (28%), Positives = 131/292 (44%), Gaps = 64/292 (21%)
Query: 733 EITIDQPKMLACTLKEYQLKGLNWLA---NLYDQGINGILADEMGLGKTVQSISVLAHLA 789
E+ + P L +L +Q L W++ +G GILAD+MGLGKT+ IS +
Sbjct: 426 EVLAEDPVGLKVSLMNHQKHALAWMSWRERKLPRG--GILADDMGLGKTLTMISSVLACK 483
Query: 790 DRYNI-------------------------W----------GPFIVVTPASTLHNWVNEI 814
+ + W G +VV PAS L W +E+
Sbjct: 484 NGQEMSEGKDESSDSDSEDDKNKKRKSVTGWKSKGRKDTRRGGTLVVCPASLLRQWESEV 543
Query: 815 SRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKM- 873
V + K+ + N+R+T K Y RD + ++VT+YQ+V + L +
Sbjct: 544 ESKVSRQKLTVCVHHGNNRETKGK--------YLRD--YDIVVTTYQIVAREHKSLSAVF 593
Query: 874 --KWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSL 931
KW+ +ILDEA +++ +S + + R LTGTPIQN +++ALL F+ S
Sbjct: 594 GVKWRRIILDEAHVVRNHKSQSSLAVCDLRGKYRWALTGTPIQNKELDVYALLKFLRCSP 653
Query: 932 FDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSE 983
FD + W D +S N RL++++K MLRR K +QS+
Sbjct: 654 FDDLHTWKKWI--DNKSAGGQN---------RLNLLMKSLMLRRTKAQLQSD 694
Score = 84.3 bits (207), Expect = 1e-15
Identities = 40/147 (27%), Positives = 88/147 (59%), Gaps = 1/147 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIF-IFLLSTR 1395
+ ++ Q T ++D++ ++L+ + L+G+ + +R+D+V+++ + + + LLS
Sbjct: 910 KAIVVSQWTSVLDILRDHLSKDGVATLSLNGTIPVKNRQDIVNEFNDRNNQKRVLLLSLT 969
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG+G+NL A+ ++ D WNP +++QA DR +R+GQ + V +Y+ + T+E+R++
Sbjct: 970 AGGVGLNLIGANHLLLLDLHWNPQLEAQAQDRIYRVGQKKNVIIYKFMCVDTVEQRIKGL 1029
Query: 1456 AKQKEHVQQVVMEGKAKENKQKIIEVE 1482
+K + V+ G +K I +++
Sbjct: 1030 QDKKLDLADGVLTGAKVSSKLTIDDLK 1056
>YOR191w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1619
Score = 94.4 bits (233), Expect = 1e-18
Identities = 44/139 (31%), Positives = 86/139 (61%), Gaps = 2/139 (1%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYR-QYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTR 1395
+++I+ Q T +++E +L + + +++ GS R D+++++ P+ I L+S +
Sbjct: 1463 KIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPEKRILLISMK 1522
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AG G+ LT A+ V+ D WNP ++ QA DR +R+ QT++V V++L I+ ++E+R+ +
Sbjct: 1523 AGNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISEL 1582
Query: 1456 AKQKEHVQQVVME-GKAKE 1473
K+K+ + M+ GK KE
Sbjct: 1583 QKRKKEMVDSAMDPGKIKE 1601
Score = 89.0 bits (219), Expect = 5e-17
Identities = 89/392 (22%), Positives = 167/392 (41%), Gaps = 58/392 (14%)
Query: 739 PKMLACTLKEYQLKGLNWLANLYDQGING-ILADEMGLGKTVQSISVLAHLADRYNIWGP 797
P+ + L ++Q GL+WL + + G +LAD+MGLGKT+Q+I+++ +
Sbjct: 936 PEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLANRSEESKCKT 995
Query: 798 FIVVTPASTLHNWVNEISRFVPQ---FKILPYWGNANDR--------------------- 833
++V P S L W E+ V + F + G+ N +
Sbjct: 996 NLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLA 1055
Query: 834 KTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKM-----KWQYMILDEAQAIKS 888
+K W +K P + + + + Y + ++LDE Q IK+
Sbjct: 1056 NEFKKHWPKKLDGEQNQLPAVPHIQALNRLKTSNEYYSPFFCNDSTFYRILLDEGQNIKN 1115
Query: 889 SQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIES 948
+ K + + R +L+GTPIQN+M EL++L+ F+ + F + +
Sbjct: 1116 KNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQR 1175
Query: 949 HA--ESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQV 1006
+ + + E + LR++ ++L MLRR K DKI+ L +L K+ +V
Sbjct: 1176 NKQYQYDNEDRKNALRKVRVLLNAIMLRRSK-------ADKIDGKPLLEL---PPKIVEV 1225
Query: 1007 LKSQVSGG----YDAIEN--------AAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERAD 1054
+S++ G Y A+E+ N S ++ L++ R+ C H +L +
Sbjct: 1226 DESRLKGEELKFYTALESKNQALAKKLLNNSTRGSYSSVLTLLLRLRQACCHSELVVMGE 1285
Query: 1055 VMSPFSFVSFGESASLSREGDFVEVNYSAKNL 1086
+ + V+ G+S E D++ + Y ++
Sbjct: 1286 KKAEGTKVANGKSF----EDDWLRLYYKITHM 1313
>At5g05130 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 881
Score = 94.4 bits (233), Expect = 1e-18
Identities = 47/143 (32%), Positives = 89/143 (61%), Gaps = 4/143 (2%)
Query: 1339 LIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDI---FIFLLSTR 1395
+++ Q KM+ L+E L +T +RLDG+ + R ++ ++ P++ + L S +
Sbjct: 729 VVFSQFRKMLLLLETPLKAAGFTILRLDGAMTVKKRTQVIGEFGN-PELTGPVVLLASLK 787
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
A G GINLTAA V +D WNP ++ QAMDR HR+GQ ++V + R++ R +IEER+ +
Sbjct: 788 ASGTGINLTAASRVYLFDPWWNPAVEEQAMDRIHRIGQKQEVKMIRMIARNSIEERVLEL 847
Query: 1456 AKQKEHVQQVVMEGKAKENKQKI 1478
++K+++ + + K++++++
Sbjct: 848 QQKKKNLANEAFKRRQKKDEREV 870
Score = 68.9 bits (167), Expect = 6e-11
Identities = 57/260 (21%), Positives = 117/260 (44%), Gaps = 33/260 (12%)
Query: 799 IVVTPASTLHNWVNEISRF-VPQF-KILPYWGN--ANDRKTLRKFWDRKHLRYGRDAPFH 854
++V P S + W+ ++ VP K+ Y G +D L K+
Sbjct: 361 LIVCPPSVISAWITQLEEHTVPGILKVYMYHGGERTDDVNELMKY--------------D 406
Query: 855 VMVTSYQMVVSDASY----LQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTG 910
+++T+Y + + S+ ++KM+W +ILDEA IK++ + + + + R +TG
Sbjct: 407 IVLTTYGTLAVEESWEDSPVKKMEWLRIILDEAHTIKNANAQQSRVVCKLKASRRWAVTG 466
Query: 911 TPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKP 970
TPIQN +L++L+ F+ F + + + + N++ L RL +++
Sbjct: 467 TPIQNGSFDLYSLMAFLRFEPFSIKSYWQSLIQRPL-------GQGNKKGLSRLQVLMAT 519
Query: 971 FMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSD 1030
LRR K+ L K +L+ + +LY ++ + G ++N N + +
Sbjct: 520 ISLRRTKEKSLIGLPPKTVETCYVELSPEERQLYDHMEGEAKG---VVQNLINNGSLMRN 576
Query: 1031 QKLV-NLVMEFRKVCNHPDL 1049
V ++++ R++C+ L
Sbjct: 577 YSTVLSIILRLRQLCDDMSL 596
>At5g43530 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1277
Score = 93.2 bits (230), Expect = 3e-18
Identities = 45/124 (36%), Positives = 73/124 (58%)
Query: 1339 LIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGG 1398
+++ Q T +DL+E L R + +R DG R ++ ++ I L+S +AGG
Sbjct: 1131 IVFSQWTSFLDLLEIPLRRRGFEFLRFDGKLAQKGREKVLKEFNETKQKTILLMSLKAGG 1190
Query: 1399 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQ 1458
+G+NLTAA +V D WNP ++ QA+ R HR+GQ R V V R +++ T+EERM+ +
Sbjct: 1191 VGLNLTAASSVFLMDPWWNPAVEEQAIMRIHRIGQKRTVFVRRFIVKDTVEERMQQVQAR 1250
Query: 1459 KEHV 1462
K+ +
Sbjct: 1251 KQRM 1254
Score = 92.4 bits (228), Expect = 5e-18
Identities = 130/587 (22%), Positives = 238/587 (40%), Gaps = 136/587 (23%)
Query: 619 AAKKLNFLLTQTELY-SHFIGSKIKTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASK-- 675
AA ++ + LY S +I S I T+ + T S ++ + + ++ L K K
Sbjct: 475 AAPPFLTMMQEIMLYVSFYIHSSIFTDVSKSTWRIGSSPNLESTLHPLLQLFKHLTIKPY 534
Query: 676 -----------TNVESIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELN 724
+ S++ + DE+ L+A +++ ++ + DEE+ + +N
Sbjct: 535 QKAEFTPEELNSRKRSLNLEDDYDERAALLAIAKRRKGCQQSLEQNK--DEEEAPESYMN 592
Query: 725 --FQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLANLYDQGIN---------------- 766
S ++ P L C L+ YQ + L W++ ++GI+
Sbjct: 593 RVVGAADSYNLEEMEAPSTLTCNLRPYQKQALYWMSES-EKGIDVEKAAETLHPCWEAYR 651
Query: 767 -------------------------------GILADEMGLGKTVQSISVLAHLADRYN-- 793
GILAD MGLGKTV +I+++ R N
Sbjct: 652 ICDERAPSIYLNIFSGEATIQFPTATQMARGGILADAMGLGKTVMTIALILARPGRGNPE 711
Query: 794 ---------------------------IWGPFIVVTPASTLHNWVNEISRFVPQ--FKIL 824
G +++ P + L W +E+ +L
Sbjct: 712 NEDVLVADVNADKRNRKEIHMALTTVKAKGGTLIICPMALLSQWKDELETHSKPDTVSVL 771
Query: 825 PYWGN--ANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDE 882
Y+G +D K + D YG V+ ++Y+ +++ S ++ W ++LDE
Sbjct: 772 VYYGGDRTHDAKAIASH-DVVLTTYG------VLTSAYKQDMAN-SIFHRIDWYRIVLDE 823
Query: 883 AQAIKS--SQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSD 940
A IKS +Q+++ LS HCR LTGTP+QN +++L++LL F+ + +
Sbjct: 824 AHTIKSWKTQAAKATFELSSHCR--WCLTGTPLQNKLEDLYSLLCFLHVEPWCNW----A 877
Query: 941 WFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEID------VLC 994
W+SK I+ E+ + L+ + +L+P MLRR K+ E +E+ + C
Sbjct: 878 WWSKLIQKPYENG---DPRGLKLIKAILRPLMLRRTKETRDKEGSLILELPPTDVQVIEC 934
Query: 995 DLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHPDLFERAD 1054
+ + + Y L + +D + A + + ++ L++ R+ CNHP L
Sbjct: 935 EQSEAERDFYTALFKRSKVQFD--QFVAQGKVLHNYANILELLLRLRQCCNHPFL----- 987
Query: 1055 VMSPFSFVSFGESASLSREGDFVEVNYSAKNLINYNLPRLIYDELVV 1101
VMS + + SL+R F++ N + ++ N P Y E V+
Sbjct: 988 VMSRADSQQYADLDSLARR--FLDNN---PDSVSQNAPSRAYIEEVI 1029
>At1g05120 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 833
Score = 93.2 bits (230), Expect = 3e-18
Identities = 49/148 (33%), Positives = 84/148 (56%), Gaps = 4/148 (2%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ +++ Q T +DL+ L + ++L GS + R ++ ++ PD +FL+S +A
Sbjct: 682 KAIVFSQFTSFLDLINYTLGKCGVSCVQLVGSMTMAARDTAINKFKEDPDCRVFLMSLKA 741
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GG+ +NLT A V D WNP ++ QA DR HR+GQ + + V R +I T+EER+
Sbjct: 742 GGVALNLTVASHVFMMDPWWNPAVERQAQDRIHRIGQYKPIRVVRFIIENTVEERILRLQ 801
Query: 1457 KQKEHVQQVVMEGKAKENKQKIIEVEKE 1484
K+KE +V EG +++ I ++ +E
Sbjct: 802 KKKE----LVFEGTVGGSQEAIGKLTEE 825
Score = 62.4 bits (150), Expect = 5e-09
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 23/173 (13%)
Query: 703 LKETQDKARK--FDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLANL 760
L ET +K + DE ED +L+ N + E T + P L L YQ + L W
Sbjct: 96 LWETWEKEQNSWIDEHMSEDVDLDQHNAV-IAE-TAEPPSDLIMPLLRYQKEFLAWATKQ 153
Query: 761 YDQGINGILADEMGLGKTVQSIS-VLAHL-ADRYNIW---GPFIVVTPASTLHNWVNEIS 815
GILADEMG+GKT+Q+IS VLA DR G +V+ P + W+NEI+
Sbjct: 154 EQSVAGGILADEMGMGKTIQAISLVLARREVDRAQFGEAAGCTLVLCPLVAVSQWLNEIA 213
Query: 816 RFVP--QFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSD 866
RF K+L Y G A K +++F + + ++T+Y V S+
Sbjct: 214 RFTSPGSTKVLVYHG-AKRAKNIKEFMN-----------YDFVLTTYSTVESE 254
>Hs20336209 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2492
Score = 92.8 bits (229), Expect = 4e-18
Identities = 52/161 (32%), Positives = 89/161 (54%), Gaps = 24/161 (14%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTY----------------------RQYTHIRLDGSSKLDDR 1374
+VL++ Q +DL+E++L R + RLDGS+ R
Sbjct: 2036 KVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSR 2095
Query: 1375 RDLVHDWQTKPDIF--IFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1432
+ ++ + ++ +F++ST+AG LGINL AA+ VI +D+ WNP+ D Q++ R +R G
Sbjct: 2096 KKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFG 2155
Query: 1433 QTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGKAKE 1473
QT+ V VYR L +GT+E+++ DR K+ + V++ + E
Sbjct: 2156 QTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVE 2196
Score = 83.6 bits (205), Expect = 2e-15
Identities = 97/411 (23%), Positives = 180/411 (43%), Gaps = 61/411 (14%)
Query: 688 DEKLRLMAAQNASNALKETQDKARKFDEEDEEDG------ELNFQNPTSLG---EITIDQ 738
D+KLR NALKE +++ ++ E + E E+ +PT ++ +D+
Sbjct: 1486 DDKLRT----ETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDE 1541
Query: 739 P-----------KMLACTLKEYQLKGLNWLANLYDQGING---------ILADEMGLGKT 778
+ + LK +Q+ G+ ++ + + + ILA MGLGKT
Sbjct: 1542 DEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKT 1601
Query: 779 VQSISVL--AHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTL 836
+Q +S L L D+ + + +VV P +T NW+NE ++ K ++ T+
Sbjct: 1602 LQVVSFLHTVLLCDKLD-FSTALVVCPLNTALNWMNEFEKWQEGLKDDEKL-EVSELATV 1659
Query: 837 RKFWDRKHLRYGRDAPFHVMVTSYQMVVSDAS----YLQKMKW-----------QYMILD 881
++ +R ++ VM+ Y+M + A +K+K +++ D
Sbjct: 1660 KRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCD 1719
Query: 882 EAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDW 941
E +K+ S+ K + S R R++LTGTP+QNN+ E +++FI +L S EF +
Sbjct: 1720 EGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNR 1779
Query: 942 FSKDIESH--AES---NTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDL 996
F I++ A+S + + +++ L+ +L + R+ + L K E + +
Sbjct: 1780 FINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRM 1839
Query: 997 TFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP 1047
T Q KLYQ ++G + E G + KL ++ HP
Sbjct: 1840 TSIQCKLYQYYLDHLTGVGNNSEGGRGK----AGAKLFQDFQMLSRIWTHP 1886
>Hs20336207 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2288
Score = 92.8 bits (229), Expect = 4e-18
Identities = 52/161 (32%), Positives = 89/161 (54%), Gaps = 24/161 (14%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTY----------------------RQYTHIRLDGSSKLDDR 1374
+VL++ Q +DL+E++L R + RLDGS+ R
Sbjct: 1832 KVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSR 1891
Query: 1375 RDLVHDWQTKPDIF--IFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1432
+ ++ + ++ +F++ST+AG LGINL AA+ VI +D+ WNP+ D Q++ R +R G
Sbjct: 1892 KKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFG 1951
Query: 1433 QTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGKAKE 1473
QT+ V VYR L +GT+E+++ DR K+ + V++ + E
Sbjct: 1952 QTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVE 1992
Score = 83.6 bits (205), Expect = 2e-15
Identities = 97/411 (23%), Positives = 180/411 (43%), Gaps = 61/411 (14%)
Query: 688 DEKLRLMAAQNASNALKETQDKARKFDEEDEEDG------ELNFQNPTSLG---EITIDQ 738
D+KLR NALKE +++ ++ E + E E+ +PT ++ +D+
Sbjct: 1282 DDKLRT----ETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDE 1337
Query: 739 P-----------KMLACTLKEYQLKGLNWLANLYDQGING---------ILADEMGLGKT 778
+ + LK +Q+ G+ ++ + + + ILA MGLGKT
Sbjct: 1338 DEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKT 1397
Query: 779 VQSISVL--AHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTL 836
+Q +S L L D+ + + +VV P +T NW+NE ++ K ++ T+
Sbjct: 1398 LQVVSFLHTVLLCDKLD-FSTALVVCPLNTALNWMNEFEKWQEGLKDDEKL-EVSELATV 1455
Query: 837 RKFWDRKHLRYGRDAPFHVMVTSYQMVVSDAS----YLQKMKW-----------QYMILD 881
++ +R ++ VM+ Y+M + A +K+K +++ D
Sbjct: 1456 KRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCD 1515
Query: 882 EAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDW 941
E +K+ S+ K + S R R++LTGTP+QNN+ E +++FI +L S EF +
Sbjct: 1516 EGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNR 1575
Query: 942 FSKDIESH--AES---NTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDL 996
F I++ A+S + + +++ L+ +L + R+ + L K E + +
Sbjct: 1576 FINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRM 1635
Query: 997 TFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP 1047
T Q KLYQ ++G + E G + KL ++ HP
Sbjct: 1636 TSIQCKLYQYYLDHLTGVGNNSEGGRGK----AGAKLFQDFQMLSRIWTHP 1682
>Hs20336205 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 2454
Score = 92.8 bits (229), Expect = 4e-18
Identities = 52/161 (32%), Positives = 89/161 (54%), Gaps = 24/161 (14%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTY----------------------RQYTHIRLDGSSKLDDR 1374
+VL++ Q +DL+E++L R + RLDGS+ R
Sbjct: 1998 KVLVFSQSLISLDLIEDFLELASREKTEDKDKPLIYKGEGKWLRNIDYYRLDGSTTAQSR 2057
Query: 1375 RDLVHDWQTKPDIF--IFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLG 1432
+ ++ + ++ +F++ST+AG LGINL AA+ VI +D+ WNP+ D Q++ R +R G
Sbjct: 2058 KKWAEEFNDETNVRGRLFIISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFG 2117
Query: 1433 QTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGKAKE 1473
QT+ V VYR L +GT+E+++ DR K+ + V++ + E
Sbjct: 2118 QTKPVYVYRFLAQGTMEDKIYDRQVTKQSLSFRVVDQQQVE 2158
Score = 83.6 bits (205), Expect = 2e-15
Identities = 97/411 (23%), Positives = 180/411 (43%), Gaps = 61/411 (14%)
Query: 688 DEKLRLMAAQNASNALKETQDKARKFDEEDEEDG------ELNFQNPTSLG---EITIDQ 738
D+KLR NALKE +++ ++ E + E E+ +PT ++ +D+
Sbjct: 1448 DDKLRT----ETQNALKEEEERRKRIAEREREREKLREVIEIEDASPTKCPITTKLVLDE 1503
Query: 739 P-----------KMLACTLKEYQLKGLNWLANLYDQGING---------ILADEMGLGKT 778
+ + LK +Q+ G+ ++ + + + ILA MGLGKT
Sbjct: 1504 DEETKEPLVQVHRNMVIKLKPHQVDGVQFMWDCCCESVKKTKKSPGSGCILAHCMGLGKT 1563
Query: 779 VQSISVL--AHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTL 836
+Q +S L L D+ + + +VV P +T NW+NE ++ K ++ T+
Sbjct: 1564 LQVVSFLHTVLLCDKLD-FSTALVVCPLNTALNWMNEFEKWQEGLKDDEKL-EVSELATV 1621
Query: 837 RKFWDRKHLRYGRDAPFHVMVTSYQMVVSDAS----YLQKMKW-----------QYMILD 881
++ +R ++ VM+ Y+M + A +K+K +++ D
Sbjct: 1622 KRPQERSYMLQRWQEDGGVMIIGYEMYRNLAQGRNVKSRKLKEIFNKALVDPGPDFVVCD 1681
Query: 882 EAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDW 941
E +K+ S+ K + S R R++LTGTP+QNN+ E +++FI +L S EF +
Sbjct: 1682 EGHILKNEASAVSKAMNSIRSRRRIILTGTPLQNNLIEYHCMVNFIKENLLGSIKEFRNR 1741
Query: 942 FSKDIESH--AES---NTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDL 996
F I++ A+S + + +++ L+ +L + R+ + L K E + +
Sbjct: 1742 FINPIQNGQCADSTMVDVRVMKKRAHILYEMLAGCVQRKDYTALTKFLPPKHEYVLAVRM 1801
Query: 997 TFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP 1047
T Q KLYQ ++G + E G + KL ++ HP
Sbjct: 1802 TSIQCKLYQYYLDHLTGVGNNSEGGRGK----AGAKLFQDFQMLSRIWTHP 1848
>At1g08600 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1447
Score = 92.0 bits (227), Expect = 6e-18
Identities = 96/401 (23%), Positives = 169/401 (41%), Gaps = 70/401 (17%)
Query: 731 LGEITIDQPKMLACTLKEYQLKGLNWL----------ANLYDQGINGILADEMGLGKTVQ 780
+GE + P+ ++ LK +Q+ G+ ++ D+G+ ILA MGLGKT Q
Sbjct: 672 IGEEAVRVPRSISAKLKVHQVTGIRFMWENIIQSISRVKSGDKGLGCILAHTMGLGKTFQ 731
Query: 781 SISVLAHLADRYNIWG--PFIVVTPASTLHNWVNEISRFVP------------------Q 820
I+ L + A R G ++VTP + LHNW +E +++P +
Sbjct: 732 VIAFL-YTAMRCVDLGLKTALIVTPVNVLHNWRSEFEKWMPSEVKPLRIFMLGDVSRERR 790
Query: 821 FKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMIL 880
F +L W L + + ++L GR + D + ++
Sbjct: 791 FDLLTKWRKKGG-VFLMGYTNFRNLSLGRGVKDLNAARGICNALRDGPDI-------LVC 842
Query: 881 DEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSD 940
DEA IK++++ + L C+ R+ LTG+P+QNN+ E + ++ F+ S EF +
Sbjct: 843 DEAHIIKNTKADTTQALKQVKCQRRIALTGSPLQNNLMEYYCMVDFVREGFLGSSPEFRN 902
Query: 941 WFSKDIES--HAESNTELNQEQLRRLHMV---LKPFMLRRIKKNVQSELGDKIEIDVLCD 995
F IE+ H S E + +R H++ LK F+ R V+ +L K +
Sbjct: 903 RFQNPIENGQHMNSTAEDVKIMNQRSHILYEQLKGFVQRMDMNVVKKDLPPKTVFVISVK 962
Query: 996 LTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFR---KVCNHPDLFER 1052
L+ Q LYQ +E +D T ++ N ++ ++ NHP + +
Sbjct: 963 LSPLQRILYQRF----------LELYGFSDGRTDERMRKNFFAAYQVLAQILNHPGIPQL 1012
Query: 1053 ADVMSPFSFVSFGESASLSREGDFVEV--NYSAKNLINYNL 1091
E + R G V++ + S+ I+YN+
Sbjct: 1013 R-----------SEDSKNGRRGSIVDIPDDCSSDENIDYNM 1042
Score = 90.9 bits (224), Expect = 1e-17
Identities = 65/174 (37%), Positives = 92/174 (52%), Gaps = 24/174 (13%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTH-------------IRLDGSSKLDDRRDLVHDWQT 1383
+ L++ Q +DL+E YL+ R H R+DG ++ +R+ LV D
Sbjct: 1101 KALVFSQSIPTLDLIELYLS-RVPRHGKQGKFWKKGKDWYRIDGKTESSERQKLV-DRFN 1158
Query: 1384 KPD---IFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVY 1440
+PD + L+STRAG LGINL AA+ VI D WNPT D QA+ RA R GQ + V Y
Sbjct: 1159 EPDNKRVKCTLISTRAGSLGINLYAANRVIIVDGSWNPTYDLQAIFRAWRYGQKKPVFAY 1218
Query: 1441 RLLIRGTIEERMRDRAKQKEHV------QQVVMEGKAKENKQKIIEVEKEHSES 1488
RL+ RGTIEE++ R KE + +Q V +KE + E + + +S
Sbjct: 1219 RLMARGTIEEKIYKRQVTKEGLAARVVDRQQVHRTISKEEMLHLFEFDDDDEKS 1272
>7291744 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1534
Score = 90.9 bits (224), Expect = 1e-17
Identities = 110/462 (23%), Positives = 191/462 (40%), Gaps = 80/462 (17%)
Query: 643 TNELEGTMTDDSL-TSMSNNKNKVVDLTKTAASKTNVESIDFATEDDEKLRLMAAQNASN 701
++ L G +D L S ++VV + ++ + S + EDDE L + +A+N
Sbjct: 286 SSSLSGGSIEDVLHKGASVQPSEVVTIDDSSDDDCILLSEEEEEEDDEDLN--ESDDATN 343
Query: 702 ALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLA-NL 760
+ +D DE + +N +P GE T+ +A +K +Q+ G+ +L N+
Sbjct: 344 SGMHVKDIYNVPDENGQV--VVNMAHPE--GEETLYLAPQIAKVIKPHQIGGVRFLYDNI 399
Query: 761 YDQ--------GINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVN 812
+ G ILA MGLGKT+Q +S + R+ + V P +TL NW++
Sbjct: 400 IESTRRYNKSSGFGCILAHSMGLGKTLQVVS-FCDIFLRHTSAKTVLCVMPINTLQNWLS 458
Query: 813 E----ISRFVPQFKILPYWGNA---NDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMV-- 863
E I R+ + P + ND++ + L + D V++ Y++
Sbjct: 459 EFNMWIPRYSTDSNVRPRNFDIFVLNDQQKTLTARAKVILNWVHDGG--VLLIGYELFRL 516
Query: 864 --------------------VSDASYLQKMKWQYM--------ILDEAQAIKSSQSSRWK 895
+ +S L + ++ + I DE IK+S +
Sbjct: 517 LALKLVKTRKRKGSVIRPDGMDSSSDLMNLVYEALVKPGPDLVICDEGHRIKNSHAGISL 576
Query: 896 TLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIES-----HA 950
L R R++LTG P+QNN+ E W ++ F+ P+ + EF + F + I++
Sbjct: 577 ALKEIRTRRRIVLTGYPLQNNLLEYWCMVDFVRPNYLGTRTEFCNMFERPIQNGQCVDST 636
Query: 951 ESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQ 1010
+ +L + + LH +L F+ RR +Q L K E +L +T Q KLY +
Sbjct: 637 PDDIKLMRYRAHVLHSLLLGFVQRRSHTVLQLTLPQKYEYVILVKMTAFQRKLYDTFMT- 695
Query: 1011 VSGGYDAIENAAGNDDVTSDQKLVNLVMEFR---KVCNHPDL 1049
DV + N + F K+ NHPD+
Sbjct: 696 ---------------DVVRTKAFPNPLKAFAVCCKIWNHPDV 722
>CE11083 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1091
Score = 90.5 bits (223), Expect = 2e-17
Identities = 46/143 (32%), Positives = 83/143 (57%), Gaps = 1/143 (0%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDW-QTKPDIFIFLLSTR 1395
+V+I Q T +++L+E ++ + + + G + DR++ V + + K + LLS
Sbjct: 935 KVVIVSQWTSVLNLIEIHIKSSGFKYTSITGQVLVKDRQERVDSFNREKGGARVMLLSLA 994
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDR 1455
AGG+G+NLT + ++ D WNP ++ QA DR +R+GQ + V ++RL+ +GTIE+R+
Sbjct: 995 AGGVGLNLTGGNHLVMVDLHWNPALEQQAFDRIYRMGQKKDVFIHRLVTKGTIEQRVVML 1054
Query: 1456 AKQKEHVQQVVMEGKAKENKQKI 1478
K K + V++G A K+
Sbjct: 1055 QKDKVALASSVLDGNATRKMNKL 1077
Score = 76.6 bits (187), Expect = 3e-13
Identities = 76/310 (24%), Positives = 123/310 (39%), Gaps = 77/310 (24%)
Query: 737 DQPKMLACTLKEYQLKGLNWLANLYDQGI-NGILADEMGLGKTVQSISVLAHLADRYNIW 795
D PK L +Q GL W+ Q GILAD+MGLGKT+ IS++AH
Sbjct: 462 DTPKGFKLELMPHQKAGLTWMRWRETQPQPGGILADDMGLGKTLSMISLIAHQKAARRAR 521
Query: 796 ------------------------GPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNAN 831
++V PAS +H W EI R + + Y +
Sbjct: 522 REDGNDDKDKEKRKVVKEQGLIPSNGTLIVAPASLIHQWDAEIDRRLDDSVLSTYMFHGT 581
Query: 832 DRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS-------------------------- 865
++ + + R A + V++T++ ++ +
Sbjct: 582 KKQ--------RDIDARRLARYDVVITTFNLIANELIEKIRTKSKADDSSDGESDSNHTG 633
Query: 866 -------DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQ 918
D S L ++ W +ILDEA IK+ QS K + +R L+GTPI NN+
Sbjct: 634 IRRAVGKDDSVLAQICWSRVILDEAHTIKNRQSLASKAVCRLSAFSRWCLSGTPIHNNLW 693
Query: 919 ELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKK 978
+L++L+ F+ F S D++ W ES + R++++ K +LRR K
Sbjct: 694 DLYSLVRFLRIRPF-SDDKY--W--------KESIMPMKPIMADRVNLLTKNLLLRRTKD 742
Query: 979 NVQSELGDKI 988
+ K+
Sbjct: 743 QTCAVTNQKL 752
>7296909 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 701
Score = 89.7 bits (221), Expect = 3e-17
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ +I+ MMD + ++L+ + +IR+DG ++ D R D V +Q K + LLS +A
Sbjct: 537 KFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTFQKKSSCKVALLSLKA 596
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GI LTAA+ ++F + DWNP+ +QA RAHR+GQT+ V L+ T ++ + +
Sbjct: 597 CNSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNML 656
Query: 1457 KQKEHVQQVVMEGKAKENKQK 1477
K K+ V V G EN QK
Sbjct: 657 KNKQEVLSKV--GIFAENLQK 675
Score = 72.8 bits (177), Expect = 4e-12
Identities = 68/233 (29%), Positives = 114/233 (48%), Gaps = 27/233 (11%)
Query: 768 ILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYW 827
++ DEMGLGKT Q+++V + D + P +V T AST +W I +P+ I Y
Sbjct: 266 MICDEMGLGKTYQALAVADYFKDDW----PLLVCTTASTRDSWAKHIMDLLPKVPI-HYV 320
Query: 828 GNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIK 887
N+ + Y +A V++TSY M+ L + K+ ++I DE+ +K
Sbjct: 321 QVLNNNQL-----------YVGEAK--VLITSYNMMERHEDKLMQRKFGFIIFDESHTLK 367
Query: 888 SSQSSRWKTL--LSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKD 945
+S++ T L+ + +LL+GTP + EL+ L I F + EF+ +
Sbjct: 368 NSKAKCTTTAKRLTDQAKRVVLLSGTPALSRPLELFTQLQMI-DGKFMNFMEFTTRYCDG 426
Query: 946 IESHA--ESNTELNQEQLR-RLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCD 995
+S ++N + N E+L+ LH+ +MLRR K V +L +K V+ D
Sbjct: 427 KQSTFGWDANGQSNLEELKVILHL---KYMLRRTKVEVLPQLAEKNRETVVLD 476
>At1g48310 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 675
Score = 89.4 bits (220), Expect = 4e-17
Identities = 47/123 (38%), Positives = 73/123 (59%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ L++ M++ + ++L ++ IR+DGS+ R+ LV D+Q K +I +LS RA
Sbjct: 524 KFLVFAHHQSMLEELHQFLKKKKVGCIRIDGSTPASSRQALVSDFQDKDEIKAAVLSIRA 583
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
G+GI LTAA TVIF + W P QA DRAHR+GQ V ++ LL T+++ + D
Sbjct: 584 AGVGITLTAASTVIFAELSWTPGDLIQAEDRAHRIGQVSSVNIHYLLANDTVDDIIWDVV 643
Query: 1457 KQK 1459
+ K
Sbjct: 644 QSK 646
Score = 57.4 bits (137), Expect = 2e-07
Identities = 54/237 (22%), Positives = 99/237 (40%), Gaps = 20/237 (8%)
Query: 857 VTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSF--HCRNRLLLTGTPIQ 914
+ SY +V L + ++ +I DE+ +K+ Q+ R L + +LL+GTP
Sbjct: 301 IVSYDVVTKLDKLLMALDFKVVIADESHFLKNGQAKRTSACLPVIKKAQYAILLSGTPAL 360
Query: 915 NNMQELWALLHFIMPSLFDSHDEFSDWFSKDIES-HAES----------NTELNQEQLRR 963
+ EL+ L + P ++ + E+ + K + H E T
Sbjct: 361 SRPIELFKQLEALYPDVYRNIHEYGGRYCKGVSPLHIEKLPRSSYKGFFGTYQGASNHDE 420
Query: 964 LHMVLKP-FMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAA 1022
LH ++K M+RR+KK+V +EL K V DL + K L ++ I++
Sbjct: 421 LHNLMKATVMIRRLKKDVLTELPSKRRQQVFLDLAAKDMKQINALFHELKVVKSKIKDCI 480
Query: 1023 GNDDVTS----DQKLVNLVMEFRKVCNHPDLFERAD--VMSPFSFVSFGESASLSRE 1073
DD+ S ++ L+N + V P + + + + + F+ F S+ E
Sbjct: 481 SEDDIKSLKFIEKNLINKIYTDSAVAKIPAVLDYLENVIEAGCKFLVFAHHQSMLEE 537
>CE14110 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1026
Score = 89.0 bits (219), Expect = 5e-17
Identities = 48/151 (31%), Positives = 87/151 (56%), Gaps = 9/151 (5%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDW-QTKPDIFIFLLSTR 1395
+V+I Q T +++L+E+++ + + + G + DR++ V + Q K + LLS
Sbjct: 858 KVVIVSQWTSVLNLVEKHIQAGGHNYTSITGQVLVKDRQERVDSFNQEKGGAQVMLLSLT 917
Query: 1396 AGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVY--------RLLIRGT 1447
AGG+G+NL + +I D WNP ++ QA DR +R+GQ ++V ++ RL+++GT
Sbjct: 918 AGGVGLNLIGGNHLIMVDLHWNPALEQQACDRIYRMGQKKEVFIHRLNISKFCRLIVKGT 977
Query: 1448 IEERMRDRAKQKEHVQQVVMEGKAKENKQKI 1478
IE+R+ D ++K + V+EG A K+
Sbjct: 978 IEQRVMDLQEKKLALAASVLEGTATRKLNKL 1008
Score = 80.1 bits (196), Expect = 2e-14
Identities = 99/410 (24%), Positives = 158/410 (38%), Gaps = 122/410 (29%)
Query: 737 DQPKMLACTLKEYQLKGLNWLANLYDQGING-ILADEMGLGKTVQSISVLAH-------- 787
D P L L +Q GL WL Q +G ILAD+MGLGKT+ +S++ H
Sbjct: 380 DTPDGLLVELMPHQKAGLRWLVWREGQPHSGGILADDMGLGKTLSMLSLIVHQKAARRAR 439
Query: 788 --------------LADRYNIW--GPFIVVTPASTLHNWVNEISRFVPQ--FKILPYWGN 829
+A ++ +++ PAS +H W EI+R + + + G
Sbjct: 440 KESGDNAADKEKRRVAKEEGLYPSNGTLIIAPASLIHQWEAEINRRLESDLLSVFMFHGT 499
Query: 830 ANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDA---------------------- 867
R+ + K L A + V++T+Y + ++
Sbjct: 500 KKQRQI-----EPKEL-----ARYDVVITTYTLAANELMEKKAAGSKKEEDSDDESENEE 549
Query: 868 ----------SYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNM 917
S L ++ W +ILDEA AIK+ S K + +R L+GTPI NN+
Sbjct: 550 NPRRPAGKNDSPLARVAWSRVILDEAHAIKNRLSQCSKAVCRLSSFSRWCLSGTPIHNNL 609
Query: 918 QELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIK 977
+L++L+ F+ LF D + AES + R++++ K MLRR K
Sbjct: 610 WDLYSLVRFLRIPLFG-----------DRKFWAESIMPMKTGMADRVNLLTKNLMLRRTK 658
Query: 978 --------KNVQSELGDKIEIDVLCDLTFRQAKLY-------QVLKSQVSGGYDAIE--- 1019
K + + KIEI L ++ +A Y Q L Q+ D I+
Sbjct: 659 DQQCALTNKKIVNLKEKKIEIHEL-EMVGDEANGYAIMMEAAQKLVKQIVTNTDDIQKYG 717
Query: 1020 -----------------------NAAGNDDVTSDQKLVNLVMEFRKVCNH 1046
N AGN + + ++ L+M R+ C H
Sbjct: 718 QIRRRRQRGNDDEFANPYNVGPRNLAGNSNFQNMSCILLLLMRLRQACVH 767
>YLR032w [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1169
Score = 88.2 bits (217), Expect = 9e-17
Identities = 49/152 (32%), Positives = 88/152 (57%), Gaps = 6/152 (3%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHI----RLDGSSKLDDRRDLVHDWQTKPDIF--IF 1390
+V+I+ Q + +D++E+ LT+ + + DG L +R ++ D+ K I
Sbjct: 1014 QVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKIL 1073
Query: 1391 LLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEE 1450
LLS +AGG+G+NLT A D W+P+++ QA+DR HR+GQT V V R +I+ +IEE
Sbjct: 1074 LLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEE 1133
Query: 1451 RMRDRAKQKEHVQQVVMEGKAKENKQKIIEVE 1482
+M ++K + + + + + K++I E++
Sbjct: 1134 KMLRIQEKKRTIGEAMDTDEDERRKRRIEEIQ 1165
Score = 65.9 bits (159), Expect = 5e-10
Identities = 102/489 (20%), Positives = 202/489 (40%), Gaps = 96/489 (19%)
Query: 642 KTNELEGTMTDDSLTSMSNNKNKVVDLTKTAASKTNVESIDFATEDDE----KLRLMAAQ 697
+ E+ + D + N N++ K A S +++S+ + +LR Q
Sbjct: 384 QVTEVHNNLRDTQHEEETMNLNQLKTFYKAAQSSESLKSLPETEPSRDVFKLELRNYQKQ 443
Query: 698 NASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLK---GL 754
+ L+ Q+ A+ + + + N NP + A L++ + G+
Sbjct: 444 GLTWMLRREQEFAKAASDGEASETGANMINPLWKQFKWPNDMSWAAQNLQQDHVNVEDGI 503
Query: 755 NWLANLYDQGIN------------GILADEMGLGKTVQSISVL------AHLADRY---- 792
+ ANL+ + GIL+DEMGLGKTV + S++ + + D+
Sbjct: 504 FFYANLHSGEFSLAKPILKTMIKGGILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDI 563
Query: 793 ----------NIWG----PF-----IVVTPASTLHNWVNEISRF---VPQFKILPYWGNA 830
+ W P+ ++V P S L W NE ++ + + Y GN
Sbjct: 564 ENTAVSDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNV 623
Query: 831 NDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMV----------------VSDASYLQKMK 874
+ KTL P V++T+Y +V V+ +S L +
Sbjct: 624 SSLKTLLT---------KTKTPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVN 674
Query: 875 WQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDS 934
+ +I+DE I++ + K +++ + + +LTGTPI N + +L++L+ F+ +
Sbjct: 675 FYRIIIDEGHNIRNRTTVTSKAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPWRQ 734
Query: 935 HDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEID--- 991
+ + + S ES + ++ ++ +L+P +LRR K+ + +E+
Sbjct: 735 INYWKTFVSTPFES------KNYKQAFDVVNAILEPVLLRRTKQMKDKDGKPLVELPPKE 788
Query: 992 -VLCDLTFRQAK--LYQVL--KSQVSGGYDAIENAAGNDDVTSDQKLVNL-VMEFRKVCN 1045
V+ L F +++ LY+ L K++VS +++ D+ + + ++ R+VC
Sbjct: 789 VVIKRLPFSKSQDLLYKFLLDKAEVS-----VKSGIARGDLLKKYSTILVHILRLRQVCC 843
Query: 1046 HPDLFERAD 1054
HP L D
Sbjct: 844 HPGLIGSQD 852
>At1g02670 [L] KOG1002 Nucleotide excision repair protein RAD16
Length = 678
Score = 87.0 bits (214), Expect = 2e-16
Identities = 45/144 (31%), Positives = 80/144 (55%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ +++ Q T +DL+ L + ++L GS + + +++ +PD + L+S +A
Sbjct: 527 KAIVFSQFTSFLDLISYALGKSGVSCVQLVGSMSKAAKDAALKNFKEEPDCRVLLMSLQA 586
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GG+ +NLTAA V D WNP ++ QA DR HR+GQ + V V R ++ T+EE++
Sbjct: 587 GGVALNLTAASHVFMMDPWWNPAVERQAQDRIHRIGQCKPVRVVRFIMEKTVEEKILTLQ 646
Query: 1457 KQKEHVQQVVMEGKAKENKQKIIE 1480
K+KE + + + + QK+ E
Sbjct: 647 KKKEDLFESTLGDSEEAVVQKLGE 670
Score = 83.2 bits (204), Expect = 3e-15
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 20/228 (8%)
Query: 719 EDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGLNWLANLYDQGING-ILADEMGLGK 777
ED + + QN + E +QP L L +YQ + L W + G ILADEMG+GK
Sbjct: 109 EDDDFDEQNAV-IAEAA-EQPLDLIIPLLKYQKEFLAWATIQELSAVRGGILADEMGMGK 166
Query: 778 TVQSISVL-----AHLADRYNIWGPFIVVTPASTLHNWVNEISRFVP--QFKILPYWGNA 830
T+Q+IS++ A G +V+ P L W++EISR ++L Y G
Sbjct: 167 TIQAISLVLARREVDRAKSREAVGHTLVLVPPVALSQWLDEISRLTSPGSTRVLQYHGPK 226
Query: 831 NDRKTLRKFWDRKHLRYGRDAPFHVMVTSY----QMVVSDASYLQKMKWQYMILDEAQAI 886
D+ +K + Y +V + + V S L +KW +I+DEA I
Sbjct: 227 RDKNV------QKLMNYDFVLTTSPIVENEYRKDEGVDETMSPLHSIKWNRIIVDEAHDI 280
Query: 887 KSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDS 934
K+ S K + + R L+GTP+QN++ EL++L+ + + F S
Sbjct: 281 KNRSSRTAKAVFALEATYRWALSGTPLQNDVDELYSLVSYSFLNFFYS 328
>Hs20538502 [R] KOG1016 Predicted DNA helicase DEAD-box superfamily
Length = 1359
Score = 86.7 bits (213), Expect = 3e-16
Identities = 48/152 (31%), Positives = 86/152 (56%), Gaps = 20/152 (13%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQY------------------THIRLDGSSKLDDRRDLV 1378
++L++ Q + L+EE+L R+ ++ RLDGS+ +R L+
Sbjct: 631 KILVFSQSLSTLALIEEFLGKREVPCPPGTEGQGAQKWVRNISYFRLDGSTPAFERERLI 690
Query: 1379 HDWQTKPDI--FIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQ 1436
+ + ++ ++FLLSTRAG LG+NL A+ V+ +D+ WNP D+QA+ R +R GQ +
Sbjct: 691 NQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPCHDAQAVCRVYRYGQKKP 750
Query: 1437 VTVYRLLIRGTIEERMRDRAKQKEHVQQVVME 1468
+YRL+ T+E+++ DR K+ + V++
Sbjct: 751 CYIYRLVADYTLEKKIYDRQISKQGMSDRVVD 782
Score = 76.6 bits (187), Expect = 3e-13
Identities = 94/404 (23%), Positives = 166/404 (40%), Gaps = 82/404 (20%)
Query: 680 SIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGE-----LNFQNPTSLGEI 734
S D + DE + L + + + + ++ + + DEE+E+ G LN ++ +
Sbjct: 83 SEDEKSSRDEVIELSSGEEDTLHIVDSSESVSEDDEEEEKGGTHVNDVLNQRDALGRVLV 142
Query: 735 TIDQPK---------MLACTLKEYQLKGLNWLA-NLYDQ--------GINGILADEMGLG 776
++ P LA +K +Q+ G+ +L NL + G ILA MGLG
Sbjct: 143 NLNHPPEEENVFLAPQLARAVKPHQIGGIRFLYDNLVESLERFKTSSGFGCILAHSMGLG 202
Query: 777 KTVQSISVLAHLADRYNIWGPFIVVTPASTLHN-------WV---------NEISRFVPQ 820
KT+Q IS + L R+ + + P +TL N W+ N+ P+
Sbjct: 203 KTLQVISFIDVLF-RHTPAKTVLAIVPVNTLQNWLAEFNMWLPPPEALPADNKPEEVQPR 261
Query: 821 F-----------------KILPYWGNAND-----RKTLRKFWDRKHLRYGRDAPFHVMVT 858
F K++ W + + R +K GR P
Sbjct: 262 FFKVHILNDEHKTMASRAKVMADWVSEGGVLLMGYEMYRLLTLKKSFATGR--PKKTKKR 319
Query: 859 SYQMVVS--DASYLQKMKWQY-----------MILDEAQAIKSSQSSRWKTLLSFHCRNR 905
S+ +++ + Q+ + ++ +I DE IK+ Q+S + L + R R
Sbjct: 320 SHPVIIDLDEEDRQQEFRREFEKALCRPGPDVVICDEGHRIKNCQASTSQALKNIRSRRR 379
Query: 906 LLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIES-----HAESNTELNQEQ 960
++LTG P+QNN+ E W ++ F+ P + EFS+ F + I + + L + +
Sbjct: 380 VVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFERPILNGQCIDSTPQDVRLMRYR 439
Query: 961 LRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLY 1004
LH +L+ F+ RR ++ L K E +L L+ Q LY
Sbjct: 440 SHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSKIQRDLY 483
>Hs19923174 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 1162
Score = 86.7 bits (213), Expect = 3e-16
Identities = 42/134 (31%), Positives = 75/134 (55%)
Query: 1339 LIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGG 1398
+I Q T M+ ++ +L T+ +DGS R DLV + + L+S AGG
Sbjct: 1013 VIVSQWTNMLKVVALHLKKHGLTYATIDGSVNPKQRMDLVEAFNHSRGPQVMLISLLAGG 1072
Query: 1399 LGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQ 1458
+G+NLT + + D WNP+++ QA DR +R+GQ + V ++R + GT+EE++ ++
Sbjct: 1073 VGLNLTGGNHLFLLDMHWNPSLEDQACDRIYRVGQQKDVVIHRFVCEGTVEEKILQLQEK 1132
Query: 1459 KEHVQQVVMEGKAK 1472
K+ + + V+ G +
Sbjct: 1133 KKDLAKQVLSGSGE 1146
Score = 80.5 bits (197), Expect = 2e-14
Identities = 76/308 (24%), Positives = 137/308 (43%), Gaps = 64/308 (20%)
Query: 718 EEDGELNFQNPTSLGEITI-DQPKMLACTLKEYQLKGLNWLANLYDQGING-ILADEMGL 775
E G+L+ + GE + + P L L +Q + L WL Q G ILAD+MGL
Sbjct: 541 EAIGQLHRSLESCPGETVVAEDPAGLKVPLLLHQKQALAWLLWRESQKPQGGILADDMGL 600
Query: 776 GKTVQSISVLAHLADRYN----------IW-----------GPFIVVTPASTLHNWVNEI 814
GKT+ I+++ ++ W +++ PAS +H+W NE+
Sbjct: 601 GKTLTMIALILTQKNQEKKEEKEKSTALTWLSKDDSCDFTSHGTLIICPASLIHHWKNEV 660
Query: 815 SRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSD-------- 866
+ V K+ Y + +R + + + + +++T+Y +V +
Sbjct: 661 EKRVNSNKLRVYLYHGPNRDSRARVL----------STYDIVITTYSLVAKEIPTNKQEA 710
Query: 867 ------------ASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQ 914
++ L ++ W +ILDEA +K+ + + R +TGTPIQ
Sbjct: 711 EIPGANLNVEGTSTPLLRIAWARIILDEAHNVKNPRVQTSIAVCKLQACARWAVTGTPIQ 770
Query: 915 NNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLR 974
NN+ ++++LL F+ S F DEF+ W S+ +++ ++ E RL ++ K +LR
Sbjct: 771 NNLLDMYSLLKFLRCSPF---DEFNLWRSQ-VDNGSKKGGE-------RLSILTKSLLLR 819
Query: 975 RIKKNVQS 982
R K + S
Sbjct: 820 RTKDQLDS 827
>7301343 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1311
Score = 86.7 bits (213), Expect = 3e-16
Identities = 103/452 (22%), Positives = 189/452 (41%), Gaps = 77/452 (17%)
Query: 640 KIKTNELEGTMTDDSLTSMSNNKNKVV-----DLTKTAASKTNVESIDFATEDDEKLRLM 694
K + E +G DD + + K++ DLT A+K EDD + R+
Sbjct: 361 KTSSGESDGDGDDDKQKNKRKHIRKIIKTKDLDLTTKEAAKE---------EDDRRKRIE 411
Query: 695 AAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTLKEYQLKGL 754
Q N + K + + + L+F + + +D K L LK +Q+ G+
Sbjct: 412 DRQKLYNRIFV------KSESVEINELVLDFDEESKKALLQVD--KGLLKKLKPHQVAGV 463
Query: 755 NWLANLYDQ---------GINGILADEMGLGKTVQSISVLAHLADRYNIWGP--FIVVTP 803
++ + + G ILA MGLGKT+Q +++ L G ++++P
Sbjct: 464 KFMWDACFETLKESQEKPGSGCILAHCMGLGKTLQVVTLSHTLLVNTRRTGVDRVLIISP 523
Query: 804 ASTLHNWVNEISRFVPQFKILPYWGNANDRKT--LRKFWDRKHLRYGRDAPFH---VMVT 858
ST++NW E + ++ + N ND + + ++ D+ + + F+ V +
Sbjct: 524 LSTVNNWAREFTSWMK-------FANRNDIEVYDISRYKDKPTRIFKLNEWFNEGGVCIL 576
Query: 859 SYQM----VVSDASYLQKMKWQYM------------ILDEAQAIKSSQSSRWKTLLSFHC 902
Y M A L+K + + + + DE +K+ ++S K +
Sbjct: 577 GYDMYRILANEKAKGLRKKQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRT 636
Query: 903 RNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIES-----HAESNTELN 957
+ R++LTGTP+QNN++E + ++ F+ P+L ++ E+ + F I + E + L
Sbjct: 637 KRRIVLTGTPLQNNLREYYCMIQFVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLM 696
Query: 958 QEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGY-- 1015
+ + LH +L+ + RR + L K E V L+ Q KLY GY
Sbjct: 697 KHRSHILHKLLEGCIQRRDYSVLAPYLPPKHEYVVYTTLSELQQKLY---------GYYM 747
Query: 1016 DAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP 1047
+G D V +L + R++ HP
Sbjct: 748 TTHREQSGGDVVGKGARLFQDFQDLRRIWTHP 779
Score = 85.5 bits (210), Expect = 6e-16
Identities = 41/109 (37%), Positives = 70/109 (63%), Gaps = 2/109 (1%)
Query: 1362 HIRLDGSSKLDDRRDLVHDWQTKPDIF--IFLLSTRAGGLGINLTAADTVIFYDSDWNPT 1419
+ RLDGS ++ R + + ++ +FL+STRAGGLGINL AA+ V+ +D WNP+
Sbjct: 963 YFRLDGSCSVEQREAMCKQFNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPS 1022
Query: 1420 IDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVME 1468
D+Q++ R +R GQ + +YRL+ GT+E+++ +R K+ + V++
Sbjct: 1023 HDTQSIFRVYRFGQIKPCYIYRLIAMGTMEQKVYERQVAKQATAKRVID 1071
>Hs20532976 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 293
Score = 82.0 bits (201), Expect = 6e-15
Identities = 45/147 (30%), Positives = 77/147 (51%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ L++ M+ E + + +IR+DGS +R LV+ +Q PD + +LS +A
Sbjct: 88 KFLVFAHHLSMLQACTEAVIENKTRYIRIDGSVSSSERIHLVNQFQKDPDTRVAILSIQA 147
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
G G+ TAA V+F + W+P QA DRAHR+GQ V ++ L+ GT++ M
Sbjct: 148 AGQGLTFTAASHVVFAELYWDPGHIKQAEDRAHRIGQCSSVNIHYLIANGTLDTLMWGML 207
Query: 1457 KQKEHVQQVVMEGKAKENKQKIIEVEK 1483
+K V + G+ ++ + + + EK
Sbjct: 208 NRKAQVTGSTLNGRKEKIQAEEGDKEK 234
>7298962 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 965
Score = 82.0 bits (201), Expect = 6e-15
Identities = 81/345 (23%), Positives = 154/345 (44%), Gaps = 46/345 (13%)
Query: 687 DDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQPKMLACTL 746
++ K R + + LK TQ+ R + +E + + + + E + P+ C +
Sbjct: 273 EETKNRKREEKKKALTLKWTQEFNRVYCKEIRKISMFDDEEESGKEEEQYEPPEKRTCHV 332
Query: 747 KEYQLKGLNWLANL-YDQGINGILADEMG--LGKTVQ-----SISVLAHLADRYNIWGPF 798
K ++ L + D G ++ DE L KT + S HL++
Sbjct: 333 KTKKINQFRILDDDDNDAGDKAVVEDEQKDLLAKTPEPEVFSSDEEEEHLSNGRYPSANT 392
Query: 799 IVVTPASTLHNWVNEISRFVPQ--FKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVM 856
+VV P S + W +E++ V Q ++L + G + F + ++
Sbjct: 393 LVVCPMSVMCQWAHEVASKVAQNAIRVLTFHGPNRHEIGIEAF-----------RSYDLV 441
Query: 857 VTSYQMVVSD------ASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTG 910
+TSY +VV++ S L + W +ILDEA I++S+++ ++ LTG
Sbjct: 442 ITSYNLVVNELKRYGNTSPLFAVYWNRVILDEAHIIRNSKTNCCNSVCQLRAHCHWALTG 501
Query: 911 TPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKP 970
TP+QN +++ALL F+ F ++ ++ + H RRL+ ++KP
Sbjct: 502 TPVQNRGVDVFALLRFVNVPNFQDLQQWKKNLNESMLGH------------RRLNFIIKP 549
Query: 971 FMLRRIKKNVQSELGD-----KIEIDVLC-DLTFRQAKLYQVLKS 1009
MLRR K+ +Q+ GD ++I+++C L+ + +YQ+L +
Sbjct: 550 LMLRRTKQKLQAS-GDMPALPSLKIELICVQLSKTEMAVYQILSA 593
Score = 76.3 bits (186), Expect = 4e-13
Identities = 36/137 (26%), Positives = 73/137 (53%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
++++ Q + ++ + L + + +G +R ++ D+ + + LLS A
Sbjct: 809 KIIVTSQWVSYLAIVRKRLQDLSWETLDFNGQLTAKEREIVLRDFNANNEKRVLLLSLTA 868
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GG+G+NL A+ ++ D WNP ++ QA DR +R GQT+ +YR + + T+E+R++
Sbjct: 869 GGVGLNLNVANHMLIVDLHWNPQLERQAQDRIYRYGQTKPTFIYRYMCQDTVEQRIKSLQ 928
Query: 1457 KQKEHVQQVVMEGKAKE 1473
K + +VV+ + E
Sbjct: 929 DCKLEIAKVVLPEEGGE 945
>At3g16600 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 638
Score = 80.9 bits (198), Expect = 1e-14
Identities = 41/90 (45%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 1391 LLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEE 1450
L+S +AG LG+N+ AA VI D WNPT + QA+DRAHR+GQTR VTV R+ I+ T+EE
Sbjct: 511 LMSLKAGNLGLNMVAASHVILLDLWWNPTTEDQAIDRAHRIGQTRAVTVTRIAIKNTVEE 570
Query: 1451 RMRDRAKQKEHVQQVVMEGKAKENKQKIIE 1480
R+ ++K + +V ++N QK +
Sbjct: 571 RILTLHERK---RNIVASALGEKNWQKFCD 597
Score = 76.6 bits (187), Expect = 3e-13
Identities = 87/390 (22%), Positives = 155/390 (39%), Gaps = 77/390 (19%)
Query: 703 LKETQDKARKFDEE-DEEDGELNFQNPTSLGEITIDQPK--------MLACTLKEYQLKG 753
+ +T D + DEE EE +N + + QPK +L L +Q
Sbjct: 1 MDDTMDMSSGSDEEVQEEKTTVNERVIYQAALQDLKQPKTEKDLPPGVLTVPLMRHQKIA 60
Query: 754 LNWLANLYDQG---INGILADEMGLGKTVQSISVLA---------HLADRYNIWGPFIVV 801
LNW+ + + GILAD+ GLGKT+ +IS++ + G ++V
Sbjct: 61 LNWMRKKEKRSRHCLGGILADDQGLGKTISTISLILLQKLKSQSKQRKRKGQNSGGTLIV 120
Query: 802 TPASTLHNWVNEISRFVP---QFKILPYWGNANDRK-TLRKFWDRKHLRYG---RDAPFH 854
PAS + W E+ V + +L + G+ + T +D Y + P +
Sbjct: 121 CPASVVKQWAREVKEKVSDEHKLSVLVHHGSHRTKDPTEIAIYDVVMTTYAIVTNEVPQN 180
Query: 855 VMVTSYQ------------MVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHC 902
M+ Y ++ L +++W ++LDEA IK+ ++ K S
Sbjct: 181 PMLNRYDSMRGRESLDGSSLIQPHVGALGRVRWLRVVLDEAHTIKNHRTLIAKACFSLRA 240
Query: 903 RNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQL- 961
+ R LTGTPI+N + +L++ F+ + + F H ++++ L
Sbjct: 241 KRRWCLTGTPIKNKVDDLYSYFRFLRYHPYAMCNSF----------HQRIKAPIDKKPLH 290
Query: 962 --RRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIE 1019
++L +L+ MLRR K + Y+ K +++ + E
Sbjct: 291 GYKKLQAILRGIMLRRTK----------------------EWSFYR--KLELNSRWKFEE 326
Query: 1020 NAAGNDDVTSDQKLVNLVMEFRKVCNHPDL 1049
AA L+ +++ R+ CNHP L
Sbjct: 327 YAADGTLHEHMAYLLVMLLRLRQACNHPQL 356
>ECU06g0820 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 556
Score = 79.3 bits (194), Expect = 4e-14
Identities = 43/126 (34%), Positives = 68/126 (53%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ +++ T+MM+ +E + R IR+DGS R LV +Q ++ + LLS A
Sbjct: 396 KFVVFCHHTEMMESLEGFFAERNVPMIRIDGSVPSTSRHLLVKKFQENEEVMVALLSITA 455
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
G+ LTA V+F + WNP + QA DR HR+GQ V + L+ +GTI+E + +
Sbjct: 456 CSTGLTLTAGRAVVFAELYWNPGVLLQAEDRIHRIGQKSSVDIIYLVAKGTIDEYVWPKL 515
Query: 1457 KQKEHV 1462
K +V
Sbjct: 516 LSKLNV 521
Score = 73.6 bits (179), Expect = 2e-12
Identities = 72/268 (26%), Positives = 116/268 (42%), Gaps = 52/268 (19%)
Query: 746 LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPAS 805
L +Q +G+ N +G I+AD+MGLGKT+Q+++V A Y P +++ PAS
Sbjct: 124 LLPFQREGVEHALN---RGGRMIVADDMGLGKTIQALAV----AYYYRAEWPLVIIAPAS 176
Query: 806 TLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVS 865
L +W + RF+ ++ +R D + V SY++ S
Sbjct: 177 LLEDWADACRRFLGMEAMV--------------------MRRKEDFGQEIGVVSYEVASS 216
Query: 866 DASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSF--HCRNRLLLTGTPIQNNMQELWAL 923
A+ L +I DE +KS Q+ R K ++ LLL+GTP + EL+ +
Sbjct: 217 HANVL-ACGAGVVIADECHYLKSLQTKRTKAIVPLLQKVSRALLLSGTPAVSRPLELYPI 275
Query: 924 LHFIMPSLFDSHDEF----------SDWFSKDIESHAESNTELNQEQLRRLHMVLKPF-M 972
+ + ++F E+ W+ S+AE LH VL+ F M
Sbjct: 276 ISAVDRTIFPRFAEYGARYCNGRKVGQWYDYKGCSNAE-----------ELHYVLRKFLM 324
Query: 973 LRRIKKNVQSELGDKIEIDVLCDLTFRQ 1000
+RR K V +L K V+ + T RQ
Sbjct: 325 IRRTKDEVLGQLPPKFRRQVVLECTGRQ 352
>CE17314 [K] KOG1015 Transcription regulator XNP/ATRX DEAD-box superfamily
Length = 1359
Score = 79.3 bits (194), Expect = 4e-14
Identities = 43/110 (39%), Positives = 67/110 (60%), Gaps = 4/110 (3%)
Query: 1362 HIRLDGSSKLDDRRDLVHDWQTKP---DIFIFLLSTRAGGLGINLTAADTVIFYDSDWNP 1418
++ +DGS + +RD V P + L+STRAG LG N+ AA+ VI +D+ WNP
Sbjct: 1016 YMTIDGSVQ-SGKRDAVQTSFNDPLNLRARLMLISTRAGSLGTNMVAANRVIIFDACWNP 1074
Query: 1419 TIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVME 1468
+ D+Q++ R +R GQT+ V +YR + +GT+EER+ R KE V++
Sbjct: 1075 SHDTQSLFRVYRFGQTKPVYIYRFIAQGTMEERIYKRQVTKESTSMRVVD 1124
Score = 75.1 bits (183), Expect = 8e-13
Identities = 90/393 (22%), Positives = 147/393 (36%), Gaps = 81/393 (20%)
Query: 746 LKEYQLKGLNW--------LANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGP 797
LK +Q G+ + L L +G GILA MGLGKT+Q I+ L + I
Sbjct: 463 LKPHQAHGIQFMYDCAFESLDRLDTEGSGGILAHCMGLGKTLQVITFLHTVLMHEKIGEK 522
Query: 798 ---FIVVTPASTLHNWVNEISRFVPQ---------FKILPYWGNANDRKTLRKFWDRKHL 845
+VV P + + NW E +++ L + DR+ K W
Sbjct: 523 CKRVLVVVPKNVIINWFKEFQKWLVDNDEELDTIDVNELDSYKTIEDRRRALKAW----- 577
Query: 846 RYGRDAPFHVMVTSYQM----VVSD---------------------ASYLQKMKWQYMIL 880
+ P VM+ Y + V D YLQ ++
Sbjct: 578 -HSSKTP-SVMIIGYDLFRILTVEDDPKKKKPKNRNRRLEKAKEDFRKYLQNPGPDMVVC 635
Query: 881 DEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSD 940
DEA +K+ S+ K ++ + R+ LTGTP+QNN+ E +++F+ P L + EF++
Sbjct: 636 DEAHKLKNDDSALSKCMVKILTKRRICLTGTPLQNNLMEYHCMVNFVKPGLLGTKTEFAN 695
Query: 941 WFSKDIESHAESNTELNQEQL--RRLHMV---LKPFMLRRIKKNVQSELGDKIEIDVLCD 995
F I + + RR H++ LK + R+ + + + K E +
Sbjct: 696 RFVNIINRGRTKDASPLEVSFMKRRCHVLYDHLKKCVDRKDYRVLTEAIPPKQEYVINVR 755
Query: 996 LTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLVMEFRKVCNHP-------- 1047
T RQ LY + + G D ++L+ F ++ HP
Sbjct: 756 QTERQCALYNAFLNDIVG------------DSGLSKRLLPDYHMFSRIWTHPYQLVLHEQ 803
Query: 1048 ----DLFERADVMSPFSFVSFGESASLSREGDF 1076
+ R D F+ G+ + EG F
Sbjct: 804 RMERERVMREDAEEEADFIDDGDGSESESEGSF 836
>SPAC13G6.01c [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 104
Score = 79.0 bits (193), Expect = 5e-14
Identities = 36/98 (36%), Positives = 63/98 (63%)
Query: 1385 PDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLI 1444
PD+ + ++S +AGG+G+NLT A+ V D W+ ++++QA+DR HRLGQ + V V R ++
Sbjct: 2 PDVNVLIISLKAGGVGLNLTCANHVFIMDPWWSWSVEAQAIDRIHRLGQEKPVFVTRYIV 61
Query: 1445 RGTIEERMRDRAKQKEHVQQVVMEGKAKENKQKIIEVE 1482
R T+EERM ++K + + + K+ Q I +++
Sbjct: 62 RDTVEERMLKIQERKNFITGTLGMSEGKQQVQSIEDIK 99
>Hs21071060 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 954
Score = 79.0 bits (193), Expect = 5e-14
Identities = 41/144 (28%), Positives = 79/144 (54%), Gaps = 2/144 (1%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+ L++ ++D + + L + HIR+DGS+ +R DL +Q + +LS A
Sbjct: 727 KFLVFAHHKVVLDAITQELERKHVQHIRIDGSTSSAEREDLCQQFQLSERHAVAVLSITA 786
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
+G+ ++AD V+F + WNP + QA DR HR+GQT V ++ L+ +GT ++ +
Sbjct: 787 ANMGLTFSSADLVVFAELFWNPGVLIQAEDRVHRIGQTSSVGIHYLVAKGTADDYLWPLI 846
Query: 1457 KQKEHVQQVVMEGKAKENKQKIIE 1480
++K ++ + G ++ N ++ E
Sbjct: 847 QEK--IKVLAEAGLSETNFSEMTE 868
>Hs21071052 [KL] KOG1001 Helicase-like transcription factor HLTF/DNA helicase
RAD5 DEAD-box superfamily
Length = 1009
Score = 79.0 bits (193), Expect = 5e-14
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 1339 LIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKP--DIFIFLLSTRA 1396
L+ Q T + L+E L + RLDGS R + + +Q I LLS +A
Sbjct: 855 LVVSQFTTFLSLIEIPLKASGFVFTRLDGSMAQKKRVESIQCFQNTEAGSPTIMLLSLKA 914
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERM 1452
GG+G+NL+AA V D WNP + Q DR HRLGQ ++V + + +++ ++EE M
Sbjct: 915 GGVGLNLSAASRVFLMDPAWNPAAEDQCFDRCHRLGQKQEVIITKFIVKDSVEENM 970
Score = 78.2 bits (191), Expect = 9e-14
Identities = 68/269 (25%), Positives = 123/269 (45%), Gaps = 36/269 (13%)
Query: 799 IVVTPASTLHNWVNEISRFVPQ---FKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHV 855
+++ P S L NW+++ + + Y+G R+ L +D +
Sbjct: 479 LIICPLSVLSNWIDQFGQHIKSDVHLNFYVYYGPDRIREPA--------LLSKQD----I 526
Query: 856 MVTSYQMVVSDA-----SYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTG 910
++T+Y ++ D S L ++W +ILDE AI++ + + K +L R +LTG
Sbjct: 527 VLTTYNILTHDYGTKGDSPLHSIRWLRVILDEGHAIRNPNAQQTKAVLDLESERRWVLTG 586
Query: 911 TPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKP 970
TPIQN++++LW+LL F+ F +W+ + I+ T ++ LRRL ++K
Sbjct: 587 TPIQNSLKDLWSLLSFLKLKPFIDR----EWWHRTIQRPV---TMGDEGGLRRLQSLIKN 639
Query: 971 FMLRR-----IKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGND 1025
LRR IK EL ++ L+ + K+YQ +K++ G I
Sbjct: 640 ITLRRTKTSKIKGKPVLELPERKVFIQHITLSDEERKIYQSVKNE---GRATIGRYFNEG 696
Query: 1026 DVTSD-QKLVNLVMEFRKVCNHPDLFERA 1053
V + ++ L++ R++C H L A
Sbjct: 697 TVLAHYADVLGLLLRLRQICCHTYLLTNA 725
>CE11450 [KL] KOG4439 RNA polymerase II transcription termination factor
TTF2/lodestar DEAD-box superfamily
Length = 518
Score = 78.2 bits (191), Expect = 9e-14
Identities = 40/115 (34%), Positives = 67/115 (57%), Gaps = 1/115 (0%)
Query: 1365 LDGSSKLDDRRDLVHDW-QTKPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQ 1423
+ G + DR++ V + Q K LLS AGG+G+NL + +I D WNP ++ Q
Sbjct: 385 ITGEVAIKDRQERVDSFNQEKGGAQDMLLSLTAGGVGLNLIGGNHLIMVDLHWNPALEQQ 444
Query: 1424 AMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGKAKENKQKI 1478
A DR +R+GQ ++V ++RL+++ TIE+R+ ++K + V+EG A K+
Sbjct: 445 ACDRIYRMGQKKEVHIHRLIVKETIEQRVMSLQEKKLALAASVLEGSATRGMNKL 499
Score = 68.9 bits (167), Expect = 6e-11
Identities = 59/193 (30%), Positives = 90/193 (46%), Gaps = 14/193 (7%)
Query: 737 DQPKMLACTLKEYQLKGLNWLANLYDQGING-ILADEMGLGKTVQSISVLAH--LADRYN 793
+ P L +Q GL WL Q +G IL +MGLGKT+ IS++ H A +
Sbjct: 135 ETPDGFLVDLMPHQKAGLCWLLWRESQPHSGGILGGDMGLGKTLSMISLIVHQKAARKTR 194
Query: 794 IWGPFIVVTPASTLHNWVNEISRFVPQ--FKILPYWGNANDRKTLRKFWDRKHLRYGRDA 851
+ P S +H+W EI+R + Q +L Y GN R+ + +KH+ D
Sbjct: 195 KDAGDDAIAPESLVHHWEAEIARRLKQDLLSVLVYHGN---RRHINPKDLKKHIELDYDL 251
Query: 852 PF-HVMVTSYQMVV-----SDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNR 905
H + + V ++S L ++ W Y+ILDEA IK+ + + +R
Sbjct: 252 EDEHNPCSKLRPRVCPKADKNSSPLARIAWSYVILDEAHIIKNRNAQCSEAACKISAFSR 311
Query: 906 LLLTGTPIQNNMQ 918
L+GTPI NNM+
Sbjct: 312 WCLSGTPIHNNMR 324
>At5g07810 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 1178
Score = 75.5 bits (184), Expect = 6e-13
Identities = 39/134 (29%), Positives = 74/134 (55%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+++++ K++D ++E++ + +R+DG++ DR+ V +Q ++ I ++ A
Sbjct: 544 KMVVFAHHHKVLDGIQEFICDKGIGFVRIDGTTLPRDRQLAVQSFQFSSEVKIAIIGVEA 603
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
GG+G++ +AA V+F + P++ QA DRAHR GQT V VY + T++E
Sbjct: 604 GGVGLDFSAAQNVVFLELPKTPSLLLQAEDRAHRRGQTSAVNVYIFCAKDTMDESNWQNL 663
Query: 1457 KQKEHVQQVVMEGK 1470
+K H +GK
Sbjct: 664 NKKLHRISSTTDGK 677
Score = 57.8 bits (138), Expect = 1e-07
Identities = 55/187 (29%), Positives = 88/187 (46%), Gaps = 37/187 (19%)
Query: 739 PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPF 798
P+ L L +QL GL + +G +ADEMGLGKT+Q+I++ A + G
Sbjct: 197 PRKLVNALLPFQLDGLRFGLR---RGGRCFIADEMGLGKTLQAIAI----AGCFISEGSI 249
Query: 799 IVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYG-RDAPFH--- 854
+VV PA W E+ R++P LP HL +G +D P +
Sbjct: 250 LVVCPAVLRFTWAEELERWLP--SCLP---------------SDVHLVFGHQDNPAYLPR 292
Query: 855 ---VMVTSYQMVVSDASYLQKMKWQYMILDEAQAI----KSSQSSRWKTLLSF--HCRNR 905
V+V SY+M+ + + + +W +I+DE+ + K S KT+L ++
Sbjct: 293 WPKVVVISYKMLQHLRTTMLEREWALLIVDESHHLRCSKKKSDPPEIKTVLDVAEKVKHI 352
Query: 906 LLLTGTP 912
+LL+GTP
Sbjct: 353 ILLSGTP 359
>CE27689 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 689
Score = 74.3 bits (181), Expect = 1e-12
Identities = 44/123 (35%), Positives = 69/123 (55%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+VLI+ ++D ++ + R+ IR+DG + R L +QT +I + +LS A
Sbjct: 494 KVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIRVAVLSITA 553
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
G+GI LTAA V+F + +NP QA DRAHR+GQ V V L+ + T ++ M +
Sbjct: 554 AGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMV 613
Query: 1457 KQK 1459
+QK
Sbjct: 614 QQK 616
Score = 72.4 bits (176), Expect = 5e-12
Identities = 62/224 (27%), Positives = 106/224 (46%), Gaps = 22/224 (9%)
Query: 768 ILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYW 827
+LADEMGLGK+VQ++++ + Y P ++V PAS W +++ F P +
Sbjct: 218 LLADEMGLGKSVQALTIARY----YKADWPLLIVCPASVKGAWKKQLNTFFPIIHRIFIV 273
Query: 828 GNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIK 887
++D V + SY+ +V L+K K++ +I DE+ +K
Sbjct: 274 DKSSDPLP------------DVCTSNTVAIMSYEQMVLKHDILKKEKYRTIIFDESHMLK 321
Query: 888 SSQSSRWK--TLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWF--S 943
++ R K T LS + +LL+GTP + EL+ + I LF + EF+ +
Sbjct: 322 DGKARRTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCDG 381
Query: 944 KDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDK 987
K E+ N E+L + + K M+RR+K +V +L +K
Sbjct: 382 KQGRFCFEAKGCTNSEELAAI--MFKRLMIRRLKADVLKDLPEK 423
>CE27688 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 687
Score = 74.3 bits (181), Expect = 1e-12
Identities = 44/123 (35%), Positives = 69/123 (55%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+VLI+ ++D ++ + R+ IR+DG + R L +QT +I + +LS A
Sbjct: 492 KVLIFAHHQIVLDTIQVEVNKRKLGSIRIDGKTPSHRRTALCDSFQTDDNIRVAVLSITA 551
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
G+GI LTAA V+F + +NP QA DRAHR+GQ V V L+ + T ++ M +
Sbjct: 552 AGVGITLTAASVVVFAEIHFNPGYLVQAEDRAHRVGQKDSVFVQYLIAKKTADDVMWNMV 611
Query: 1457 KQK 1459
+QK
Sbjct: 612 QQK 614
Score = 72.4 bits (176), Expect = 5e-12
Identities = 62/224 (27%), Positives = 106/224 (46%), Gaps = 22/224 (9%)
Query: 768 ILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYW 827
+LADEMGLGK+VQ++++ + Y P ++V PAS W +++ F P +
Sbjct: 216 LLADEMGLGKSVQALTIARY----YKADWPLLIVCPASVKGAWKKQLNTFFPIIHRIFIV 271
Query: 828 GNANDRKTLRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIK 887
++D V + SY+ +V L+K K++ +I DE+ +K
Sbjct: 272 DKSSDPLP------------DVCTSNTVAIMSYEQMVLKHDILKKEKYRTIIFDESHMLK 319
Query: 888 SSQSSRWK--TLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWF--S 943
++ R K T LS + +LL+GTP + EL+ + I LF + EF+ +
Sbjct: 320 DGKARRTKVATDLSKVALHVILLSGTPALSRPSELFTQIRLIDHKLFTNFHEFAIRYCDG 379
Query: 944 KDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDK 987
K E+ N E+L + + K M+RR+K +V +L +K
Sbjct: 380 KQGRFCFEAKGCTNSEELAAI--MFKRLMIRRLKADVLKDLPEK 421
>At3g24340 [L] KOG0390 DNA repair protein SNF2 family
Length = 1132
Score = 72.4 bits (176), Expect = 5e-12
Identities = 44/146 (30%), Positives = 79/146 (53%), Gaps = 8/146 (5%)
Query: 1337 RVLIYFQMTKMMDL-MEEYLTYRQYTH----IRLDGSSKLDDRRDLVHDWQTKPDIF--I 1389
+VL+Y Q + L ME+ + +T + + G + DR+ ++ ++ KPD +
Sbjct: 945 KVLVYSQYIDTLKLIMEQLIAECDWTEGEQILLMHGKVEQRDRQHMIDNFN-KPDSGSKV 1003
Query: 1390 FLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIE 1449
L ST+A GI+L A V+ D WNP+++SQA+ RA R+GQ R V +Y L+++ T E
Sbjct: 1004 LLASTKACSEGISLVGASRVVILDVVWNPSVESQAISRAFRIGQKRAVFIYHLMVKDTSE 1063
Query: 1450 ERMRDRAKQKEHVQQVVMEGKAKENK 1475
+ +K + ++V +++K
Sbjct: 1064 WNKYCKQSEKHRISELVFSSTNEKDK 1089
>At1g05480 [L] KOG0390 DNA repair protein SNF2 family
Length = 588
Score = 72.0 bits (175), Expect = 7e-12
Identities = 47/156 (30%), Positives = 81/156 (51%), Gaps = 8/156 (5%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTH-----IRLDGSSKLDDRRDLVHDWQT-KPDIFIF 1390
+VL++ Q + L+ ++L R + + + G + R+ L++++ K +F
Sbjct: 395 KVLVFSQYIDPLKLIMKHLVSRFKWNPGEEVLYMHGKLEQKQRQTLINEFNDPKSKAKVF 454
Query: 1391 LLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEE 1450
L ST+A GI+L A VI D WNP ++ QA+ RA+R+GQ R V Y L+ +GT E
Sbjct: 455 LASTKACSEGISLVGASRVILLDVVWNPAVERQAISRAYRIGQKRIVYTYHLVAKGTPEG 514
Query: 1451 RMRDRAKQKEHVQQVVM--EGKAKENKQKIIEVEKE 1484
+ QK+ + ++V + + K+KI E E
Sbjct: 515 PKYCKQAQKDRISELVFACSSRHDKGKEKIAEAVTE 550
Score = 51.6 bits (122), Expect = 9e-06
Identities = 29/97 (29%), Positives = 45/97 (45%), Gaps = 2/97 (2%)
Query: 878 MILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDE 937
++LDEA ++ +S WKTL + R+LL+GTP QNN EL +L P +
Sbjct: 186 LVLDEAHTPRNQRSCIWKTLSKVETQKRILLSGTPFQNNFLELCNVLGLARPKYLERLTS 245
Query: 938 FSDWFSKDIESHAESN--TELNQEQLRRLHMVLKPFM 972
+ + N E+N + L V+ PF+
Sbjct: 246 TLKKSGMTVTKRGKKNLGNEINNRGIEELKAVMLPFV 282
>SPAC144.05 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1375
Score = 68.9 bits (167), Expect = 6e-11
Identities = 69/312 (22%), Positives = 137/312 (43%), Gaps = 43/312 (13%)
Query: 767 GILADEMGLGKTVQSISVLAH----------------LADRYNIWGPFIVVTPASTLHNW 810
GILADEMG+GKT++ + ++ H + +++TP++ L W
Sbjct: 286 GILADEMGMGKTLEVLGLVLHHQLPISLTDTCTFDQVVGKNVKYSKATLIITPSTILDQW 345
Query: 811 VNEISRFVPQFKILPYWG--NANDRKTLRKFWDRKHLRYG-RDAPFHVMVTSY------- 860
++EI VP K+ Y G +N K+ + F D + D F ++ T
Sbjct: 346 LSEIDLHVPSLKVFHYQGIRKSNGLKSAKIFLDCDIVVTSYSDLRFELLYTESHSRTLRH 405
Query: 861 -QMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLLTGTPIQNNMQE 919
+ VS S L + W + +DEAQ +++SQS+ + + N ++GTP+++ + +
Sbjct: 406 EKRHVSPKSPLIDVCWWRICVDEAQMVETSQSNVAQMIYRIPRVNCWTVSGTPVRSEVDD 465
Query: 920 LWALLHFIMPSLFDSHDEFSDWFSKDIESHAESNTELNQEQLRRLHMVLKPFMLRRIKKN 979
L+ LL + S + + W + ++++R + + R K++
Sbjct: 466 LFGLLFLLRYSPMYLYKK-QAWMQ-----------IIEKKRVREFCDLFGSLVCRHSKQD 513
Query: 980 VQSE--LGDKIEIDVLCDLTFRQAKLYQVLKSQVSGGYDAIENAAGNDDVTSDQKLVNLV 1037
V+ E L + I + L+ + YQ L S+ + ++ N D+ ++ + +
Sbjct: 514 VEEELKLPPQHRICMTTRLSVVEETNYQDLLSEAAKSLHFFKDR--NLDLCDEESMRRWL 571
Query: 1038 MEFRKVCNHPDL 1049
+ R+ C HP +
Sbjct: 572 VRLRQACCHPQV 583
Score = 53.9 bits (128), Expect = 2e-06
Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+V+++ Q ++D++ + IR DG SK + ++ + + + L R+
Sbjct: 1206 KVVVFSQWLDVLDVLHKSFEANGIVFIRFDGKSK----NTCLKRFKEERSLQVLTLHARS 1261
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIE 1449
G+ LT A V + N I+ QA+ R HR+GQTR VY ++ T+E
Sbjct: 1262 QSSGLTLTNATHVFMCEPLLNSGIEMQAISRVHRIGQTRPTFVYYYIVEDTVE 1314
>Hs22048060 [K] KOG0384 Chromodomain-helicase DNA-binding protein
Length = 122
Score = 67.0 bits (162), Expect = 2e-10
Identities = 29/71 (40%), Positives = 48/71 (66%)
Query: 768 ILADEMGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYW 827
ILADEMGLGKT+Q IS L++L + + ++GPF++V P ST+ +W E + + ++ Y
Sbjct: 33 ILADEMGLGKTIQVISFLSYLFNVHQLYGPFLIVVPLSTMTSWQREFEAWDSKMNVVVYI 92
Query: 828 GNANDRKTLRK 838
G+ N R ++ +
Sbjct: 93 GDINSRNSVHR 103
>At3g42670 [L] KOG0390 DNA repair protein SNF2 family
Length = 1256
Score = 66.6 bits (161), Expect = 3e-10
Identities = 38/86 (44%), Positives = 50/86 (57%)
Query: 1389 IFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTI 1448
+ L S A GI+LTAA VI DS+WNP+ QA+ RA R GQ + V VY+LL RGT+
Sbjct: 1132 VLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTL 1191
Query: 1449 EERMRDRAKQKEHVQQVVMEGKAKEN 1474
EE R KE V ++ + E+
Sbjct: 1192 EEDKYRRTTWKEWVSSMIFSEEFVED 1217
>At5g20420 [L] KOG0390 DNA repair protein SNF2 family
Length = 1261
Score = 65.1 bits (157), Expect = 8e-10
Identities = 37/78 (47%), Positives = 47/78 (59%)
Query: 1389 IFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTI 1448
+ L S A GI+LTAA VI DS+WNP+ QA+ RA R GQ + V VY+LL RGT+
Sbjct: 1138 VLLASITACAEGISLTAASRVIMLDSEWNPSKTKQAIARAFRPGQQKVVYVYQLLSRGTL 1197
Query: 1449 EERMRDRAKQKEHVQQVV 1466
EE R KE V ++
Sbjct: 1198 EEDKYRRTTWKEWVSCMI 1215
>At2g40770 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1648
Score = 60.8 bits (146), Expect = 2e-08
Identities = 37/126 (29%), Positives = 62/126 (48%), Gaps = 13/126 (10%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGS------------SKLDDRRDLVHDWQTK 1384
+VL++ ++D++E T IR+ G S+ + ++ H + K
Sbjct: 1435 KVLVFSSWNDVLDVLEHAFAANSITCIRMKGGRKSQTAISKFKGSEKETQKTNSHQKEEK 1494
Query: 1385 PDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLI 1444
I + LL + G G+NL A VI + NP ++QA+ R HR+GQ + V+R L+
Sbjct: 1495 -SIQVLLLLVQHGANGLNLLEAQHVILVEPLLNPAAEAQAVGRVHRIGQEKPTLVHRFLV 1553
Query: 1445 RGTIEE 1450
GT+EE
Sbjct: 1554 SGTVEE 1559
Score = 58.5 bits (140), Expect = 8e-08
Identities = 67/296 (22%), Positives = 122/296 (40%), Gaps = 54/296 (18%)
Query: 796 GPFIVVTPASTLHNWVNEISRFVPQFKILP--YWGNANDRKTLRKFWDRKHLRYGRDAPF 853
G ++V PA L W +EI+R ++ Y G N + D L
Sbjct: 484 GATLIVCPAPILPQWHSEITRHTRLGSLITCIYEGVRNASLSEEPMIDITELLNA----- 538
Query: 854 HVMVTSYQMVVSDASY------------------------LQKMKWQYMILDEAQAIKSS 889
+++T+Y ++ D ++ L ++ W + LDEAQ ++S+
Sbjct: 539 DIVLTTYDVLKEDLTHDFDRHDGDRHCLRFQKRYPVIPTPLTRIFWWRICLDEAQMVESN 598
Query: 890 QSSRWKTLLSFHCRNRLLLTGTPIQNNMQELWALLHFIMPSLFDSHDEFSDWFSKDIESH 949
++ + L + ++R +TGTPIQ + +L+ LL F+ + FD S W+ + I
Sbjct: 599 AAAATEMALRLYTKHRWCITGTPIQRKLDDLFGLLKFLKANPFD----VSRWWIEVIRDP 654
Query: 950 AESNTELNQEQLRRLHMVLKPFMLRRIKKNVQSELGDKIEIDVLCDLTFRQAKLYQVLKS 1009
E + + + H K M R K +V EL + + + L F + + +
Sbjct: 655 YERR---DTKAMEFTHKFFKQVMWRSSKVHVADELQLPPQEECVSWLKFSAIEEHFYSRQ 711
Query: 1010 Q---VSGGYDAIE-----------NAAGNDDVTSDQ--KLVNLVMEFRKVCNHPDL 1049
VS + IE ++ N VT + KL+N +++ R+ C HP +
Sbjct: 712 HDTCVSYAREVIETLKRDILKRGHTSSDNPLVTHAEAAKLLNSLLKLRQACCHPQV 767
>Hs22054523 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1669
Score = 59.7 bits (143), Expect = 3e-08
Identities = 35/114 (30%), Positives = 60/114 (51%), Gaps = 3/114 (2%)
Query: 1347 MMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGGLGINLTAA 1406
++D++ + LT ++ S++ ++ + ++ P I I LL G G+ + A
Sbjct: 1550 VLDIISKALTDNNMEFAQI---SRVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEA 1606
Query: 1407 DTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKE 1460
V+ + NP + QA+ R HR+GQT+ V+R LI+ TIEERM+ K E
Sbjct: 1607 THVLLVEPILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQAMLKTAE 1660
>At2g16390 [L] KOG0390 DNA repair protein SNF2 family
Length = 888
Score = 58.2 bits (139), Expect = 1e-07
Identities = 33/104 (31%), Positives = 54/104 (51%)
Query: 1365 LDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQA 1424
L G++ + R + + + PD IF S +A G GI+L A ++ D NP++ QA
Sbjct: 745 LTGNTSSEQREWSMETFNSSPDAKIFFGSIKACGEGISLVGASRILILDVPLNPSVTRQA 804
Query: 1425 MDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVME 1468
+ RA R GQ + V YRL+ + EE + +KE + ++ E
Sbjct: 805 IGRAFRPGQKKMVHAYRLIAGSSPEEEDHNTCFKKEVISKMWFE 848
Score = 52.0 bits (123), Expect = 7e-06
Identities = 62/264 (23%), Positives = 112/264 (41%), Gaps = 24/264 (9%)
Query: 675 KTNVESIDFA-TEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGE 733
K+ +E ID T+ R A++ + E+ D KF EE G L +PT E
Sbjct: 292 KSILEIIDVQFTKAKRNTRTYASETRTKRFGES-DNELKFSEEGLMIGGLA-AHPTHAAE 349
Query: 734 ITIDQPKMLACTLKEYQLKGLNWL-ANLYDQGING-ILADEMGLGKTVQSISVLAHLADR 791
+K +Q++G +L +NL G I+A G GKT IS + +
Sbjct: 350 ------------MKPHQIEGFQFLCSNLVADDPGGCIMAHAPGSGKTFMIISFMQSFLAK 397
Query: 792 YNIWGPFIVVTPASTLHNWVNEISRF-VPQFKILPYWG-----NANDRKTLRKFWDRKHL 845
Y P +VV P L W E R+ V +L ++ A L+++ ++K +
Sbjct: 398 YPQAKP-LVVLPKGILPTWKKEFVRWQVEDIPLLDFYSAKAENRAQQLSILKQWMEKKSI 456
Query: 846 RYGRDAPFHVMVTSYQMVVSDASYLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNR 905
+ F +V + +ILDE ++ ++ ++L +
Sbjct: 457 LFLGYQQFSTIVCDDTTDSLSCQEILLKVPSILILDEGHTPRNEDTNLLQSLAQVQTPRK 516
Query: 906 LLLTGTPIQNNMQELWALLHFIMP 929
++L+GT QN+++E++ +L+ + P
Sbjct: 517 VVLSGTLYQNHVKEVFNILNLVRP 540
>Hs17441908 [B] KOG1000 Chromatin remodeling protein HARP/SMARCAL1 DEAD-box
superfamily
Length = 215
Score = 57.4 bits (137), Expect = 2e-07
Identities = 44/154 (28%), Positives = 74/154 (47%), Gaps = 24/154 (15%)
Query: 773 MGLGKTVQSISVLAHLADRYNIWGPFIVVTPASTLHNWVNEISRFVPQFKILPYWGNAND 832
MGLGKT+Q+I + + + P ++V P+S + W EI +++P+ + P N
Sbjct: 1 MGLGKTIQAIGITYFYKEEW----PLLIVVPSSLRYPWTEEIEKWIPE--LSPEEINVIQ 54
Query: 833 RKT-LRKFWDRKHLRYGRDAPFHVMVTSYQMVVSDA----SYLQKMKWQYMILDEAQAIK 887
KT +R+ K V V Y ++ +DA L ++ +I+DE+ +K
Sbjct: 55 NKTDVRRMSTSK-----------VTVLGYGLLTADAKTLIDALNNQNFKVVIVDESHYMK 103
Query: 888 SSQSSRWKTLLSF--HCRNRLLLTGTPIQNNMQE 919
S ++R + LL R +LLTGTP +E
Sbjct: 104 SRNATRSRILLPIVQKARRAILLTGTPALGRPEE 137
>YLR247c [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1556
Score = 55.5 bits (132), Expect = 6e-07
Identities = 36/152 (23%), Positives = 75/152 (48%), Gaps = 9/152 (5%)
Query: 1337 RVLIYFQMTKMMDLMEEYLTYRQYTHIRLDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRA 1396
+V++Y Q T+ + ++ + L H+ S + + +++++ +P + LL+ +
Sbjct: 1381 QVILYSQKTEYLKVIGKVLKLYHIEHLAC--LSNTANVGETINNFKRQPSVTCLLLNVKT 1438
Query: 1397 GGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLIRGTIEERMRDRA 1456
G G+NL A + D N + + QAM R +R+GQ + V+ +IR T+EE +
Sbjct: 1439 LGAGLNLINAKHIFLLDPILNNSDELQAMGRNNRIGQDEETFVWNFMIRNTVEENIL--- 1495
Query: 1457 KQKEHVQQVVMEGKAKENKQKIIEVEKEHSES 1488
+ ++ E K KE +K + ++ E+
Sbjct: 1496 ----RYKCILEERKRKEKSKKGDKYDEAQDET 1523
>CE26384 [L] KOG0298 DEAD box-containing helicase-like transcription
factor/DNA repair protein
Length = 1610
Score = 53.9 bits (128), Expect = 2e-06
Identities = 27/81 (33%), Positives = 46/81 (56%)
Query: 1378 VHDWQTKPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQV 1437
V D+ D + L S G+N+T A+ +IF D ++ +QA+ R +R GQ R +
Sbjct: 1471 VFDFDVSEDTKVLLCSLSLCANGLNMTGANHIIFLDPPHLQSVLNQAIGRINRFGQKRDM 1530
Query: 1438 TVYRLLIRGTIEERMRDRAKQ 1458
VY LL+ G+++ +R+ AK+
Sbjct: 1531 NVYHLLVDGSLDIELRETAKK 1551
>At2g21450 [L] KOG0390 DNA repair protein SNF2 family
Length = 816
Score = 53.9 bits (128), Expect = 2e-06
Identities = 34/127 (26%), Positives = 61/127 (47%), Gaps = 2/127 (1%)
Query: 1365 LDGSSKLDDRRDLVHDWQTKPDIFIFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQA 1424
+ G S + R + + + +F S +A G GI+L A V+ D NP++ QA
Sbjct: 671 ITGDSSNEQREWSMERFNNSLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVTQQA 730
Query: 1425 MDRAHRLGQTRQVTVYRLLIRGTIEERMRDRAKQKEHVQQVVMEGKAKENKQK--IIEVE 1482
+ RA+R GQ R+V Y+L+ + EE + +KE + ++ E ++ ++
Sbjct: 731 VARAYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMSKMWFEWNVGSGREDFGFRAID 790
Query: 1483 KEHSESA 1489
+HS A
Sbjct: 791 ADHSGDA 797
>7294816 [KL] KOG1123 RNA polymerase II transcription initiation/nucleotide
excision repair factor TFIIH 3'-5' helicase subunit SSL2
Length = 798
Score = 53.5 bits (127), Expect = 2e-06
Identities = 63/267 (23%), Positives = 110/267 (40%), Gaps = 35/267 (13%)
Query: 679 ESIDFATEDDEKLRLMAAQNASNALKETQDKARKFDEEDEEDGELNFQNPTSLGEITIDQ 738
E ID ED+++ L K + R + E E +F+N T+ +I ID
Sbjct: 267 EKIDKEEEDEDEANLKTVSFEVAQEKIEVIQKRCIEIEHPLLAEYDFRNDTNNPDINIDL 326
Query: 739 PKMLACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLADRYNIWGPF 798
A L+ YQ K L + + +G++ G GK++ ++ + R
Sbjct: 327 KP--AAVLRPYQEKSLRKMFG-NGRARSGVIVLPCGAGKSLVGVTACCTVRKR------- 376
Query: 799 IVVTPASTLHNWVNEISRFVPQFKILPYWGNANDRKTLRKFWDRKHLRYGRDAPFHVMVT 858
A L N + ++ QFK+ W A+D R + K G ++VT
Sbjct: 377 -----ALVLCNSGVSVEQWKQQFKM---WSTADDSMICRFTSEAKDKPMGCG----ILVT 424
Query: 859 SYQMVVSDAS----------YLQKMKWQYMILDEAQAIKSSQSSRWKTLLSFHCRNRLLL 908
+Y M+ +LQ+ +W M+LDE I + R T++ HC +L L
Sbjct: 425 TYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHC--KLGL 482
Query: 909 TGTPIQNNMQELWALLHFIMPSLFDSH 935
T T ++ + ++ L I P L++++
Sbjct: 483 TATLLRED-DKIADLNFLIGPKLYEAN 508
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.131 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,930,372
Number of Sequences: 60738
Number of extensions: 2959756
Number of successful extensions: 13903
Number of sequences better than 1.0e-05: 159
Number of HSP's better than 0.0 without gapping: 155
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 12835
Number of HSP's gapped (non-prelim): 572
length of query: 1489
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1370
effective length of database: 23,161,394
effective search space: 31731109780
effective search space used: 31731109780
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)