ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2380 good O KOG1641 Posttranslational modification, protein turnover, chaperones Mitochondrial chaperonin
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2380 830163 829849 -105
(105 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YOR020c [O] KOG1641 Mitochondrial chaperonin 178 1e-45
SPCC550.06c [O] KOG1641 Mitochondrial chaperonin 119 9e-28
7294514 [O] KOG1641 Mitochondrial chaperonin 95 1e-20
At1g23100 [O] KOG1641 Mitochondrial chaperonin 92 9e-20
At1g14980 [O] KOG1641 Mitochondrial chaperonin 90 6e-19
CE27242 [O] KOG1641 Mitochondrial chaperonin 87 5e-18
7299838 [O] KOG1641 Mitochondrial chaperonin 87 5e-18
Hs4504523 [O] KOG1641 Mitochondrial chaperonin 81 2e-16
Hs18580841 [O] KOG1641 Mitochondrial chaperonin 69 8e-13
At5g20720 [O] KOG1641 Mitochondrial chaperonin 62 1e-10
Hs17439872 [O] KOG1641 Mitochondrial chaperonin 56 7e-09
>YOR020c [O] KOG1641 Mitochondrial chaperonin
Length = 106
Score = 178 bits (452), Expect = 1e-45
Identities = 88/105 (83%), Positives = 98/105 (92%)
Query: 1 MSTLLKSAKSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNG 60
MSTLLKSAKSIVPL+DRVLVQRIKA+AKTASGLYLPEKNVEKLNQA V+A GPGFTD+NG
Sbjct: 1 MSTLLKSAKSIVPLMDRVLVQRIKAQAKTASGLYLPEKNVEKLNQAEVVAVGPGFTDANG 60
Query: 61 NKITPSVQPGDQVLIPQFGGSTIKLGKDDEVVLFRDSEILAKVVE 105
NK+ P V+ GDQVLIPQFGGSTIKLG DDEV+LFRD+EILAK+ +
Sbjct: 61 NKVVPQVKVGDQVLIPQFGGSTIKLGNDDEVILFRDAEILAKIAK 105
>SPCC550.06c [O] KOG1641 Mitochondrial chaperonin
Length = 104
Score = 119 bits (297), Expect = 9e-28
Identities = 61/105 (58%), Positives = 81/105 (77%), Gaps = 1/105 (0%)
Query: 1 MSTLLKSAKSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNG 60
M+T LKSAKSIVPLLDR+LVQRIKA+ KTASG++LPEK+VEKL++ V++ G G + G
Sbjct: 1 MATKLKSAKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEG 60
Query: 61 NKITPSVQPGDQVLIPQFGGSTIKLGKDDEVVLFRDSEILAKVVE 105
PSV GD+VL+P +GGS IK+G ++E L+RD E+LA + E
Sbjct: 61 KLAQPSVAVGDRVLLPAYGGSNIKVG-EEEYSLYRDHELLAIIKE 104
>7294514 [O] KOG1641 Mitochondrial chaperonin
Length = 103
Score = 95.1 bits (235), Expect = 1e-20
Identities = 50/97 (51%), Positives = 69/97 (70%), Gaps = 2/97 (2%)
Query: 9 KSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTD-SNGNKITPSV 67
K I+P+LDR+L+QR +A KT G+ LPEK V K+ + TVLA GPG + S GN I V
Sbjct: 6 KKIIPMLDRILIQRAEALTKTKGGIVLPEKAVGKVLEGTVLAVGPGTRNASTGNHIPIGV 65
Query: 68 QPGDQVLIPQFGGSTIKL-GKDDEVVLFRDSEILAKV 103
+ GD+VL+P+FGG+ + L G E+ LFR+S+ILAK+
Sbjct: 66 KEGDRVLLPEFGGTKVNLEGDQKELFLFRESDILAKL 102
>At1g23100 [O] KOG1641 Mitochondrial chaperonin
Length = 97
Score = 92.4 bits (228), Expect = 9e-20
Identities = 48/98 (48%), Positives = 69/98 (69%), Gaps = 2/98 (2%)
Query: 8 AKSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNGNKITPSV 67
AK ++P L+RVLV++I +KT SG+ LPEK+ +LN V+A GPG D GN I SV
Sbjct: 2 AKRLIPTLNRVLVEKILPPSKTVSGILLPEKS-SQLNSGRVIAVGPGARDRAGNLIPVSV 60
Query: 68 QPGDQVLIPQFGGSTIKLGKDDEVVLFRDSEILAKVVE 105
+ GD VL+P+FGG+ +KLG + E +L+RD +I+A + E
Sbjct: 61 KEGDNVLLPEFGGTQVKLG-EKEFLLYRDEDIMATLHE 97
>At1g14980 [O] KOG1641 Mitochondrial chaperonin
Length = 97
Score = 89.7 bits (221), Expect = 6e-19
Identities = 46/97 (47%), Positives = 66/97 (67%), Gaps = 2/97 (2%)
Query: 9 KSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNGNKITPSVQ 68
K ++P +R+LVQR+ AKT SG+ LPEK+ KLN V+A GPG D +G I SV+
Sbjct: 2 KRLIPTFNRILVQRVIQPAKTESGILLPEKS-SKLNSGKVIAVGPGSRDKDGKLIPVSVK 60
Query: 69 PGDQVLIPQFGGSTIKLGKDDEVVLFRDSEILAKVVE 105
GD VL+P++GG+ +KLG ++E LFRD ++L + E
Sbjct: 61 EGDTVLLPEYGGTQVKLG-ENEYHLFRDEDVLGTLHE 96
>CE27242 [O] KOG1641 Mitochondrial chaperonin
Length = 108
Score = 86.7 bits (213), Expect = 5e-18
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 1/92 (1%)
Query: 9 KSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNGNKITPSVQ 68
K+ PL DRVLV+R+ AE KT G+ LPEK+ K+ +ATV++AG G + G + +V+
Sbjct: 14 KTFKPLYDRVLVERVAAETKTKGGIMLPEKSQGKVLEATVVSAGAGLRNEKGELVALTVK 73
Query: 69 PGDQVLIPQFGGSTIKLGKDDEVVLFRDSEIL 100
PGD+VL+P++GG+ + + +D E +FR+S++L
Sbjct: 74 PGDRVLLPEYGGTKVVV-EDKEYSIFRESDLL 104
>7299838 [O] KOG1641 Mitochondrial chaperonin
Length = 102
Score = 86.7 bits (213), Expect = 5e-18
Identities = 41/96 (42%), Positives = 66/96 (68%), Gaps = 1/96 (1%)
Query: 9 KSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNG-NKITPSV 67
K ++P+LDR+L+QR + + TA G+ LPE++V K Q V+A GPG + G ++ V
Sbjct: 6 KKVIPMLDRILIQRFEVKTTTAGGILLPEESVPKEMQGVVVAVGPGARNPAGAGHLSVGV 65
Query: 68 QPGDQVLIPQFGGSTIKLGKDDEVVLFRDSEILAKV 103
+ GD+VL+P++GG+ + + E VLFR+S+ILAK+
Sbjct: 66 KEGDRVLLPKYGGTKVDMDDKREYVLFRESDILAKL 101
>Hs4504523 [O] KOG1641 Mitochondrial chaperonin
Length = 102
Score = 81.3 bits (199), Expect = 2e-16
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 9 KSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNGNKITPSVQ 68
+ +PL DRVLV+R AE T G+ LPEK+ K+ QATV+A G G G SV+
Sbjct: 7 RKFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGSKGKGGEIQPVSVK 66
Query: 69 PGDQVLIPQFGGSTIKLGKDDEVVLFRDSEILAKVVE 105
GD+VL+P++GG+ + L D + LFRD +IL K V+
Sbjct: 67 VGDKVLLPEYGGTKVVL-DDKDYFLFRDGDILGKYVD 102
>Hs18580841 [O] KOG1641 Mitochondrial chaperonin
Length = 91
Score = 69.3 bits (168), Expect = 8e-13
Identities = 43/98 (43%), Positives = 59/98 (59%), Gaps = 14/98 (14%)
Query: 9 KSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNGNKITP-SV 67
+ +PLLDRVLV+R AE T G+ LPEK+ KL QA G +I P SV
Sbjct: 7 RKFLPLLDRVLVERRAAETVTKGGIMLPEKSQGKLLQA------------RGREIQPVSV 54
Query: 68 QPGDQVLIPQFGGSTIKLGKDDEVVLFRDSEILAKVVE 105
+ GD+VL+P++GG+ + L D + LFRD +IL K V+
Sbjct: 55 KVGDKVLLPEYGGTKVVL-DDKDYFLFRDGDILRKYVD 91
>At5g20720 [O] KOG1641 Mitochondrial chaperonin
Length = 253
Score = 62.4 bits (150), Expect = 1e-10
Identities = 41/95 (43%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 9 KSIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNGNKITP-SV 67
K + PL DRV ++ +AE KTA GL L E EK + TV+A GPG D G KITP V
Sbjct: 158 KDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPGSLDEEG-KITPLPV 216
Query: 68 QPGDQVLIPQFGGSTIKLGKD-DEVVLFRDSEILA 101
G VL ++ G+ K GKD + R S+++A
Sbjct: 217 STGSTVLYSKYAGNDFK-GKDGSNYIALRASDVMA 250
Score = 48.5 bits (114), Expect = 2e-06
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 10 SIVPLLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNGNKITPSVQP 69
SI PL DRVLV+ +AE KT G+ LP K V+A G G T NKI +V
Sbjct: 61 SIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGK-NKIDITVPT 119
Query: 70 GDQVLIPQFGGSTIKLGKDDEVVLFRD 96
G Q++ ++ G+ ++ ++L D
Sbjct: 120 GAQIIYSKYAGTEVEFNDVKHLILKED 146
>Hs17439872 [O] KOG1641 Mitochondrial chaperonin
Length = 132
Score = 56.2 bits (134), Expect = 7e-09
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 14 LLDRVLVQRIKAEAKTASGLYLPEKNVEKLNQATVLAAGPGFTDSNGNKITPSVQPGDQV 73
L DRV V+RI T G+ LPEK+ K+ QA +A G G G S++ GD+
Sbjct: 12 LFDRVFVERIATTTVTKGGIMLPEKSQGKVLQAKGVAVGSGSKGKGGEIQPVSMRVGDKF 71
Query: 74 LIPQFGGSTIKLGKDDEVVLFRDSEILA 101
L+ ++GG+ + L D + LFRD+ + A
Sbjct: 72 LLLEYGGTRVVL-DDKDYFLFRDAPLSA 98
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.313 0.133 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,850,220
Number of Sequences: 60738
Number of extensions: 235346
Number of successful extensions: 456
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 437
Number of HSP's gapped (non-prelim): 12
length of query: 105
length of database: 30,389,216
effective HSP length: 81
effective length of query: 24
effective length of database: 25,469,438
effective search space: 611266512
effective search space used: 611266512
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)