ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2401 good J KOG1723 Translation, ribosomal structure and biogenesis 60s ribosomal protein L30 isolog
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2401 837544 836951 -198
(198 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YLR009w [J] KOG1723 60s ribosomal protein L30 isolog 239 2e-63
SPAC22E12.13c [J] KOG1723 60s ribosomal protein L30 isolog 156 2e-38
Hs10047102 [J] KOG1723 60s ribosomal protein L30 isolog 154 6e-38
7299448 [J] KOG1723 60s ribosomal protein L30 isolog 139 2e-33
At2g44860 [J] KOG1723 60s ribosomal protein L30 isolog 137 1e-32
Hs17481834 [J] KOG1723 60s ribosomal protein L30 isolog 124 1e-28
Hs17482702_1 [J] KOG1723 60s ribosomal protein L30 isolog 124 1e-28
CE05202 [J] KOG1723 60s ribosomal protein L30 isolog 122 4e-28
ECU02g0810 [J] KOG1723 60s ribosomal protein L30 isolog 109 2e-24
Hs20555802 [J] KOG1723 60s ribosomal protein L30 isolog 105 4e-23
Hs20542847 [J] KOG1723 60s ribosomal protein L30 isolog 97 1e-20
Hs18566138 [J] KOG1723 60s ribosomal protein L30 isolog 90 2e-18
Hs20558164 [J] KOG1723 60s ribosomal protein L30 isolog 82 5e-16
At3g53020 [J] KOG1722 60s ribosomal protein L24 67 2e-11
YGR148c [J] KOG1722 60s ribosomal protein L24 67 2e-11
YGL031c [J] KOG1722 60s ribosomal protein L24 66 3e-11
At2g36620 [J] KOG1722 60s ribosomal protein L24 66 4e-11
SPCC330.14c [J] KOG1722 60s ribosomal protein L24 65 6e-11
SPAC6G9.09c [J] KOG1722 60s ribosomal protein L24 65 6e-11
Hs18548980 [J] KOG1723 60s ribosomal protein L30 isolog 64 1e-10
Hs4506619 [J] KOG1722 60s ribosomal protein L24 63 3e-10
7298059 [J] KOG1722 60s ribosomal protein L24 60 3e-09
CE09047 [J] KOG1722 60s ribosomal protein L24 50 2e-06
>YLR009w [J] KOG1723 60s ribosomal protein L30 isolog
Length = 199
Score = 239 bits (610), Expect = 2e-63
Identities = 123/199 (61%), Positives = 132/199 (65%), Gaps = 1/199 (0%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
MR+Y CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKL+WTKAFRKAAG
Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDF 120
KELAVDSTLTFAQRRNVPVRYNRELVATTLKAM+ AFYKNRM+GN E+DF
Sbjct: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMARIEEIRQKRERAFYKNRMRGNKEKDF 120
Query: 121 LRDKALVESNPXXXXXXXXXXXXXXXKE-EAIEQXXXXXXXXXXXXXXXXXXXXXXXXXX 179
LRDK LVESNP KE E E
Sbjct: 121 LRDKKLVESNPELLRIREVEIARKLAKEQERAESVSEQEESEEEEEDMEIDSDEEEEEQL 180
Query: 180 XXXXXXXXNKRKNSKRIAF 198
N+R+N+K+IAF
Sbjct: 181 EKQKILLKNRRRNTKKIAF 199
>SPAC22E12.13c [J] KOG1723 60s ribosomal protein L30 isolog
Length = 192
Score = 156 bits (395), Expect = 2e-38
Identities = 73/131 (55%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
MRV+ C+FCS P YPGHGIMFVRND+K FRFCRSKCHK FK +RNPRK+ WTKA+RKA G
Sbjct: 1 MRVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHG 60
Query: 61 KELAVDSTLTF-AQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERD 119
KE+ D+ L A RRNVPVRY+R ++ATTL AM FYK R+ G ++
Sbjct: 61 KEMVYDTALAVTAARRNVPVRYDRNVIATTLNAMKRVSQVHAKRERLFYKKRLAGKRAQE 120
Query: 120 FLRDKALVESN 130
+ L+ N
Sbjct: 121 LQEAQKLIAQN 131
>Hs10047102 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 163
Score = 154 bits (390), Expect = 6e-38
Identities = 72/130 (55%), Positives = 89/130 (68%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
MR+ C+FCS P YPGHG+MFVRND K FRFC+SKCHK FK++RNPRK+RWTKAFRKAAG
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDF 120
KEL VD++ F +RRN P++Y REL T+ AM F NR+K N E
Sbjct: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIKQKRQAKFIMNRLKKNKELQK 120
Query: 121 LRDKALVESN 130
++D V+ N
Sbjct: 121 VQDIKEVKQN 130
>7299448 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 191
Score = 139 bits (351), Expect = 2e-33
Identities = 63/130 (48%), Positives = 85/130 (64%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
MR+ C+FCSS YPGHG+ FVRND K F+FCR KCHKAFK+++NPRK+ WTKA+RKAAG
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRKAAG 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDF 120
KELA+D + F +RRNVP++Y+RE L+A+ F R++ + +
Sbjct: 61 KELAIDPSFEFEKRRNVPMKYSRETWQKGLEAIKRVTEIKEKRTSHFVMERLRKGRQVEI 120
Query: 121 LRDKALVESN 130
D V+ N
Sbjct: 121 QMDVKDVQRN 130
>At2g44860 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 159
Score = 137 bits (345), Expect = 1e-32
Identities = 64/130 (49%), Positives = 82/130 (62%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
MR+ C FCSS YPGHGI FVRNDAK FRFCRSKCHK FK +RNPRK++WTKAFR A G
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDF 120
K++ D+T F ++RN P RY+R + TL A+ +NR+K N ++
Sbjct: 61 KDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKKIAKIRTAREAKHIENRLKPNKQKKL 120
Query: 121 LRDKALVESN 130
D ++ N
Sbjct: 121 NDDMKELDQN 130
>Hs17481834 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 187
Score = 124 bits (310), Expect = 1e-28
Identities = 58/123 (47%), Positives = 78/123 (63%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
MR+ C+FCS P YPG+ ++F+ ND K F FC+SKCHK FK++ NPRK+R TK F+KAAG
Sbjct: 1 MRIEKCYFCSGPIYPGYDMLFIHNDCKVFGFCKSKCHKHFKKKCNPRKVRRTKPFQKAAG 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDF 120
KEL VD++ F + RN ++Y REL T+ AM F NR+K N E
Sbjct: 61 KELTVDNSFEFDKHRNELIKYQRELWNKTIDAMKRVEEIKQKHQAKFIMNRLKKNKELQK 120
Query: 121 LRD 123
++D
Sbjct: 121 VQD 123
>Hs17482702_1 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 163
Score = 124 bits (310), Expect = 1e-28
Identities = 59/130 (45%), Positives = 78/130 (59%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M + C+FC P YPGHGIMF N+ K FRFC+SKCHK FK++ NP K+RWTKAF+KA
Sbjct: 1 MHIEKCYFCLGPIYPGHGIMFFCNNCKVFRFCKSKCHKNFKKKCNPHKVRWTKAFQKATS 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDF 120
KEL VD++ F + RN ++Y +EL T+ AM F N +K N E
Sbjct: 61 KELTVDNSFEFEKHRNELIKYQQELWNKTIDAMKRVEEIKQKWQAKFIMNGLKKNKELQK 120
Query: 121 LRDKALVESN 130
++D V+ N
Sbjct: 121 VQDIKEVKQN 130
>CE05202 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 162
Score = 122 bits (305), Expect = 4e-28
Identities = 54/92 (58%), Positives = 71/92 (76%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
MR+ C+FCSSP YPGHGI FVRND+ F+FCRS+C+K FK+++NPRKLR+TKA R+A G
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARRARG 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKA 92
KEL D+T QRR+ PV+Y R + T++A
Sbjct: 61 KELINDATQLLEQRRDEPVKYERAMFQKTIEA 92
>ECU02g0810 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 155
Score = 109 bits (273), Expect = 2e-24
Identities = 57/128 (44%), Positives = 71/128 (54%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
MR+ C FCSS Y GHG ++VRNDAK FRFCR KC K F +R NPRK++WTK RK A
Sbjct: 1 MRIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMAN 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDF 120
KEL D+ LTF R N P Y+R TL ++ F K+R+ E +
Sbjct: 61 KELCNDAILTFEHRLNEPRMYDRAEAERTLSSIPRILEIRKRREDFFIKDRILTGQEMNK 120
Query: 121 LRDKALVE 128
D +E
Sbjct: 121 ESDLKYIE 128
>Hs20555802 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 150
Score = 105 bits (262), Expect = 4e-23
Identities = 55/130 (42%), Positives = 71/130 (54%), Gaps = 13/130 (10%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M + C+FCS P YPGHG+MFV N+ K FRFC+SK RW KAF+ AAG
Sbjct: 1 MCIEKCYFCSGPIYPGHGMMFVHNNCKLFRFCKSKS-------------RWIKAFQNAAG 47
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDF 120
KEL VD++ F +RRN P++Y REL T+ AM F NR+ N E
Sbjct: 48 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKQIEEIKQKCQAKFIMNRLNKNKELQK 107
Query: 121 LRDKALVESN 130
++D V+ N
Sbjct: 108 VQDIKEVKQN 117
>Hs20542847 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 210
Score = 97.4 bits (241), Expect = 1e-20
Identities = 43/71 (60%), Positives = 53/71 (74%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M + C+FCS YPGH +MFV+N+ K FRFC SK HK FK++RNPRK+ WTKAF KAA
Sbjct: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
Query: 61 KELAVDSTLTF 71
KEL VD++ F
Sbjct: 61 KELTVDNSFEF 71
>Hs18566138 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 109
Score = 90.1 bits (222), Expect = 2e-18
Identities = 37/55 (67%), Positives = 44/55 (79%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAF 55
M V C+FC P YPGHG+MF+RND K FRF +SKCHK FK++ NPRK+RWTKAF
Sbjct: 1 MHVEICYFCLGPTYPGHGMMFIRNDCKVFRFRKSKCHKNFKKKCNPRKIRWTKAF 55
>Hs20558164 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 366
Score = 82.0 bits (201), Expect = 5e-16
Identities = 35/55 (63%), Positives = 44/55 (79%)
Query: 27 KEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAGKELAVDSTLTFAQRRNVPVRY 81
K FRFC+SKCHK FK++ NPRK+RWTKAF+KAAG+EL VD + F + RN P+ Y
Sbjct: 311 KVFRFCKSKCHKNFKKKCNPRKVRWTKAFQKAAGEELTVDHSFEFEKHRNEPITY 365
>At3g53020 [J] KOG1722 60s ribosomal protein L24
Length = 163
Score = 67.0 bits (162), Expect = 2e-11
Identities = 40/128 (31%), Positives = 59/128 (45%), Gaps = 16/128 (12%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
++ C F YPG GI F+R+D++ F F SKC + F + P KL WT +RK
Sbjct: 3 LKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHK 62
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDF 120
K+ A ++ +RR Y+R +V TL+ + K R + RD
Sbjct: 63 KDAAQEAVK--RRRRATKKPYSRSIVGATLEVIQ--------------KKRAEKPEVRDA 106
Query: 121 LRDKALVE 128
R+ AL E
Sbjct: 107 AREAALRE 114
>YGR148c [J] KOG1722 60s ribosomal protein L24
Length = 155
Score = 66.6 bits (161), Expect = 2e-11
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M+V F + YPG G +FVR D+K FRF SK FKQR+NPR++ WT FRK
Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNER 118
K + + +R V+ R + +L + A + ++K N E+
Sbjct: 61 KGITEE---VAKKRSRKTVKAQRPITGASLDLIKERRSLKPEVRKANREEKLKANKEK 115
>YGL031c [J] KOG1722 60s ribosomal protein L24
Length = 155
Score = 66.2 bits (160), Expect = 3e-11
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 3/118 (2%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M+V F + YPG G +FVR D+K FRF SK FKQR+NPR++ WT FRK
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNER 118
K + + +R V+ R + +L + A + ++K N E+
Sbjct: 61 KGITEE---VAKKRSRKTVKAQRPITGASLDLIKERRSLKPEVRKANREEKLKANKEK 115
>At2g36620 [J] KOG1722 60s ribosomal protein L24
Length = 177
Score = 65.9 bits (159), Expect = 4e-11
Identities = 40/123 (32%), Positives = 57/123 (45%), Gaps = 16/123 (13%)
Query: 6 CHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAGKELAV 65
C F YPG GI F+R+D++ F F SKC + F + P KL WT +RK K+ A
Sbjct: 21 CRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDAAQ 80
Query: 66 DSTLTFAQRRNVPVRYNRELVATTLKAMSXXXXXXXXXXXAFYKNRMKGNNERDFLRDKA 125
++ +RR Y+R +V TL+ + K R + RD R+ A
Sbjct: 81 EAVK--RRRRATKKPYSRSIVGATLEVIQ--------------KKRAEKPEVRDAAREAA 124
Query: 126 LVE 128
L E
Sbjct: 125 LRE 127
>SPCC330.14c [J] KOG1722 60s ribosomal protein L24
Length = 149
Score = 65.1 bits (157), Expect = 6e-11
Identities = 34/90 (37%), Positives = 47/90 (51%), Gaps = 3/90 (3%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M+V C F S YPG G +FVR D K FRF K F QR+NPR+L WT +R+
Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHK 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTL 90
K ++ + +R V++ R +V L
Sbjct: 61 KGISEEHA---KKRTRRTVKHQRGIVGANL 87
>SPAC6G9.09c [J] KOG1722 60s ribosomal protein L24
Length = 149
Score = 65.1 bits (157), Expect = 6e-11
Identities = 34/90 (37%), Positives = 47/90 (51%), Gaps = 3/90 (3%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M+V C F S YPG G +FVR D K FRF K F QR+NPR+L WT +R+
Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHK 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTL 90
K ++ + +R V++ R +V L
Sbjct: 61 KGISEEHA---KKRTRRTVKHQRGIVGANL 87
>Hs18548980 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 190
Score = 63.9 bits (154), Expect = 1e-10
Identities = 26/42 (61%), Positives = 31/42 (72%)
Query: 7 HFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRK 48
+FC P YPGHGI F+RND K FRFC+SK HK K++ NP K
Sbjct: 57 YFCLGPIYPGHGITFIRNDCKVFRFCKSKRHKKVKKQHNPCK 98
>Hs4506619 [J] KOG1722 60s ribosomal protein L24
Length = 157
Score = 62.8 bits (151), Expect = 3e-10
Identities = 31/90 (34%), Positives = 45/90 (49%), Gaps = 3/90 (3%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M+V C F YPGHG + R D K F+F +KC AF +RNPR++ WT +R+
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRR--- 57
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTL 90
K S +R V++ R + +L
Sbjct: 58 KHKKGQSEEIQKKRTRRAVKFQRAITGASL 87
>7298059 [J] KOG1722 60s ribosomal protein L24
Length = 155
Score = 59.7 bits (143), Expect = 3e-09
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M++ C F YPGHG V+ D K F F KC +++ +RNPRK+ WT +R+
Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTL 90
K + +++ +R ++ R +V +L
Sbjct: 61 KGIEEEASKKRTRRTQ---KFQRAIVGASL 87
>CE09047 [J] KOG1722 60s ribosomal protein L24
Length = 159
Score = 50.1 bits (118), Expect = 2e-06
Identities = 30/93 (32%), Positives = 41/93 (43%)
Query: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLRWTKAFRKAAG 60
M+V C + +PGHG VR D K F K K K RRNPR +RWT +R
Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNK 60
Query: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLKAM 93
K +T + + NR + +L A+
Sbjct: 61 KGTHGQEQVTRKKTKKSVQVVNRAVAGLSLDAI 93
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.324 0.134 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,771,145
Number of Sequences: 60738
Number of extensions: 242207
Number of successful extensions: 648
Number of sequences better than 1.0e-05: 23
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 622
Number of HSP's gapped (non-prelim): 23
length of query: 198
length of database: 30,389,216
effective HSP length: 101
effective length of query: 97
effective length of database: 24,254,678
effective search space: 2352703766
effective search space used: 2352703766
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)