ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2604 suspect: LH S KOG2690 Function unknown Uncharacterized conserved protein, contains BSD domain
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2604 910015 909143 -291
(291 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores:
Score E
Sequences producing significant alignments: (bits) Value
YDR068w [S] KOG2690 Uncharacterized conserved protein contains B... 141 1e-33
>YDR068w [S] KOG2690 Uncharacterized conserved protein contains BSD domain
Length = 310
Score = 141 bits (356), Expect = 1e-33
Identities = 81/236 (34%), Positives = 134/236 (56%), Gaps = 11/236 (4%)
Query: 6 EETATETADAVKVTKHDDKTDEAFQKFEDQVDEQLQKTSKAILGFVKEKDSLNFQIPENL 65
E +TE + ++ DDKT+EAFQK E++V+++ +KT+ A V EKD +I +
Sbjct: 24 ETGSTENTENNELQSRDDKTNEAFQKLEEEVNKRYEKTTSAFKKLVIEKDD-GIEINLPI 82
Query: 66 GGTVTNKAQEMLGKLDDNLEKVEELTQGYWNTVSKKSFWSSMANTISTQFQEVLDFDAKE 125
T AQ+ L KLD+N+ VE L Q YW+ + K+FWS ++ F + D+ +
Sbjct: 83 SNETTETAQKYLKKLDENIHSVESLAQSYWSKMKTKNFWSGFSS-----FDNAAENDSND 137
Query: 126 AEGSNKDTAFS---SITDTKLKQLAIDKSIYLKYNAASLPKD-FVIKEHFEEIQELLNKD 181
+ ++K+ + + T+ +L+ L+ DKS+YL N L D F + E EEI +L D
Sbjct: 138 KDENSKENEIAVGGNRTEAELRTLSKDKSVYLD-NKMDLQLDPFDVDEKTEEICSILQGD 196
Query: 182 SDLKSLHEDVVPAPLDDATFWNIYFTKKAEILNLASKKRDLLSAKEDLGKEQAIGW 237
D+ L D+VP + FW+IYF ++ +IL+ SK++++LS KE +E+ + W
Sbjct: 197 KDISKLMNDIVPHKISYKDFWHIYFLQRNKILDKESKRKEILSKKEKETEEKEVEW 252
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.308 0.126 0.339
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,693,743
Number of Sequences: 60738
Number of extensions: 605574
Number of successful extensions: 2030
Number of sequences better than 1.0e-05: 1
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2027
Number of HSP's gapped (non-prelim): 1
length of query: 291
length of database: 30,389,216
effective HSP length: 105
effective length of query: 186
effective length of database: 24,011,726
effective search space: 4466181036
effective search space used: 4466181036
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)