ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2630 good K KOG0869 Transcription CCAAT-binding factor, subunit A (HAP3)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2630 920106 919492 -205
(205 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBL021c [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 190 1e-48
Hs5453780 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 137 1e-32
SPAC23C11.08 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 132 3e-31
At4g14540 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 130 2e-30
At2g13570 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 129 3e-30
At5g47640 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 127 1e-29
At3g53340 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 124 9e-29
At2g37060 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 124 9e-29
At2g38880 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 124 1e-28
At2g47810 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 119 2e-27
CE14792 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 117 1e-26
7298623 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 115 3e-26
At1g21970 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 108 7e-24
At5g47670 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 107 1e-23
At1g09030 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 106 3e-23
ECU10g0260 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 82 5e-16
Hs18554496 [K] KOG0869 CCAAT-binding factor subunit A (HAP3) 70 2e-12
At5g08190 [K] KOG0871 Class 2 transcription repressor NC2 beta s... 69 4e-12
Hs8393120 [K] KOG0870 DNA polymerase epsilon subunit D 68 8e-12
At5g23090 [K] KOG0871 Class 2 transcription repressor NC2 beta s... 67 2e-11
7298194 [K] KOG0871 Class 2 transcription repressor NC2 beta sub... 64 1e-10
Hs4503381 [K] KOG0871 Class 2 transcription repressor NC2 beta s... 60 2e-09
SPBC30D10.02 [K] KOG0871 Class 2 transcription repressor NC2 bet... 58 8e-09
7297418 [K] KOG0870 DNA polymerase epsilon subunit D 56 3e-08
ECU11g0730 [K] KOG0871 Class 2 transcription repressor NC2 beta ... 54 2e-07
SPBC3D6.09 [K] KOG0870 DNA polymerase epsilon subunit D 52 4e-07
>YBL021c [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 144
Score = 190 bits (483), Expect = 1e-48
Identities = 92/111 (82%), Positives = 101/111 (90%)
Query: 17 LNELAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSG 76
++ L EQDRWLPINNVARLMKNTLP + KVSKDAKECMQECVSE ISFVTSEA DRC +
Sbjct: 32 ISTLREQDRWLPINNVARLMKNTLPPSAKVSKDAKECMQECVSELISFVTSEASDRCAAD 91
Query: 77 KRKTINGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKEDVE 127
KRKTINGEDIL+SLHALGFENYAEVLKIYLAKYRQQQA+KNQ+MY ++D E
Sbjct: 92 KRKTINGEDILISLHALGFENYAEVLKIYLAKYRQQQALKNQLMYEQDDEE 142
>Hs5453780 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 207
Score = 137 bits (344), Expect = 1e-32
Identities = 71/149 (47%), Positives = 93/149 (61%), Gaps = 7/149 (4%)
Query: 2 DTETEAEKQERHNNYLNELAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEF 61
DTE E N EQD +LPI NVAR+MKN +P T K++KDAKEC+QECVSEF
Sbjct: 34 DTEDSMNDHEDTNGSKESFREQDIYLPIANVARIMKNAIPQTGKIAKDAKECVQECVSEF 93
Query: 62 ISFVTSEACDRCTSGKRKTINGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMY 121
ISF+TSEA +RC KRKTINGEDIL ++ LGF++Y E LK+YL K+R + M
Sbjct: 94 ISFITSEASERCHQEKRKTINGEDILFAMSTLGFDSYVEPLKLYLQKFR-------EAMK 146
Query: 122 PKEDVEGSYTEEESRAEDADHVTQERQQP 150
++ + G+ T + +E+ Q P
Sbjct: 147 GEKGIGGAVTATDGLSEELTEEAFTNQLP 175
>SPAC23C11.08 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 116
Score = 132 bits (332), Expect = 3e-31
Identities = 64/98 (65%), Positives = 78/98 (79%)
Query: 27 LPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTINGEDI 86
LPI NVAR+MK+ LP K+SK+AK+C+Q+CVSEFISFVT EA ++CT KRKTI GED+
Sbjct: 12 LPIANVARIMKSALPENAKISKEAKDCVQDCVSEFISFVTGEASEQCTQEKRKTITGEDV 71
Query: 87 LLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKE 124
LL+L+ LGFENYAEVLKI L KYR+QQA M K+
Sbjct: 72 LLALNTLGFENYAEVLKISLTKYREQQARSASMKETKQ 109
>At4g14540 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 161
Score = 130 bits (326), Expect = 2e-30
Identities = 63/107 (58%), Positives = 79/107 (72%)
Query: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
EQDR+LPI NV+R+MK LPA K+SKDAKE +QECVSEFISF+T EA D+C KRKTI
Sbjct: 21 EQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTI 80
Query: 82 NGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKEDVEG 128
NG+D+L ++ LGFE+Y E LK+YL KYR+ + K + D EG
Sbjct: 81 NGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGDKEG 127
>At2g13570 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 215
Score = 129 bits (324), Expect = 3e-30
Identities = 67/136 (49%), Positives = 88/136 (64%), Gaps = 2/136 (1%)
Query: 14 NNYLNELAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRC 73
NN N EQDR+LPI NV R+MK LP K+SKDAKE +QECVSEFISFVT EA D+C
Sbjct: 28 NNNNNNNKEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKC 87
Query: 74 TSGKRKTINGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKEDVEGSYTEE 133
KRKTING+DI+ ++ LGFE+Y LK+YL KYR + K + PK+ + ++
Sbjct: 88 QREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEK--VNSPKQQQQRQQQQQ 145
Query: 134 ESRAEDADHVTQERQQ 149
+ ++ QE+ Q
Sbjct: 146 IQQQNHHNYQFQEQDQ 161
>At5g47640 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 190
Score = 127 bits (318), Expect = 1e-29
Identities = 60/102 (58%), Positives = 78/102 (75%)
Query: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
EQDR+LPI NV+R+MK LPA K+SKDAKE MQECVSEFISFVT EA D+C KRKTI
Sbjct: 27 EQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTI 86
Query: 82 NGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPK 123
NG+D+L ++ LGFE+Y E LK+YL ++R+ + + + P+
Sbjct: 87 NGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGRPQ 128
>At3g53340 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 228
Score = 124 bits (311), Expect = 9e-29
Identities = 65/127 (51%), Positives = 85/127 (66%), Gaps = 10/127 (7%)
Query: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
EQDR+LPI N++R+MK LP K++KDAKE MQECVSEFISFVTSEA D+C KRKTI
Sbjct: 29 EQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTI 88
Query: 82 NGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKEDVEGSYTEEESRAEDAD 141
NG+D+L ++ LGFE+Y + LK+YL +YR+ + D +GS ES A+
Sbjct: 89 NGDDLLWAMATLGFEDYIDPLKVYLMRYREMEG----------DTKGSGKGGESSAKRDG 138
Query: 142 HVTQERQ 148
+Q Q
Sbjct: 139 QPSQVSQ 145
>At2g37060 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 178
Score = 124 bits (311), Expect = 9e-29
Identities = 58/90 (64%), Positives = 74/90 (81%)
Query: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
EQDR+LPI N++R+MK LPA K++KDAKE +QECVSEFISFVTSEA D+C KRKTI
Sbjct: 30 EQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTI 89
Query: 82 NGEDILLSLHALGFENYAEVLKIYLAKYRQ 111
NG+D+L ++ LGFE+Y E LK+YL +YR+
Sbjct: 90 NGDDLLWAMATLGFEDYMEPLKVYLMRYRE 119
>At2g38880 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 138
Score = 124 bits (310), Expect = 1e-28
Identities = 56/90 (62%), Positives = 73/90 (80%)
Query: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
EQDR+LPI N++R+MK LP K+ KDAK+ +QECVSEFISF+TSEA D+C KRKT+
Sbjct: 21 EQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTV 80
Query: 82 NGEDILLSLHALGFENYAEVLKIYLAKYRQ 111
NG+D+L ++ LGFE+Y E LKIYLA+YR+
Sbjct: 81 NGDDLLWAMATLGFEDYLEPLKIYLARYRE 110
>At2g47810 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 160
Score = 119 bits (299), Expect = 2e-27
Identities = 61/103 (59%), Positives = 76/103 (73%), Gaps = 2/103 (1%)
Query: 8 EKQERHNNYLNELAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTS 67
E Q++ + + + EQDR LPI NV R+MKN LPA KVSK+AKE MQECVSEFISFVT
Sbjct: 39 EDQQQEESMM--VKEQDRLLPIANVGRIMKNILPANAKVSKEAKETMQECVSEFISFVTG 96
Query: 68 EACDRCTSGKRKTINGEDILLSLHALGFENYAEVLKIYLAKYR 110
EA D+C KRKT+NG+DI ++ LGF++YA LK YL +YR
Sbjct: 97 EASDKCHKEKRKTVNGDDICWAMANLGFDDYAAQLKKYLHRYR 139
>CE14792 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 403
Score = 117 bits (293), Expect = 1e-26
Identities = 57/113 (50%), Positives = 76/113 (66%)
Query: 3 TETEAEKQERHNNYLNELAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFI 62
T +E + H N L +Q+R+LPI NV R+MK + K++KDAKEC QECVSEFI
Sbjct: 42 TISEIAMELHHPNKSQVLLDQERFLPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFI 101
Query: 63 SFVTSEACDRCTSGKRKTINGEDILLSLHALGFENYAEVLKIYLAKYRQQQAI 115
SF+ SEA + C KRKTI +D+L ++ A GF+NYAE ++I+L KYRQ I
Sbjct: 102 SFIASEAAEICNITKRKTITADDLLTAMEATGFDNYAEPMRIFLQKYRQAHKI 154
>7298623 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 183
Score = 115 bits (289), Expect = 3e-26
Identities = 53/96 (55%), Positives = 73/96 (75%)
Query: 20 LAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRK 79
L EQDR+LPI N+ ++MK +P K++KDA+EC+QECVSEFISF++SEA +R + RK
Sbjct: 36 LREQDRFLPICNIIKIMKVPVPQNGKIAKDARECIQECVSEFISFISSEAIERSVAENRK 95
Query: 80 TINGEDILLSLHALGFENYAEVLKIYLAKYRQQQAI 115
T+NG+D+L++ LGF+NY E L IYL KYR+ I
Sbjct: 96 TVNGDDLLVAFSNLGFDNYVEPLSIYLQKYREVSEI 131
>At1g21970 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 208
Score = 108 bits (269), Expect = 7e-24
Identities = 49/90 (54%), Positives = 69/90 (76%)
Query: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
EQD+++PI NV R+M+ TLP+ K+S DAKE +QECVSE+ISFVT EA +RC +RKTI
Sbjct: 29 EQDQYMPIANVIRIMRKTLPSHAKISDDAKETIQECVSEYISFVTGEANERCQREQRKTI 88
Query: 82 NGEDILLSLHALGFENYAEVLKIYLAKYRQ 111
EDIL ++ LGF+NY + L +++ +YR+
Sbjct: 89 TAEDILWAMSKLGFDNYVDPLTVFINRYRE 118
>At5g47670 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 205
Score = 107 bits (266), Expect = 1e-23
Identities = 49/90 (54%), Positives = 68/90 (75%)
Query: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
EQDR++PI NV R+M+ LPA K+S D+KE +QECVSE+ISF+T EA +RC +RKTI
Sbjct: 29 EQDRFMPIANVIRIMRRILPAHAKISDDSKETIQECVSEYISFITGEANERCQREQRKTI 88
Query: 82 NGEDILLSLHALGFENYAEVLKIYLAKYRQ 111
ED+L ++ LGF++Y E L +YL +YR+
Sbjct: 89 TAEDVLWAMSKLGFDDYIEPLTLYLHRYRE 118
>At1g09030 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 139
Score = 106 bits (264), Expect = 3e-23
Identities = 53/126 (42%), Positives = 81/126 (64%), Gaps = 1/126 (0%)
Query: 20 LAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRK 79
+ ++DR LPI NV RLMK LP+ K+SK+AK+ +QEC +EFISFVT EA ++C RK
Sbjct: 1 MTDEDRLLPIANVGRLMKQILPSNAKISKEAKQTVQECATEFISFVTCEASEKCHRENRK 60
Query: 80 TINGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKEDVEGSYTEEESRAED 139
T+NG+DI +L LG +NYA+ + +L KYR+ + + + D G+ E +R++
Sbjct: 61 TVNGDDIWWALSTLGLDNYADAVGRHLHKYREAERERTEHNKGSND-SGNEKETNTRSDV 119
Query: 140 ADHVTQ 145
+ T+
Sbjct: 120 QNQSTK 125
>ECU10g0260 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 118
Score = 82.0 bits (201), Expect = 5e-16
Identities = 39/92 (42%), Positives = 58/92 (62%)
Query: 20 LAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRK 79
L DR LPI N++++MK +P KV+KDAKE MQ+ EFI+ +T A + C S RK
Sbjct: 8 LRPTDRSLPIANISKIMKKPIPKEAKVAKDAKEIMQKSAGEFIAIITCRAKEICESEARK 67
Query: 80 TINGEDILLSLHALGFENYAEVLKIYLAKYRQ 111
T+ GED++ ++ L YAE+ + Y +YR+
Sbjct: 68 TVTGEDLIRAMDELDMPYYAELARKYYIQYRE 99
>Hs18554496 [K] KOG0869 CCAAT-binding factor subunit A (HAP3)
Length = 191
Score = 70.5 bits (171), Expect = 2e-12
Identities = 47/149 (31%), Positives = 64/149 (42%), Gaps = 42/149 (28%)
Query: 2 DTETEAEKQERHNNYLNELAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEF 61
DTE QE N EQD +LPI NVAR+MKN +P T K++KD KEC+QECVS
Sbjct: 34 DTEESMSDQEDTNGSKVSFREQDMYLPITNVARIMKNAIPQTGKIAKDVKECVQECVS-- 91
Query: 62 ISFVTSEACDRCTSGKRKTINGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMY 121
++Y E LK+YL K+R + M
Sbjct: 92 ---------------------------------LDSYVEPLKLYLQKFR-------EAMK 111
Query: 122 PKEDVEGSYTEEESRAEDADHVTQERQQP 150
++ V G+ T + +E+ Q P
Sbjct: 112 GEKGVGGAVTATDGLSEELTEEAFTNQLP 140
>At5g08190 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 162
Score = 68.9 bits (167), Expect = 4e-12
Identities = 37/118 (31%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 21 AEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKT 80
+++D LP + +++K LPA +V++DA++ + EC EFI+ ++SE+ + C ++T
Sbjct: 10 SKEDASLPKATMTKIIKEMLPADVRVARDAQDLLIECCVEFINLISSESNEVCNKEDKRT 69
Query: 81 INGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKEDVEGSYTEEESRAE 138
I E +L +L LGF Y E ++Y A + + + K + TEEE+ AE
Sbjct: 70 IAPEHVLKALQVLGFGEYVE--EVYAAYEQHKYETMDSQRSVKMNSGAEMTEEEAAAE 125
>Hs8393120 [K] KOG0870 DNA polymerase epsilon subunit D
Length = 147
Score = 68.2 bits (165), Expect = 8e-12
Identities = 37/129 (28%), Positives = 65/129 (49%)
Query: 23 QDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTIN 82
+D LP + R++K LP +SK+A+ + S F+ + TS A + GKRKT+N
Sbjct: 6 EDLNLPNAVITRIIKEALPDGVNISKEARSAISRAASVFVLYATSCANNFAMKGKRKTLN 65
Query: 83 GEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKEDVEGSYTEEESRAEDADH 142
D+L ++ + F+ + LK L YR++Q K + K+ + T+ E + + D
Sbjct: 66 ASDVLSAMEEMEFQRFVTPLKEALEAYRREQKGKKEASEQKKKDKDKKTDSEEQDKSRDE 125
Query: 143 VTQERQQPL 151
E ++ L
Sbjct: 126 DNDEDEERL 134
>At5g23090 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 159
Score = 67.0 bits (162), Expect = 2e-11
Identities = 38/119 (31%), Positives = 68/119 (56%), Gaps = 3/119 (2%)
Query: 21 AEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKT 80
+++D LP + +++K LP +V++DA++ + EC EFI+ V+SE+ D C ++T
Sbjct: 10 SKEDASLPKATMTKIIKEMLPPDVRVARDAQDLLIECCVEFINLVSSESNDVCNKEDKRT 69
Query: 81 INGEDILLSLHALGFENYAEVLKIYLA-KYRQQQAIKNQMMYPKEDVEGSYTEEESRAE 138
I E +L +L LGF Y E ++Y A + + + +++ K + TEEE+ AE
Sbjct: 70 IAPEHVLKALQVLGFGEYIE--EVYAAYEQHKYETMQDTQRSVKWNPGAQMTEEEAAAE 126
>7298194 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 183
Score = 64.3 bits (155), Expect = 1e-10
Identities = 42/137 (30%), Positives = 74/137 (53%), Gaps = 10/137 (7%)
Query: 21 AEQDRW-LPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRK 79
AE D LP ++ +++K +P T +V+ +++E + C SEFI ++SEA + C +K
Sbjct: 13 AEDDELTLPRASINKIIKELVP-TVRVANESRELILNCCSEFIHLISSEANEVCNMRNKK 71
Query: 80 TINGEDILLSLHALGFENYAEVLKIYL-------AKYRQQQAIKNQMMYPKEDVEGSYTE 132
TIN E +L +L LGF +Y + + L AK R+Q + P+E++ E
Sbjct: 72 TINAEHVLEALERLGFHDYKQEAEAVLHDCKEVAAKRRRQSTRLENLGIPEEELLRQQQE 131
Query: 133 EESRAEDADHVTQERQQ 149
++A + + +E+QQ
Sbjct: 132 LFAKARE-EQAREEQQQ 147
>Hs4503381 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 176
Score = 60.5 bits (145), Expect = 2e-09
Identities = 40/134 (29%), Positives = 72/134 (52%), Gaps = 10/134 (7%)
Query: 22 EQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTI 81
+ D +P + +++K TLP +V+ DA+E + C +EFI ++SEA + C ++KTI
Sbjct: 8 DDDLTIPRAAINKMIKETLP-NVRVANDARELVVNCCTEFIHLISSEANEICNKSEKKTI 66
Query: 82 NGEDILLSLHALGFENY----AEVL---KIYLAKYRQQQAIKNQMMYPKEDVEGSYTE-- 132
+ E ++ +L +LGF +Y EVL K K R+ + + P+E++ E
Sbjct: 67 SPEHVIQALESLGFGSYISEVKEVLQECKTVALKRRKASSRLENLGIPEEELLRQQQELF 126
Query: 133 EESRAEDADHVTQE 146
++R + A+ QE
Sbjct: 127 AKARQQQAELAQQE 140
>SPBC30D10.02 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 161
Score = 58.2 bits (139), Expect = 8e-09
Identities = 37/130 (28%), Positives = 72/130 (54%), Gaps = 4/130 (3%)
Query: 21 AEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKT 80
A+ + LP V +++ + LP +K+A++ + EC EFI V+SEA + C +KT
Sbjct: 6 ADDELSLPKATVQKMVSDILPVDLTFTKEARDLLIECCVEFIHLVSSEANEICEKEAKKT 65
Query: 81 INGEDILLSLHALGFENY-AEVLKIYLAKYRQQQAIKNQMMYPKEDVEGSYTEEESRAED 139
I E I+ +L L F+ Y AE L++ A++++QQ KN+ + + + +E +
Sbjct: 66 IAAEHIIKALENLEFKEYIAEALEV-AAEHKEQQ--KNREKKSSKFEQSGVSRDELLRQQ 122
Query: 140 ADHVTQERQQ 149
+ +++ R++
Sbjct: 123 EELLSRARER 132
>7297418 [K] KOG0870 DNA polymerase epsilon subunit D
Length = 128
Score = 56.2 bits (134), Expect = 3e-08
Identities = 39/121 (32%), Positives = 57/121 (46%), Gaps = 3/121 (2%)
Query: 23 QDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKRKTIN 82
+D LP + RL+K LP + VSK+A+ + S F FVTS + KTI
Sbjct: 6 EDLNLPNAVIGRLIKEALPESASVSKEARAAIARAASVFAIFVTSSSTALAHKQNHKTIT 65
Query: 83 GEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKED---VEGSYTEEESRAED 139
+DIL +L L FE++ L L YR+ K + K+D E + + AE+
Sbjct: 66 AKDILQTLTELDFESFVPSLTQDLEVYRKVVKEKKESKASKKDSNTAENANASATATAEE 125
Query: 140 A 140
A
Sbjct: 126 A 126
>ECU11g0730 [K] KOG0871 Class 2 transcription repressor NC2 beta subunit (Dr1)
Length = 147
Score = 53.5 bits (127), Expect = 2e-07
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 19 ELAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTSEACDRCTSGKR 78
E + + LP V +++ + LP + V K++KE Q F++ +T EA C K+
Sbjct: 4 EKNDDENTLPKATVDKMVSSMLPKNSVVPKESKEIFQNACIYFLNMLTLEANKACEEEKK 63
Query: 79 KTINGEDILLSLHALGFENYAE 100
KTI+ E + +L LGFE+Y E
Sbjct: 64 KTISYEHVYKALKNLGFESYVE 85
>SPBC3D6.09 [K] KOG0870 DNA polymerase epsilon subunit D
Length = 210
Score = 52.4 bits (124), Expect = 4e-07
Identities = 35/142 (24%), Positives = 72/142 (50%), Gaps = 6/142 (4%)
Query: 8 EKQERHNNYLNELAEQDRWLPINNVARLMKNTLPATTKVSKDAKECMQECVSEFISFVTS 67
+ + + + L++LA LP + + RL+K LP + V K+A + M + F+SF+TS
Sbjct: 3 QDKSKETSELDDLA-----LPRSIIMRLVKGVLPEKSLVQKEALKAMINSATLFVSFLTS 57
Query: 68 EACDRCTSGKRKTINGEDILLSLHALGFENYAEVLKIYLAKYRQQQAIKNQMMYPKEDVE 127
+ + T+ RK + +D+L +L + + +++ LK +L Y K + DV+
Sbjct: 58 ASGEIATNNNRKILMPQDVLNALDEIEYPEFSKTLKKHLEAYELALKEKRLKLPNVSDVD 117
Query: 128 GSYTEEESRAEDADHVTQERQQ 149
+ + + A D + +E+ +
Sbjct: 118 -NRKKAKIDAHDTTPLDEEKDE 138
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.311 0.125 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,905,805
Number of Sequences: 60738
Number of extensions: 391377
Number of successful extensions: 1197
Number of sequences better than 1.0e-05: 26
Number of HSP's better than 0.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1170
Number of HSP's gapped (non-prelim): 27
length of query: 205
length of database: 30,389,216
effective HSP length: 101
effective length of query: 104
effective length of database: 24,254,678
effective search space: 2522486512
effective search space used: 2522486512
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)