ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2753 good J KOG1722 Translation, ribosomal structure and biogenesis 60s ribosomal protein L24
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2753 957487 957951 155
(155 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR148c [J] KOG1722 60s ribosomal protein L24 213 6e-56
YGL031c [J] KOG1722 60s ribosomal protein L24 209 9e-55
SPCC330.14c [J] KOG1722 60s ribosomal protein L24 147 4e-36
SPAC6G9.09c [J] KOG1722 60s ribosomal protein L24 147 4e-36
Hs4506619 [J] KOG1722 60s ribosomal protein L24 120 1e-27
7298059 [J] KOG1722 60s ribosomal protein L24 109 1e-24
At3g53020 [J] KOG1722 60s ribosomal protein L24 103 7e-23
At2g36620 [J] KOG1722 60s ribosomal protein L24 99 2e-21
CE09047 [J] KOG1722 60s ribosomal protein L24 81 6e-16
SPAC22E12.13c [J] KOG1723 60s ribosomal protein L30 isolog 70 9e-13
Hs10047102 [J] KOG1723 60s ribosomal protein L30 isolog 68 4e-12
7299448 [J] KOG1723 60s ribosomal protein L30 isolog 65 3e-11
At2g44860 [J] KOG1723 60s ribosomal protein L30 isolog 65 4e-11
CE05202 [J] KOG1723 60s ribosomal protein L30 isolog 63 2e-10
ECU02g0810 [J] KOG1723 60s ribosomal protein L30 isolog 59 3e-09
YLR009w [J] KOG1723 60s ribosomal protein L30 isolog 58 6e-09
Hs18566138 [J] KOG1723 60s ribosomal protein L30 isolog 55 5e-08
Hs18582901 [J] KOG1722 60s ribosomal protein L24 54 8e-08
Hs20542847 [J] KOG1723 60s ribosomal protein L30 isolog 51 5e-07
Hs17482702_1 [J] KOG1723 60s ribosomal protein L30 isolog 50 1e-06
Hs17481834 [J] KOG1723 60s ribosomal protein L30 isolog 48 6e-06
>YGR148c [J] KOG1722 60s ribosomal protein L24
Length = 155
Score = 213 bits (543), Expect = 6e-56
Identities = 111/155 (71%), Positives = 120/155 (76%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
MKVE+DSFSGAKIYPGRGTLFVRGDSKIFRFQ+SKSASLF QRKNPRRIAWTVL+R+HHK
Sbjct: 1 MKVEVDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 61 KGITEEVARKRTRKSVKAQRAVVGASLELIKERRSLKPEVXXXXXXXXXXXXXXXXXXXX 120
KGITEEVA+KR+RK+VKAQR + GASL+LIKERRSLKPEV
Sbjct: 61 KGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEVRKANREEKLKANKEKKRAEK 120
Query: 121 XXXXXXXXXLAAAQGSKVSKQQAKGAFQKVAATSR 155
A QGSKVSKQQAKGAFQKVAATSR
Sbjct: 121 AARKAEKAKSAGVQGSKVSKQQAKGAFQKVAATSR 155
>YGL031c [J] KOG1722 60s ribosomal protein L24
Length = 155
Score = 209 bits (533), Expect = 9e-55
Identities = 110/155 (70%), Positives = 118/155 (75%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQ+SKSASLF QRKNPRRIAWTVL+R+HHK
Sbjct: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPRRIAWTVLFRKHHK 60
Query: 61 KGITEEVARKRTRKSVKAQRAVVGASLELIKERRSLKPEVXXXXXXXXXXXXXXXXXXXX 120
KGITEEVA+KR+RK+VKAQR + GASL+LIKERRSLKPEV
Sbjct: 61 KGITEEVAKKRSRKTVKAQRPITGASLDLIKERRSLKPEVRKANREEKLKANKEKKKAEK 120
Query: 121 XXXXXXXXXLAAAQGSKVSKQQAKGAFQKVAATSR 155
A Q SK SKQQAKGAFQKVAATSR
Sbjct: 121 AARKAEKAKSAGTQSSKFSKQQAKGAFQKVAATSR 155
>SPCC330.14c [J] KOG1722 60s ribosomal protein L24
Length = 149
Score = 147 bits (372), Expect = 4e-36
Identities = 69/100 (69%), Positives = 88/100 (88%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
MKVE+ SFSG+K+YPG G LFVRGD+K+FRF + KS SLF QRKNPRR++WTVLYRR HK
Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHK 60
Query: 61 KGITEEVARKRTRKSVKAQRAVVGASLELIKERRSLKPEV 100
KGI+EE A+KRTR++VK QR +VGA+L++IKE+R+ +PEV
Sbjct: 61 KGISEEHAKKRTRRTVKHQRGIVGANLDVIKEKRNQRPEV 100
>SPAC6G9.09c [J] KOG1722 60s ribosomal protein L24
Length = 149
Score = 147 bits (372), Expect = 4e-36
Identities = 69/100 (69%), Positives = 88/100 (88%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
MKVE+ SFSG+K+YPG G LFVRGD+K+FRF + KS SLF QRKNPRR++WTVLYRR HK
Sbjct: 1 MKVEVCSFSGSKVYPGAGRLFVRGDNKVFRFVNKKSESLFLQRKNPRRLSWTVLYRRMHK 60
Query: 61 KGITEEVARKRTRKSVKAQRAVVGASLELIKERRSLKPEV 100
KGI+EE A+KRTR++VK QR +VGA+L++IKE+R+ +PEV
Sbjct: 61 KGISEEHAKKRTRRTVKHQRGIVGANLDVIKEKRNQRPEV 100
>Hs4506619 [J] KOG1722 60s ribosomal protein L24
Length = 157
Score = 120 bits (300), Expect = 1e-27
Identities = 58/100 (58%), Positives = 75/100 (75%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
MKVE+ SFSG KIYPG G + R D K+F+F ++K S F ++NPR+I WTVLYRR HK
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 61 KGITEEVARKRTRKSVKAQRAVVGASLELIKERRSLKPEV 100
KG +EE+ +KRTR++VK QRA+ GASL I +R+ KPEV
Sbjct: 61 KGQSEEIQKKRTRRAVKFQRAITGASLADIMAKRNQKPEV 100
>7298059 [J] KOG1722 60s ribosomal protein L24
Length = 155
Score = 109 bits (273), Expect = 1e-24
Identities = 52/100 (52%), Positives = 70/100 (70%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
MK+ + +FSG KIYPG G V+ D K F F K + ++NPR++ WTVLYRR H+
Sbjct: 1 MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60
Query: 61 KGITEEVARKRTRKSVKAQRAVVGASLELIKERRSLKPEV 100
KGI EE ++KRTR++ K QRA+VGASL I +R++KPEV
Sbjct: 61 KGIEEEASKKRTRRTQKFQRAIVGASLAEILAKRNMKPEV 100
>At3g53020 [J] KOG1722 60s ribosomal protein L24
Length = 163
Score = 103 bits (258), Expect = 7e-23
Identities = 56/156 (35%), Positives = 82/156 (51%), Gaps = 7/156 (4%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
+K E+ FSG KIYPGRG F+R DS++F F +SK FH + P ++AWT +YR+ HK
Sbjct: 3 LKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQHK 62
Query: 61 KGITEEVARKRTRKSVKA-QRAVVGASLELIKERRSLKPEVXXXXXXXXXXXXXXXXXXX 119
K +E ++R R + K R++VGA+LE+I+++R+ KPEV
Sbjct: 63 KDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKT 122
Query: 120 XXXXXXXXXXLAAAQGSKVSKQQAKGAFQKVAATSR 155
A+ Q Q+ K F K AA S+
Sbjct: 123 KDEKKAKKVEFASKQ------QKVKANFPKAAAASK 152
>At2g36620 [J] KOG1722 60s ribosomal protein L24
Length = 177
Score = 99.4 bits (246), Expect = 2e-21
Identities = 55/150 (36%), Positives = 77/150 (50%), Gaps = 5/150 (3%)
Query: 4 EIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHKKGI 63
E+ FSG KIYPGRG F+R DS++F F +SK FH + P ++ WT +YR+ HKK
Sbjct: 19 ELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQHKKDA 78
Query: 64 TEEVARKRTRKSVKA-QRAVVGASLELIKERRSLKPEVXXXXXXXXXXXXXXXXXXXXXX 122
+E ++R R + K R++VGA+LE+I+++R+ KPEV
Sbjct: 79 AQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIKKTKDE 138
Query: 123 XXXXXXXLAAAQGSKVSKQQAKGAFQKVAA 152
A SK K Q KG K AA
Sbjct: 139 KKAKKVEYA----SKQQKSQVKGNIPKSAA 164
>CE09047 [J] KOG1722 60s ribosomal protein L24
Length = 159
Score = 80.9 bits (198), Expect = 6e-16
Identities = 48/98 (48%), Positives = 61/98 (61%), Gaps = 3/98 (3%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
MKVE +SG KI+PG G VR D K+ F S K+ R+NPR I WTVLYR +K
Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNK 60
Query: 61 KGI--TEEVARKRTRKSVK-AQRAVVGASLELIKERRS 95
KG E+V RK+T+KSV+ RAV G SL+ I +R+
Sbjct: 61 KGTHGQEQVTRKKTKKSVQVVNRAVAGLSLDAILAKRN 98
>SPAC22E12.13c [J] KOG1723 60s ribosomal protein L30 isolog
Length = 192
Score = 70.5 bits (171), Expect = 9e-13
Identities = 36/95 (37%), Positives = 51/95 (52%), Gaps = 4/95 (4%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M+V F +YPG G +FVR DSK+FRF SK F ++NPR++AWT YR+ H
Sbjct: 1 MRVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPRKVAWTKAYRKAHG 60
Query: 61 KGITEE----VARKRTRKSVKAQRAVVGASLELIK 91
K + + V R V+ R V+ +L +K
Sbjct: 61 KEMVYDTALAVTAARRNVPVRYDRNVIATTLNAMK 95
>Hs10047102 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 163
Score = 68.2 bits (165), Expect = 4e-12
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M++E F IYPG G +FVR D K+FRF SK F +++NPR++ WT +R+
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPRKVRWTKAFRKAAG 60
Query: 61 KGITEEVA---RKRTRKSVKAQRAVVGASLELIKERRSLK 97
K +T + + KR + +K QR + +++ +K +K
Sbjct: 61 KELTVDNSFEFEKRRNEPIKYQRELWNKTIDAMKRVEEIK 100
>7299448 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 191
Score = 65.5 bits (158), Expect = 3e-11
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 3/100 (3%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M+++ F +KIYPG G FVR D K+F+F K F ++KNPR++ WT YR+
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPRKVGWTKAYRKAAG 60
Query: 61 KGITEEVA---RKRTRKSVKAQRAVVGASLELIKERRSLK 97
K + + + KR +K R LE IK +K
Sbjct: 61 KELAIDPSFEFEKRRNVPMKYSRETWQKGLEAIKRVTEIK 100
>At2g44860 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 159
Score = 65.1 bits (157), Expect = 4e-11
Identities = 35/95 (36%), Positives = 52/95 (53%), Gaps = 3/95 (3%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M++E F + IYPG G FVR D+KIFRF SK F ++NPR++ WT +R H
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query: 61 KGITEEVA---RKRTRKSVKAQRAVVGASLELIKE 92
K +T++ K+ + + R V +L IK+
Sbjct: 61 KDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKK 95
>CE05202 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 162
Score = 62.8 bits (151), Expect = 2e-10
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M++E F + IYPG G FVR DS +F+F S+ LF ++KNPR++ +T RR
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPRKLRFTKAARRARG 60
Query: 61 KGITEEVAR---KRTRKSVKAQRAVVGASLELIKERRSLK 97
K + + + +R + VK +RA+ ++E K +LK
Sbjct: 61 KELINDATQLLEQRRDEPVKYERAMFQKTIEAAKTISALK 100
>ECU02g0810 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 155
Score = 58.5 bits (140), Expect = 3e-09
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M++E F + IY G GT++VR D+K+FRF K LF +R NPR++ WT + R+
Sbjct: 1 MRIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPRKVKWTKISRKMAN 60
Query: 61 KGITEE 66
K + +
Sbjct: 61 KELCND 66
>YLR009w [J] KOG1723 60s ribosomal protein L30 isolog
Length = 199
Score = 57.8 bits (138), Expect = 6e-09
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M++ F + YPG G +FVR D+K FRF SK F QR+NPR++ WT +R+
Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPRKLKWTKAFRKAAG 60
Query: 61 KGITEE---VARKRTRKSVKAQRAVVGASLE 88
K + + +R V+ R +V +L+
Sbjct: 61 KELAVDSTLTFAQRRNVPVRYNRELVATTLK 91
>Hs18566138 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 109
Score = 54.7 bits (130), Expect = 5e-08
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWT 52
M VEI F YPG G +F+R D K+FRF+ SK F ++ NPR+I WT
Sbjct: 1 MHVEICYFCLGPTYPGHGMMFIRNDCKVFRFRKSKCHKNFKKKCNPRKIRWT 52
>Hs18582901 [J] KOG1722 60s ribosomal protein L24
Length = 95
Score = 53.9 bits (128), Expect = 8e-08
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 21/100 (21%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
MKV++ S SG K+YP G + R D ++F+F + K R HK
Sbjct: 1 MKVKLYSLSGYKVYPRHGRRYTRTDREVFQFLNVK---------------------RKHK 39
Query: 61 KGITEEVARKRTRKSVKAQRAVVGASLELIKERRSLKPEV 100
KG EE+ +KR ++V+ Q A+ ASL + +R+ K EV
Sbjct: 40 KGHLEEIQKKRNCQAVRFQGAISDASLADLMAKRNQKFEV 79
>Hs20542847 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 210
Score = 51.2 bits (121), Expect = 5e-07
Identities = 23/64 (35%), Positives = 37/64 (56%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M +E F IYPG +FV+ + K+FRF +SK F +++NPR++ WT + +
Sbjct: 1 MCIEKCYFCSGSIYPGHSMMFVQNNCKVFRFCNSKYHKNFKKKRNPRKVGWTKAFWKAAD 60
Query: 61 KGIT 64
K +T
Sbjct: 61 KELT 64
>Hs17482702_1 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 163
Score = 50.1 bits (118), Expect = 1e-06
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M +E F IYPG G +F + K+FRF SK F ++ NP ++ WT +++
Sbjct: 1 MHIEKCYFCLGPIYPGHGIMFFCNNCKVFRFCKSKCHKNFKKKCNPHKVRWTKAFQKATS 60
Query: 61 KGITEEVA---RKRTRKSVKAQRAVVGASLELIKERRSLK 97
K +T + + K + +K Q+ + +++ +K +K
Sbjct: 61 KELTVDNSFEFEKHRNELIKYQQELWNKTIDAMKRVEEIK 100
>Hs17481834 [J] KOG1723 60s ribosomal protein L30 isolog
Length = 187
Score = 47.8 bits (112), Expect = 6e-06
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 1 MKVEIDSFSGAKIYPGRGTLFVRGDSKIFRFQSSKSASLFHQRKNPRRIAWTVLYRRHHK 60
M++E F IYPG LF+ D K+F F SK F ++ NPR++ T +++
Sbjct: 1 MRIEKCYFCSGPIYPGYDMLFIHNDCKVFGFCKSKCHKHFKKKCNPRKVRRTKPFQKAAG 60
Query: 61 KGITEEVA---RKRTRKSVKAQRAVVGASLELIKERRSLK 97
K +T + + K + +K QR + +++ +K +K
Sbjct: 61 KELTVDNSFEFDKHRNELIKYQRELWNKTIDAMKRVEEIK 100
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.129 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,870,400
Number of Sequences: 60738
Number of extensions: 169897
Number of successful extensions: 484
Number of sequences better than 1.0e-05: 21
Number of HSP's better than 0.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 460
Number of HSP's gapped (non-prelim): 21
length of query: 155
length of database: 30,389,216
effective HSP length: 97
effective length of query: 58
effective length of database: 24,497,630
effective search space: 1420862540
effective search space used: 1420862540
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)