ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV2880    suspect: LH   U     KOG2215  Intracellular trafficking, secretion, and vesicular transport  Exocyst complex subunit

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV2880 996736  998895 720  
         (720 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YBR102c [U] KOG2215 Exocyst complex subunit                           493   e-139

>YBR102c [U] KOG2215 Exocyst complex subunit
          Length = 753

 Score =  493 bits (1268), Expect = e-139
 Identities = 293/758 (38%), Positives = 441/758 (57%), Gaps = 45/758 (5%)

Query: 1   MVDFSLKK------HGVSSWGRGSLSRKESSAGDSSSTFKSSRYQDMKVSDPE----LPK 50
           MV+FSLKK      H   S    +  +   S        K + Y D+K  DP     LP 
Sbjct: 1   MVEFSLKKARNNWKHVKKSASSPAKQKTPPSPAKPKQKTKKNPYSDLK--DPATSYTLPT 58

Query: 51  VSAKERSKAGTMMKRRLSVHQSN------NFGAVKMDFDNMPALPSSAADYSFASNVGNA 104
           ++A+ERS+  T M+RRLS+H +N      ++     D  NM  +P+   D S  ++    
Sbjct: 59  INARERSRVATSMQRRLSIHNTNYAPPTLDYSMPLPDMPNM-IVPNDNVDSSHNNSSFTT 117

Query: 105 TQTSLITEDQLPDRNTSLASLNTN---------------TRRP---DQELYSSKSLRQIL 146
              S+ ++      N S A L+ N               T  P   +    +S SLR++L
Sbjct: 118 ENESVSSKGPSNSLNLSTADLSLNDSSYNKVPARSAMRNTVNPSGSNDPFNNSTSLRKML 177

Query: 147 SNPDFKAKKFITEKLGDATAVDIDQFTSNLNDLSLEIQDEIKFNIDKSFKEILIVNKGLE 206
           +NP F AK F+ +KLG+A+A+ ID+FTSNL DLS+++Q+E+K NI+KS+ EI+ VN  L 
Sbjct: 178 ANPHFNAKDFVHDKLGNASAITIDKFTSNLTDLSIQVQEEVKLNINKSYNEIMTVNNDLN 237

Query: 207 TATTELKVLRTKVQEMKDIMNQFVTIAEKKLQAEQAANET--ADLNRTXXXXXXXXXXXX 264
            A  ELK +R  + ++ ++++Q   IAEK+LQ +   ++    + N              
Sbjct: 238 VAMLELKRVRANINDLNEVLDQCTKIAEKRLQLQDQIDQERQGNFNNVESHSNSPALLPP 297

Query: 265 XXXXXTPSATRKDRTSVYILERMWNEELMTLFKNVDGAHKYITSTPGRHILLESDNWIEI 324
                  +  R+DR+SV ILE+ W+ EL  LFKNV+GA K+I ST GRHIL+ S NW+E+
Sbjct: 298 LKAGQNGNLMRRDRSSVLILEKFWDTELDQLFKNVEGAQKFINSTKGRHILMNSANWMEL 357

Query: 325 NPATLKPLQKVRLFILNDVVLIAAPKPSKQTELTVSRFSPLRDVTV--EVQSEHELSFNF 382
           N  T KPLQ V++FILND+VLIA     KQ +  VS+  PL+DVTV  E  S   L F F
Sbjct: 358 NTTTGKPLQMVQIFILNDLVLIADKSRDKQNDFIVSQCYPLKDVTVTQEEFSTKRLLFKF 417

Query: 383 SNKQHTLYRHRDPQVFSKVIDIIRQAKDALREISQAEEDTTRKIRNSYTLLQQ-ERTPNR 441
           SN   +LY  RD    S+++D+IR+AKD L +I   EE+ +++IR S+  LQ  ++TP R
Sbjct: 418 SNSNSSLYECRDADECSRLLDVIRKAKDDLCDIFHVEEENSKRIRESFRYLQSTQQTPGR 477

Query: 442 DATTSPVKVHGRQRSYGGTGTPSRHRSDAQNDALLTNITRSIHVRMGSEETTEVTXXXXX 501
           +   SP K   ++RS GG+ TP R+ + A +  LL N+T S+H R  S + +        
Sbjct: 478 ENNRSPNK--NKRRSMGGSITPGRNVTGAMDQYLLQNLTLSMHSRPRSRDMSSTAQRLKF 535

Query: 502 XXXXXXXXXXXIGRQNFDLAITKLNHIQSSLKSLYSSATFDESVMVELLSLKCSQRKTIL 561
                      + R  F+ A+  L  I+S L+ L    + +E +++ L+SLK  QR+  +
Sbjct: 536 LDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAI 595

Query: 562 YTKLTNLLACETSDMTKLKSYMLNLVALNEPVDALEVFLQNRSNFINDLTLQIGIIDNVT 621
            +KL+  +   ++++  LKS   N++ L  P  AL++FLQNRSNFI DL LQIG +DN T
Sbjct: 596 SSKLSQSIL-SSNEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIGSVDNPT 654

Query: 622 SFITQVAIIRFQTLKKVTQQYLEVSKNLKRDYTSLLVCWCSEEVDKHFQLMERELSNSST 681
           +++TQ+A+IRFQT+KK  + + ++ K L    +S+LV WCS+EVD HF+L++++L N   
Sbjct: 655 NYLTQLAVIRFQTIKKTVEDFQDIFKELGAKISSILVDWCSDEVDNHFKLIDKQLLNDEM 714

Query: 682 LSVQAIKITRKQIDELKPVGMDYVYKLDDFIRRNNNRI 719
           LS  +IK +RKQID LK VG+D+VYKLD+FI++N+++I
Sbjct: 715 LSPGSIKSSRKQIDGLKAVGLDFVYKLDEFIKKNSDKI 752


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.315    0.129    0.349 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,564,919
Number of Sequences: 60738
Number of extensions: 1439233
Number of successful extensions: 5108
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5101
Number of HSP's gapped (non-prelim): 1
length of query: 720
length of database: 30,389,216
effective HSP length: 114
effective length of query: 606
effective length of database: 23,465,084
effective search space: 14219840904
effective search space used: 14219840904
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)