ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2896 suspect: LH U KOG3691 Intracellular trafficking, secretion, and vesicular transport Exocyst complex subunit Sec8
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2896 1005693 1002640 -1018
(1018 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR055w [U] KOG3691 Exocyst complex subunit Sec8 671 0.0
>YPR055w [U] KOG3691 Exocyst complex subunit Sec8
Length = 1065
Score = 671 bits (1730), Expect = 0.0
Identities = 372/1047 (35%), Positives = 616/1047 (58%), Gaps = 43/1047 (4%)
Query: 1 MDHLQPVTRNRQRALSIRSTTEAEKEAMENSVAKLQADIALLGTEWNRIINKDTNPLELA 60
MD+L+P + R+R LSI S +E ++ AM +S+ LQ D+ + +WNRI++ +TNPLELA
Sbjct: 1 MDYLKPAQKGRRRGLSINSLSETQQSAMNSSLDHLQNDLNRINLQWNRILSDNTNPLELA 60
Query: 61 LRFLDETSVGLHHRFDEFIELKSRFAKDLQEVANDHYQAFNDSIASFSKTVYCITDAQDT 120
L FLD+TSVGL HR++EF +LKS+ LQ+V N+H Q FN ++AS+ K V I AQ+
Sbjct: 61 LAFLDDTSVGLGHRYEEFNQLKSQIGSHLQDVVNEHSQVFNTNVASYGKAVSSIMQAQEQ 120
Query: 121 LADIKNGVNNSLQKLSINDETLNDLNEDFMKQSRMISTLSAMEEVIKLNQKVEQSLLNSD 180
++KN + + +K++ + +L +LN++ +K ++MI L +EE++++ +K+E+++ +
Sbjct: 121 TLNLKNCLKEANEKITTDKGSLQELNDNNLKYTKMIDVLVNIEELLQIPEKIEENIRKEN 180
Query: 181 FTQAQEALNLGFTLAKEHDLWQLDVLKPVKEQFIXXXXXXXXXXXXGITEIVYSKQASHK 240
F Q Q L GF L L +++LKP+ +Q I +I+YSK S+K
Sbjct: 181 FHQVQILLERGFILMNNKSLKTVEILKPINQQLELQEHLLFNNLIEEIHDIMYSK--SNK 238
Query: 241 TDDQNMFAKTNNE---------DTFGSLENYLHHVIHEDISEESYRKNQLLLDFL--KKL 289
T N TNN+ + F SLENYL+++++ DI E S N+ L F+ + L
Sbjct: 239 T---NFTRVTNNDIFKIISISHNGFTSLENYLYNIVNIDIMEHSKTINKNLEQFIHDQSL 295
Query: 290 GQVYSEDDEFAVT----------EETDYDKMYTYMKTLNAMNKLSLAIDLLQKRSKNEIK 339
+ E A T E ++++ +KT+N +NKL +A +++ +R+K EI
Sbjct: 296 NKGNIMLQENAATQAPLAPSRNQENEGFNRIGFLLKTINNINKLPVAFNIITERAKEEIH 355
Query: 340 NIITKSVEDMRLKHPSLLKMTVSLQNSSTLGLSGQDILCVLIRRLFWEIFIKFLTAIQGH 399
NII KS E +R KHPSLLKM SL+N + GL QDIL +++R FWEIF+K L AIQ H
Sbjct: 356 NIIVKSTESIRSKHPSLLKMATSLKNDNHFGLPVQDILSIILRECFWEIFLKLLYAIQCH 415
Query: 400 RVLYETTKALQPPATSNVSYPFVEIWETCLRTIKDLIAMYTKDISITKDRRHKHR----T 455
R ++E + LQP +++ ++ F +IW L I+ L+ Y D + +
Sbjct: 416 RAIFEMSNILQPTSSAKPAFKFNKIWGKLLDEIELLLVRYINDPELISSNNGSIKPINGA 475
Query: 456 SSNLLQAKTSTETQLFSLQNNISKDNSSQLGHANELKAMLTDMFPGFALSTNVDLENIYL 515
++N ++FSL+ NI +DNSS A ELKA+L D+FPGF++S+N+DL++IY+
Sbjct: 476 TNNAPTLPKRKNPKIFSLEYNI-EDNSSVKDQAFELKALLKDIFPGFSVSSNMDLDSIYV 534
Query: 516 AEERFEDEDTLVPPTVFNMRMILESLLVFVQGSKDLLPPSLEDTTTSSTAFFLNVMEVEF 575
+E FE ++ LVPP+VFNM++IL+ L+F Q + ++P L T SS FF + M F
Sbjct: 535 KDESFEQDEPLVPPSVFNMKVILDPFLLFTQSTSTIVPSVLTQNTISSLTFFDDYMNKSF 594
Query: 576 LPQLNQTMNFLYESQVESNSPFAVETLFNGTPIFKSAIDFKMLYFKLLQTTNAGNFYRRN 635
LP++ TM++L+ +VESN+P+A+E IFK+A+DF+ L++ LL N N +R
Sbjct: 595 LPKIQMTMDYLFTVEVESNNPYALELSDENHNIFKTALDFQRLFYNLLNVFNTANTFREK 654
Query: 636 VAHMLVSIADKFXXXXXXXXXXXCGTQNTVVSKKLVSSWLTDKASGDITSKIFANDDEFI 695
+++ ++ + + F GT + +++K++++WL + D KI D+
Sbjct: 655 ISYCILDLLNHFYNYYLGLFNSLIGTSDRHLTRKIITAWLQNGILMDQEQKILNGDETLF 714
Query: 696 DAETLRLLNQCPRVFQERRSLEKTDHFSDSTIDTLVYFATTLEWISSWLPGIKKEVKDTD 755
E++ L + P +Q + L K+D F++ T+DT++ F+ ++ WI +WLPG+KK +
Sbjct: 715 HEESIELFKEIPHFYQAGKGLSKSDLFNNLTLDTILQFSASVLWILNWLPGLKKAI---- 770
Query: 756 NVSESSDKRKQANNAELRSMWSFFEVSEADLTDKG------GTTRFLLAADNLEEFEAVT 809
N+ E S + + LRS W+F E + + ++ G + LL ++F+
Sbjct: 771 NIDEVS-QEPMLDADRLRSSWTFSESMDLNYSNPSSSPNSLGNLKILLDDKASKKFDETI 829
Query: 810 QKFTNLHYLLLQSVRYDVRVRCLYYINCMLHSSR-WNPEVTSIELDENISSLVSDLSFLE 868
F L + L+ +R+++R C+Y I +++ WN +V SIELD+NI+SL+S+L E
Sbjct: 830 DGFKTLKFKLITILRFNIRALCIYDIGSFFQNTKIWNMDVGSIELDQNIASLISELRRTE 889
Query: 869 NKLRTSFAEDHSLLVFIGISNFMNHALISGSKSISVLNVHGAKKLLRNVNALQQACKSAT 928
+KL+ E +FIG+ N+ALI G+KSI VLN +G KK+LRNVN LQ A ++ +
Sbjct: 890 SKLKQQLPEKEKNSIFIGLDIVNNYALIKGAKSIKVLNHNGIKKMLRNVNVLQHAYRNLS 949
Query: 929 DGNDTEDLSKSITFFSICSMDEDSVLESFQKHELNGLSPDDLKSAFRLVFSEELQRQMKR 988
+++ ++ F+S+C E + E + +EL S +DLK+ RL FSEE+ RQ+KR
Sbjct: 950 SEPSKINMNVTMNFYSLCGSSEAELFEYIKDNELPHCSVEDLKTILRLQFSEEMHRQLKR 1009
Query: 989 KSSTNQRAISMSASKRLEDAIKKIDQM 1015
+S+++ + ++KR +A++K+ +
Sbjct: 1010 QSTSSTKGSIKPSNKRYTEALEKLSNL 1036
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.131 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,028,470
Number of Sequences: 60738
Number of extensions: 2174630
Number of successful extensions: 7485
Number of sequences better than 1.0e-05: 1
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 7479
Number of HSP's gapped (non-prelim): 1
length of query: 1018
length of database: 30,389,216
effective HSP length: 116
effective length of query: 902
effective length of database: 23,343,608
effective search space: 21055934416
effective search space used: 21055934416
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)