ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV2925 good E KOG1537 Amino acid transport and metabolism Homoserine kinase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV2925 1016739 1015660 -360
(360 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHR025w [E] KOG1537 Homoserine kinase 578 e-165
SPBC4C3.03 [E] KOG1537 Homoserine kinase 330 3e-90
At2g17265 [E] KOG1537 Homoserine kinase 77 3e-14
>YHR025w [E] KOG1537 Homoserine kinase
Length = 357
Score = 578 bits (1490), Expect = e-165
Identities = 286/354 (80%), Positives = 308/354 (86%)
Query: 1 MGRSFKISVPASSANIGPGYDVLGIGLALFLTLEVNIDSKNAALTNDDRNNCKLSYTPES 60
M R+FKI VPASSANIGPGYDVLG+GL+LFL L+V IDS A TNDD NNCKLSYT ES
Sbjct: 1 MVRAFKIKVPASSANIGPGYDVLGVGLSLFLELDVTIDSSQAQETNDDPNNCKLSYTKES 60
Query: 61 DGYSTVPLASDENLITRTALYVLRCSGIRTFPSGTQILVNNPIPLGRGLXXXXXXXXXXX 120
+GYSTVPL SD NLITRTALYVLRC+ IR FPSGT++ V+NPIPLGRGL
Sbjct: 61 EGYSTVPLRSDANLITRTALYVLRCNNIRNFPSGTKVHVSNPIPLGRGLGSSGAAVVAGV 120
Query: 121 MLANEVGQLNFPKQRMLDYCLMIERHPDNITAAMMGGFVGSFLRDLTPQEVERREIPLAE 180
+L NEV QL F KQRMLDYCLMIERHPDNITAAMMGGF GSFLRDLTPQEVERREIPLAE
Sbjct: 121 ILGNEVAQLGFSKQRMLDYCLMIERHPDNITAAMMGGFCGSFLRDLTPQEVERREIPLAE 180
Query: 181 VLPEPSGGEDTGLVPPLPPTDIGRHVKYNWNNKIKCIAIIPDFELSTSDSRGVLPQAYTT 240
VLPEPSGGEDTGLVPPLPPTDIGRHVKY WN IKCIAIIP FELST+DSRGVLP+AY T
Sbjct: 181 VLPEPSGGEDTGLVPPLPPTDIGRHVKYQWNPAIKCIAIIPQFELSTADSRGVLPKAYPT 240
Query: 241 KDLVFNLQRLAVLTTALTLDPPNPDLIYPAMQDRVHQPYRKTLIPGLTDILSSVTPKTHP 300
+DLVFNLQRLAVLTTALT+DPPN DLIYPAMQDRVHQPYRKTLIPGLT+ILS VTP T+P
Sbjct: 241 QDLVFNLQRLAVLTTALTMDPPNADLIYPAMQDRVHQPYRKTLIPGLTEILSCVTPSTYP 300
Query: 301 GLLGICLSGAGPTILALATENFENIALEIINRFSKNKVTCTWRLLDLATDGAQV 354
GLLGICLSGAGPTILALATENFE I+ EIINRF+KN + C+W+LL+ A DGA V
Sbjct: 301 GLLGICLSGAGPTILALATENFEEISQEIINRFAKNGIKCSWKLLEPAYDGASV 354
>SPBC4C3.03 [E] KOG1537 Homoserine kinase
Length = 338
Score = 330 bits (845), Expect = 3e-90
Identities = 173/354 (48%), Positives = 234/354 (65%), Gaps = 18/354 (5%)
Query: 3 RSFKISVPASSANIGPGYDVLGIGLALFLTLEVNIDSKNAALTNDDRNNCKLSYTPESDG 62
+ F+I VPASSANIGPG+DVLG+ L ++TL+V + +++ C L+Y E DG
Sbjct: 2 QKFQIKVPASSANIGPGFDVLGMSLEEYMTLDVEVSTESGP--------CVLTY--EGDG 51
Query: 63 YSTVPLASDENLITRTALYVLRCSGIRTFPSGTQILVNNPIPLGRGLXXXXXXXXXXXML 122
V L +N+IT+T+LYVLRC+ I TFP T+I V NPIPLGRG+ ML
Sbjct: 52 KEHVSLDVQKNMITQTSLYVLRCNNISTFPYATKIHVINPIPLGRGMGSSGSAAIAGVML 111
Query: 123 ANEVGQLNFPKQRMLDYCLMIERHPDNITAAMMGGFVGSFLRDLTPQEVERREIPLAEVL 182
ANE+ +L K +M+DY LMIERHPDN+ A+MMGGFVGSFLR+L+ +E ++L
Sbjct: 112 ANEIAKLGLSKLQMMDYVLMIERHPDNVMASMMGGFVGSFLRELSEEEKNAFSPSADDLL 171
Query: 183 PEPSGGEDTGLVPPLPPTDIGRHVKYNWNNKIKCIAIIPDFELSTSDSRGVLPQAYTTKD 242
+ LPP +G + W +++K I +IP+F L+TS +R VLP +Y D
Sbjct: 172 KNEA--------LTLPPKSLGTFARLPWASELKAIVVIPEFHLATSKARSVLPTSYGRTD 223
Query: 243 LVFNLQRLAVLTTALTLDPPNPDLIYPAMQDRVHQPYRKTLIPGLTDILSSVTPKTHPGL 302
+V+NLQRLA+LTTAL P NP L+Y M+D+VHQPYR +LIPGL +IL+++ P T PGL
Sbjct: 224 VVYNLQRLALLTTALGQTPINPHLVYEVMKDKVHQPYRASLIPGLQNILATLNPDTQPGL 283
Query: 303 LGICLSGAGPTILALATENFENIALEIINRFSKNKVTCTWRLLDLATDGAQVMH 356
GICLSGAGPT+LALAT NF+ IA +++ F K+ V C + +L A DGA V +
Sbjct: 284 CGICLSGAGPTVLALATGNFDEIAHAMLSIFEKHGVKCRYLVLSPAFDGATVKY 337
>At2g17265 [E] KOG1537 Homoserine kinase
Length = 370
Score = 77.4 bits (189), Expect = 3e-14
Identities = 85/342 (24%), Positives = 137/342 (39%), Gaps = 60/342 (17%)
Query: 4 SFKISVPASSANIGPGYDVLGI---GLALFLTLEVNIDSKNAALTNDDRNNCKLSYTPES 60
S K PA+ AN+GPG+D LG GL +TL V+ + ++ + T +
Sbjct: 53 SVKTFAPATVANLGPGFDFLGCAVDGLGDHVTLRVDPSVRAGEVSISE-------ITGTT 105
Query: 61 DGYSTVPLASDENLITRTALYVLRCSGIRTFPSGTQILVNNPIPLGRGLXXXXXXXXXXX 120
ST PL N A+ ++ GIR+ G + ++ +PLG GL
Sbjct: 106 TKLSTNPL---RNCAGIAAIATMKMLGIRSV--GLSLDLHKGLPLGSGLGSSAASAAAAA 160
Query: 121 MLANEVGQLNFPKQRMLDYCLMIER-----HPDNITAAMMGGFVGSFLRDLTPQEVERRE 175
+ NE+ +++ L E H DNI A+MGGFV
Sbjct: 161 VAVNEIFGRKLGSDQLVLAGLESEAKVSGYHADNIAPAIMGGFV---------------- 204
Query: 176 IPLAEVLPEPSGGEDTGLVPPLPPTDIGRHVKYNWNNKIKCIAIIPDFELSTSDSRGVLP 235
L+ P D+ + +++ + + + + PDFE T R LP
Sbjct: 205 -----------------LIRNYEPLDL-KPLRFPSDKDLFFVLVSPDFEAPTKKMRAALP 246
Query: 236 QAYTTKDLVFNLQRLAVLTTALTLDPPNPDLIYPAMQDRVHQPYRKTLIPGLTDILSSVT 295
V+N + A L A+ L+ L D++ +P R LIPG+ + +
Sbjct: 247 TEIPMVHHVWNSSQAAALVAAV-LEGDAVMLGKALSSDKIVEPTRAPLIPGMEAVKKAA- 304
Query: 296 PKTHPGLLGICLSGAGPTILAL--ATENFENIALEIINRFSK 335
G G +SGAGPT +A+ + E + I +++ F K
Sbjct: 305 --LEAGAFGCTISGAGPTAVAVIDSEEKGQVIGEKMVEAFWK 344
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.138 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,577,271
Number of Sequences: 60738
Number of extensions: 994849
Number of successful extensions: 2142
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 2133
Number of HSP's gapped (non-prelim): 4
length of query: 360
length of database: 30,389,216
effective HSP length: 108
effective length of query: 252
effective length of database: 23,829,512
effective search space: 6005037024
effective search space used: 6005037024
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)