ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV3000 suspect: HSP Y KOG2196 Nuclear structure Nuclear porin
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV3000 1043614 1041275 -780
(780 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJL041w_2 [Y] KOG2196 Nuclear porin 221 3e-57
YJL041w_1 [YU] KOG4719 Nuclear pore complex protein 189 1e-47
SPAC26A3.15c [Y] KOG2196 Nuclear porin 165 2e-40
Hs6912544 [Y] KOG2196 Nuclear porin 120 1e-26
Hs7705355 [Y] KOG2196 Nuclear porin 119 2e-26
YLR335w_1 [YU] KOG4719 Nuclear pore complex protein 99 2e-20
YOR098c [YU] KOG4719 Nuclear pore complex protein 84 1e-15
7302936 [Y] KOG2196 Nuclear porin 82 4e-15
SPAC30D11.04c [YU] KOG4719 Nuclear pore complex protein 79 3e-14
Hs4826872 [YU] KOG4719 Nuclear pore complex protein 72 4e-12
CE10988_1 [YU] KOG0845 Nuclear pore complex Nup98 component (sc ... 72 4e-12
SPAC1486.05 [YU] KOG0845 Nuclear pore complex Nup98 component (s... 71 6e-12
7299479 [R] KOG1721 FOG: Zn-finger 69 4e-11
YKR092c [Y] KOG2992 Nucleolar GTPase/ATPase p130 65 4e-10
CE05198 [YU] KOG3630 Nuclear pore complex Nup214/CAN component 64 1e-09
At1g59660 [YU] KOG0845 Nuclear pore complex Nup98 component (sc ... 60 1e-08
Hs8923135 [Y] KOG2196 Nuclear porin 59 3e-08
7293246 [YU] KOG4719 Nuclear pore complex protein 58 5e-08
At1g10390 [YU] KOG0845 Nuclear pore complex Nup98 component (sc ... 58 6e-08
CE08376 [Y] KOG2992 Nucleolar GTPase/ATPase p130 53 2e-06
At3g10650 [YU] KOG0845 Nuclear pore complex Nup98 component (sc ... 53 2e-06
YIL115c [YU] KOG3630 Nuclear pore complex Nup214/CAN component 53 2e-06
7296503 [Y] KOG2992 Nucleolar GTPase/ATPase p130 53 2e-06
7296502 [Y] KOG2992 Nucleolar GTPase/ATPase p130 53 2e-06
SPBC1711.05 [Y] KOG2992 Nucleolar GTPase/ATPase p130 52 5e-06
>YJL041w_2 [Y] KOG2196 Nuclear porin
Length = 233
Score = 221 bits (563), Expect = 3e-57
Identities = 116/234 (49%), Positives = 148/234 (62%), Gaps = 7/234 (2%)
Query: 550 GLKPDTTKETTESAXXXXXXXXXXXXXXXX------IEPVSLDNKTLDDLVSKWTSQLSG 603
G + D K+T ES+ ++PVSLDNKTLDDLV+KWT+QL+
Sbjct: 1 GAQKDNEKKTEESSTGKSTADVKSSDSLKLNSKPVELKPVSLDNKTLDDLVTKWTNQLTE 60
Query: 604 TADHFESYAKKINQWDKVLMQGGEQISRLYSDTLTAEQSQNRVDQSLSYIERQQSELEYF 663
+A HFE Y KKIN WD+VL++GGEQIS+LYSD + AE SQN++DQSL YIERQQ ELE F
Sbjct: 61 SASHFEQYTKKINSWDQVLVKGGEQISQLYSDAVMAEHSQNKIDQSLQYIERQQDELENF 120
Query: 664 LDSYEQKAEDLLSEVLXXXXXXXXXXXXDQKRQQAYHTVEMXXXXXXXXXXXXXXXITEI 723
LD++E K E LLS+V+ DQKRQQAY T + I EI
Sbjct: 121 LDNFETKTEALLSDVV-STSSGAAANNNDQKRQQAYKTAQTLDENLNSLSSNLSSLIVEI 179
Query: 724 NEVSETFNKATNSSFPNKEENAQLIQLLNSHLDALKSLENNSQQLEGKLKTLTK 777
N VS TFNK TN N++EN QLI++LNSH DAL+SL++NS LE ++ ++ K
Sbjct: 180 NNVSNTFNKTTNIDINNEDENIQLIKILNSHFDALRSLDDNSTSLEKQINSIKK 233
>YJL041w_1 [YU] KOG4719 Nuclear pore complex protein
Length = 590
Score = 189 bits (481), Expect = 1e-47
Identities = 175/518 (33%), Positives = 232/518 (44%), Gaps = 99/518 (19%)
Query: 76 TQQGNAF--SAFGATTTNDNGQTKPAFGGFGMNTQQGANAVKPAASPFSFGASNTTAGTG 133
T GN F S+ +TN N TKPAFGG G N P+++ + ++N T
Sbjct: 117 TAGGNTFGSSSLFNNSTNSN-TTKPAFGGLNFG---GGNNTTPSSTGNANTSNNLFGATA 172
Query: 134 DAPKPAFGGFXXXXXXXXXXXXXXXXXXXXXXKPTXXXXXXXXXXXXXXXXXXXXQQAKD 193
+A KPAF K
Sbjct: 173 NANKPAFS------------------------------------------FGATTNDDKK 190
Query: 194 TQP-KSGFSFGTQPEQKTDAKP---AFNFG--LSGNNAMTTTPSVNASKPIFGANXXXXX 247
T+P K FSF + KTDA+ F+FG L GN + + S FG+
Sbjct: 191 TEPDKPAFSFNSSVGNKTDAQAPTTGFSFGSQLGGNKTVNEAAKPSLS---FGSGSAGAN 247
Query: 248 XXXXXAKPTETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSA-----AGDANKPSFSLS 302
T++P A S FG +D K T F+FG+ AG +KP+FS
Sbjct: 248 PAGASQPEPTTNEPAKPALS-FGTATSDNKTTNTTPSFSFGAKSDENKAGATSKPAFSF- 305
Query: 303 LGSKPEEKT--SGAKTGFSFGSKTEDKPTD--AKPAFSFGAKPS--GTEQAGKPAFSFGS 356
G+KPEEK + +K FSFG+K+ + D AKPAFSFGAKP+ + KPAFSFG+
Sbjct: 306 -GAKPEEKKDDNSSKPAFSFGAKSNEDKQDGTAKPAFSFGAKPAEKNNNETSKPAFSFGA 364
Query: 357 KPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEE--TKSGFSLGSKTEESKP--ASKMGFS 412
K S D SK F+F K +K +K FS G+K EE K +SK FS
Sbjct: 365 K------SDEKKDGDASKPAFSFGAKPDENKASATSKPAFSFGAKPEEKKDDNSSKPAFS 418
Query: 413 LGSL-NTNADDTESKPGFSFGNKT--EDTKSASKAAFSFDNKTDGSKS--ESKPSFALGS 467
G+ N + D +KP FSFG K ++ SK AFSF K+D K SKP+F+ G+
Sbjct: 419 FGAKSNEDKQDGTAKPAFSFGAKPAEKNNNETSKPAFSFGAKSDEKKDGDASKPAFSFGA 478
Query: 468 NTSENKADPS--PAFSLGAXXXXXXXXXXXXXXXXAFSFGSKPADSRTSDTKVDSKPAFS 525
+ E K S PAFS G AFSFG+KP + + + SKPAFS
Sbjct: 479 KSDEKKDSDSSKPAFSFGTKSNEKKDSGSSKP---AFSFGAKPDEKKNDEV---SKPAFS 532
Query: 526 FGSKPAETTASKDTKTEAPSFSLGGLKPDTTKETTESA 563
FG+K E S ++K+ +FS G KP T KE + A
Sbjct: 533 FGAKANEKKESDESKS---AFSFGS-KP-TGKEEGDGA 565
Score = 180 bits (457), Expect = 7e-45
Identities = 168/509 (33%), Positives = 220/509 (43%), Gaps = 99/509 (19%)
Query: 52 FGNTGGQTXXXXXXXXXXXXXXXXTQQGN--AFSAFGATTTNDNGQTKPAFGGFGMNTQQ 109
FG T T N AFS FGATT ND+ +T+P F N+
Sbjct: 147 FGGGNNTTPSSTGNANTSNNLFGATANANKPAFS-FGATT-NDDKKTEPDKPAFSFNSSV 204
Query: 110 GANA-VKPAASPFSFGA---SNTTAGTGDAPKPAFGGFXXXXXXXXXXXXXXXXXXXXXX 165
G + + FSFG+ N T P +FG
Sbjct: 205 GNKTDAQAPTTGFSFGSQLGGNKTVNEAAKPSLSFG--SGSAGANPAGASQPEPTTNEPA 262
Query: 166 KPTXXXXXXXXXXXXXXXXXXXXQQAKDTQPKSG------FSFGTQPEQKTD---AKPAF 216
KP AK + K+G FSFG +PE+K D +KPAF
Sbjct: 263 KPALSFGTATSDNKTTNTTPSFSFGAKSDENKAGATSKPAFSFGAKPEEKKDDNSSKPAF 322
Query: 217 NFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKPTETSKPNTNATSLFGGNHTDT 276
+FG N +KP F AKP E N N TS
Sbjct: 323 SFGAKSNE----DKQDGTAKPAF----------SFGAKPAE---KNNNETS--------- 356
Query: 277 KPAGATSGFNFGSAA-----GDANKPSFSLSLGSKPEEKTSGA--KTGFSFGSKTEDKPT 329
KPA F+FG+ + GDA+KP+F S G+KP+E + A K FSFG+K E+K
Sbjct: 357 KPA-----FSFGAKSDEKKDGDASKPAF--SFGAKPDENKASATSKPAFSFGAKPEEKKD 409
Query: 330 D--AKPAFSFGAKPSGTEQAG--KPAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSGN 385
D +KPAFSFGAK + +Q G KPAFSFG+KP N+ SK F+F KS
Sbjct: 410 DNSSKPAFSFGAKSNEDKQDGTAKPAFSFGAKPA------EKNNNETSKPAFSFGAKSDE 463
Query: 386 SK--EETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFGNKTEDTK--SA 441
K + +K FS G+K++E K D SKP FSFG K+ + K +
Sbjct: 464 KKDGDASKPAFSFGAKSDEKK----------------DSDSSKPAFSFGTKSNEKKDSGS 507
Query: 442 SKAAFSFDNKTDGSKSE--SKPSFALGSNTSENKA--DPSPAFSLGAXXXXXXXXXXXXX 497
SK AFSF K D K++ SKP+F+ G+ +E K + AFS G+
Sbjct: 508 SKPAFSFGAKPDEKKNDEVSKPAFSFGAKANEKKESDESKSAFSFGS---KPTGKEEGDG 564
Query: 498 XXXAFSFGSKPADSRTSDTKVDSKPAFSF 526
A SFG+KP + ++SDT SKPAF+F
Sbjct: 565 AKAAISFGAKPEEQKSSDT---SKPAFTF 590
Score = 158 bits (400), Expect = 3e-38
Identities = 140/425 (32%), Positives = 192/425 (44%), Gaps = 84/425 (19%)
Query: 211 DAKPAFNFGLSGNNAMTTTPSVNASKPIFGA--------------NXXXXXXXXXXAKPT 256
++ P N S N+ T S +A +FG+ N + +
Sbjct: 76 NSNPTSNVFGSNNSTTNTFGSNSAGTSLFGSSSAQQTKSNGTAGGNTFGSSSLFNNSTNS 135
Query: 257 ETSKPNTNATSLFGGNHTDTKPAG-ATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAK 315
T+KP + GGN+T G A + N A +ANKP+FS + ++KT K
Sbjct: 136 NTTKPAFGGLNFGGGNNTTPSSTGNANTSNNLFGATANANKPAFSFGATTNDDKKTEPDK 195
Query: 316 TGFSFGSKTEDKPTDAK---PAFSFGAKPSGTE---QAGKPAFSFGS------------- 356
FSF S +K TDA+ FSFG++ G + +A KP+ SFGS
Sbjct: 196 PAFSFNSSVGNK-TDAQAPTTGFSFGSQLGGNKTVNEAAKPSLSFGSGSAGANPAGASQP 254
Query: 357 KPVAPEPSKPS---------NDKPESKQGFAFNVKSGNSK--EETKSGFSLGSKTEE--- 402
+P EP+KP+ N + F+F KS +K +K FS G+K EE
Sbjct: 255 EPTTNEPAKPALSFGTATSDNKTTNTTPSFSFGAKSDENKAGATSKPAFSFGAKPEEKKD 314
Query: 403 ---SKPA---------------SKMGFSLGSLNTNADDTE-SKPGFSFGNKTEDTK--SA 441
SKPA +K FS G+ ++ E SKP FSFG K+++ K A
Sbjct: 315 DNSSKPAFSFGAKSNEDKQDGTAKPAFSFGAKPAEKNNNETSKPAFSFGAKSDEKKDGDA 374
Query: 442 SKAAFSFDNKTDGSKSE--SKPSFALGSNTSENKADPS--PAFSLGAXXXXXXXXXXXXX 497
SK AFSF K D +K+ SKP+F+ G+ E K D S PAFS GA
Sbjct: 375 SKPAFSFGAKPDENKASATSKPAFSFGAKPEEKKDDNSSKPAFSFGA---KSNEDKQDGT 431
Query: 498 XXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSFSLGGLKPDTTK 557
AFSFG+KPA+ ++T SKPAFSFG+K E KD P+FS G K D K
Sbjct: 432 AKPAFSFGAKPAEKNNNET---SKPAFSFGAKSDE---KKDGDASKPAFSFGA-KSDEKK 484
Query: 558 ETTES 562
++ S
Sbjct: 485 DSDSS 489
>SPAC26A3.15c [Y] KOG2196 Nuclear porin
Length = 598
Score = 165 bits (418), Expect = 2e-40
Identities = 162/616 (26%), Positives = 248/616 (39%), Gaps = 110/616 (17%)
Query: 198 SGFSFGTQPEQKTDAKPAFNFG---LSGN--NAMTTTP---------SVNASKPIFGANX 243
SG FG+ T A F+FG +GN NA T++P + +KP+FG
Sbjct: 50 SGGLFGSNNASNTSAPSTFSFGKAATTGNSTNASTSSPFSFGSTNTNNTAGAKPLFGGLG 109
Query: 244 XXXXXXXXXAKPTETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSL 303
K T+ T A + T P+G+T FNFGS+ N F
Sbjct: 110 STGSANSTGDKSKNTASSATGAAT--------TNPSGST--FNFGSSNNSFN---FGKPA 156
Query: 304 GSKPEEKTSGAKTGFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEP 363
+ + A TG FG T P S S T G FSFG KP +
Sbjct: 157 STTNTTTPAAASTGSLFGKPAATGTTSNAPPAS---STSTTPATGSGGFSFG-KPASLGS 212
Query: 364 SKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSK---TEESKPASK-------MGFSL 413
+ ++ + GF+F + S + + + S T +SKPA+ GFS
Sbjct: 213 TNNASTSTTANSGFSFGKPATTSAPGSNTTVTPSSSITGTNDSKPAASNTGSAPTTGFSF 272
Query: 414 GSLNTNADDTESKPG----------FSFGNK--TEDTKSASKAAFSFDNKTDGSKSESKP 461
G A T + G FSFG TEDT + +F K S ++KP
Sbjct: 273 GKPAGQAASTATDKGTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAF-TKPATSTGDNKP 331
Query: 462 SFALGSNTSENKADPSPAFSLGAXXXXXXXXXXXXXXXXAFSFGSKPADSRTSDTKVDSK 521
+F+ G+ + + + A S FSFG KPA T+ T SK
Sbjct: 332 TFSFGNTSKPTENTSTTATSAPPLSNNTKPAEGANQTSSGFSFG-KPATDTTTST---SK 387
Query: 522 PAFSFGSKPAETTASKDTKTEAPSFSLGGLKPDTTKETTESAXXXXXXXXXXXXXXXXIE 581
FG+KPA+ +A KP T TT S
Sbjct: 388 TGPLFGNKPADPSA----------------KPGATASTTPSEP----------------P 415
Query: 582 PVSLDNKTLDDLVSKWTSQLSGTADHFESYAKKINQWDKVLMQGGEQISRLYSDTLTAEQ 641
P S+ +KTL ++++KW++ L+ + F +++ WD+ L+ G IS+LY++T+ AEQ
Sbjct: 416 PSSIKHKTLQEILNKWSTDLTTQTEVFNKLCDQVSDWDRTLVDNGALISKLYTETVEAEQ 475
Query: 642 SQNRVDQSLSYIERQQSELEYFLDSYEQKAEDLLSEVLXXXXXXXXXXXXDQKRQQAYHT 701
NR+D L Y+ Q EL LDSYE + E + +R++A+
Sbjct: 476 MSNRIDDGLEYVSSSQQELFKLLDSYETQLE---------TFDGRATSALNVERERAFGV 526
Query: 702 VEMXXXXXXXXXXXXXXXITEINEVSETFNKATNSSFPNKEENAQLIQLLNSHLDALKSL 761
+ I ++N+ F+K +S ++++++LN+ L +L +
Sbjct: 527 ADDILSRLDRLGEDLGTVINQMND----FSKPDDSI-------SEIVKVLNAQLASLGWV 575
Query: 762 ENNSQQLEGKLKTLTK 777
EN Q+E KL T+ K
Sbjct: 576 ENRIFQMEEKLDTIKK 591
Score = 99.4 bits (246), Expect = 2e-20
Identities = 113/394 (28%), Positives = 150/394 (37%), Gaps = 104/394 (26%)
Query: 84 AFGATTTNDNGQTKPAFGGFG---------------MNTQQGANAVKPAASPFSFGASNT 128
+FG+T TN+ KP FGG G ++ GA P+ S F+FG+SN
Sbjct: 89 SFGSTNTNNTAGAKPLFGGLGSTGSANSTGDKSKNTASSATGAATTNPSGSTFNFGSSNN 148
Query: 129 TAGTGDAPKPAFGGFXXXXXXXXXXXXXXXXXXXXXXKPTXXXXXXXXXXXXXXXXXXXX 188
+ G KPA KP
Sbjct: 149 SFNFG---KPA--------STTNTTTPAAASTGSLFGKPAATGTTSNAPPASSTSTT--- 194
Query: 189 QQAKDTQPKSGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXX 248
GFSFG KPA + G + N + +TT + S FG
Sbjct: 195 ----PATGSGGFSFG---------KPA-SLGSTNNASTSTTANSGFS---FG-------- 229
Query: 249 XXXXAKPTETSKPNTNAT-----SLFGGNHTDTKPAGA------TSGFNFGSAAGDANKP 297
KP TS P +N T S+ G N D+KPA + T+GF+FG AG A
Sbjct: 230 -----KPATTSAPGSNTTVTPSSSITGTN--DSKPAASNTGSAPTTGFSFGKPAGQA--- 279
Query: 298 SFSLSLGSKPEEKTSGAKTGFSFG--SKTED--KPTDAKPAFSFGAKPSGTEQAGKPAFS 353
+ + K TS A TGFSFG + TED KPT AF+ KP+ + KP FS
Sbjct: 280 --ASTATDKGTTTTSSAGTGFSFGKPATTEDTNKPTAPNSAFT---KPATSTGDNKPTFS 334
Query: 354 FGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSL 413
FG+ +P++ ++ S + N K +T SGFS G KPA
Sbjct: 335 FGN---TSKPTENTSTTATSAPPLSNNTKPAEGANQTSSGFSFG------KPA------- 378
Query: 414 GSLNTNADDTESKPGFSFGNKTEDTKSASKAAFS 447
T+ + SK G FGNK D + A S
Sbjct: 379 ----TDTTTSTSKTGPLFGNKPADPSAKPGATAS 408
>Hs6912544 [Y] KOG2196 Nuclear porin
Length = 522
Score = 120 bits (300), Expect = 1e-26
Identities = 139/589 (23%), Positives = 220/589 (36%), Gaps = 103/589 (17%)
Query: 196 PKSGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKP 255
P GF+FGT T F+F SG T N P A
Sbjct: 12 PTGGFTFGTAKTATTTPATGFSFSTSG------TGGFNFGAPFQPA-------------- 51
Query: 256 TETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAK 315
TS P+T SL T T PA T+GF FG+A + FSL +G+ ++ A
Sbjct: 52 --TSTPSTGLFSLA----TQT-PATQTTGFTFGTATLASGGTGFSLGIGASKLNLSNTAA 104
Query: 316 T-------GFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSN 368
T GF GS + S G P+G F FG + P+ S
Sbjct: 105 TPAMANPSGFGLGSSNLTNAISSTVTSSQGTAPTG--------FVFGPSTTSVAPATTSG 156
Query: 369 DKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPG 428
GF+F +G S + SGF++GS ++P + T + P
Sbjct: 157 -------GFSF---TGGSTAQP-SGFNIGSAGNSAQPTAPATLPF---------TPATPA 196
Query: 429 FSFGNKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXX 488
+ T+ A + + + + P+ S+ + + +P + GA
Sbjct: 197 ATTAGATQPAAPTPTATITSTGPSLFASIATAPT----SSATTGLSLCTPVTTAGAPTAG 252
Query: 489 XXXXXXXXXXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSFSL 548
FS + A S TS T S A TA+ T + F+L
Sbjct: 253 TQ----------GFSLKAPGAASGTSTTT----------STAATATATTTTSSSTTGFAL 292
Query: 549 GGLKPDTTKETTESAXXXXXXXXXXXXXXXXIEPVSLDNKTLDDLVSKWTSQLSGTADHF 608
LKP + ++ L+ L++KW+ +L HF
Sbjct: 293 N-LKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQLESLINKWSLELEDQERHF 351
Query: 609 ESYAKKINQWDKVLMQGGEQISRLYSDTLTAEQSQNRVDQSLSYIERQQSELEYFLDSYE 668
A ++N WD+ L++ GE+I+ L+ + + Q R+DQ L +I QQ ELE L
Sbjct: 352 LQQATQVNAWDRTLIENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSP-- 409
Query: 669 QKAEDLLSEVLXXXXXXXXXXXXDQKRQQAYHTVEMXXXXXXXXXXXXXXXITEINEVSE 728
L E++ D++RQ+ Y E I +N
Sbjct: 410 ------LEELVKEQRATIYLQHADEERQKTYKLAENIDAQLKRMAQDLKDIIEHLN---- 459
Query: 729 TFNKATNSSFPNKEENAQLIQLLNSHLDALKSLENNSQQLEGKLKTLTK 777
T ++S P + Q+ ++LN+H+D+L+ ++ NS L+ K++ +TK
Sbjct: 460 TSGAPADTSDPLQ----QICKILNAHMDSLQWIDQNSALLQRKVEEVTK 504
>Hs7705355 [Y] KOG2196 Nuclear porin
Length = 522
Score = 119 bits (297), Expect = 2e-26
Identities = 138/589 (23%), Positives = 220/589 (36%), Gaps = 103/589 (17%)
Query: 196 PKSGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKP 255
P GF+FGT T F+F SG T N P A
Sbjct: 12 PTGGFTFGTAKTATTTPATGFSFSTSG------TGGFNFGAPFQPA-------------- 51
Query: 256 TETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAK 315
TS P+T SL T T PA T+GF FG+A + FSL +G+ ++ A
Sbjct: 52 --TSTPSTGLFSLA----TQT-PATQTTGFTFGTATLASGGTGFSLGIGASKLNLSNTAA 104
Query: 316 T-------GFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSN 368
T GF GS + S G P+G F FG + P+ S
Sbjct: 105 TPAMANPSGFGLGSSNLTNAISSTVTSSQGTAPTG--------FVFGPSTTSVAPATTSG 156
Query: 369 DKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPG 428
GF+F +G S + SGF++GS ++P + T + P
Sbjct: 157 -------GFSF---TGGSTAQP-SGFNIGSAGNSAQPTAPATLPF---------TPATPA 196
Query: 429 FSFGNKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXX 488
+ T+ A + + + + P+ S+ + + +P + GA
Sbjct: 197 ATTAGATQPAAPTPTATITSTGPSLFASIATAPT----SSATTGLSLCTPVTTAGAPTAG 252
Query: 489 XXXXXXXXXXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSFSL 548
FS + A S TS T S A TA+ T + F+L
Sbjct: 253 TQ----------GFSLKAPGAASGTSTTT----------STAATATATTTTSSSTTGFAL 292
Query: 549 GGLKPDTTKETTESAXXXXXXXXXXXXXXXXIEPVSLDNKTLDDLVSKWTSQLSGTADHF 608
LKP + ++ L+ L++KW+ +L HF
Sbjct: 293 N-LKPLAPAGIPSNTAAAVTAPPGPGAAAGAAASSAMTYAQLESLINKWSLELEDQERHF 351
Query: 609 ESYAKKINQWDKVLMQGGEQISRLYSDTLTAEQSQNRVDQSLSYIERQQSELEYFLDSYE 668
A ++N WD+ L++ GE+I+ L+ + + Q R+DQ L +I QQ ELE L
Sbjct: 352 LQQATQVNAWDRTLIENGEKITSLHREVEKVKLDQKRLDQELDFILSQQKELEDLLSP-- 409
Query: 669 QKAEDLLSEVLXXXXXXXXXXXXDQKRQQAYHTVEMXXXXXXXXXXXXXXXITEINEVSE 728
L E++ D++R++ Y E I +N
Sbjct: 410 ------LEELVKEQSGTIYLQHADEEREKTYKLAENIDAQLKRMAQDLKDIIEHLN---- 459
Query: 729 TFNKATNSSFPNKEENAQLIQLLNSHLDALKSLENNSQQLEGKLKTLTK 777
T ++S P + Q+ ++LN+H+D+L+ ++ NS L+ K++ +TK
Sbjct: 460 TSGAPADTSDPLQ----QICKILNAHMDSLQWIDQNSALLQRKVEEVTK 504
>YLR335w_1 [YU] KOG4719 Nuclear pore complex protein
Length = 556
Score = 99.4 bits (246), Expect = 2e-20
Identities = 92/352 (26%), Positives = 144/352 (40%), Gaps = 41/352 (11%)
Query: 205 QPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKPTETSKPNTN 264
+ + +T+AKP F+F ++A +TT + P+ K +
Sbjct: 237 EKKTETNAKP-FSF----SSATSTTEQTKSKNPL---------SLTEATKTNVDNNSKAE 282
Query: 265 ATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAKTGFSFGSKT 324
A+ FG H S F FG AA + S + GS EK + + + +
Sbjct: 283 ASFTFGTKHAADSQNNKPS-FVFGQAAAKPSLEKSSFTFGSTTIEKKNDENSTSNSKPEK 341
Query: 325 EDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSG 384
D+ P+FSF T A KP+FSFG P SK KP F+F +
Sbjct: 342 SSDSNDSNPSFSFSIPSKNTPDASKPSFSFG----VPNSSKNETSKPV----FSFGAATP 393
Query: 385 NSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFG--NKTEDTKSAS 442
++KE ++ + + SKPA + + G+ +SKP FSFG N +E S
Sbjct: 394 SAKEASQEDDNNNVEKPSSKPAFNLISNAGTEKEKESKKDSKPAFSFGISNGSESKDSDK 453
Query: 443 KAAFSFDNKTDGSKSESKPSFALGSNTSENKA--DPSPAFSLGAXXXXXXXXXXXXXXXX 500
+ S + + K +KP+F+ G NT+ K +P F+ G+
Sbjct: 454 PSLPSAVDGENDKKEATKPAFSFGINTNTTKTADTKAPTFTFGS----SALADNKEDVKK 509
Query: 501 AFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSFSLGGLK 552
FSFG+ ++ ++ P+FSFG A A+ T + APS G K
Sbjct: 510 PFSFGT---------SQPNNTPSFSFGKTTANLPANSST-SPAPSIPSTGFK 551
Score = 64.3 bits (155), Expect = 7e-10
Identities = 69/264 (26%), Positives = 112/264 (42%), Gaps = 20/264 (7%)
Query: 189 QQAKDTQP-KSGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXX 247
+ A D+Q K F FG + + K +F FG + S + SKP ++
Sbjct: 290 KHAADSQNNKPSFVFGQAAAKPSLEKSSFTFGSTTIEKKNDENSTSNSKPEKSSDSNDSN 349
Query: 248 XXXXXAKPTETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGS-- 305
+ P++ + P+ + S G +K + F+FG+A A + S +
Sbjct: 350 PSFSFSIPSKNT-PDASKPSFSFGVPNSSKNETSKPVFSFGAATPSAKEASQEDDNNNVE 408
Query: 306 KPEEKTSGAKTGFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSK 365
KP K + + K ++ D+KPAFSFG +G+E KP P
Sbjct: 409 KPSSKPAFNLISNAGTEKEKESKKDSKPAFSFGIS-NGSESKD------SDKPSLPSAVD 461
Query: 366 PSNDKPE-SKQGFAFNVKSGNSK-EETKS-GFSLGSKT-EESKPASKMGFSLGSLNTNAD 421
NDK E +K F+F + + +K +TK+ F+ GS ++K K FS G+ N
Sbjct: 462 GENDKKEATKPAFSFGINTNTTKTADTKAPTFTFGSSALADNKEDVKKPFSFGTSQPN-- 519
Query: 422 DTESKPGFSFGNKTEDTKSASKAA 445
+ P FSFG T + + S +
Sbjct: 520 ---NTPSFSFGKTTANLPANSSTS 540
Score = 56.2 bits (134), Expect = 2e-07
Identities = 68/262 (25%), Positives = 98/262 (36%), Gaps = 39/262 (14%)
Query: 319 SFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPV--APEPSKPSND----KPE 372
S S +ED+ P F+ AKP ++ FSFG K + S ND PE
Sbjct: 160 SSDSSSEDEVKVEGPKFTIDAKPPISDSV----FSFGPKKENRKKDESDSENDIEIKGPE 215
Query: 373 SK-----QGFAFNVKSGNSKEETK--------SGFSLGSKTEESKPASKMGFSLGSLNTN 419
K F + K E K S S S TE++K + + + +
Sbjct: 216 FKFSGTVSSDVFKLNPSTDKNEKKTETNAKPFSFSSATSTTEQTKSKNPLSLTEATKTNV 275
Query: 420 ADDTESKPGFSFGNKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPA 479
++++++ F+FG K +K +F F + S K SF GS T E K D +
Sbjct: 276 DNNSKAEASFTFGTKHAADSQNNKPSFVF-GQAAAKPSLEKSSFTFGSTTIEKKNDEN-- 332
Query: 480 FSLGAXXXXXXXXXXXXXXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDT 539
S +FS SK +T SKP+FSFG S
Sbjct: 333 -STSNSKPEKSSDSNDSNPSFSFSIPSK-------NTPDASKPSFSFG-----VPNSSKN 379
Query: 540 KTEAPSFSLGGLKPDTTKETTE 561
+T P FS G P + + E
Sbjct: 380 ETSKPVFSFGAATPSAKEASQE 401
>YOR098c [YU] KOG4719 Nuclear pore complex protein
Length = 1076
Score = 83.6 bits (205), Expect = 1e-15
Identities = 102/383 (26%), Positives = 147/383 (37%), Gaps = 65/383 (16%)
Query: 200 FSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPS---VNASKPIFGANXXXXXXXXXXAKPT 256
F+FG + + T A F FG + + T S ++ PIF +
Sbjct: 406 FNFGGKSDTVTSASQPFKFGKTSEKSENHTESDAPPKSTAPIFSFGKQEENGD----EGD 461
Query: 257 ETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAKT 316
+ ++P L T+TKP F+FG GD + S EK + K
Sbjct: 462 DENEPK-RKRRLPVSEDTNTKPL-----FDFGK-TGDQKETKKGES------EKDASGKP 508
Query: 317 GFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPA-FSFGSKPVAPEPSKPSNDKPES-- 373
F FG+ DK + P F+FG K T A F+FG A E ++ P +
Sbjct: 509 SFVFGA--SDKQAEGTPLFTFGKKADVTSNIDSSAQFTFGKAATAKETHTKPSETPATIV 566
Query: 374 -KQGFAFNVKSGNSK---EETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGF 429
K F F + +K K FS SK+EE + +S + + +KP F
Sbjct: 567 KKPTFTFGQSTSENKISEGSAKPTFSF-SKSEEERKSSPI-----------SNEAAKPSF 614
Query: 430 SFGNKTEDTKSAS-----KAAFSFDNKTDGSKS----ESKPSFALGSNTSENKADPSPAF 480
SF K D ++ + K FSF S KPSF S+ + + P P F
Sbjct: 615 SFPGKPVDVQAPTDDKTLKPTFSFTEPAQKDSSVVSEPKKPSFTFASSKT---SQPKPLF 671
Query: 481 SLGAXXXXXXXXXXXXXXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTK 540
S G +FSF PA+ K + P+F+FG T + TK
Sbjct: 672 SFG----KSDAAKEPPGSNTSFSFTKPPAN---ETDKRPTPPSFTFGGSTTNNTTTTSTK 724
Query: 541 TEAPSFSLGGLKPDTTKETTESA 563
PSFS G P++ K T +A
Sbjct: 725 ---PSFSFGA--PESMKSTASTA 742
Score = 81.3 bits (199), Expect = 5e-15
Identities = 118/433 (27%), Positives = 160/433 (36%), Gaps = 98/433 (22%)
Query: 193 DTQPKSG---FSFGTQPE--------------------QKTDAKPAFNFGLSGNNAMTTT 229
D PKS FSFG Q E + T+ KP F+FG +G+ T
Sbjct: 438 DAPPKSTAPIFSFGKQEENGDEGDDENEPKRKRRLPVSEDTNTKPLFDFGKTGDQKETKK 497
Query: 230 PSVN---ASKP--IFGANXXXXXXX---XXXAKPTETSKPNTNATSLFG----GNHTDTK 277
+ KP +FGA+ K TS +++A FG T TK
Sbjct: 498 GESEKDASGKPSFVFGASDKQAEGTPLFTFGKKADVTSNIDSSAQFTFGKAATAKETHTK 557
Query: 278 PAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSG-AKTGFSFGSKTEDKPTD------ 330
P+ + A KP+F+ + + + G AK FSF E++ +
Sbjct: 558 PSE--------TPATIVKKPTFTFGQSTSENKISEGSAKPTFSFSKSEEERKSSPISNEA 609
Query: 331 AKPAFSFGAKPSGTE-----QAGKPAFSFGS-----KPVAPEPSKPSNDKPESKQG---- 376
AKP+FSF KP + + KP FSF V EP KPS SK
Sbjct: 610 AKPSFSFPGKPVDVQAPTDDKTLKPTFSFTEPAQKDSSVVSEPKKPSFTFASSKTSQPKP 669
Query: 377 -FAFNVKSGNSKE----ETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTES-KPGFS 430
F+F KS +KE T F+ E K + F+ G TN T S KP FS
Sbjct: 670 LFSFG-KSDAAKEPPGSNTSFSFTKPPANETDKRPTPPSFTFGGSTTNNTTTTSTKPSFS 728
Query: 431 FGNKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXXXX 490
FG +AS AA + + ++G SF ++ E P+ F A
Sbjct: 729 FGAPESMKSTASTAAANTEKLSNGF------SFTKFNHNKEKSNSPTSFFDGSA------ 776
Query: 491 XXXXXXXXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSFSLGG 550
KP D+ + T SK AFSFG T + T A S S
Sbjct: 777 -------SSTPIPVLGKPTDATGNTT---SKSAFSFG-----TANTNGTNASANSTSFSF 821
Query: 551 LKPDTTKETTESA 563
P T TT ++
Sbjct: 822 NAPATGNGTTTTS 834
Score = 76.6 bits (187), Expect = 1e-13
Identities = 89/330 (26%), Positives = 129/330 (38%), Gaps = 74/330 (22%)
Query: 256 TETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPE-----EK 310
T + K + ATS G + G T + A P+ S + K +
Sbjct: 344 TPSKKTSPKATSSAGAVFKSSVEMGKTD-----KSTKTAEAPTLSFNFSQKANKTKAVDN 398
Query: 311 TSGAKTGFSFGSKTEDKPTDAKPAFSFGAKPSGTE---------QAGKPAFSFGSKPV-- 359
T + T F+FG K+ D T A F FG +E ++ P FSFG +
Sbjct: 399 TVPSTTLFNFGGKS-DTVTSASQPFKFGKTSEKSENHTESDAPPKSTAPIFSFGKQEENG 457
Query: 360 -----APEPSK----PSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMG 410
EP + P ++ +K F F K+G+ KE TK G S E + K
Sbjct: 458 DEGDDENEPKRKRRLPVSEDTNTKPLFDFG-KTGDQKE-TKKGES------EKDASGKPS 509
Query: 411 FSLGSLNTNADDTESKPGFSFGNKTEDTKSA-SKAAFSFDNKTDGSKSESKPS------- 462
F G+ + A+ T P F+FG K + T + S A F+F ++ +KPS
Sbjct: 510 FVFGASDKQAEGT---PLFTFGKKADVTSNIDSSAQFTFGKAATAKETHTKPSETPATIV 566
Query: 463 ----FALGSNTSENKADPSPAFSLGAXXXXXXXXXXXXXXXXAFSFGSKPADSRTSDTKV 518
F G +TSENK A FSF + ++S
Sbjct: 567 KKPTFTFGQSTSENKISEGSA-------------------KPTFSFSKSEEERKSSPISN 607
Query: 519 DS-KPAFSFGSKPAETTASKDTKTEAPSFS 547
++ KP+FSF KP + A D KT P+FS
Sbjct: 608 EAAKPSFSFPGKPVDVQAPTDDKTLKPTFS 637
>7302936 [Y] KOG2196 Nuclear porin
Length = 394
Score = 81.6 bits (200), Expect = 4e-15
Identities = 95/405 (23%), Positives = 151/405 (36%), Gaps = 44/405 (10%)
Query: 377 FAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFGNKTE 436
F+F + +G SG + + PA+K FS G T + G +
Sbjct: 20 FSFGLSTGTPAAAPASGAAT------TAPATKTTFSFG--------TPAPTAGIGGGDAD 65
Query: 437 DTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXXXXXXXXXX 496
++K+ + AF F GS + S P LG+ + N A + A + G
Sbjct: 66 NSKAQAPPAFGFGL---GSGTASAP-LTLGTQAAANPASTTSATATGTSAAPPAFGGFTA 121
Query: 497 XXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSF--SLGGLKPD 554
+ + T+ T G+ P T A+ T T APS S G P
Sbjct: 122 QPAASVVPTIATSAPNTAATTTGLLGGSGLGA-PKTTAAASTTLTAAPSAIASTQGAAPA 180
Query: 555 TTKETTESAXXXXXXXXXXXXXXXXIEPVSLDNKTLDDLVSKWTSQLSGTADHFESYAKK 614
T +T A L L++ ++KWT + F A +
Sbjct: 181 PTL-STGGAFANLTTETKTTDSSAVSTASQLSYHQLEEHINKWTLEFEEQEKVFTEQATQ 239
Query: 615 INQWDKVLMQGGEQISRLYSDTLTAEQSQNRVDQSLSYIERQQSELEYFLDSYEQKAEDL 674
IN WDK+L+ +I L + Q +DQ L +I QQ ELE L E++ +L
Sbjct: 240 INAWDKLLISNNGKIVELNDAVKKVKTDQQVLDQELEFIATQQKELEDSLGPLEKEFVNL 299
Query: 675 LSEVLXXXXXXXXXXXXDQKRQQAYHTVEMXXXXXXXXXXXXXXXITEINEVSETFNKAT 734
D +R Q Y VE I +NE NK
Sbjct: 300 --------------PRVDMERSQTYLMVENLDTQLKQMSEDLKEIIDNLNEA----NKGQ 341
Query: 735 NSSFPNKEENAQLIQLLNSHLDALKSLENNSQQLEGKLKTLTKSQ 779
+++ P Q+ ++LN+H+++L+ +E+ S + KL+ + K Q
Sbjct: 342 DTTDP----IIQIGKILNAHMNSLQWIESQSTNISKKLEDIGKIQ 382
>SPAC30D11.04c [YU] KOG4719 Nuclear pore complex protein
Length = 1159
Score = 79.0 bits (193), Expect = 3e-14
Identities = 122/440 (27%), Positives = 165/440 (36%), Gaps = 106/440 (24%)
Query: 190 QAKDTQPK-----SGFSFG-----TQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPI- 238
+ KD P SGFSFG T E++ P FNF L NNA +T + +
Sbjct: 556 EKKDNAPSAPASTSGFSFGGFAPKTLEEKEETKAPTFNFSL--NNASSTQDTTKPTLQFN 613
Query: 239 FGANXXXXXXXXXXAKPTETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPS 298
FG++ K T N A+S + P S FG+ AG ++ S
Sbjct: 614 FGSSFGKPTSNIFNDKKTSE---NGLASSTVASESKPSAPESKPSS-GFGNTAG-SSPFS 668
Query: 299 FSLSLGSKPEEKTSGAKTGFSFGSKTEDKPTDAKPA-----FSFGAKPSGTEQAGKPAFS 353
F+L+ SK T+ FSF K +D+ D+ A FSF AKP+ TE A
Sbjct: 669 FNLTKESKEVPPTNS----FSFAKKGKDEANDSLSAKASTPFSF-AKPN-TENVTTTAPQ 722
Query: 354 FGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESK--------- 404
F P +N PE FN ++ KE K G K E K
Sbjct: 723 FSFNFTKPNTDAKTNLLPEK----TFNEEAVKQKETEKEVPPTGPKASEIKDSVSSNNAV 778
Query: 405 PASKMGFSL----------------GSLNTNADDT--------ESKP-GFSFGNKTEDT- 438
P+S F + TN + T ++KP FSFG+ TE
Sbjct: 779 PSSTFNFVSPFAAVSEKTNENNIPNDTTKTNGNATKRTLEQTEDAKPFAFSFGSTTEQAN 838
Query: 439 KSAS------KAAFSFDNKTDGSKSESKPSFAL-------------GSNTSENKADPSPA 479
K AS K +KTDG + + SFA G +++ N PSPA
Sbjct: 839 KKASTSNETTKPQLDTSSKTDGVTANAPFSFASAFNAPKPSTNTADGKDSASNLTTPSPA 898
Query: 480 FSLGAXXXXXXXXX---XXXXXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTAS 536
FS G FSFG+ +KPAFSFGS ++TT
Sbjct: 899 FSFGNNSGVKASSNNNPSTNSSTAPFSFGTS------------NKPAFSFGSATSKTT-- 944
Query: 537 KDTKTEAPSFSLGGLKPDTT 556
++ AP+ S P T+
Sbjct: 945 --SEGTAPAASASAPAPTTS 962
Score = 69.3 bits (168), Expect = 2e-11
Identities = 90/334 (26%), Positives = 114/334 (33%), Gaps = 67/334 (20%)
Query: 193 DTQPKSGFSFGTQPEQKTDAKP-AFNFGLSGNNAM--------TTTPSVNASKPIFGANX 243
DT +G + EQ DAKP AF+FG + A TT P ++ S G
Sbjct: 804 DTTKTNGNATKRTLEQTEDAKPFAFSFGSTTEQANKKASTSNETTKPQLDTSSKTDGVTA 863
Query: 244 XXXXXXXXXAKPTETSKPNTNATSLFGGNHTDTKPAGATS-GFNFGSAAGDANKPSFSLS 302
A KP+TN T P+ A S G N G A N PS + S
Sbjct: 864 NAPFSF---ASAFNAPKPSTNTADGKDSASNLTTPSPAFSFGNNSGVKASSNNNPSTNSS 920
Query: 303 LGSKPEEKTSGAKTGFSFGSKTE-------------DKPTDAKPAFSFGAKPSG------ 343
+ P + K FSFGS T P AFSFGA S
Sbjct: 921 --TAPFSFGTSNKPAFSFGSATSKTTSEGTAPAASASAPAPTTSAFSFGASNSSMNKEEN 978
Query: 344 ---TEQAG--------KPAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKS 392
+ AG K FSFG+ S P FAF +SG
Sbjct: 979 TPMAKDAGDTAPASGFKSGFSFGANNSPQPASMFGTSTPAPSSAFAFGNQSG-------- 1030
Query: 393 GFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFGNKTEDTKSASKAAFSFDNKT 452
+ PA+ GF G + A + GF+F + +A
Sbjct: 1031 ----------TNPAAPAGF--GGITNTATNNPPSTGFTFTPSNAGSTAAPMFGAGNTPNP 1078
Query: 453 DGSKSESKPSFALGSNTSENKAD--PSPAFSLGA 484
GS + + +FA GS N A PS FS GA
Sbjct: 1079 SGSINNASQAFAFGSGEPSNPASNPPSTGFSFGA 1112
Score = 57.4 bits (137), Expect = 8e-08
Identities = 70/254 (27%), Positives = 94/254 (36%), Gaps = 53/254 (20%)
Query: 327 KPTDAKPAFSFGAKPSGTEQA-----GKPAFSFGSKPVAPEPSKPSN--DKPESKQGFAF 379
K + KP F F PS T++ KP+F P E K N P S GF+F
Sbjct: 515 KENEPKPTF-FAQLPSKTQETPSITENKPSFFSQLSPKREETEKKDNAPSAPASTSGFSF 573
Query: 380 N---VKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFG---- 432
K+ KEETK A FSL + ++ D T+ F+FG
Sbjct: 574 GGFAPKTLEEKEETK--------------APTFNFSLNNASSTQDTTKPTLQFNFGSSFG 619
Query: 433 ----NKTEDTKSASK--AAFSFDNKTDGSKSESKPSFALGSNTSENKADPSP-AFSLGAX 485
N D K++ A+ + +++ S ESKPS G N A SP +F+L
Sbjct: 620 KPTSNIFNDKKTSENGLASSTVASESKPSAPESKPSSGFG-----NTAGSSPFSFNL--- 671
Query: 486 XXXXXXXXXXXXXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPS 545
+FSF K D + FSF E T AP
Sbjct: 672 ----TKESKEVPPTNSFSFAKKGKDEANDSLSAKASTPFSFAKPNTENVT-----TTAPQ 722
Query: 546 FSLGGLKPDTTKET 559
FS KP+T +T
Sbjct: 723 FSFNFTKPNTDAKT 736
Score = 53.9 bits (128), Expect = 9e-07
Identities = 74/319 (23%), Positives = 99/319 (30%), Gaps = 61/319 (19%)
Query: 83 SAFGATTTNDNGQTKPAFGGFGMNTQQGANA-----VKPAASPFSFGASNTTAGTGDAPK 137
+A G + ++ PAF FG N+ A++ + +PFSFG SN K
Sbjct: 882 TADGKDSASNLTTPSPAFS-FGNNSGVKASSNNNPSTNSSTAPFSFGTSN---------K 931
Query: 138 PAFGGFXXXXXXXXXXXXXXXXXXXXXXKPTXXXXXXXXXXXXXXXXXXXXQQAKDTQPK 197
PAF + + A DT P
Sbjct: 932 PAFSFGSATSKTTSEGTAPAASASAPAPTTSAFSFGASNSSMNKEENTPMAKDAGDTAPA 991
Query: 198 SGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKPTE 257
SGF G +PA FG T+TP+ +S FG
Sbjct: 992 SGFKSGFSFGANNSPQPASMFG-------TSTPA-PSSAFAFG----------------N 1027
Query: 258 TSKPNTNATSLFGGNHTDTKPAGATSGFNF-GSAAGDANKPSFSLSLGSKPEEKTSGAKT 316
S N A + FGG ++GF F S AG P F P + A
Sbjct: 1028 QSGTNPAAPAGFGGITNTATNNPPSTGFTFTPSNAGSTAAPMFGAGNTPNPSGSINNASQ 1087
Query: 317 GFSFGSKTEDKPTDAKPA--FSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSNDKPESK 374
F+FGS P P+ FSFGA P S + +
Sbjct: 1088 AFAFGSGEPSNPASNPPSTGFSFGA-------------------ATPSAFNASASQSPAP 1128
Query: 375 QGFAFNVKSGNSKEETKSG 393
G FN+ S NS+ G
Sbjct: 1129 NGIQFNLGSSNSQTNAPPG 1147
>Hs4826872 [YU] KOG4719 Nuclear pore complex protein
Length = 1475
Score = 71.6 bits (174), Expect = 4e-12
Identities = 105/422 (24%), Positives = 158/422 (36%), Gaps = 86/422 (20%)
Query: 191 AKDTQPKSGFSFGTQ-----PEQKTDAKPAFNFGLSGN---NAMTTTPSVNA-------S 235
+ ++ S F FG P Q + F FG G + + S+N S
Sbjct: 894 SSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKIGVSSDSGSINPMSEGFKFS 953
Query: 236 KPI----FGANXXXXXXXXXXAKPTETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAA 291
KPI FG + +KP E K + N FG + + P T F FG +
Sbjct: 954 KPIGDFKFGVSSE--------SKPEEVKKDSKNDNFKFGLSSGLSNPVSLTP-FQFGVS- 1003
Query: 292 GDANKPSFSLSLGSKPEEKTSGAKTGFSFGSKTEDKPTDAKPAFSFGAKPSGT--EQAGK 349
+L K EE + GFSFG+ ++ PA P+ T K
Sbjct: 1004 --------NLGQEEKKEELPKSSSAGFSFGTGV----INSTPA------PANTIVTSENK 1045
Query: 350 PAFSFG-----SKPVAPEPSKPSNDK----PESKQGFAF-NVKS-----------GNSKE 388
+F+ G S VAP K S K P +K GF+F NV+ G ++E
Sbjct: 1046 SSFNLGTIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEE 1105
Query: 389 E-----TKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFG---NKTEDTKS 440
+ T + G K + +P + FS G+ D+ SK FSF ++++
Sbjct: 1106 KQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDENSSKSTFSFSMTKPSEKESEQ 1165
Query: 441 ASKAAFSF--DNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXXXXXXXXXXXX 498
+KA F+F T + +KP F+ +N+S + + P+ + G
Sbjct: 1166 PAKATFAFGAQTSTTADQGAAKPVFSFLNNSSSSSSTPATSAG-GGIFGSSTSSSNPPVA 1224
Query: 499 XXAFSFGSKPADS----RTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSFSLGGLKPD 554
F S P S T+++ FS SK A TT+S T F G +
Sbjct: 1225 TFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLA-TTSSTGTAVTPFVFGPGASSNN 1283
Query: 555 TT 556
TT
Sbjct: 1284 TT 1285
Score = 64.7 bits (156), Expect = 5e-10
Identities = 80/349 (22%), Positives = 128/349 (35%), Gaps = 69/349 (19%)
Query: 257 ETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAKT 316
E++KP T + + + + A+S F FG ++ + S G+ G K
Sbjct: 875 ESAKPGTKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNFKFGDQGGFKI 934
Query: 317 G-----------------------FSFGSKTEDKPTDAK-----PAFSFGAKPSGTEQAG 348
G F FG +E KP + K F FG +
Sbjct: 935 GVSSDSGSINPMSEGFKFSKPIGDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVS 994
Query: 349 KPAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNS---------KEETKSGFSLGSK 399
F FG + E K K S GF+F NS E KS F+LG
Sbjct: 995 LTPFQFGVSNLGQEEKKEELPK-SSSAGFSFGTGVINSTPAPANTIVTSENKSSFNLG-- 1051
Query: 400 TEESKPASKMGFSLGSLNTNADD-TESKPGFSFGN---------------KTEDTKS--A 441
T E+K AS F+ + ++ +K GFSFGN +TE+ +
Sbjct: 1052 TIETKSASVAPFTCKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVLGRTEEKQQEPV 1111
Query: 442 SKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXXXXXXXXXXXXXXA 501
+ + F K D + + +P F+ G N+ + K + S +
Sbjct: 1112 TSTSLVFGKKADNEEPKCQPVFSFG-NSEQTKDENSSKSTFSFSMTKPSEKESEQPAKAT 1170
Query: 502 FSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSFSLGG 550
F+FG A + T+ + +KP FSF + + ++++ P+ S GG
Sbjct: 1171 FAFG---AQTSTTADQGAAKPVFSFLNNSSSSSST-------PATSAGG 1209
Score = 61.2 bits (147), Expect = 6e-09
Identities = 88/322 (27%), Positives = 127/322 (39%), Gaps = 52/322 (16%)
Query: 189 QQAKD-TQPKSGFSFG-TQPEQKTDAKPA---FNFGLSGNNAMTTTPSVNASKPIFGANX 243
+Q KD KS FSF T+P +K +PA F FG +TT A+KP+F
Sbjct: 1139 EQTKDENSSKSTFSFSMTKPSEKESEQPAKATFAFGAQ----TSTTADQGAAKPVF---- 1190
Query: 244 XXXXXXXXXAKPTETSKPNTNA-TSLFGGNHTDTKPAGATSGFN----------FGSAAG 292
+ +S P T+A +FG + + + P AT F FG+ A
Sbjct: 1191 -----SFLNNSSSSSSTPATSAGGGIFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAE 1245
Query: 293 DANKPSFSLSLGSK--PEEKTSGAKTGFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKP 350
+ S S SK T A T F FG T F FGA + T +
Sbjct: 1246 SSTSQSLLFSQDSKLATTSSTGTAVTPFVFGPGASSNNTTTS-GFGFGA--TTTSSSAGS 1302
Query: 351 AFSFGSKPVAP--EPSKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKT----EESK 404
+F FG+ P AP P+ +N P F G S+ S+ S T S+
Sbjct: 1303 SFVFGTGPSAPSASPAFGANQTP------TFGQSQGASQPNPPGFGSISSSTALFPTGSQ 1356
Query: 405 PASKMGFSLGSLNTNADDTESKPGFSFGNKTEDTKSASKAAFSFDNKTDG-SKSESKPS- 462
PA ++ S + + +FG+ T S +AF F + T + + + PS
Sbjct: 1357 PAPPTFGTVSSSSQPPVFGQQPSQSAFGSGTTPN---SSSAFQFGSSTTNFNFTNNSPSG 1413
Query: 463 -FALGSNTSENKADPSPAFSLG 483
F G+N+S A P+ S G
Sbjct: 1414 VFTFGANSSTPAASAQPSGSGG 1435
Score = 56.6 bits (135), Expect = 1e-07
Identities = 78/361 (21%), Positives = 121/361 (32%), Gaps = 69/361 (19%)
Query: 84 AFGATTTNDNGQTKPAFGGFGMNTQQGANAVKPAASPFSFGASNTTAGTGDAPKPAFGGF 143
+F T ++ +PA F Q A + AA P F N ++ + P + GG
Sbjct: 1152 SFSMTKPSEKESEQPAKATFAFGAQTSTTADQGAAKPV-FSFLNNSSSSSSTPATSAGGG 1210
Query: 144 XXXXXXXXXXXXXXXXXXXXXXKPTXXXXXXXXXXXXXXXXXXXXQQAK-DTQPKSG--- 199
P Q +K T +G
Sbjct: 1211 IFGSSTSSSNPPVATFVFGQSSNPVSSSAFGNTAESSTSQSLLFSQDSKLATTSSTGTAV 1270
Query: 200 --FSFGTQPEQKTDAKPAFNFGLSGNNAMT-------TTPSVNASKPIFGANXXXXXXXX 250
F FG F FG + ++ T PS ++ P FGAN
Sbjct: 1271 TPFVFGPGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAFGANQTPTFGQS 1330
Query: 251 XXAKPTETSKPN-------TNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSL 303
A S+PN +++T+LF T ++PA T FG+ + + P F
Sbjct: 1331 QGA-----SQPNPPGFGSISSSTALF---PTGSQPAPPT----FGTVSSSSQPPVF---- 1374
Query: 304 GSKPEEKTSGAKT------GFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSK 357
G +P + G+ T F FGS T + F+F T + F+FG+
Sbjct: 1375 GQQPSQSAFGSGTTPNSSSAFQFGSSTTN--------FNF------TNNSPSGVFTFGAN 1420
Query: 358 PVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLN 417
P S +P GF FN ++ + F++GS + +S FS +
Sbjct: 1421 SSTPAASA----QPSGSGGFPFN--------QSPAAFTVGSNGKNVFSSSGTSFSGRKIK 1468
Query: 418 T 418
T
Sbjct: 1469 T 1469
>CE10988_1 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 608
Score = 71.6 bits (174), Expect = 4e-12
Identities = 105/431 (24%), Positives = 150/431 (34%), Gaps = 56/431 (12%)
Query: 85 FGATTTNDNGQTKPAFGGFGMNTQQGANAV-----KPAASPFSFGASNTT---------- 129
FG++T+ T P G FG +T ++ + PAA FG+++T+
Sbjct: 143 FGSSTST--ATTAPTGGLFGSSTAAPSSGLFGSTAAPAAPGGLFGSTSTSTAAPSGGLFG 200
Query: 130 ---AGTGDAPKPAFGGFXXXXXXXXXXXXXXXXXXXXXXKPTXXXXXXXXXXXXXXXXXX 186
A T AP P+ G F PT
Sbjct: 201 SSAAPTSTAPAPSGGLFGAAPATSNAA-------------PTSGLFGNSAPAATASSGGL 247
Query: 187 XXQQAKDTQPKSGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPS-VNASKPIFGANXXX 245
K P G FG+ T A GL G A T+ PS A+ +FGA+
Sbjct: 248 FGAAPKPAAPSGGL-FGSTAPATTAATTTATSGLFG--APTSAPSSAPATGGLFGASTAP 304
Query: 246 XXXXXXXAKPTETSKPNTNATSLFGGNHTDTK--------PAGATSGFNFGSAAGDANKP 297
S +T + LFG + T PA A++G FG+ A P
Sbjct: 305 AAATGGLFSIGAASA-STPSVGLFGNSSASTTAAAAPATAPAAASTGGLFGATTAAAAAP 363
Query: 298 SFSLS---LGSKPEEKTSGAKTGFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSF 354
+ S + GS + TG FGS T K A A FGA + T A F
Sbjct: 364 TSSTTGGLFGSTAAAPAASLPTGGLFGSSTPAKTPAAPTAGLFGASSTTTTSAPATGSLF 423
Query: 355 GSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEET--KSGFSLGSKTEESKPASKMGFS 412
G+ AP + ++ P + G F S + T G + T A+ G
Sbjct: 424 GT---APATTTATSAAPAASTGGLFGASSTTTPASTAPTGGLFGAATTTAPAAAAPTGGL 480
Query: 413 LGSLNTNADDTESKPGFSFGNKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSEN 472
G+ T A T G FG T T + + AA + S + S P+ ++T
Sbjct: 481 FGAATTTAPATVGPTGGLFGAAT--TTTPATAATLGQTPSTVSATPSLPTTTSTTSTLPK 538
Query: 473 KADPSPAFSLG 483
A+ +P LG
Sbjct: 539 PAEATPTLGLG 549
>SPAC1486.05 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 1778
Score = 71.2 bits (173), Expect = 6e-12
Identities = 133/563 (23%), Positives = 179/563 (31%), Gaps = 94/563 (16%)
Query: 51 LFGNTGGQTXXXXXXXXXXXXXXXXTQQGNAFSAFGATTTNDNGQTKPAFGG-FGMNTQQ 109
LFGN T Q AFG T N T P+ GG FG NT
Sbjct: 67 LFGNRNNTTTTGGTGFGMSSGTGMFGQSNTP--AFGGT----NNATNPSGGGLFGSNT-- 118
Query: 110 GANAVKPAASPFSFGASNTTAGTGDAPKPA--FGGFXXXXXXXXXXXXXXXXXXXXXXKP 167
AN + FSFG++ + G G FG
Sbjct: 119 -ANNNANTGTSFSFGSNAGSTGFGSQGTGGGLFGSSTTPATTNAFGTSGFVSSNANAVNG 177
Query: 168 TXXXXXXXXXXXXXXXXXXXXQQAKDTQPKSGFSFGTQPEQKTDAKPAFNFGLSGNNAMT 227
T Q+ P S+ + + D FG N + T
Sbjct: 178 TANPPYAVTSEKDPQTNGTSVFQSITCMPAYR-SYSFEELRLQDYNQGRRFG---NASST 233
Query: 228 TTPSVNASKPIFGANXXXXXXXXXXAKPTETSKPNTNATS------LFGGNH---TDTKP 278
T S S P FGA+ T +NAT+ LFGG ++T
Sbjct: 234 NTTSAFGSTPAFGASTTPFGQNLSGTTNNATPFGTSNATNTTPGSGLFGGGSAFGSNTTN 293
Query: 279 AGATSGFN---------------------FGSAAGDANKPSFSLSLGSKPEEKTSGAKTG 317
G SG N FG + + KP+FS GS +G TG
Sbjct: 294 TGFGSGTNNASGGLFGQNNNTTSTPSTGLFGGSTFNQQKPAFS-GFGSTTNTTNTGTGTG 352
Query: 318 FSFGSKTEDKPTDAKPAFSFGAKPSGTEQA-GKPAFSFGSKPVAPEPSKPSNDKPESKQ- 375
+ + T FG +GT G FGS +N++P S
Sbjct: 353 LFGSNNATNTGTGQTTGGLFGGAATGTGTGFGSSTGGFGSN---------TNNQPNSGTM 403
Query: 376 -----GFAFNVKSGNSKE--------ETKSGFSLGSKTEESKPASKMGFSLGSLNTNADD 422
GF N + N+ S FS G+ + S GF GS T
Sbjct: 404 GTGLFGFGANNNTANNNTAPTSTFGGNNSSNFSFGANNNAATKPS--GFGFGSTTT---- 457
Query: 423 TESKPGFSFGNKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSL 482
T + GFSFG ++ +A K AF T + + LG+ + N A + A
Sbjct: 458 TPASGGFSFG---QNANNAPKPAFGSTATTAPKPAGTGLFGGLGAGANTNTA--TNATGT 512
Query: 483 GAXXXXXXXXXXXXXXXXAFS-------FGSKPADSRTSDTKVDSKPAFSFGSKPAETTA 535
G A S FGS ++ TS+T FGS A TT
Sbjct: 513 GGSLFGNANTAGSNMFGSANSSTPGTGLFGSTQTNNATSNTGTGL-----FGSNNANTTN 567
Query: 536 SKDTKTEAPSFSLGGLKPDTTKE 558
+ + PS + GGL +TT +
Sbjct: 568 TGGSLFNKPSTTTGGLFGNTTAQ 590
Score = 63.5 bits (153), Expect = 1e-09
Identities = 88/364 (24%), Positives = 108/364 (29%), Gaps = 85/364 (23%)
Query: 52 FGNTGGQTXXXXXXXXXXXXXXXXTQQGNAFSA-FGATTTNDNGQTKPAFGGFGMNTQQG 110
FG+T T T G FG T + GGFG NT
Sbjct: 338 FGSTTNTTNTGTGTGLFGSNNATNTGTGQTTGGLFGGAATGTGTGFGSSTGGFGSNTNNQ 397
Query: 111 ANAVKPAASPFSFGASNTTAGTGDAPKPAFGGFXXXXXXXXXXXXXXXXXXXXXXKPTXX 170
N+ F FGA+N TA AP FGG KP
Sbjct: 398 PNSGTMGTGLFGFGANNNTANNNTAPTSTFGG-------NNSSNFSFGANNNAATKP--- 447
Query: 171 XXXXXXXXXXXXXXXXXXQQAKDTQPKSGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTP 230
SGF FG+ T A F+FG + N
Sbjct: 448 ---------------------------SGFGFGS--TTTTPASGGFSFGQNAN------- 471
Query: 231 SVNASKPIFGANXXXXXXXXXXAKPTETSKPNTNATSLFGGNHTDTKPAGATSGFNF-GS 289
NA KP FG+ T T+ P T LFGG AT+ GS
Sbjct: 472 --NAPKPAFGS--------------TATTAPKPAGTGLFGGLGAGANTNTATNATGTGGS 515
Query: 290 AAGDANKPSFSLSLGSKPEEKTSGAKTGFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGK 349
G+AN ++ GS +S TG FGS + T FG+ + T G
Sbjct: 516 LFGNANTAGSNM-FGS---ANSSTPGTGL-FGSTQTNNATSNTGTGLFGSNNANTTNTGG 570
Query: 350 PAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKM 409
F +KP + G F + T SG S T S
Sbjct: 571 SLF----------------NKPSTTTGGLFGNTTAQQPSTTTSGLFGASNTNNQAQTSNF 614
Query: 410 GFSL 413
G L
Sbjct: 615 GTGL 618
Score = 62.8 bits (151), Expect = 2e-09
Identities = 92/383 (24%), Positives = 131/383 (34%), Gaps = 80/383 (20%)
Query: 191 AKDTQPKSGFSFGTQPEQKTDAKPAFNFGLSG--------NNAMTTTPSVNASKPIFGAN 242
A +T P SG G F G + NN T+TPS +FG +
Sbjct: 271 ATNTTPGSGLFGGGSAFGSNTTNTGFGSGTNNASGGLFGQNNNTTSTPSTG----LFGGS 326
Query: 243 XXXXXXXXXXAKPTETSKPNTNA-TSLFGGNHTDTKPAGATSGFNFGSAAGD------AN 295
+ T+ NT T LFG N+ G T+G FG AA ++
Sbjct: 327 TFNQQKPAFSGFGSTTNTTNTGTGTGLFGSNNATNTGTGQTTGGLFGGAATGTGTGFGSS 386
Query: 296 KPSFSLSLGSKPEEKTSGAKTG-FSFGSKTEDKPTDAKPAFSFGAKPSGTEQAG------ 348
F + ++P T G TG F FG+ + P +FG S G
Sbjct: 387 TGGFGSNTNNQPNSGTMG--TGLFGFGANNNTANNNTAPTSTFGGNNSSNFSFGANNNAA 444
Query: 349 -KPA-FSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPA 406
KP+ F FGS P + GF+F + N+ K F + T KPA
Sbjct: 445 TKPSGFGFGSTTTTP-----------ASGGFSFGQNANNAP---KPAFG-STATTAPKPA 489
Query: 407 SKM---GFSLGSLNTNADDTESKPGFSFGNKTEDTKSASKAAFSFDNKTDGSKSESKPSF 463
G G+ A + G FGN +A F GS + S P
Sbjct: 490 GTGLFGGLGAGANTNTATNATGTGGSLFGN----ANTAGSNMF-------GSANSSTPGT 538
Query: 464 ALGSNTSENKADPSPAFSLGAXXXXXXXXXXXXXXXXAFSFGSKPADSRTSDTKVDSKPA 523
L +T N A + L FGS A++ + + +KP+
Sbjct: 539 GLFGSTQTNNATSNTGTGL---------------------FGSNNANTTNTGGSLFNKPS 577
Query: 524 FSFGSKPAETTASKDTKTEAPSF 546
+ G TTA + + T + F
Sbjct: 578 TTTGGLFGNTTAQQPSTTTSGLF 600
>7299479 [R] KOG1721 FOG: Zn-finger
Length = 1659
Score = 68.6 bits (166), Expect = 4e-11
Identities = 110/430 (25%), Positives = 152/430 (34%), Gaps = 90/430 (20%)
Query: 85 FGATTTN-DNGQTKPAFGGFGMNTQQGANAVKPAASPFSFGASNTTAGTGDAPKPAFGGF 143
F ATTT G T FG A PA+ FG + TT AFGG
Sbjct: 1227 FAATTTAAGGGSTATNLFSFGGTATSKAAEPAPASQKNLFGLNATT-----TTPFAFGG- 1280
Query: 144 XXXXXXXXXXXXXXXXXXXXXXKPTXXXXXXXXXXXXXXXXXXXXQQAKDTQPKSGFSFG 203
KP + P FSFG
Sbjct: 1281 --------AAAGAADKSENKDNKP-------------IAFAFGAGNNSAVANPSGVFSFG 1319
Query: 204 TQPEQKTDAKPAFNFGLSGNNAMTTTPSVNA---------SKPIFGANXXXXXXXXXXAK 254
+ A PAF G + + T TP+ N + P+FG+ A
Sbjct: 1320 GTDK---SAPPAFGSGTTSVTSATATPTNNTFGFSTTQKPATPMFGSGSTQQSSTPAVA- 1375
Query: 255 PTETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAA-----------------GDANKP 297
+KP T L GG T + A+ GF+F + A A+KP
Sbjct: 1376 ---ATKPFT----LGGGAPTTPSASPASGGFSFSAVATKNTTAPTAGTNLFGSPASASKP 1428
Query: 298 SFSLSLGSKPEEKTSGAKT-GFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGS 356
SF+ + + +G+ GFSF + T K D+ FG+ +G KP FSF S
Sbjct: 1429 SFNFGGNTATQAAAAGSPAGGFSFATTT--KKEDSASTNMFGSPNTGVV---KPNFSFSS 1483
Query: 357 KPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSL 416
P P+ P A + S ++K F+ G+ T + P +G +L +
Sbjct: 1484 NNPTPAPTFGGFGAP------AAAAPTATSTNQSKP-FAFGASTPAAAPQPPLGGNLFAN 1536
Query: 417 NTNADDTESKPG--FSFG-NKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENK 473
+A ++KP FSFG K+ +A A FSF + G + S P SN N
Sbjct: 1537 AVSATQNQTKPSGVFSFGAAKSTAGTTAGNAPFSFGGASAGGIA-SPP-----SNQGLNT 1590
Query: 474 ADPSPAFSLG 483
A P FS G
Sbjct: 1591 AKP---FSFG 1597
Score = 66.6 bits (161), Expect = 1e-10
Identities = 106/408 (25%), Positives = 148/408 (35%), Gaps = 81/408 (19%)
Query: 191 AKDTQPKSGFSFG-----------TQPEQKTDAKPA-FNFGLSGNNAMTTTPSVNASKPI 238
A DT K FSFG T AKPA F+FG S TT P+ A P+
Sbjct: 1114 AADTGVKPMFSFGKSNNLSSGTPTTNGSDAAAAKPAVFSFGGS-----TTQPAAAAPTPV 1168
Query: 239 FGA--NXXXXXXXXXXAKPTETSKPN---------------------TNATSL---FGGN 272
FG+ A +ET+KP+ T A L FG
Sbjct: 1169 FGSLSKPLGEGFASPGANKSETTKPSIFGNLDNGLGNAMKSSTNVAATTAAELPKPFGFA 1228
Query: 273 HTDTKPAG---ATSGFNFG----SAAGDANKPSFSLSLGSKPEEKTSGAKTGFSFGSKTE 325
T T G AT+ F+FG S A + S G T A G + G+ +
Sbjct: 1229 ATTTAAGGGSTATNLFSFGGTATSKAAEPAPASQKNLFGLNATTTTPFAFGGAAAGAADK 1288
Query: 326 DKPTDAKP-AFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSG 384
+ D KP AF+FGA + FSFG + P+ F S
Sbjct: 1289 SENKDNKPIAFAFGAGNNSAVANPSGVFSFGGTDKSAPPA------------FGSGTTSV 1336
Query: 385 NSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFGNKTEDTKSASKA 444
S T + + G T + KPA+ M S + ++ + F+ G T SAS A
Sbjct: 1337 TSATATPTNNTFGFSTTQ-KPATPMFGSGSTQQSSTPAVAATKPFTLGGGAPTTPSASPA 1395
Query: 445 AFSFDNKTDGSKSESKPSFALGSNTSENKADPS-PAFSLGAXXXXXXXXXXXXXXXXAFS 503
+ F +K+ + P+ G+N + A S P+F+ G +F+
Sbjct: 1396 SGGFSFSAVATKNTTAPT--AGTNLFGSPASASKPSFNFGGNTATQAAAAGSPAGGFSFA 1453
Query: 504 FGSKPADSRT-----SDTKVDSKPAFSFGSKPAETTASKDTKTEAPSF 546
+K DS + S KP FSF S + T AP+F
Sbjct: 1454 TTTKKEDSASTNMFGSPNTGVVKPNFSF---------SSNNPTPAPTF 1492
Score = 66.6 bits (161), Expect = 1e-10
Identities = 118/429 (27%), Positives = 159/429 (36%), Gaps = 84/429 (19%)
Query: 191 AKDTQPKSGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSV---NASKPIFG-----AN 242
A +QP SFGT K+ A P+F+FG + N +T ++ SKPIF AN
Sbjct: 995 ATSSQPL--ISFGTP---KSTAAPSFSFGSATNTTSSTIANITNTTTSKPIFSFGQTPAN 1049
Query: 243 --XXXXXXXXXXAKPTETSKPNTN------ATSLFG---GNHTDTKPAGATSGFNFG--- 288
P TS TN +T+ FG T T T NFG
Sbjct: 1050 GPTVGGLSGFKTEAPATTSVSTTNPGTQVTSTTTFGVTPPKTTTTVAPTTTVSLNFGQPM 1109
Query: 289 ---SAAGDANKPSFSLSLGSKPEEKTSGAKTGFSFGSKTEDKPTDAKPA-FSFGAKPSGT 344
AA KP FS K +SG T + GS AKPA FSFG +
Sbjct: 1110 PSFGAADTGVKPMFSF---GKSNNLSSGTPT--TNGSDA----AAAKPAVFSFGGSTTQP 1160
Query: 345 EQAG-KPAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEES 403
A P F SKP+ + P +K E+ + F KS ++ + T
Sbjct: 1161 AAAAPTPVFGSLSKPLGEGFASPGANKSETTKPSIFGNLDNGLGNAMKSSTNVAATTAAE 1220
Query: 404 KPASKMGFSLGSLNTNADDTESKPGFSFGNKTEDTKSASKA----------------AFS 447
P GF+ + T + FSFG T +K+A A F+
Sbjct: 1221 LP-KPFGFAATTTAAGGGSTATNL-FSFGG-TATSKAAEPAPASQKNLFGLNATTTTPFA 1277
Query: 448 FDNKTDGS--KSESKP----SFALGSNTSENKADPSPAFSLGAXXXXXXXXXXXXXXXXA 501
F G+ KSE+K +FA G+ + A+PS FS G A
Sbjct: 1278 FGGAAAGAADKSENKDNKPIAFAFGAGNNSAVANPSGVFSFGG---------TDKSAPPA 1328
Query: 502 FSFGSKPADSRTSDTKVDSKPAFSFGSKPAE------TTASKDTKTEAPS--FSLGGLKP 553
F G+ S T+ T ++ FS KPA +T T A + F+LGG P
Sbjct: 1329 FGSGTTSVTSATA-TPTNNTFGFSTTQKPATPMFGSGSTQQSSTPAVAATKPFTLGGGAP 1387
Query: 554 DTTKETTES 562
T + S
Sbjct: 1388 TTPSASPAS 1396
Score = 60.1 bits (144), Expect = 1e-08
Identities = 81/336 (24%), Positives = 109/336 (32%), Gaps = 49/336 (14%)
Query: 83 SAFGATTTNDNGQTKPAFGGFGMNTQQGANAVKPAASPFSFGASNTTAGTGDAPKPAFGG 142
+A GA ++N KP FG +AV + FSFG GT + PAFG
Sbjct: 1281 AAAGAADKSENKDNKPIAFAFGAGNN---SAVANPSGVFSFG------GTDKSAPPAFGS 1331
Query: 143 FXXXXXXXXXXXXXXXXXXXXXXKPTXXXXXXXXXXXXXXXXXXXXQQ-----AKDTQPK 197
KP + T P
Sbjct: 1332 GTTSVTSATATPTNNTFGFSTTQKPATPMFGSGSTQQSSTPAVAATKPFTLGGGAPTTPS 1391
Query: 198 S-----GFSFGTQPEQKTDA---------------KPAFNFGLSGNNAMTTTPSVNASKP 237
+ GFSF + T A KP+FNFG GN T T + A P
Sbjct: 1392 ASPASGGFSFSAVATKNTTAPTAGTNLFGSPASASKPSFNFG--GN---TATQAAAAGSP 1446
Query: 238 IFGANXXXXXXXXXXAKPTETSKPNTNATSL-FGGNHTDTKPAGATSGFNFGSAAG---- 292
G + A PNT F + + PA GF +AA
Sbjct: 1447 AGGFSFATTTKKEDSASTNMFGSPNTGVVKPNFSFSSNNPTPAPTFGGFGAPAAAAPTAT 1506
Query: 293 --DANKP-SFSLSLGSKPEEKTSGAKTGFSFGSKTEDKPTDAKPAFSFGA-KPSGTEQAG 348
+ +KP +F S + + G + S T+++ T FSFGA K + AG
Sbjct: 1507 STNQSKPFAFGASTPAAAPQPPLGGNLFANAVSATQNQ-TKPSGVFSFGAAKSTAGTTAG 1565
Query: 349 KPAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSG 384
FSFG S PSN + + F+F G
Sbjct: 1566 NAPFSFGGASAGGIASPPSNQGLNTAKPFSFGGAGG 1601
>YKR092c [Y] KOG2992 Nucleolar GTPase/ATPase p130
Length = 406
Score = 65.1 bits (157), Expect = 4e-10
Identities = 67/309 (21%), Positives = 134/309 (42%), Gaps = 9/309 (2%)
Query: 257 ETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAKT 316
E S +++++S + + + + ++SG + S++ ++ S S S E +S + +
Sbjct: 23 EKSSSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSS 82
Query: 317 GFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSN--DKPESK 374
S S ++ + + + S G+ S + + + + S+ + ++ S+ D E+K
Sbjct: 83 SSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESEDETKKRARESDNEDAKETK 142
Query: 375 QGFAFNVKSGNSKEETKSGFSLGSKTEE-SKPASKMGFSLGSLNTNADDTESKPGFSFGN 433
+ +S +S E + SG S S++E S+ S S S + + D+ES S +
Sbjct: 143 KAKT-EPESSSSSESSSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSS 201
Query: 434 KTEDTKSASKAAFSFDNK-TDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXXXXXX 492
+ D+ S S ++ S + +D S S S S S++ + S + S G+
Sbjct: 202 SSSDSSSDSDSSSSDSSSDSDSSSSSSSSS----SDSDSDSDSSSDSDSSGSSDSSSSSD 257
Query: 493 XXXXXXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSFSLGGLK 552
+ S S S +++++K A + SK ET AS + T + S S K
Sbjct: 258 SSSDESTSSDSSDSDSDSDSGSSSELETKEATADESKAEETPASSNESTPSASSSSSANK 317
Query: 553 PDTTKETTE 561
+ T E
Sbjct: 318 LNIPAGTDE 326
Score = 50.8 bits (120), Expect = 8e-06
Identities = 45/267 (16%), Positives = 110/267 (40%), Gaps = 8/267 (2%)
Query: 221 SGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKPTETSKPNTNATSLFGGNHTDTKPAG 280
S +++ +++ S S ++ + +E+S +++++S + +D++ +
Sbjct: 38 SSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSS-SSSSSSDSESSS 96
Query: 281 ATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAKTGFSFG------SKTEDKPTDAKPA 334
+ + GS++ ++ S S +E A+ + +KTE + + + +
Sbjct: 97 ESDSSSSGSSSSSSSSSDESSSESESEDETKKRARESDNEDAKETKKAKTEPESSSSSES 156
Query: 335 FSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKSGF 394
S G+ S ++G + S S + S +D Q + + S +S + S
Sbjct: 157 SSSGSSSSSESESGSESDS-DSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSDSDSSSS 215
Query: 395 SLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFGNKTEDTKSASKAAFSFDNKTDG 454
S ++ S +S S + ++ D++S + ++ + S ++ S D+ +D
Sbjct: 216 DSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSSSSSDSSSDESTSSDSSDSDSDS 275
Query: 455 SKSESKPSFALGSNTSENKADPSPAFS 481
S + E+KA+ +PA S
Sbjct: 276 DSGSSSELETKEATADESKAEETPASS 302
>CE05198 [YU] KOG3630 Nuclear pore complex Nup214/CAN component
Length = 1390
Score = 63.5 bits (153), Expect = 1e-09
Identities = 77/276 (27%), Positives = 103/276 (36%), Gaps = 41/276 (14%)
Query: 196 PKSGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKP 255
P F+ T P+ + F GL T TPS + S IFGA
Sbjct: 1053 PSFSFNSTTTPKSTSSTSSIFGGGLK-----TQTPSSSNSTNIFGARTTT---------- 1097
Query: 256 TETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAK 315
T T P +N +S+FGG +K A + G +FG A K S TS A
Sbjct: 1098 TATPTPASNTSSIFGGG---SKAASSPFG-SFGQAGCQPAKTS---------NPATSTAS 1144
Query: 316 TGFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSK---PVAPEPSKPSNDKPE 372
FSF T AKPA FG+ +G + KP+ FG P P D
Sbjct: 1145 VTFSFN--TGATSASAKPA-GFGSFGAGA--SAKPSSVFGGSVTAPTVPNVDDGMEDDSM 1199
Query: 373 SKQGFAFNVKSG--NSKEETKSGFS--LGSKTEESKPASKMGFSLGSLNTNADDTESKPG 428
+ G + SG N++ SG + KT AS + G + KP
Sbjct: 1200 ANGGGSGGFMSGLGNARTSNTSGGNNPFAPKTSTGTSASSSSWLFGGGGNQQQQQQQKPS 1259
Query: 429 FSFGNKTEDTKSASKAAFSFDNKTDGS-KSESKPSF 463
FSF + AS A + G+ K S+P+F
Sbjct: 1260 FSFNTAGSSAQQASAPATGTSSVFGGAPKFGSQPAF 1295
>At1g59660 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 997
Score = 60.5 bits (145), Expect = 1e-08
Identities = 90/351 (25%), Positives = 128/351 (35%), Gaps = 65/351 (18%)
Query: 218 FGLSGNN----AMTTTPSVNASKPIFGANXXXXXXXXXXAKPTETSKP--NTNATSLFGG 271
FG S NN + ++P + +FG KP TS P +S+FGG
Sbjct: 2 FGSSNNNPFGQSSISSPFGTQTHSLFGQTNNNASNNPFATKPFGTSTPFGAQTGSSMFGG 61
Query: 272 NHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAKTGFSFGSKTEDKPTDA 331
T FG+ P S G+ P+ +FGS T+ +
Sbjct: 62 TSTGV----------FGA-------PQTSSPFGASPQ----------AFGSSTQAFGASS 94
Query: 332 KPAFSFGAKP-SGTEQAGKPAFSFGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEET 390
P+F P GT G+ +F + +P S +P AF GNS +
Sbjct: 95 TPSFGSSNSPFGGTSTFGQKSFGLSTPQSSPFGSTTQQSQP------AF----GNSTFGS 144
Query: 391 KSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSF-------GNKTEDTKSASK 443
+ F G+ T + AS + G NT+ + PGF G+ T ++S
Sbjct: 145 STPF--GASTTPAFGASSTP-AFGVSNTSGFGATNTPGFGATNTTGFGGSSTPGFGASST 201
Query: 444 AAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXXXXXXXXXXXXXXAFS 503
AF N T + S P F S+ + A P+PAF AF
Sbjct: 202 PAFGSTN-TPAFGASSTPLFGSSSSPAFG-ASPAPAFG----SSGNAFGNNTFSSGGAFG 255
Query: 504 FGSKP--ADSRTSDTKVDSKPAFSFGSKPA---ETTASKDTKTEAPSFSLG 549
S P S TS S P+F+FGS PA T+A + + SLG
Sbjct: 256 SSSTPTFGASNTSAFGASSSPSFNFGSSPAFGQSTSAFGSSSFGSTQSSLG 306
Score = 51.2 bits (121), Expect = 6e-06
Identities = 73/296 (24%), Positives = 103/296 (34%), Gaps = 55/296 (18%)
Query: 196 PKSGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKP 255
P++ FG P+ + AF ++TPS +S FG + P
Sbjct: 70 PQTSSPFGASPQAFGSSTQAFG--------ASSTPSFGSSNSPFGGTSTFGQKSFGLSTP 121
Query: 256 TETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTS--- 312
+S FG ++PA S F + G + P+F S S P S
Sbjct: 122 Q---------SSPFGSTTQQSQPAFGNSTFGSSTPFGASTTPAFGAS--STPAFGVSNTS 170
Query: 313 --GAKTGFSFG-SKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPS-N 368
GA FG + T + P F + P+ PAF S P+ S P+
Sbjct: 171 GFGATNTPGFGATNTTGFGGSSTPGFGASSTPA-FGSTNTPAFGASSTPLFGSSSSPAFG 229
Query: 369 DKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPG 428
P G + N N+ SG + GS + + G+ NT+A S P
Sbjct: 230 ASPAPAFGSSGNAFGNNT---FSSGGAFGSSSTP---------TFGASNTSAFGASSSPS 277
Query: 429 FSFGNKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGA 484
F+FG S AF GS S +LGS PSP + GA
Sbjct: 278 FNFG---------SSPAFGQSTSAFGSSSFGSTQSSLGST-------PSPFGAQGA 317
>Hs8923135 [Y] KOG2196 Nuclear porin
Length = 184
Score = 58.9 bits (141), Expect = 3e-08
Identities = 27/84 (32%), Positives = 45/84 (53%)
Query: 590 LDDLVSKWTSQLSGTADHFESYAKKINQWDKVLMQGGEQISRLYSDTLTAEQSQNRVDQS 649
L+ L+++W +L +F A ++N WD L++ GE I L+ + + Q R++Q
Sbjct: 77 LEGLINEWNLELEDQEKYFLLQATQVNAWDHTLIENGEMIRILHGEVNKVKLDQKRLEQE 136
Query: 650 LSYIERQQSELEYFLDSYEQKAED 673
L +I QQ ELE+ L E+ D
Sbjct: 137 LDFILSQQQELEFLLTYLEESTRD 160
>7293246 [YU] KOG4719 Nuclear pore complex protein
Length = 1836
Score = 58.2 bits (139), Expect = 5e-08
Identities = 107/462 (23%), Positives = 156/462 (33%), Gaps = 92/462 (19%)
Query: 81 AFSAFGATTTNDNGQTKPAFGGFGMNTQQGANAVKPAASPFSFGASNTTAGTGDAPKPAF 140
A +A TTT PA GGF P++S ++ +T+ A KP F
Sbjct: 1391 ATTASSLTTTISTTSNAPALGGFSFGA--------PSSSSTVSSSTTSTSANPAAVKPMF 1442
Query: 141 -----GGFXXXXXXXXXXXXXXXXXXXXXXKPTXXXXXXXXXXXXXXXXXXXXQQAKDTQ 195
G T A +
Sbjct: 1443 SWSGAGSAVSSTSSSQQPVAKAPTLGFGVSSSTVTTTTTSTKVFAFTPASGLDPAAATSA 1502
Query: 196 PK--SGFSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXA 253
P +GFSFG+Q + T F TP+ + IFGA +
Sbjct: 1503 PAAGAGFSFGSQSKPATTQNTGTFFFGQPTAVAPATPTNPSVSSIFGAPATSTTASTSVS 1562
Query: 254 KPTETSKPNTNATSL-----------FGGNHTDTKPAGATSGF------NFG-SAAGDAN 295
T TS N A+S +G TD GA+SG +FG S+ GDA
Sbjct: 1563 ATTSTSTANAIASSFAPTSTPQLFGNWGEKKTDLTTFGASSGSGTTTTPSFGWSSNGDAA 1622
Query: 296 KPSFSLSLGSKPEEKTS---------GAKTGFSFGSKTEDKPTDAKPAFSFG--AKPSGT 344
K S S ++GS +S G+ + F S + + + + + FG A + T
Sbjct: 1623 K-SNSAAVGSAAVPSSSASTMATPIFGSSSMFGPSSSSNNTTSTSTTSLPFGSAATTAAT 1681
Query: 345 EQAGKPAFSFG------------SKPVAPEPSKPS---------NDKPESKQGFAFNVKS 383
AG A G PVA P+ + N P + F
Sbjct: 1682 TPAGGNAALTGLFGNVGNSLAGVGAPVATTPAATAAAPLTNIFGNPTPVAAAAPVF---- 1737
Query: 384 GNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPG-FSFGNKTEDTKSAS 442
G+ +GF PA+ + +L PG F+FG T T +AS
Sbjct: 1738 GSGSTIPSAGF--------GAPAAAAPLAAPAL----------PGAFNFGGATAATPAAS 1779
Query: 443 KAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGA 484
A F F + T ++ +KPSF + + + A P+PAF+ A
Sbjct: 1780 SAPFVFGSST--NEPLAKPSFNFTGSAASSTA-PAPAFNFTA 1818
>At1g10390 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 1043
Score = 57.8 bits (138), Expect = 6e-08
Identities = 115/488 (23%), Positives = 162/488 (32%), Gaps = 88/488 (18%)
Query: 76 TQQGNAFSAFGATTTNDNGQTKPAFGG--FGMNTQQGANAVKPAASPF--SFGASNTTAG 131
T Q N F N Q++PAFG FG +T GA +P SFGA++T +
Sbjct: 118 TPQSNPFG-------NSTQQSQPAFGNTSFGSSTPFGATNTPAFGAPSTPSFGATSTPS- 169
Query: 132 TGDAPKPAFGGFXXXXXXXXXXXXXXXXXX-XXXXKPTXXXXXXXXXXXXXXXXXXXXQQ 190
G + PAFG PT
Sbjct: 170 FGASSTPAFGATNTPAFGASNSPSFGATNTPAFGASPTPAFGSTGTTFG----------- 218
Query: 191 AKDTQPKSGFSFGTQPEQKTDAKPAFNFGLSGNNAM--TTTPSVNASK-PIFGANXXXXX 247
+T SG +FG A FG SG A ++TP+ AS P FGA+
Sbjct: 219 --NTGFGSGGAFGASNTPAFGASGTPAFGASGTPAFGASSTPAFGASSTPAFGAS----- 271
Query: 248 XXXXXAKPTETSKPNTNATSLFGGNHTDTKPAGATSGFNFGS--AAGDANKPSFSLSLGS 305
+T FGG+ T + A TS F+FGS A G + S + GS
Sbjct: 272 -----------------STPAFGGSSTPSFGASNTSSFSFGSSPAFGQSTSAFGSSAFGS 314
Query: 306 KPEEKTSGAKTGFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSF----------G 355
P FG + T FG G +Q G A + G
Sbjct: 315 TPS----------PFGGQGAQASTPTFGGSGFGQSTFGGQQGGSRAVPYAPTVEADTGTG 364
Query: 356 SKPVAPEPS-------KPSNDKPESKQGFAFNVKSG---NSKEETKSGFSLG-SKTEESK 404
++P S K N + + + K G + +GF + S+
Sbjct: 365 TQPAGKLESISAMPAYKEKNYEELRWEDYQRGDKGGPLPAGQSPGNAGFGISPSQPNPFS 424
Query: 405 PASKMG-FSLGSLNTNADDTESKPGFSFGNKTEDTKSASKAAFSFDNKTDGSKSESKPSF 463
P+ G S N + T + P F+ T + S A +F + G S S F
Sbjct: 425 PSPAFGQTSANPTNPFSSSTSTNP-FAPQTPTIASSSFGTATSNFGSSPFGVTSSSN-LF 482
Query: 464 ALGSNTSENKADPSPAFSLGAXXXXXXXXXXXXXXXXAFSFGSKPADSRTSDTKVDSKPA 523
GS+T+ + S AF + FGS P T +S+P+
Sbjct: 483 GSGSSTTTSVFGSSSAFGTTTPSPLFGSSSTPGFGSSSSIFGSAPGQGAT-PAFGNSQPS 541
Query: 524 FSFGSKPA 531
F S P+
Sbjct: 542 TLFNSTPS 549
Score = 51.2 bits (121), Expect = 6e-06
Identities = 91/363 (25%), Positives = 130/363 (35%), Gaps = 49/363 (13%)
Query: 218 FGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXX-AKPTETSKP----------NTNAT 266
FG S ++ S S+ +FG A P TS P + +T
Sbjct: 2 FGSSNPFGQSSGTSPFGSQSLFGQTSNTSSNNPFAPATPFGTSAPFAAQSGSSIFGSTST 61
Query: 267 SLFGGNHTDTKPAGATSGFNFGSAAGDANK-PSFSLSLGSKPEEKTSG---AKTGFS--- 319
+FG T + P +T F S+ N P+F S S P +SG GFS
Sbjct: 62 GVFGAPQTSS-PFASTPTFGASSSPAFGNSTPAFGASPASSPFGGSSGFGQKPLGFSTPQ 120
Query: 320 ---FGSKTEDKPTDAKPAF---SFGAK-PSGTEQAGKPAFSFGSKPVAPEPSKPSNDKPE 372
FG+ T+ ++PAF SFG+ P G PAF S P S PS
Sbjct: 121 SNPFGNSTQ----QSQPAFGNTSFGSSTPFGA--TNTPAFGAPSTPSFGATSTPSFGASS 174
Query: 373 SKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFG 432
+ A N + + S G+ + AS + GS T +T G +FG
Sbjct: 175 TPAFGATNTPAFGASNSP----SFGATNTPAFGASPTP-AFGSTGTTFGNTGFGSGGAFG 229
Query: 433 NKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXXXXXX 492
AS + T + S P+F S+T A +PAF
Sbjct: 230 ASNTPAFGASGTPAFGASGTPAFGASSTPAFG-ASSTPAFGASSTPAFG------GSSTP 282
Query: 493 XXXXXXXXAFSFGSKPADSRTSDTKVDSKPAFSFGSKPAETTASKDTKTEAPSFSLGGLK 552
+FSFGS PA +++ S +FGS P+ + + P+F G
Sbjct: 283 SFGASNTSSFSFGSSPAFGQSTSAFGSS----AFGSTPS-PFGGQGAQASTPTFGGSGFG 337
Query: 553 PDT 555
T
Sbjct: 338 QST 340
>CE08376 [Y] KOG2992 Nucleolar GTPase/ATPase p130
Length = 971
Score = 53.1 bits (126), Expect = 2e-06
Identities = 79/348 (22%), Positives = 120/348 (33%), Gaps = 37/348 (10%)
Query: 253 AKPTE---TSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEE 309
AKPT T KP L D PA T A + S S KP
Sbjct: 539 AKPTSAKATPKPAAKKADLSSDFSDDEAPAKKTPAKAAPKPASKKAESSSDSSDDEKPAA 598
Query: 310 KTSGAKT----------GFSFGSKTEDKPTDAKPAFSFGA-KPSGTEQAGKPAFSFGSKP 358
K++ AKT S S ++K AKP + KP+ + S P
Sbjct: 599 KSTPAKTTPKPTAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAAKKADSSSDSSDDEAP 658
Query: 359 VAPEPSKPSNDKPESKQGFAFNVKSGNSKEETK---------------SGFSLGSKTEES 403
P KP+ K +K+ + + S + K+ TK + S S +E
Sbjct: 659 AKKTPVKPTPVKIVAKKVDSSSDSSDDEKKPTKATPVKVTPKSVTKKAAASSSDSSDDEK 718
Query: 404 KPASKMGFSL-------GSLNTNADDTESKPGFSFGNKTEDTKSASKAAFSFDNKTDGSK 456
KP K ++ S + ++ D E KP K +SA KA S D+ D +
Sbjct: 719 KPVVKQTPNVVPKKEKAASSSDDSSDDEKKPTAKPTPKATPKQSAKKADSSDDSSDDEAP 778
Query: 457 SESKPSFALGSNTSENKADPSPAFSLGAXXXXXXXXXXXXXXXXAFSFGSKPADSRTSDT 516
++ P+ + + T+ K S + + K S +SD
Sbjct: 779 AKKTPAKSTPAKTAVKKEASSSSDDSSDDEKTKKKSATTPAKSTPKTALKKAESSDSSDD 838
Query: 517 KVD-SKPAFSFGSKPAETTASKDTKTEAPSFSLGGLKPDTTKETTESA 563
D KP+ + +P + + +TE S LK +TE A
Sbjct: 839 DEDLPKPSKAVTPRPQRADSEESAETEESSSRTPALKAKPLATSTEKA 886
>At3g10650 [YU] KOG0845 Nuclear pore complex Nup98 component (sc
Nup145/Nup100/Nup116)
Length = 1309
Score = 53.1 bits (126), Expect = 2e-06
Identities = 70/289 (24%), Positives = 112/289 (38%), Gaps = 31/289 (10%)
Query: 200 FSFGTQPEQKTDAKPAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKPTETS 259
F FG+ P A +FGLSGN+++ + S A + + S
Sbjct: 1027 FQFGSSPS-------APSFGLSGNSSLASNSSPFGFSKSEPAVFTSVSTPQLSSTNSSAS 1079
Query: 260 KPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAKTGFS 319
+T ++ LF G + SG F S+ ++ P+ + S G S T
Sbjct: 1080 SSSTMSSPLF-GTSWQAPNSSPNSGPVFSSSFTTSSTPT-TFSFGGSSAATVSSTTTPI- 1136
Query: 320 FGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSNDKPESKQGFAF 379
FG+ T + P+ + P F FG+ P T Q +P F P S N P GFAF
Sbjct: 1137 FGASTNNTPSPS-PIFGFGSTPPTTPQ--QPVFGNSG---TPSQSLFGNSTP----GFAF 1186
Query: 380 NVKSG----NSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFGNKT 435
+ N+ ++ S+ T+++ AS + G A + +P F+FG
Sbjct: 1187 GAPNNGNGINNNQQVSMEDSMAEDTDQANRASMVAPMFG----QAAVSMPQPNFAFGGGA 1242
Query: 436 EDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGA 484
+ F F + S ++ F S + E + S FSLG+
Sbjct: 1243 ATQPPSMANPFQFGGQPMASTLQNASPFQ-ASQSLEFQGGGS--FSLGS 1288
>YIL115c [YU] KOG3630 Nuclear pore complex Nup214/CAN component
Length = 1460
Score = 52.8 bits (125), Expect = 2e-06
Identities = 86/379 (22%), Positives = 134/379 (34%), Gaps = 44/379 (11%)
Query: 214 PAFNFGLSGNNAMTTTPSVNASKPIFGANXXXXXXXXXXAKPTETSKPNTNATSLFGGNH 273
P + SG + T P+ S ++ A + ++ +T +
Sbjct: 434 PFTSANTSGFTFLKTQPAAANSLQSQSSSTFGAPSFGSSAFKIDLPSVSSTSTGVASSEQ 493
Query: 274 TDTKPAGATSGFN---FGSAAGDAN-------KPSFSLSLGSKPEEKTSGAKTGFSFGSK 323
T PA A F FG+ A + + KPSF + +G +FG
Sbjct: 494 DATDPASAKPVFGKPAFGAIAKEPSTSEYAFGKPSFGAPSFGSGKSSVESPASGSAFG-- 551
Query: 324 TEDKPTDAKPAFSFG----AKPSGTEQAGKPAF---SFGSKPVAPEPSKPSNDKPESKQG 376
KP+ P+F G P+ GKP+F SFGS + EP P++ K
Sbjct: 552 ---KPSFGTPSFGSGNSSVEPPASGSAFGKPSFGTPSFGSGNSSAEP--PASGSAFGKPS 606
Query: 377 FAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFGNKTE 436
F + S ET SG G S + L N T SKP + +
Sbjct: 607 FGTSAFGTASSNETNSGSIFGKAAFGSSSFAPANNELFGSNF----TISKPTV---DSPK 659
Query: 437 DTKSASKAAFSFDNKTDGSKSE---SKPSFALGSNTSENKADPSPAFSLGAXXXXXXXXX 493
+ S S S D D SKS+ S F NTS + F +
Sbjct: 660 EVDSTSPFPSSGDQSEDESKSDVDSSSTPFGTKPNTSTKPKTNAFDFGSSSFGSGFSKAL 719
Query: 494 XXXXXXXAFSFGSK--PADSR-------TSDTKVDSK-PAFSFGSKPAETTASKDTKTEA 543
F FG++ P S+ +S TK D++ + S GS +++ ++
Sbjct: 720 ESVGSDTTFKFGTQASPFSSQLGNKSPFSSFTKDDTENGSLSKGSTSEINDDNEEHESNG 779
Query: 544 PSFSLGGLKPDTTKETTES 562
P+ S L T ++T+ +
Sbjct: 780 PNVSGNDLTDSTVEQTSST 798
>7296503 [Y] KOG2992 Nucleolar GTPase/ATPase p130
Length = 688
Score = 52.8 bits (125), Expect = 2e-06
Identities = 72/298 (24%), Positives = 114/298 (38%), Gaps = 31/298 (10%)
Query: 257 ETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAKT 316
E +KP AT+ T PA + S++ + KP+ +KP K + AK
Sbjct: 175 EPAKPAVKATT------TKVAPAKKADSSSEESSSDEETKPA------AKPVAKAAPAKK 222
Query: 317 GFSFG--SKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSNDKPESK 374
S S ++D+P KPA AKP+ A S + V P + P +K
Sbjct: 223 AASSSEESDSDDEPAAKKPAVQPAAKPAPKAAASSSEDSSSEEEVKPAAKSAAKLAP-AK 281
Query: 375 QGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFGNK 434
+G + + S + E K +L ++ P K S +++ DD K + K
Sbjct: 282 KGASSSDDSSSEDEAPKKAATLAKPISKAAPTKKADSSTED-SSSEDDAPKKVAPA---K 337
Query: 435 TEDTKS--ASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXXXXXX 492
K+ A KAA S D S E P A + + KA P+ + +
Sbjct: 338 ATPAKAIPAKKAASS----DDSSSEEEAPKKAAPAKATPAKATPAKK-AASSDDSSSEEE 392
Query: 493 XXXXXXXXAFSFGSKPADSRTSDTKVD-----SKPAFSFGSKPAETTASKDTKTEAPS 545
A + +K A S + D+ D KPA +K A + S ++ E P+
Sbjct: 393 APKKAAAPAKATPAKKAKSSSEDSDSDEEEAPKKPAAKAVAKAASSEDSDSSEDEKPA 450
>7296502 [Y] KOG2992 Nucleolar GTPase/ATPase p130
Length = 654
Score = 52.8 bits (125), Expect = 2e-06
Identities = 72/298 (24%), Positives = 114/298 (38%), Gaps = 31/298 (10%)
Query: 257 ETSKPNTNATSLFGGNHTDTKPAGATSGFNFGSAAGDANKPSFSLSLGSKPEEKTSGAKT 316
E +KP AT+ T PA + S++ + KP+ +KP K + AK
Sbjct: 175 EPAKPAVKATT------TKVAPAKKADSSSEESSSDEETKPA------AKPVAKAAPAKK 222
Query: 317 GFSFG--SKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFSFGSKPVAPEPSKPSNDKPESK 374
S S ++D+P KPA AKP+ A S + V P + P +K
Sbjct: 223 AASSSEESDSDDEPAAKKPAVQPAAKPAPKAAASSSEDSSSEEEVKPAAKSAAKLAP-AK 281
Query: 375 QGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSLGSLNTNADDTESKPGFSFGNK 434
+G + + S + E K +L ++ P K S +++ DD K + K
Sbjct: 282 KGASSSDDSSSEDEAPKKAATLAKPISKAAPTKKADSSTED-SSSEDDAPKKVAPA---K 337
Query: 435 TEDTKS--ASKAAFSFDNKTDGSKSESKPSFALGSNTSENKADPSPAFSLGAXXXXXXXX 492
K+ A KAA S D S E P A + + KA P+ + +
Sbjct: 338 ATPAKAIPAKKAASS----DDSSSEEEAPKKAAPAKATPAKATPAKK-AASSDDSSSEEE 392
Query: 493 XXXXXXXXAFSFGSKPADSRTSDTKVD-----SKPAFSFGSKPAETTASKDTKTEAPS 545
A + +K A S + D+ D KPA +K A + S ++ E P+
Sbjct: 393 APKKAAAPAKATPAKKAKSSSEDSDSDEEEAPKKPAAKAVAKAASSEDSDSSEDEKPA 450
>SPBC1711.05 [Y] KOG2992 Nucleolar GTPase/ATPase p130
Length = 451
Score = 51.6 bits (122), Expect = 5e-06
Identities = 49/275 (17%), Positives = 106/275 (37%), Gaps = 7/275 (2%)
Query: 294 ANKPSFSLSLGSKPEEKTSGAKTGFSFGSKTEDKPTDAKPAFSFGAKPSGTEQAGKPAFS 353
+N S +S P EK + GS +++ + + + S ++ + + + + S
Sbjct: 79 SNDDSQKISKKGAPPEKAHSSSEASGSGSSSDESDSSSSESES-SSEDNDSSSSSSDSES 137
Query: 354 FGSKPVAPEPSKPSNDKPESKQGFAFNVKSGNSKEETKSGFSLGSKTEESKPASKMGFSL 413
S + S S+ + ES + + S +S E S S + S S+
Sbjct: 138 ESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSED 197
Query: 414 GSLNTNADDTESKPGFSFGNKTEDTKSASKAAFSFDNKTDGSKSESKPSFALGSNTSENK 473
++++ D+ES+ + + + S+ + S DN + S S+S+ + + S +
Sbjct: 198 SDSSSSSSDSESESSSEGSDSSSSSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSS 257
Query: 474 ADPSPAFSLGAXXXXXXXXXXXXXXXXAFS------FGSKPADSRTSDTKVDSKPAFSFG 527
+ S + S + S S+ +DS +S + DS + G
Sbjct: 258 SSDSESESSSKDSDSSSNSSDSEDDSSSDSSDSESESSSEDSDSTSSSSDSDSSSSSEDG 317
Query: 528 SKPAETTASKDTKTEAPSFSLGGLKPDTTKETTES 562
+ +TT S + ++ + S + + K+ S
Sbjct: 318 NSNTDTTTSGEVSAQSSTNSTSSEESTSVKDEDSS 352
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.304 0.122 0.333
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,501,178
Number of Sequences: 60738
Number of extensions: 1563022
Number of successful extensions: 4827
Number of sequences better than 1.0e-05: 25
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 4322
Number of HSP's gapped (non-prelim): 147
length of query: 780
length of database: 30,389,216
effective HSP length: 114
effective length of query: 666
effective length of database: 23,465,084
effective search space: 15627745944
effective search space used: 15627745944
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)