ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV3120    suspect: LH   S     KOG4624  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV3120 1083537  1083845 103  
         (103 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YKL137w [S] KOG4624 Uncharacterized conserved protein                 111   2e-25

>YKL137w [S] KOG4624 Uncharacterized conserved protein
          Length = 103

 Score =  111 bits (277), Expect = 2e-25
 Identities = 50/98 (51%), Positives = 71/98 (72%), Gaps = 1/98 (1%)

Query: 5   VGKHNQRLPIWVLNPTEEKEARQNLKKFAYAQCVEYVEAMVECSKIHGLKLFPACNEPRD 64
           + KH+ RLPIWVL+P EE++AR+NLK   Y +C  +V+AM +C+K +G+K+FP C++ RD
Sbjct: 2   ISKHSSRLPIWVLSPREEQQARKNLKTETYKKCANFVQAMADCAKANGMKVFPTCDKQRD 61

Query: 65  AMRKCILSYQKDSN-LDRQRDLIVERKIERLEDLLKKQ 101
            M+ C+L YQ D   LD +RD IV  KI +LE L +KQ
Sbjct: 62  EMKSCLLFYQTDEKYLDGERDKIVLEKINKLEKLCQKQ 99


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.318    0.134    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,508,471
Number of Sequences: 60738
Number of extensions: 246375
Number of successful extensions: 760
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 758
Number of HSP's gapped (non-prelim): 1
length of query: 103
length of database: 30,389,216
effective HSP length: 79
effective length of query: 24
effective length of database: 25,590,914
effective search space: 614181936
effective search space used: 614181936
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)