ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV3241 suspect: %id R KOG3394 General function prediction only Protein OS-9
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV3241 1124120 1122750 -457
(457 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR057w [R] KOG3394 Protein OS-9 94 4e-19
SPAC227.11c [R] KOG3394 Protein OS-9 58 3e-08
At5g35080 [R] KOG3394 Protein OS-9 56 1e-07
CE25700 [R] KOG3394 Protein OS-9 51 3e-06
>YDR057w [R] KOG3394 Protein OS-9
Length = 542
Score = 94.0 bits (232), Expect = 4e-19
Identities = 87/361 (24%), Positives = 151/361 (41%), Gaps = 36/361 (9%)
Query: 24 NPYSSTPYSLKYVDEQEFLS-VIDNETLLQEGRLFRPYEGSDVLCYQRNTSSLIQHHEED 82
+P S Y + Y+DE ++ ++ N++++ G + G D+ C+ +N S+ + ED
Sbjct: 28 DPIVSNKYLISYIDEDDWSDRILQNQSVMNSGYIVNM--GDDLECFIQNASTQLNDVLED 85
Query: 83 T---FNSE--GALIEAVNM-VNAILAPNPIEMNTVPISYWTYIISSGETRTVVQKGYFGE 136
+ NSE L + +N V I +W Y G +
Sbjct: 86 SNEHSNSEKTALLTKTLNQGVKTIFDKLNERCIFYQAGFWIYEYCPGIEFVQFHGRVNTK 145
Query: 137 TYLLGNSSNYNSTIDYHFAKSKTG-------------RVYLSETLVDGCTCDLTHKPREV 183
T G N + ++ Y K K Y+SE + G CD+T R V
Sbjct: 146 T---GEIVNRDESLVYRLGKPKANVEEREFELLYDDVGYYISEIIGSGDICDVTGAERMV 202
Query: 184 EIQYICPKRPLSRPFHLEVREIQSCKYQLRLFLPQLCELSSFNPLLGQLSEHNIICHR-S 242
EIQY+C VRE + C Y+ ++ +P+LC L Q + I+C +
Sbjct: 203 EIQYVCGGSNSGPSTIQWVRETKICVYEAQVTIPELCNLELLAKNEDQKNASPILCRMPA 262
Query: 243 GSKL-SPALDIFNRYSATVLDHGIYLLKPKNS-AKDRRQLMYHAAEPLDSQTTLFELTVE 300
SK+ S ++D+ +Y L GIY L+P N+ +D+ + +A D +
Sbjct: 263 KSKIGSNSIDLITKYEPIFLGSGIYFLRPFNTDERDKLMVTDNAMSNWDE--------IT 314
Query: 301 ERFIGDFISSLKKLIGSDFIQSPTGKSIKPGDLFLWRAPVVDETGNLLFLIDLELNSASE 360
E + F +++ K++ + P G ++PGD +W A VVD + L + ++
Sbjct: 315 ETYYQKFGNAINKMLSLRLVSLPNGHILQPGDSCVWLAEVVDMKDRFQTTLSLNILNSQR 374
Query: 361 A 361
A
Sbjct: 375 A 375
>SPAC227.11c [R] KOG3394 Protein OS-9
Length = 322
Score = 57.8 bits (138), Expect = 3e-08
Identities = 53/230 (23%), Positives = 96/230 (41%), Gaps = 20/230 (8%)
Query: 64 DVLCYQRNTSSLIQHHE-EDTFNSEGALIEAVNMVNAILAPNPIEMNTVPISYWTYIISS 122
+ C N S + Q+ E +++ + I+ +N + IE YWTY
Sbjct: 85 EYFCVYPNASLIKQNSTTEPSYDLQELRIQGTEKINELANVFLIENR----GYWTYDYVY 140
Query: 123 G--------ETRTVVQKGYFGETYLLGNSSNYNS--TIDYHFAKSKT-GRVYLSETLVDG 171
G E + K Y+LG + N + ++ ++A G+ YL T +G
Sbjct: 141 GQHVRQYHLEPQQGSDKVLANPMYILGTAPNTQTKKNLEENWAIGFVEGKAYLQTTFRNG 200
Query: 172 CTCDLTHKPREVEIQYICPKRPLSRPFHLEVREIQSCKYQLRLFLPQLCELSSFNPLLGQ 231
CD+T +PR V + Y C P + +E+ SC Y + + +P LC L +F +
Sbjct: 201 TMCDITKRPRHVILSYECSTNS-DTPEITQYQEVSSCAYSMTIHVPGLCSLPAFK-IQED 258
Query: 232 LSEHNIICHRSGSKLSPALDIFNRYSATVLDHGIYLLKPKNSAKDRRQLM 281
+ I+C+ + S +D ++ S V+D P+ + + +M
Sbjct: 259 IPSEKIVCYNVIKEKSNEVD--HKDSQHVVDEVAQTSPPEVKEVETQSMM 306
>At5g35080 [R] KOG3394 Protein OS-9
Length = 217
Score = 55.8 bits (133), Expect = 1e-07
Identities = 35/113 (30%), Positives = 59/113 (51%), Gaps = 8/113 (7%)
Query: 128 VVQKGYFGETYLLGNSSNYNSTIDYHFAKSKTGRVYLSETLVDGCTCDLTHKPREVEIQY 187
+VQ+ + G T+ ++ +N T+ A + + Y S +G TCDLT PREVE+++
Sbjct: 86 IVQEFFLG-TFDPEATAAFNQTVSD--ASTDASQRYHSHVYTNGTTCDLTGSPREVEVRF 142
Query: 188 ICPKRPLSRPFHLEVREIQSCKYQLRLFLPQLCELSSFNPLLGQLSEHNIICH 240
+C + +R + E+ +CKY L + P LC+ F L + H I C+
Sbjct: 143 VCAE---TRAMVTSITELSTCKYALTVQCPTLCKHPLFQ--LEKPVSHTIHCN 190
>CE25700 [R] KOG3394 Protein OS-9
Length = 426
Score = 51.2 bits (121), Expect = 3e-06
Identities = 42/146 (28%), Positives = 65/146 (43%), Gaps = 21/146 (14%)
Query: 115 YWTYIISSGETRTVVQ-------KGYFGET-YLLGNSSNYNSTIDYHFAKSKTGRV---- 162
YWTY + G R V+Q G T + LGN + + K T R+
Sbjct: 116 YWTYQVCHG--RYVIQYHEDKMLTGQVSRTEFYLGNFDSALTASTNEQVKPATRRIENED 173
Query: 163 --YLSETLVDGCTCDLTH-KPREVEIQYICPKRPLSRPFHLEVREIQSCKYQLRLFLPQL 219
Y S + G +CD+T KPR ++ YIC ++ + L V EI SC Y++ + L
Sbjct: 174 YPYYSVSYNHGTSCDVTGGKPRTTDVVYICVEKVQHKI--LSVTEISSCHYEIVIMTDLL 231
Query: 220 CELSSFNPLLGQLSEHNIICHRSGSK 245
C+ + L + +H I+C +K
Sbjct: 232 CKHPEYQ--LSEKKDHKIVCWNEDAK 255
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.135 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,266,534
Number of Sequences: 60738
Number of extensions: 1212051
Number of successful extensions: 2860
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2854
Number of HSP's gapped (non-prelim): 5
length of query: 457
length of database: 30,389,216
effective HSP length: 110
effective length of query: 347
effective length of database: 23,708,036
effective search space: 8226688492
effective search space used: 8226688492
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)