ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV3399 good R KOG4680 General function prediction only Uncharacterized conserved protein, contains ML domain
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV3399 1177801 1178319 173
(173 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL046w [R] KOG4680 Uncharacterized conserved protein contains M... 203 1e-52
SPAPB8E5.04c [R] KOG4680 Uncharacterized conserved protein conta... 113 1e-25
At3g11780 [R] KOG4680 Uncharacterized conserved protein contains... 52 4e-07
>YDL046w [R] KOG4680 Uncharacterized conserved protein contains ML domain
Length = 173
Score = 203 bits (516), Expect = 1e-52
Identities = 96/141 (68%), Positives = 113/141 (80%)
Query: 31 PPSANKPIPGDSPLLQCDVDQSQSLDVTQVNLVPNPPQRGENLTIAAAGVLQTTIEEGAY 90
PP KPI G+SPL QCD+ Q +++ +VNL PNPP RGENLTI+A G + TIEEGAY
Sbjct: 31 PPPNTKPINGESPLYQCDILDKQLVEIKEVNLDPNPPVRGENLTISANGEVFETIEEGAY 90
Query: 91 IDIEVRLGYIKLISQTYDLCEQLEENDIDGLKCPIEEGVYELNKIVEIPSEVPPGKYSVI 150
ID+EVRLGYI+L+SQT+DLCE LE+NDI+GL CPIE G Y + KIVEIP EVPPGKY V+
Sbjct: 91 IDVEVRLGYIRLLSQTFDLCETLEDNDIEGLSCPIEPGEYNIKKIVEIPGEVPPGKYVVV 150
Query: 151 ARAYNVDDEQITCLTGEVIFP 171
ARAY D+ ITCLTGEVIFP
Sbjct: 151 ARAYTEKDDLITCLTGEVIFP 171
>SPAPB8E5.04c [R] KOG4680 Uncharacterized conserved protein contains ML domain
Length = 188
Score = 113 bits (283), Expect = 1e-25
Identities = 52/140 (37%), Positives = 89/140 (63%), Gaps = 4/140 (2%)
Query: 33 SANKPIPGDSPLLQC-DVDQSQS-LDVTQVNLVPNPPQRGENLTIAAAGVLQTTIEEGAY 90
S ++ IPG +P C D D+ + V +NL+PNPP G+NLTI + TT+ G+Y
Sbjct: 39 STSEKIPGANPASYCADWDRGDDHVVVDYINLIPNPPAAGKNLTIETEINVGTTVLNGSY 98
Query: 91 IDIEVRLGYIKLISQTYDLCEQLEENDIDGLKCPIEEGVYELNKIVEIPSEVPPGKYSVI 150
+DI+V+ G+++++++ D+C++ E + ++CP+E G+ + +P +PPG+Y V+
Sbjct: 99 VDIQVKYGFVRIVNERLDICDKAYE--LAAVECPVEPGIITKQATISLPWAIPPGRYHVL 156
Query: 151 ARAYNVDDEQITCLTGEVIF 170
A AYN D EQ+TC++ V F
Sbjct: 157 ATAYNADGEQLTCVSASVSF 176
>At3g11780 [R] KOG4680 Uncharacterized conserved protein contains ML domain
Length = 153
Score = 52.0 bits (123), Expect = 4e-07
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 47 CDVDQSQSLDVTQVNLVPNPPQRGENLTIAAAGVLQTTIEEGAYIDIEVRLGYIKLISQT 106
CD ++ + V V++ P P RGE T + T I G + IEV + S+T
Sbjct: 30 CDNNEEYEVKVQGVDITPYPIARGEPATFRISANTDTEISSGKLV-IEVSYFGWHIHSET 88
Query: 107 YDLCEQLEENDIDGLKCPIEEGVYELNKIVEIPSEVPPGKYSVIARAYNVDDEQITCL 164
+DLC++ CP+ G + + +P PPG YS+ + + +++TC+
Sbjct: 89 HDLCDETS--------CPVAIGDFLVAHSQVLPGYTPPGSYSLKMKMLDGRKKELTCI 138
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.138 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,505,414
Number of Sequences: 60738
Number of extensions: 450224
Number of successful extensions: 900
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 896
Number of HSP's gapped (non-prelim): 3
length of query: 173
length of database: 30,389,216
effective HSP length: 99
effective length of query: 74
effective length of database: 24,376,154
effective search space: 1803835396
effective search space used: 1803835396
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)