ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV3434 good R KOG1721 General function prediction only FOG: Zn-finger
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV3434 1190527 1188326 -734
(734 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR022c [R] KOG1721 FOG: Zn-finger 662 0.0
SPAC1039.05c [R] KOG1721 FOG: Zn-finger 137 8e-32
SPBC1198.04c [R] KOG1721 FOG: Zn-finger 95 3e-19
>YPR022c [R] KOG1721 FOG: Zn-finger
Length = 1133
Score = 662 bits (1709), Expect = 0.0
Identities = 362/824 (43%), Positives = 502/824 (59%), Gaps = 100/824 (12%)
Query: 2 VPPQQQSYDPEXXXXXXXXXXXXXIVDDLFSVDFLPTDPLQTLVQQMSYNDII------- 54
+PPQ DP ++ DLFS +FL +DPLQ+ +Q++S +
Sbjct: 317 LPPQNPFGDP---LTSSSSGANLSVMQDLFSTNFLNSDPLQSFMQELSEAPQVSIEDTFS 373
Query: 55 ----------PQQSGESVATPSNAGSVTSSIDSVPNRSPKFKDVGKENIKDNLLAQKSKV 104
P Q E P + +P PKF D ++KDNL +QK +
Sbjct: 374 DKNTIPPNEKPVQQDEGFQNPPVMFELPQDNIKIPKAQPKFNDNPSTSVKDNLSSQKLNI 433
Query: 105 GELKSQLKRSATVSTVESDSHRLSKKQ-RSKLISRPSFFNIDPNSKFKLSLERQGTLALL 163
ELK +RS+ S V ++S K+Q R + S PSFF+ DP +K+K+S E+ +
Sbjct: 434 NELK---RRSSKDSGVGNNSSLNYKEQLRHSMKSVPSFFHPDPLTKYKISKEKCQEMFSF 490
Query: 164 IADVKYIMLNKLQTALKSYWLNFHPQYPILHKPSFDIEKEPPILILSMIMTGASYLGSAT 223
+ +++Y+ + + +LKS+WLNFHPQY +LHKPSF ++K+P IL L++IMTGAS+LGS
Sbjct: 491 VPELRYVSIESIHKSLKSFWLNFHPQYGLLHKPSFHVDKQPAILNLALIMTGASFLGSEY 550
Query: 224 RRTISDVIAGPLRWLIFSHEDFQPPSETYIIQSLLLLECYEKTSTNRYLHERSYLHHGTT 283
R ISD I GPLRW+IFSH DFQPPS+TYIIQSLLL+E YEKTSTNRYLHERS+LHHGTT
Sbjct: 551 REQISDPICGPLRWIIFSHADFQPPSKTYIIQSLLLVEGYEKTSTNRYLHERSFLHHGTT 610
Query: 284 IQLLRRTPSLGGHPLRVK--KEQSPSNYESMEVIYKNWIDFETLKRTALYAFYIDTTHAV 341
IQLLRRTPSLGGHPL VK K ++ + + +YK WIDFE LKR A YAFY+DTTHAV
Sbjct: 611 IQLLRRTPSLGGHPLMVKTGKTSGENSIQDPQEVYKRWIDFEMLKRIAFYAFYMDTTHAV 670
Query: 342 VFGYTYLFIHCNQVRISLPCSDEIWDSYDLSLDKLLQHGFGS----KDISFLDALKELLN 397
VFGY LFI+ NQ++++LPC D++W+SYDLS + L++HG+GS ++ +FL AL +L+
Sbjct: 671 VFGYWNLFINSNQIQLTLPCPDQVWESYDLSYETLMEHGYGSTKRDENNTFLSALMQLMK 730
Query: 398 HVMHQLQRSN-------------------NTNSWTKLKTSKFGNKLLLSGLISIMFQLQQ 438
+V+ L+ +N +T W S FG K+LL+G+ISI+FQ Q+
Sbjct: 731 NVIQILRNNNIRRNKVNNGGIESTPTDLESTTDWN--IQSLFGKKILLAGIISILFQCQE 788
Query: 439 H---SEVISLGADNPLSVQNIHWQEIISFAIDYWHQEVMHGCNNSSNSVLS--------- 486
I+ + W++I+SFA++YW EV C + +S
Sbjct: 789 EVNGDYFITNFRGGITDHLGLSWKDILSFAMNYWLHEVQKSCTDPKACRISTPSEETLTN 848
Query: 487 ------HIDAVDDEGIKLLRLDDVRSCKIPAYHMTQIILRIFQYDYYIYVGAPWRMNVRA 540
+ D + D+ + LL D+ +CKIP H++QI+LRI +DYYIY GAPWRMNV
Sbjct: 849 RKIDEDNGDGLCDDDLDLLSSDNPSNCKIPVIHISQIVLRILHHDYYIYAGAPWRMNVPI 908
Query: 541 GTEEYALVSERILKFSQDPMQGGMAIIYAYMFLFEMFHNGED------MSCDVNLDYCIT 594
G +EY ++S RIL+F++DP GG+A++YA+ FLFEMF E+ S ++N D IT
Sbjct: 909 GRDEYDMISRRILQFAKDPYNGGVAVVYAFQFLFEMFIIKENNVPTVVKSYNINSDPVIT 968
Query: 595 RPNTLALTTLLIWSYNYSLYGPETHIWDNS---------PDAS----------------L 629
RP +ALT+LLIWS N++L+G E IWDN+ PD S
Sbjct: 969 RPYAIALTSLLIWSCNFALHGCEVSIWDNTEASKDECFQPDDSNGGNILGNTDNNGSTIA 1028
Query: 630 KMNMKVKSEYVPIETFQQHLKKMYRYLKVKENLDVFTHHQQLKEKARLLRNIPNTNHLAG 689
N+K K+ Y+PIE+F+ +L +MYR L V +LDV + + KA LL++I NT+ L G
Sbjct: 1029 NNNLKEKNNYIPIESFEVYLLRMYRNLYVDSSLDVVSFQNDVWAKASLLQHISNTHFLCG 1088
Query: 690 MMLFMRDMFHGCYWELGREFSNLFDNCLERSIGREKAVCEHMYE 733
MM FMRD+F+ YW+LGREF LFDNCLERS+G+ C +M++
Sbjct: 1089 MMQFMRDIFNKSYWDLGREFGKLFDNCLERSLGKTSPTCHNMFD 1132
>SPAC1039.05c [R] KOG1721 FOG: Zn-finger
Length = 781
Score = 137 bits (344), Expect = 8e-32
Identities = 115/457 (25%), Positives = 207/457 (45%), Gaps = 62/457 (13%)
Query: 167 VKYIMLNKLQTALKSYWLNFHPQYPILHKPSFDIEKEPPILILSMIMTGASYLGSATRRT 226
++YI +++ + YW +FHP++P LH+ + +++ P L+L+MI G ++G A +
Sbjct: 298 LQYITRSRVNLWIAHYWKDFHPRWPFLHRGTLKVDEAPVELLLAMITMGMHFVGDAFAYS 357
Query: 227 ISDVIAGPLRWLIFSHEDFQPPSETYIIQSLLLLECYEKTSTNRYLHERSYLHHGTTIQL 286
I+ I LR+ I++H DF+PP+ ++ Q+LL+ E +EK ++ H S + HG TI+
Sbjct: 358 IAVSIHSTLRFSIYTHPDFKPPASLWVYQALLIAEIFEKMTSTVEQHNLSQIFHGVTIES 417
Query: 287 LRRTPSLGGHPLRVKKEQSPSNYESMEVI---YKNWIDFETLKRTALYAFYIDTTHAVVF 343
++ G E+ P N + + W+D E KR A ++F +D+ H ++F
Sbjct: 418 MQN----GLSSKDTVTEKIPKNMTGTNIAQHKWHQWVDREASKRIAFFSFVLDSQHVILF 473
Query: 344 GYTYLFIHCNQVRISLPCSDEIW--DSYDLSLDKLLQHGFGSKDISFLDALKELLNHVMH 401
GY L I V + L C + +W DSY+ L + + F LK L
Sbjct: 474 GYRPL-IDITSVGLPLLCDEALWNADSYEAWTSLLNE----NDPPHFFPVLKMFL----- 523
Query: 402 QLQRSNNTNSWTKLKTSKFGNKLLLSGLISIMFQLQQHS--EVISLGADNPLSVQNIHWQ 459
TN K S + ++L GL +I + L + + V ++ +N +++N W+
Sbjct: 524 -------TNEHLPPKLSPWNMMIVLHGLTTIGWILSRENLGIVENIMQNNGTNLKN--WR 574
Query: 460 EIISFAIDYWHQEVMHGCNNSSNSVLSHIDAVDDEGIKLLRLDDVRSCKIPAYHMTQIIL 519
++ + +W + N+ L+H VR C + Y + I L
Sbjct: 575 ILLKASYKFWLRTYRVFFLNNGTLPLNH--------------PYVRGC-LATYELAHISL 619
Query: 520 --RIFQYDYYIYVGAPWRMNVRAGTEEYA---LVSERILKFSQDPMQGGMAIIYAYMFLF 574
I Y + A T Y L S+ S+ ++ + ++ A++
Sbjct: 620 HTNIVALQTYAKSIVSTSRRLYASTSRYVSAWLASDD----SEVSIKHAVDMVEAFL--- 672
Query: 575 EMFHNGEDMSCDVNLDYCITRPNTLALTTLLIWSYNY 611
G DM DV + + RP L ++TL++W+Y Y
Sbjct: 673 -----GGDMEYDVQNETGLHRPWCLYVSTLILWAYGY 704
>SPBC1198.04c [R] KOG1721 FOG: Zn-finger
Length = 897
Score = 95.1 bits (235), Expect = 3e-19
Identities = 77/302 (25%), Positives = 139/302 (45%), Gaps = 20/302 (6%)
Query: 172 LNKLQTALKSYWLNFHPQYPILHKPSFDIEKEPPILILSMIMTGASYLGSATRRTISDVI 231
L + + L +YW FH ++PILH+ +F I + P L+LSMI G + R+++ I
Sbjct: 412 LESVSSWLNAYWSMFHVRWPILHRGTFQITQAPLDLLLSMITLGMHSSNDLSIRSLAVEI 471
Query: 232 AGPLRWLIFSHEDFQPPSETYIIQSLLLLECYEKTSTNRYLHERSYLHHGTTIQLLRRTP 291
LR+ I+ ++F PP ++ Q+L L++ +E ++N H + + H I+ +R+
Sbjct: 472 HTTLRYNIYQKQEFGPPVSLWVYQALFLIQVFELFTSNLKQHRLAQMFHPVLIEAMRQ-- 529
Query: 292 SLGGHPLRVKKEQ-SPSNYESMEVIYKNWIDFETLKRTALYAFYIDTTHAVVFGYTYLFI 350
++ L V+ E SN + WI E++KR A + F +D+T +VFG L +
Sbjct: 530 AIPSDALTVRSETFGESNTPLTLQQWHKWITRESVKRIAFFVFALDSTSTLVFGNQPL-L 588
Query: 351 HCNQVRISLPCSDEIWDSYDLSLDKLLQHGFGSKDISFLDALKELLNHVMHQLQRSNNTN 410
+ V + L + W++ + + + I H++ +
Sbjct: 589 YVTDVSMPLLAEEHHWEAENFEVWAAQKPTIEPPTIL----------HMLKAFVQCEQCE 638
Query: 411 SWTKLKTSKFGNKLLLSGLISIMFQLQQHSEVISLGADNPLSVQNIH-WQEIISFAIDYW 469
S K S + LLL GL+S+ L+Q V + LS + I W ++ A W
Sbjct: 639 S-PLPKLSPWNMLLLLHGLLSVDISLKQKKFVPGM----KLSKREIDGWCSLVFEAYQKW 693
Query: 470 HQ 471
++
Sbjct: 694 NR 695
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,422,619
Number of Sequences: 60738
Number of extensions: 1902160
Number of successful extensions: 4966
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 4950
Number of HSP's gapped (non-prelim): 5
length of query: 734
length of database: 30,389,216
effective HSP length: 114
effective length of query: 620
effective length of database: 23,465,084
effective search space: 14548352080
effective search space used: 14548352080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)