ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV3474 good J KOG2049 Translation, ribosomal structure and biogenesis Translational repressor MPT5/PUF4 and related RNA-binding proteins (Puf superfamily)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV3474 1204183 1201718 -822
(822 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL178w [J] KOG2049 Translational repressor MPT5/PUF4 and relate... 614 e-175
YGL014w [J] KOG2049 Translational repressor MPT5/PUF4 and relate... 172 2e-42
SPAC6G9.14 [J] KOG2049 Translational repressor MPT5/PUF4 and rel... 155 2e-37
SPAC4G8.03c [J] KOG2049 Translational repressor MPT5/PUF4 and re... 139 2e-32
Hs13491168 [J] KOG1488 Translational repressor Pumilio/PUF3 and ... 138 3e-32
7299139 [J] KOG1488 Translational repressor Pumilio/PUF3 and rel... 137 7e-32
At5g56510 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 135 3e-31
At1g22240 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 135 3e-31
At1g78160 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 135 3e-31
At1g35730 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 129 2e-29
ECU11g1730 [J] KOG1488 Translational repressor Pumilio/PUF3 and ... 129 2e-29
At4g08840 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 129 2e-29
At3g10360 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 127 7e-29
Hs13491166 [J] KOG1488 Translational repressor Pumilio/PUF3 and ... 126 2e-28
YLL013c [J] KOG1488 Translational repressor Pumilio/PUF3 and rel... 125 3e-28
At2g29190 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 125 3e-28
At2g29200 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 124 8e-28
At2g29140 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 123 1e-27
SPAC1687.22c [J] KOG1488 Translational repressor Pumilio/PUF3 an... 119 2e-26
At3g20250 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 115 4e-25
At4g25880 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 114 8e-25
CE05044 [J] KOG1488 Translational repressor Pumilio/PUF3 and rel... 109 1e-23
At1g35750 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 105 3e-22
CE01838 [J] KOG1488 Translational repressor Pumilio/PUF3 and rel... 100 2e-20
CE27529_2 [J] KOG1488 Translational repressor Pumilio/PUF3 and r... 74 1e-12
CE18393 [J] KOG1488 Translational repressor Pumilio/PUF3 and rel... 72 5e-12
At4g08560_2 [J] KOG2049 Translational repressor MPT5/PUF4 and re... 63 2e-09
CE01916 [J] KOG1488 Translational repressor Pumilio/PUF3 and rel... 60 1e-08
CE20960 [J] KOG1488 Translational repressor Pumilio/PUF3 and rel... 60 1e-08
SPBP35G2.14 [R] KOG4574 RNA-binding protein (contains RRM and Pu... 57 2e-07
SPBC56F2.08c [R] KOG4574 RNA-binding protein (contains RRM and P... 55 3e-07
At5g43110 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 54 1e-06
At5g43090 [J] KOG2049 Translational repressor MPT5/PUF4 and rela... 54 1e-06
YPR042c [R] KOG4574 RNA-binding protein (contains RRM and Pumili... 52 4e-06
>YGL178w [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 859
Score = 614 bits (1584), Expect = e-175
Identities = 344/657 (52%), Positives = 413/657 (62%), Gaps = 68/657 (10%)
Query: 1 MQFHHQPQLSVNSVQSVIEPVTPP-LGQMNSKNNHQRTHSLDLSGFNQFISNT-SPL--- 55
M ++HQPQLS+NSVQS++EPVTPP LGQMN+K NHQ+ HSLDLSGFNQFIS+T SPL
Sbjct: 26 MSYNHQPQLSINSVQSLLEPVTPPPLGQMNNKRNHQKAHSLDLSGFNQFISSTQSPLALM 85
Query: 56 -------NVNTMSPLXXXXXXXXXXXXXXXXXNAKNRMKSLPLINEFESILPPGGXXXXX 108
+ N+ SP + N LPLINEF+ L G
Sbjct: 86 NNTSTSNSANSFSP-----NPNAASNSTGLSASMANPPAILPLINEFD--LEMDGPRRKS 138
Query: 109 XXXXXXXXXXPNGSTSTS----RGTGARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 164
+G ++S + +
Sbjct: 139 SHDFTVVAPSNSGVNTSSLIMETPSSSVTPAASLRNFSNSNNAASKCGVDNSSFGLSSST 198
Query: 165 XXXMNDLHNIRLKDLDYVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLIL 224
M ++ + L+DLDY+KL+TDQ+GCRFLQ+KLETP ES+ VRDL++E + FFLDLIL
Sbjct: 199 SSSMVEISALPLRDLDYIKLATDQFGCRFLQKKLETPSESNMVRDLMYEQIKPFFLDLIL 258
Query: 225 DPFGNYLIQKLCDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMI 284
DPFGNYL+QKLCDYLT +QKT +I+ IYP+VFQISINQYGTRSLQKIIDTV+ + ID+I
Sbjct: 259 DPFGNYLVQKLCDYLTAEQKTLLIQTIYPNVFQISINQYGTRSLQKIIDTVDNEVQIDLI 318
Query: 285 IRGFSQEHTSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKH 344
I+GFSQE TSIEQVVTLINDLNGNHVIQKCIFKF P+ STHKH
Sbjct: 319 IKGFSQEFTSIEQVVTLINDLNGNHVIQKCIFKFSPSKFGFIIDAIVEQNNIITISTHKH 378
Query: 345 GCCVLQKLLSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFN 404
GCCVLQKLLSVCTLQQIFKISVKI+Q+LP LINDQFGNYIIQFL DIKELDFYLL E FN
Sbjct: 379 GCCVLQKLLSVCTLQQIFKISVKIVQFLPGLINDQFGNYIIQFLLDIKELDFYLLAELFN 438
Query: 405 KLSQKLCQLSCLKFSSNVVEKYIKKLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGDDVV 464
+LS +LCQLSCLKFSSNVVEK+IKKLF I+ ++ + DDV+
Sbjct: 439 RLSNELCQLSCLKFSSNVVEKFIKKLFRIITGFIVNNNGGASQRTAV-------ASDDVI 491
Query: 465 NASMGILLVIADIFMANITSLIRDNYGNYALQTLLDVRNYSAILEHPRN-NIVYNNP--- 520
NASM ILL DIF N+ LIRDN+GNYALQTLLDV+NYS +L + +N N + N
Sbjct: 492 NASMNILLTTIDIFTVNLNVLIRDNFGNYALQTLLDVKNYSPLLAYNKNSNAIGQNSSST 551
Query: 521 -RLASFSHEFTAKISNLIVITKELLPSIKNTSYAKKIKLKVRAYTELTGITFDDVTP--- 576
+F ++F+ KI NLIV+TKELLPSIK TSYAKKIKLKV+AY E TGI F D++P
Sbjct: 552 LNYGNFCNDFSLKIGNLIVLTKELLPSIKTTSYAKKIKLKVKAYAEATGIPFTDISPQVT 611
Query: 577 --------TKKKVNEPFRQQNKH----------------------HSRNFSLPSNAY 603
T N+ +N H H+R+FSLP+NAY
Sbjct: 612 AMSHNNLQTINNENKNPHNKNSHNHNHNHNHNHAHNNNNNNNQKSHTRHFSLPANAY 668
>YGL014w [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 888
Score = 172 bits (435), Expect = 2e-42
Identities = 115/375 (30%), Positives = 184/375 (48%), Gaps = 67/375 (17%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
L DQ+GCRFLQ++L+ + D IFE ++ ++L+ D FGNYLIQKL + +TT+Q
Sbjct: 571 LCKDQHGCRFLQKQLDIL--GSKAADAIFEETKDYTVELMTDSFGNYLIQKLLEEVTTEQ 628
Query: 244 KTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLIN 303
+ + K P +IS+N +GTR+LQK+I+ ++T E +++ V L
Sbjct: 629 RIVLTKISSPHFVEISLNPHGTRALQKLIECIKTDEEAQIVVDSLR------PYTVQLSK 682
Query: 304 DLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQIFK 363
DLNGNHVIQKC+ + +P +TH+HGCCVLQ+ L T +Q
Sbjct: 683 DLNGNHVIQKCLQRLKP--ENFQFIFDAISDSCIDIATHRHGCCVLQRCLDHGTTEQCDN 740
Query: 364 ISVKIIQYLPSLINDQFGNYIIQFLF--DIKELDFYLLGETFNKLSQKLCQLSCLKFSSN 421
+ K++ + L D FGNY++Q++ + ++ + + + L + +LS KF SN
Sbjct: 741 LCDKLLALVDKLTLDPFGNYVVQYIITKEAEKNKYDYTHKIVHLLKPRAIELSIHKFGSN 800
Query: 422 VVEKYIKKLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGDDVVNASMGILLVIADIFMAN 481
V+EK +K +V+ M IL ++ +
Sbjct: 801 VIEKILKTA--------------------------------IVSEPM-ILEILNNGGETG 827
Query: 482 ITSLIRDNYGNYALQTLLDVRNYSAILEHPRNNIVYNNPRLASFSHEFTAKISNLIVITK 541
I SL+ D+YGNY LQT LD+ H +N+ +Y RL+ ++
Sbjct: 828 IQSLLNDSYGNYVLQTALDI-------SHKQNDYLYK--RLSE-------------IVAP 865
Query: 542 ELLPSIKNTSYAKKI 556
L+ I+NT + K+I
Sbjct: 866 LLVGPIRNTPHGKRI 880
Score = 57.4 bits (137), Expect = 9e-08
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 14/140 (10%)
Query: 182 VKLSTDQYGCRFLQRKLE--TPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQ----KL 235
+ ++T ++GC LQR L+ T ++ D + D + V+ L LDPFGNY++Q K
Sbjct: 714 IDIATHRHGCCVLQRCLDHGTTEQCDNLCDKLLALVDK----LTLDPFGNYVVQYIITKE 769
Query: 236 CDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSI 295
+ D ++ + P ++SI+++G+ ++KI+ T E + + I E T I
Sbjct: 770 AEKNKYDYTHKIVHLLKPRAIELSIHKFGSNVIEKILKTAIVSEPMILEILNNGGE-TGI 828
Query: 296 EQVVTLINDLNGNHVIQKCI 315
+ +L+ND GN+V+Q +
Sbjct: 829 Q---SLLNDSYGNYVLQTAL 845
>SPAC6G9.14 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 681
Score = 155 bits (393), Expect = 2e-37
Identities = 114/388 (29%), Positives = 180/388 (46%), Gaps = 72/388 (18%)
Query: 173 NIRLKDLDYVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLI 232
++ L++ + + DQ+GCR+LQR LE +S D +F + + L++D FGNYL
Sbjct: 340 SLSLQNSNILSFCKDQHGCRYLQRLLEKKNQSHI--DAVFAETHPYLAVLMVDAFGNYLC 397
Query: 233 QKLCDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEH 292
QKL ++ + Q++ I+ I P + IS N +GTR+LQKIID V + + I I+
Sbjct: 398 QKLFEHASEAQRSTFIQIIAPKLVPISFNMHGTRALQKIIDLVSSPDQISCIVNALR--- 454
Query: 293 TSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKL 352
VV L DLNGNHVIQKC+ KF + STH+HGCCV+Q+
Sbjct: 455 ---PNVVLLTKDLNGNHVIQKCLNKF--SQEDCQFIFDAICEDPLDVSTHRHGCCVVQRC 509
Query: 353 LSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQ 412
+ QI ++ I+ + +L+ D FGNY++Q++ ++ + + K+
Sbjct: 510 FDHASPAQIEQLVEHIVPHALTLVQDAFGNYVLQYVLELNNPNH--TEAIISYFLYKVRA 567
Query: 413 LSCLKFSSNVVEKYIKKLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGDDVVNASMGILL 472
LS KFSSNV+EK I FA A++ L
Sbjct: 568 LSTQKFSSNVMEKCI--FFA--------------------------------PAAIKEKL 593
Query: 473 VIADIFMANITSLIRDNYGNYALQTLLDVRNYSAILEHPRNNIVYNNPRLASFSHEFTAK 532
+ + ++ L+RD++ NY +QT LD + +
Sbjct: 594 ISELMDEKHLPKLLRDSFANYVIQTALD--------------------------NASVKQ 627
Query: 533 ISNLIVITKELLPSIKNTSYAKKIKLKV 560
+ L+ K L+PSIKNT ++I K+
Sbjct: 628 RAELVERIKPLIPSIKNTPCGRRILSKL 655
>SPAC4G8.03c [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 780
Score = 139 bits (349), Expect = 2e-32
Identities = 106/379 (27%), Positives = 170/379 (43%), Gaps = 74/379 (19%)
Query: 187 DQYGCRFLQRKLETPQESDQVR-DLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQKT 245
DQYGCR+LQ+ L+ E+ +V L F + + L++DPFGNY+ QKL Y + +QK
Sbjct: 473 DQYGCRYLQKLLD---ENPKVNASLFFPEIRQSVVQLMIDPFGNYMCQKLFVYASREQKL 529
Query: 246 AMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLINDL 305
+M+ I + I N YGTRS+Q IID + + E I ++++ I + TL D
Sbjct: 530 SMLNGIGEGIVDICSNLYGTRSMQNIIDKLTSNEQISLLLK------IIIPSLTTLACDN 583
Query: 306 NGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQIFKIS 365
NG HV+QKCI KF P +T++HGCC+LQ+ L ++
Sbjct: 584 NGTHVLQKCIAKFPP--EKLEPLFLSMEENLITLATNRHGCCILQRCLDRTNGDIQERLV 641
Query: 366 VKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSSNVVEK 425
II+ L+ + +GNY++Q + ++ + K +C+LS KFSSN +E+
Sbjct: 642 NSIIKSCLLLVQNAYGNYLVQHVLELNIQPY--TERIIEKFFGNICKLSLQKFSSNAIEQ 699
Query: 426 YIKKLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGDDVVNASMGILLVIADIFMANITSL 485
I+ +P R ++ + NI L
Sbjct: 700 CIR---------------------TASPSTREQ-------------MLQEFLSFPNIEQL 725
Query: 486 IRDNYGNYALQTLLDVRNYSAILEHPRNNIVYNNPRLASFSHEFTAKISNLIVITKELLP 545
+ D Y NY +Q L+V + S + ++ L S SH ++P
Sbjct: 726 LDDCYANYVMQRFLNVADES------QKFLI-----LRSISH---------------VIP 759
Query: 546 SIKNTSYAKKIKLKVRAYT 564
I+NT + + I K+ + T
Sbjct: 760 KIQNTRHGRHILAKLTSST 778
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/132 (21%), Positives = 70/132 (52%), Gaps = 7/132 (5%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
+ L+T+++GC LQR L+ + + +++ + ++ L L+ + +GNYL+Q + +
Sbjct: 613 ITLATNRHGCCILQRCLD--RTNGDIQERLVNSIIKSCLLLVQNAYGNYLVQHVLELNIQ 670
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
+I+ + ++ ++S+ ++ + ++++ I T M+ QE S + L
Sbjct: 671 PYTERIIEKFFGNICKLSLQKFSSNAIEQCIRTASPSTREQML-----QEFLSFPNIEQL 725
Query: 302 INDLNGNHVIQK 313
++D N+V+Q+
Sbjct: 726 LDDCYANYVMQR 737
>Hs13491168 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 1064
Score = 138 bits (348), Expect = 3e-32
Identities = 87/263 (33%), Positives = 139/263 (52%), Gaps = 19/263 (7%)
Query: 169 NDLHNIRLKDL--DYVKLSTDQYGCRFLQRKLE--TPQESDQVRDLIFENVNNFFLDLIL 224
N N++L+DL V+ S DQ+G RF+Q+KLE TP E R ++F + L+
Sbjct: 717 NRFPNLQLRDLIGHIVEFSQDQHGSRFIQQKLERATPAE----RQMVFNEILQAAYQLMT 772
Query: 225 DPFGNYLIQKLCDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMI 284
D FGNY+IQK ++ + DQK A+ I V +++ YG R +QK ++++ + + +M+
Sbjct: 773 DVFGNYVIQKFFEFGSLDQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQSEMV 832
Query: 285 IRGFSQEHTSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKH 344
V+ + D NGNHV+QKCI QP STH +
Sbjct: 833 -------KELDGHVLKCVKDQNGNHVVQKCIECVQP--QSLQFIIDAFKGQVFVLSTHPY 883
Query: 345 GCCVLQKLLSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFN 404
GC V+Q++L CT +Q I ++ Q+ L+ DQ+GNY+IQ + + + + +
Sbjct: 884 GCRVIQRILEHCTAEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPED--KSKIVS 941
Query: 405 KLSQKLCQLSCLKFSSNVVEKYI 427
++ K+ LS KF+SNVVEK +
Sbjct: 942 EIRGKVLALSQHKFASNVVEKCV 964
Score = 60.1 bits (144), Expect = 1e-08
Identities = 37/138 (26%), Positives = 67/138 (47%), Gaps = 2/138 (1%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
LST YGCR +QR LE + I E ++ L+ D +GNY+IQ + ++ +
Sbjct: 878 LSTHPYGCRVIQRILEHCTAEQTLP--ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPED 935
Query: 244 KTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLIN 303
K+ ++ +I V +S +++ + ++K + E +I Q + T++
Sbjct: 936 KSKIVSEIRGKVLALSQHKFASNVVEKCVTHASRAERALLIDEVCCQNDGPHSALYTMMK 995
Query: 304 DLNGNHVIQKCIFKFQPA 321
D N+V+QK I +PA
Sbjct: 996 DQYANYVVQKMIDMAEPA 1013
>7299139 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 1184
Score = 137 bits (345), Expect = 7e-32
Identities = 84/258 (32%), Positives = 139/258 (53%), Gaps = 17/258 (6%)
Query: 173 NIRLKDL--DYVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNY 230
N++L+DL V+ S DQ+G RF+Q+KLE ++ + ++F + L+ D FGNY
Sbjct: 757 NLQLRDLANHIVEFSQDQHGSRFIQQKLERATAAE--KQMVFSEILAAAYSLMTDVFGNY 814
Query: 231 LIQKLCDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQ 290
+IQK ++ T +QK + + V Q+++ YG R +QK ++++ ++ +++
Sbjct: 815 VIQKFFEFGTPEQKNTLGMQVKGHVLQLALQMYGCRVIQKALESISPEQQQEIV------ 868
Query: 291 EHTSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQ 350
H V+ + D NGNHV+QKCI P STH +GC V+Q
Sbjct: 869 -HELDGHVLKCVKDQNGNHVVQKCIECVDPVALQFIINAFKGQVYSL--STHPYGCRVIQ 925
Query: 351 KLLSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDI-KELDFYLLGETFNKLSQK 409
++L CT +Q I ++ ++ LI DQ+GNY+IQ + + K+ D +L N + K
Sbjct: 926 RILEHCTAEQTTPILDELHEHTEQLIQDQYGNYVIQHVLEHGKQEDKSIL---INSVRGK 982
Query: 410 LCQLSCLKFSSNVVEKYI 427
+ LS KF+SNVVEK +
Sbjct: 983 VLVLSQHKFASNVVEKCV 1000
Score = 55.1 bits (131), Expect = 4e-07
Identities = 36/139 (25%), Positives = 69/139 (48%), Gaps = 9/139 (6%)
Query: 184 LSTDQYGCRFLQRKLE--TPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
LST YGCR +QR LE T +++ + D + E+ LI D +GNY+IQ + ++
Sbjct: 914 LSTHPYGCRVIQRILEHCTAEQTTPILDELHEHTEQ----LIQDQYGNYVIQHVLEHGKQ 969
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
+ K+ +I + V +S +++ + ++K + E +I + ++ +
Sbjct: 970 EDKSILINSVRGKVLVLSQHKFASNVVEKCVTHATRGERTGLIDEVCTFNDNALH---VM 1026
Query: 302 INDLNGNHVIQKCIFKFQP 320
+ D N+V+QK I +P
Sbjct: 1027 MKDQYANYVVQKMIDVSEP 1045
>At5g56510 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 604
Score = 135 bits (340), Expect = 3e-31
Identities = 100/339 (29%), Positives = 164/339 (47%), Gaps = 47/339 (13%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
L+ DQ+GCRFLQR +D ++IF + ++ +L++DPFGNYL+QKL + DQ
Sbjct: 285 LAKDQHGCRFLQRIFSEKDGNDI--EMIFNEIIDYISELMMDPFGNYLVQKLLEVCNEDQ 342
Query: 244 KTAMIKDIYPS---VFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVT 300
+ ++ I + +IS + +GTR++QKI++T + +E I +II +V
Sbjct: 343 RMQIVHSITRKPGLLIKISCDMHGTRAVQKIVETAKREEEISIIISALK------HGIVH 396
Query: 301 LINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQ 360
LI ++NGNHV+Q+C+ P +T +HGCCVLQK L +Q
Sbjct: 397 LIKNVNGNHVVQRCLQYLLP--YCGKFLFEAAITHCVELATDRHGCCVLQKCLGYSEGEQ 454
Query: 361 IFKISVKIIQYLPSLINDQFG--------NYIIQFLFDIKELDFYLLGETFNKLSQKLCQ 412
+ +I L D FG NY++Q++F+++ + E +L +
Sbjct: 455 KQHLVSEIASNALLLSQDPFGIDANFFCRNYVLQYVFELQLQ--WATFEILEQLEGNYTE 512
Query: 413 LSCLKFSSNVVEKYIK--------KLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGDDVV 464
LS K SSNVVEK +K ++ ++NY L+P+ G+ V+
Sbjct: 513 LSMQKCSSNVVEKCLKLADDKHRARIIRELINY------GRLDQVMLDPY-----GNYVI 561
Query: 465 NASM-----GILLVIADIFMANITSLIRDNYGNYALQTL 498
A++ + ++ D NI+SL + YG L L
Sbjct: 562 QAALKQSKGNVHALLVDAIKLNISSLRTNPYGKKVLSAL 600
>At1g22240 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 515
Score = 135 bits (340), Expect = 3e-31
Identities = 81/245 (33%), Positives = 134/245 (54%), Gaps = 15/245 (6%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
++ DQ+GCRFLQ E D + +IF V ++L++DPFGNYL+QKL D +Q
Sbjct: 206 MAKDQHGCRFLQWIFEDGSALDAL--VIFSEVIPHVVELMMDPFGNYLMQKLLDVCNEEQ 263
Query: 244 KTAMIKDIYPS---VFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVT 300
+T +I + + +IS+N YGTR +Q+++++++T++ I ++ +
Sbjct: 264 RTQIILMVTSEPGQLIRISLNAYGTRVVQRLVESIKTRKQISLVKSALRPGF------LN 317
Query: 301 LINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQ 360
LI DLNGNHVIQ+C+ + +TH+HGCCVLQK ++ + Q
Sbjct: 318 LIRDLNGNHVIQRCLQCL--STEDNEFIFEDATKFCIDIATHRHGCCVLQKCIAYSSGLQ 375
Query: 361 IFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSS 420
K+ +I + L D +GNY +QF+ +++ DF + +L +LS KFSS
Sbjct: 376 REKLVTEISRNSLFLAQDPYGNYAVQFVLELR--DFSAIAAMLAQLKGHYVELSMQKFSS 433
Query: 421 NVVEK 425
++VE+
Sbjct: 434 HMVER 438
>At1g78160 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 626
Score = 135 bits (339), Expect = 3e-31
Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 15/245 (6%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
++ DQ+GCRFLQR + D + +IF V ++L++DPFGNYL+QKL D T +Q
Sbjct: 341 MAKDQHGCRFLQRIFDEGTSVDAM--IIFNEVIAHVVELMMDPFGNYLMQKLLDVCTEEQ 398
Query: 244 KTAMI---KDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVT 300
+T ++ + + +IS+N YGTR +Q++++T+ + + I ++ +
Sbjct: 399 RTQIVLVATEEPGQLIRISLNAYGTRVVQRLVETIRSGKQISLVKLALRPGF------LD 452
Query: 301 LINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQ 360
LI DLNGNHVIQ+C+ + +TH+HGCCVLQK ++ QQ
Sbjct: 453 LIKDLNGNHVIQRCLQCL--STEDNKFIFDAATKFCTEIATHRHGCCVLQKCIAYSMRQQ 510
Query: 361 IFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSS 420
K+ +I + L D FGNY +QF+ +++ + +L QLS KFSS
Sbjct: 511 REKLIAEISRNSLLLAQDPFGNYAVQFVIELRIPS--AVAMMLAQLKGHYVQLSMQKFSS 568
Query: 421 NVVEK 425
++VE+
Sbjct: 569 HMVER 573
>At1g35730 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 564
Score = 129 bits (324), Expect = 2e-29
Identities = 95/323 (29%), Positives = 153/323 (46%), Gaps = 56/323 (17%)
Query: 184 LSTDQYGCRFLQRKLE--TPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
++ DQ GCR LQ+ +E T E+ + I ++V ++L +DPFGNY++QKL D
Sbjct: 257 MAKDQIGCRVLQKLVEEGTFHEAKVILLAIIDHV----VELSMDPFGNYIVQKLFDVSDE 312
Query: 242 DQKTAMIKDIYPS---VFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQV 298
+Q+T ++ + + + +I +N YGTR +QK+I+TV+T++ I ++ G
Sbjct: 313 EQRTLIVSVLTSNPRELIRICLNTYGTRVVQKMIETVKTKQQIALVKSGLKPGF------ 366
Query: 299 VTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTL 358
+ L+ DLNGNHVIQ C+ P + H+HGCCVLQ +S
Sbjct: 367 LALVKDLNGNHVIQSCLQTLGP--NDNEFVLEAATKYCAEIAIHRHGCCVLQCCISNSVG 424
Query: 359 QQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKF 418
Q ++ +I + L D FGNY++Q+L D + LL + +L+ KF
Sbjct: 425 LQRERLVAEISRNSLHLSQDPFGNYVVQYLIDQQVSAVKLLVQ----FRMHYAELATQKF 480
Query: 419 SSNVVEKYIKKLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGDDVVNASMGILLVIADIF 478
SS+V+EK ++K P R + +V +
Sbjct: 481 SSHVIEKCLRKY----------------------PESRAE-------------IVRELLC 505
Query: 479 MANITSLIRDNYGNYALQTLLDV 501
+ N L++D Y NY +QT L V
Sbjct: 506 VPNFEYLLQDPYANYVIQTALSV 528
>ECU11g1730 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 530
Score = 129 bits (323), Expect = 2e-29
Identities = 82/253 (32%), Positives = 136/253 (53%), Gaps = 18/253 (7%)
Query: 176 LKDLDYVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKL 235
+KD+ V +S DQ G R +QRK+++ ++ F N+ + +L + FGNY+IQK+
Sbjct: 218 MKDI-CVSISKDQEGSRCIQRKMDSISRAEI--SWFFNNIVDAAPELSANLFGNYVIQKI 274
Query: 236 CDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSI 295
LT +++ +I + + +S++ YG R +QK++D + I +R
Sbjct: 275 IPLLTEEERARLIAKLAKQINLLSVHPYGCRVIQKLVDVSSDVDFILEEVR--------- 325
Query: 296 EQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSV 355
+ ++ LI D NGNHVIQKCI K + +THK+GC V+Q++L
Sbjct: 326 DNLLELIEDQNGNHVIQKCIEKCKDRNIILQQFSENSLFL----ATHKYGCRVIQRMLEF 381
Query: 356 CTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSC 415
C +I I +I + +L++DQ+GNY+IQ + + + D L K+ +K +LS
Sbjct: 382 CREDEIKNIVEVLISNIKTLVDDQYGNYVIQHILAVGKEDEKNL--VIEKIIEKSYELSR 439
Query: 416 LKFSSNVVEKYIK 428
KFSSNVVE+ +K
Sbjct: 440 CKFSSNVVEQCVK 452
>At4g08840 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 524
Score = 129 bits (323), Expect = 2e-29
Identities = 97/319 (30%), Positives = 152/319 (47%), Gaps = 52/319 (16%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
++ DQ GCR LQ+ ++ D + +IF+ V N ++L DPFGNYLIQKL + +Q
Sbjct: 249 MAKDQLGCRLLQKFVDEGNFVDVM--IIFKEVINNVIELGTDPFGNYLIQKLIEVCNEEQ 306
Query: 244 KTAMIKDIYPS---VFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVT 300
+T ++ + + +ISIN YGTR +QK+I+TV T+E I ++ + + ++
Sbjct: 307 RTQILIRLTSKPGLLVKISINNYGTRVVQKLIETVTTKEQISLV------KSALVPGFLS 360
Query: 301 LINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQ 360
L +LNGNHVI C+ F P +T +HGCCVLQ+ +S +Q
Sbjct: 361 LFRELNGNHVILNCLKFFSP--NDNKFILEAATKFCIEIATTRHGCCVLQRCVSYSVGEQ 418
Query: 361 IFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSS 420
K+ +I + L D FGNY++Q++ + K +L E L +L+ KF S
Sbjct: 419 HEKLVDEISRNSLLLAQDPFGNYLVQYIIEKKVGGVNVLFE----LRGNYVKLATQKFGS 474
Query: 421 NVVEKYIKKLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGDDVVNASMGILLVIADIFMA 480
+VVEK ++ P R +VN + +L
Sbjct: 475 HVVEKCLR----------------------YYPESR----SQIVNELVSVL--------- 499
Query: 481 NITSLIRDNYGNYALQTLL 499
N L++D Y NY +Q L
Sbjct: 500 NFGYLLQDPYANYVIQCAL 518
>At3g10360 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 1031
Score = 127 bits (319), Expect = 7e-29
Identities = 81/245 (33%), Positives = 133/245 (54%), Gaps = 14/245 (5%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
++ S DQYG RF+Q+KLET +D+ ++ IF + + L+ D FGNY+IQK ++ TT
Sbjct: 670 IEFSMDQYGSRFIQQKLETA--TDEEKNAIFPEILPYGRTLMTDVFGNYVIQKFFEHGTT 727
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
Q+ + + + V +S+ YG R +QK ++ VE ++ M+ V+
Sbjct: 728 KQRKELAEQVTGHVLALSLQMYGCRVIQKALEVVELEQQARMV-------KELDGSVMKC 780
Query: 302 INDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLS-VCTLQQ 360
++D NGNHVIQKCI + STH +GC V+Q++L + ++
Sbjct: 781 VHDQNGNHVIQKCIERL--PQDWIQFIISSFYGKVLALSTHPYGCRVIQRVLEHIDDIET 838
Query: 361 IFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSS 420
I +I+ + +L DQ+GNY+IQ + I+ + E NKL+ ++ ++S KF+S
Sbjct: 839 QRIIMEEIMDSVCTLAQDQYGNYVIQHI--IQHGKPHERSEIINKLAGQIVKMSQQKFAS 896
Query: 421 NVVEK 425
NVVEK
Sbjct: 897 NVVEK 901
Score = 69.7 bits (169), Expect = 2e-11
Identities = 56/209 (26%), Positives = 93/209 (43%), Gaps = 16/209 (7%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
LS YGCR +Q+ LE + Q R + + ++ + + D GN++IQK + L D
Sbjct: 744 LSLQMYGCRVIQKALEVVELEQQAR--MVKELDGSVMKCVHDQNGNHVIQKCIERLPQDW 801
Query: 244 KTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLIN 303
+I Y V +S + YG R +Q+++ EHID I ++ V TL
Sbjct: 802 IQFIISSFYGKVLALSTHPYGCRVIQRVL------EHIDDIETQRIIMEEIMDSVCTLAQ 855
Query: 304 DLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQIFK 363
D GN+VIQ I +P S K V++K L+ ++
Sbjct: 856 DQYGNYVIQHIIQHGKP--HERSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQV 913
Query: 364 ISVKIIQY------LPSLINDQFGNYIIQ 386
+ +++ Y L +++ D FGNY++Q
Sbjct: 914 LVNEMLGYTDENEPLQAMMKDPFGNYVVQ 942
Score = 54.7 bits (130), Expect = 6e-07
Identities = 34/134 (25%), Positives = 71/134 (52%), Gaps = 6/134 (4%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
LST YGCR +QR LE + + R +I E + + L D +GNY+IQ + + +
Sbjct: 816 LSTHPYGCRVIQRVLEHIDDIETQR-IIMEEIMDSVCTLAQDQYGNYVIQHIIQHGKPHE 874
Query: 244 KTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMI--IRGFSQEHTSIEQVVTL 301
++ +I + + ++S ++ + ++K + +E ++ + G++ E+ E + +
Sbjct: 875 RSEIINKLAGQIVKMSQQKFASNVVEKCLTFGGPEERQVLVNEMLGYTDEN---EPLQAM 931
Query: 302 INDLNGNHVIQKCI 315
+ D GN+V+QK +
Sbjct: 932 MKDPFGNYVVQKVL 945
>Hs13491166 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 1186
Score = 126 bits (316), Expect = 2e-28
Identities = 82/263 (31%), Positives = 135/263 (51%), Gaps = 19/263 (7%)
Query: 169 NDLHNIRLKDL--DYVKLSTDQYGCRFLQRKLE--TPQESDQVRDLIFENVNNFFLDLIL 224
N N++L+++ ++ S DQ+G RF+Q KLE TP E R L+F + L++
Sbjct: 839 NRYPNLQLREIAGHIMEFSQDQHGSRFIQLKLERATPAE----RQLVFNEILQAAYQLMV 894
Query: 225 DPFGNYLIQKLCDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMI 284
D FGNY+IQK ++ + +QK A+ + I V +++ YG R +QK ++ + + + +M+
Sbjct: 895 DVFGNYVIQKFFEFGSLEQKLALAERIRGHVLSLALQMYGCRVIQKALEFIPSDQQNEMV 954
Query: 285 IRGFSQEHTSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKH 344
V+ + D NGNHV+QKCI QP STH +
Sbjct: 955 -------RELDGHVLKCVKDQNGNHVVQKCIECVQP--QSLQFIIDAFKGQVFALSTHPY 1005
Query: 345 GCCVLQKLLSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFN 404
GC V+Q++L C Q I ++ Q+ L+ DQ+GNY+IQ + + + +
Sbjct: 1006 GCRVIQRILEHCLPDQTLPILEELHQHTEQLVQDQYGNYVIQHVLEHGRPED--KSKIVA 1063
Query: 405 KLSQKLCQLSCLKFSSNVVEKYI 427
++ + LS KF+SNVVEK +
Sbjct: 1064 EIRGNVLVLSQHKFASNVVEKCV 1086
Score = 63.9 bits (154), Expect = 9e-10
Identities = 51/222 (22%), Positives = 101/222 (44%), Gaps = 24/222 (10%)
Query: 182 VKLSTDQYGCRFLQRKLE---TPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDY 238
+ L+ YGCR +Q+ LE + Q+++ VR+L + L + D GN+++QK +
Sbjct: 926 LSLALQMYGCRVIQKALEFIPSDQQNEMVREL-----DGHVLKCVKDQNGNHVVQKCIEC 980
Query: 239 LTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQV 298
+ +I VF +S + YG R +Q+I++ + + ++ + H EQ
Sbjct: 981 VQPQSLQFIIDAFKGQVFALSTHPYGCRVIQRILEHCLPDQTLPIL----EELHQHTEQ- 1035
Query: 299 VTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCT- 357
L+ D GN+VIQ + +P S HK V++K ++ +
Sbjct: 1036 --LVQDQYGNYVIQHVLEHGRPEDKSKIVAEIRGNVLVL--SQHKFASNVVEKCVTHASR 1091
Query: 358 ------LQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKE 393
+ ++ ++ L +++ DQ+ NY++Q + D+ E
Sbjct: 1092 TERAVLIDEVCTMNDGPHSALYTMMKDQYANYVVQKMIDVAE 1133
Score = 56.6 bits (135), Expect = 2e-07
Identities = 35/137 (25%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
LST YGCR +QR LE + I E ++ L+ D +GNY+IQ + ++ +
Sbjct: 1000 LSTHPYGCRVIQRILEHCLPDQTLP--ILEELHQHTEQLVQDQYGNYVIQHVLEHGRPED 1057
Query: 244 KTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLIN 303
K+ ++ +I +V +S +++ + ++K + E +I + + T++
Sbjct: 1058 KSKIVAEIRGNVLVLSQHKFASNVVEKCVTHASRTERAVLIDEVCTMNDGPHSALYTMMK 1117
Query: 304 DLNGNHVIQKCIFKFQP 320
D N+V+QK I +P
Sbjct: 1118 DQYANYVVQKMIDVAEP 1134
>YLL013c [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 879
Score = 125 bits (314), Expect = 3e-28
Identities = 81/266 (30%), Positives = 140/266 (52%), Gaps = 19/266 (7%)
Query: 169 NDLHNIRLKDL--DYVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDP 226
N N+ LKD+ ++ DQ+G RF+QR+L T S+ +++IF + + ++L D
Sbjct: 529 NSNSNMSLKDIFGHSLEFCKDQHGSRFIQRELATSPASE--KEVIFNEIRDDAIELSNDV 586
Query: 227 FGNYLIQKLCDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIR 286
FGNY+IQK ++ + QK ++ ++ Q+S+ Y R +QK ++ +++ + I++++
Sbjct: 587 FGNYVIQKFFEFGSKIQKNTLVDQFKGNMKQLSLQMYACRVIQKALEYIDSNQRIELVLE 646
Query: 287 GFSQEHTSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGC 346
+ V+ +I D NGNHVIQK I STH +GC
Sbjct: 647 -------LSDSVLQMIKDQNGNHVIQKAIETI--PIEKLPFILSSLTGHIYHLSTHSYGC 697
Query: 347 CVLQKLLSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFL-----FDIKELDFYLLGE 401
V+Q+LL + + I ++ ++P LI DQ+GNY+IQ++ F KE+ + E
Sbjct: 698 RVIQRLLEFGSSEDQESILNELKDFIPYLIQDQYGNYVIQYVLQQDQFTNKEM-VDIKQE 756
Query: 402 TFNKLSQKLCQLSCLKFSSNVVEKYI 427
++ + + S KF+SNVVEK I
Sbjct: 757 IIETVANNVVEYSKHKFASNVVEKSI 782
Score = 63.2 bits (152), Expect = 2e-09
Identities = 58/230 (25%), Positives = 104/230 (45%), Gaps = 30/230 (13%)
Query: 183 KLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTD 242
+LS Y CR +Q+ LE +S+Q +L+ E +++ L +I D GN++IQK + + +
Sbjct: 617 QLSLQMYACRVIQKALEYI-DSNQRIELVLE-LSDSVLQMIKDQNGNHVIQKAIETIPIE 674
Query: 243 QKTAMIKDIYPSVFQISINQYGTRSLQKIID--TVETQEHIDMIIRGFSQEHTSIEQVVT 300
+ ++ + ++ +S + YG R +Q++++ + E QE I ++ F +
Sbjct: 675 KLPFILSSLTGHIYHLSTHSYGCRVIQRLLEFGSSEDQESILNELKDF---------IPY 725
Query: 301 LINDLNGNHVIQKCI----FKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVC 356
LI D GN+VIQ + F + S HK V++K +
Sbjct: 726 LIQDQYGNYVIQYVLQQDQFTNKEMVDIKQEIIETVANNVVEYSKHKFASNVVEKSILYG 785
Query: 357 TLQQIFKISVKIIQY-------------LPSLINDQFGNYIIQFLFDIKE 393
+ Q I KI+ + +I DQF NY+IQ L ++ E
Sbjct: 786 SKNQKDLIISKILPRDKNHALNLEDDSPMILMIKDQFANYVIQKLVNVSE 835
>At2g29190 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 972
Score = 125 bits (314), Expect = 3e-28
Identities = 80/245 (32%), Positives = 130/245 (52%), Gaps = 14/245 (5%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
V+ S+DQYG RF+Q+KLET + +++++E + L L+ D FGNY+IQK ++
Sbjct: 640 VEFSSDQYGSRFIQQKLETATSDE--KNMVYEEIMPHALALMTDVFGNYVIQKFFEHGLP 697
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
Q+ + ++ +V +S+ YG R +QK I+ V+ + I M+ V+
Sbjct: 698 PQRRELADKLFDNVLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-------KELDGHVMRC 750
Query: 302 INDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVC-TLQQ 360
+ D NGNHV+QKCI + P STH +GC V+Q++L C
Sbjct: 751 VRDQNGNHVVQKCI-ECVP-EENIEFIISTFFGNVVTLSTHPYGCRVIQRVLEHCHDPDT 808
Query: 361 IFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSS 420
K+ +I+ + L DQ+GNY+IQ + + + D + +L+ K+ Q+S KF+S
Sbjct: 809 QSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKPDERTV--IIKELAGKIVQMSQQKFAS 866
Query: 421 NVVEK 425
NVVEK
Sbjct: 867 NVVEK 871
Score = 60.5 bits (145), Expect = 1e-08
Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
V LST YGCR +QR LE + D + + + + + L D +GNY+IQ + ++
Sbjct: 784 VTLSTHPYGCRVIQRVLEHCHDPD-TQSKVMDEIMSTISMLAQDQYGNYVIQHVLEHGKP 842
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
D++T +IK++ + Q+S ++ + ++K + T E + ++ E + +
Sbjct: 843 DERTVIIKELAGKIVQMSQQKFASNVVEKCL-TFGGPEEREFLVNEMLGTTDENEPLQAM 901
Query: 302 INDLNGNHVIQKCI 315
+ D N+V+QK +
Sbjct: 902 MKDQFANYVVQKVL 915
>At2g29200 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 968
Score = 124 bits (310), Expect = 8e-28
Identities = 79/245 (32%), Positives = 130/245 (52%), Gaps = 14/245 (5%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
V+ S+DQYG RF+Q+KLET + +++++E + L L+ D FGNY+IQK ++
Sbjct: 636 VEFSSDQYGSRFIQQKLETATTDE--KNMVYEEIMPQALVLMTDVFGNYVIQKFFEHGLP 693
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
Q+ + + ++ V +S+ YG R +QK I+ V+ + I M+ V+
Sbjct: 694 PQRRELAEKLFDHVLPLSLQMYGCRVIQKAIEVVDLDQKIKMV-------KELDGHVMRC 746
Query: 302 INDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVC-TLQQ 360
+ D NGNHV+QKCI + P STH +GC V+Q++L C
Sbjct: 747 VRDQNGNHVVQKCI-ECVP-EENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHDPDT 804
Query: 361 IFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSS 420
K+ +I+ + L DQ+GNY++Q + + + D + +L+ K+ Q+S KF+S
Sbjct: 805 QSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKPDERTV--IIKELAGKIVQMSQQKFAS 862
Query: 421 NVVEK 425
NVVEK
Sbjct: 863 NVVEK 867
Score = 61.2 bits (147), Expect = 6e-09
Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 2/134 (1%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
V LST YGCR +QR LE + D + + E + + L D +GNY++Q + ++
Sbjct: 780 VTLSTHPYGCRVIQRVLEHCHDPD-TQSKVMEEILSTVSMLAQDQYGNYVVQHVLEHGKP 838
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
D++T +IK++ + Q+S ++ + ++K + T E ++++ E + +
Sbjct: 839 DERTVIIKELAGKIVQMSQQKFASNVVEKCL-TFGGPEERELLVNEMLGTTDENEPLQAM 897
Query: 302 INDLNGNHVIQKCI 315
+ D N+V+QK +
Sbjct: 898 MKDQFANYVVQKVL 911
>At2g29140 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 964
Score = 123 bits (308), Expect = 1e-27
Identities = 79/245 (32%), Positives = 130/245 (52%), Gaps = 14/245 (5%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
V+ S+DQYG RF+Q+KLET + +++++E + L L+ D FGNY+IQK ++
Sbjct: 632 VEFSSDQYGSRFIQQKLETATTDE--KNMVYEEIMPKALALMTDVFGNYVIQKFFEHGLP 689
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
Q+ + + + +V +S+ YG R +QK I+ V+ + I M+ V+
Sbjct: 690 PQRRELGEKLIDNVLPLSLQMYGCRVIQKAIEVVDLDQKIQMV-------KELDGHVMRC 742
Query: 302 INDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVC-TLQQ 360
+ D NGNHV+QKCI + P STH +GC V+Q++L C
Sbjct: 743 VRDQNGNHVVQKCI-ECVP-EENIEFIISTFFGHVVTLSTHPYGCRVIQRVLEHCHNPDT 800
Query: 361 IFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSS 420
K+ +I+ + L DQ+GNY++Q + + + D + +L+ K+ Q+S KF+S
Sbjct: 801 QSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKPDERTV--IIKELAGKIVQMSQQKFAS 858
Query: 421 NVVEK 425
NVVEK
Sbjct: 859 NVVEK 863
Score = 60.5 bits (145), Expect = 1e-08
Identities = 35/134 (26%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
V LST YGCR +QR LE D + + E + + L D +GNY++Q + ++
Sbjct: 776 VTLSTHPYGCRVIQRVLEHCHNPD-TQSKVMEEILSTVSMLTQDQYGNYVVQHVLEHGKP 834
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
D++T +IK++ + Q+S ++ + ++K + T E ++++ E + +
Sbjct: 835 DERTVIIKELAGKIVQMSQQKFASNVVEKCL-TFGGPEERELLVNEMLGTTDENEPLQAM 893
Query: 302 INDLNGNHVIQKCI 315
+ D N+V+QK +
Sbjct: 894 MKDQFANYVVQKVL 907
>SPAC1687.22c [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 429
Score = 119 bits (297), Expect = 2e-26
Identities = 95/336 (28%), Positives = 154/336 (45%), Gaps = 48/336 (14%)
Query: 169 NDLHNIRLKDL--DYVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENV-NNFFLDLILD 225
N + L D+ + V STDQ+G RF+Q+KL T E + R+ +F+ + + L L++D
Sbjct: 84 NKQRHFELSDILGNVVLFSTDQHGSRFIQQKLATATEEE--REAVFQEIASTSCLQLMMD 141
Query: 226 PFGNYLIQKLCDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMII 285
FGNY++QK ++ QK ++ I VF +S+ YG R +QK I+ + + + +I
Sbjct: 142 IFGNYVVQKYFEFGNEKQKQILLSQIKGHVFSLSLQMYGCRVVQKAIEYISPEHQVQLI- 200
Query: 286 RGFSQEHTSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHG 345
QE V+ + D NGNHVIQK I S H +G
Sbjct: 201 ----QELDG--HVLDCVCDQNGNHVIQKAIECID--TGHLQFILRALRPQIHVLSAHPYG 252
Query: 346 CCVLQKLLSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDI-KELDFYLLGETFN 404
C V+Q+ + C ++ I +++ ++ L DQ+GNY++Q + E D + F+
Sbjct: 253 CRVIQRAIEHCHSERKLIIE-ELLPHILKLTQDQYGNYVVQHILRTGSESDKKYI---FD 308
Query: 405 KLSQKLCQLSCLKFSSNVVEKYIKKLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGDDVV 464
+ L LSC KF+SNVVE+ I + + D ++
Sbjct: 309 LMIDHLLFLSCHKFASNVVERCISYISDV-------------------------DRRRIL 343
Query: 465 NASMGILLVIADIFMANITSLIRDNYGNYALQTLLD 500
N + I M +++D Y NY +Q LLD
Sbjct: 344 NKIISEKAENCSILML----MMKDKYANYVIQKLLD 375
>At3g20250 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 955
Score = 115 bits (287), Expect = 4e-25
Identities = 76/243 (31%), Positives = 129/243 (52%), Gaps = 14/243 (5%)
Query: 187 DQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQKTA 246
DQ+G RF+Q+KLE SD+ + +F V L+ D FGNY+IQK ++ T Q+
Sbjct: 640 DQHGSRFIQQKLE--HCSDEEKASVFSEVLPQASKLMTDVFGNYVIQKFIEHGTPAQREE 697
Query: 247 MIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLINDLN 306
++K + + +S+ YG R +QK ++ ++ + ++I V+ + D N
Sbjct: 698 LVKQLAGQMVSLSLQMYGCRVIQKALEVIDVDQKTELI-------RELDGNVLKCVRDQN 750
Query: 307 GNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCT-LQQIFKIS 365
GNHVIQKCI + PA STH +GC V+Q++L C+ ++ I
Sbjct: 751 GNHVIQKCI-ESMPA-GRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCII 808
Query: 366 VKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSSNVVEK 425
+I++ +L +DQ+GNY+ Q + + + D + KL+ + Q+S K++SNVVEK
Sbjct: 809 DEILESAFALAHDQYGNYVTQHVLERGKPD--ERRQIIEKLTGNVVQMSQHKYASNVVEK 866
Query: 426 YIK 428
++
Sbjct: 867 CLE 869
Score = 65.1 bits (157), Expect = 4e-10
Identities = 57/218 (26%), Positives = 96/218 (43%), Gaps = 16/218 (7%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
V LS YGCR +Q+ LE + DQ +LI E N L + D GN++IQK + +
Sbjct: 707 VSLSLQMYGCRVIQKALEV-IDVDQKTELIRELDGN-VLKCVRDQNGNHVIQKCIESMPA 764
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
+ +I V +S + YG R +Q+I++ E II +E L
Sbjct: 765 GRIGFVIAAFRGQVATLSTHPYGCRVIQRILEHCSDDEETHCII------DEILESAFAL 818
Query: 302 INDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQI 361
+D GN+V Q + + +P S HK+ V++K L +
Sbjct: 819 AHDQYGNYVTQHVLERGKP--DERRQIIEKLTGNVVQMSQHKYASNVVEKCLEHADSTER 876
Query: 362 FKISVKII------QYLPSLINDQFGNYIIQFLFDIKE 393
+ +I+ +L +++ DQF NY++Q + +I +
Sbjct: 877 EFLIEEIMGKSEEDNHLLAMMKDQFANYVVQKVLEISK 914
>At4g25880 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 849
Score = 114 bits (284), Expect = 8e-25
Identities = 78/245 (31%), Positives = 125/245 (50%), Gaps = 14/245 (5%)
Query: 185 STDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQK 244
S DQ+G RF+Q+KLE + ++ +F + L+ D FGNY+IQK +Y + Q+
Sbjct: 529 SADQHGSRFIQQKLENCKPEEKAA--VFREILPHACKLMTDVFGNYVIQKFFEYGNSTQR 586
Query: 245 TAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLIND 304
+ + + +S+ YG R +QK +D +E + + + ++E QV+ + D
Sbjct: 587 KELADQLMGQIVPLSLQMYGCRVIQKALDVIEPDQRVRL-----ARELDG--QVMRCVRD 639
Query: 305 LNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTL-QQIFK 363
NGNHVIQKCI PA S H +GC V+Q+LL C+ Q
Sbjct: 640 QNGNHVIQKCIENI-PA-DKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRF 697
Query: 364 ISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSSNVV 423
I+ +I++ + L DQ+GNY+ Q + + + KLS + QLS KF+SNV+
Sbjct: 698 ITEEILESVCVLSKDQYGNYVTQHVLEKGTSE--ERERIGRKLSGHIVQLSLHKFASNVI 755
Query: 424 EKYIK 428
EK ++
Sbjct: 756 EKCLE 760
Score = 62.4 bits (150), Expect = 3e-09
Identities = 57/251 (22%), Positives = 102/251 (39%), Gaps = 28/251 (11%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
V LS YGCR +Q+ L+ + +VR + ++ + + D GN++IQK + +
Sbjct: 598 VPLSLQMYGCRVIQKALDVIEPDQRVR--LARELDGQVMRCVRDQNGNHVIQKCIENIPA 655
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTL 301
D+ M+ V +S++ YG R +Q++++ I +E V L
Sbjct: 656 DKVGFMLYAFRGQVSSLSMHPYGCRVIQRLLERCSHDHQCRFITEEI------LESVCVL 709
Query: 302 INDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQI 361
D GN+V Q + K S HK V++K L +
Sbjct: 710 SKDQYGNYVTQHVLEK--GTSEERERIGRKLSGHIVQLSLHKFASNVIEKCLEYGGRVER 767
Query: 362 FKISVKI------IQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSC 415
I +I L ++ DQ+GNY++Q +F+ D Q+L S
Sbjct: 768 DLIIKEIAGPDESYNSLLMMMKDQYGNYVVQKIFETCTAD------------QRLTLFSR 815
Query: 416 LKFSSNVVEKY 426
++ ++ ++KY
Sbjct: 816 VRMHASALKKY 826
>CE05044 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 707
Score = 109 bits (273), Expect = 1e-23
Identities = 75/255 (29%), Positives = 127/255 (49%), Gaps = 30/255 (11%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
++ + DQ+G RF+Q+KLE D+ IF V +L+ D FGNY+IQK ++
Sbjct: 348 IEFAKDQHGSRFIQQKLERASLRDKAA--IFTPVLENAEELMTDVFGNYVIQKFFEFGNN 405
Query: 242 DQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMI--IRGFSQEHTSIEQVV 299
+Q+ ++ I +V ++++ YG R +QK ++ VE + +++ + G QV+
Sbjct: 406 EQRNQLVGTIRGNVMKLALQMYGCRVIQKALEYVEEKYQHEILGEMEG---------QVL 456
Query: 300 TLINDLNGNHVIQKCIFKFQP--AXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCT 357
+ D NGNHVIQK I + +P S H +GC V+Q++L C
Sbjct: 457 KCVKDQNGNHVIQKVIERVEPERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCN 516
Query: 358 LQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNK-------LSQKL 410
+Q + + +L L+ DQ+GNY+IQ + + G +K +S L
Sbjct: 517 EEQKQPVLDALQIHLKQLVLDQYGNYVIQHVIE--------HGSPSDKEQIVQDVISDDL 568
Query: 411 CQLSCLKFSSNVVEK 425
+ + KF+SNV+EK
Sbjct: 569 LKFAQHKFASNVIEK 583
Score = 57.4 bits (137), Expect = 9e-08
Identities = 60/260 (23%), Positives = 110/260 (42%), Gaps = 23/260 (8%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTT 241
+KL+ YGCR +Q+ LE +E Q I + L + D GN++IQK+ + +
Sbjct: 420 MKLALQMYGCRVIQKALEYVEEKYQHE--ILGEMEGQVLKCVKDQNGNHVIQKVIERVEP 477
Query: 242 DQKTAMI----KDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQ 297
++ +I K+ +V+ +S++ YG R +Q++++ ++ ++ Q H
Sbjct: 478 ERLQFIIDAFTKNNSDNVYTLSVHPYGCRVIQRVLEYCNEEQKQPVL--DALQIHLK--- 532
Query: 298 VVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCT 357
L+ D GN+VIQ I P+ HK V++K L+
Sbjct: 533 --QLVLDQYGNYVIQHVIEHGSPSDKEQIVQDVISDDLLKFAQ-HKFASNVIEKCLTFGG 589
Query: 358 LQQIFKISVKII-------QYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKL 410
+ I K+ L ++ D F NY++Q + D+ D + + +
Sbjct: 590 HAERNLIIDKVCGDPNDPSPPLLQMMKDPFANYVVQKMLDV--ADPQHRKKITLTIKPHI 647
Query: 411 CQLSCLKFSSNVVEKYIKKL 430
L F +++ KYI KL
Sbjct: 648 ATLRKYNFGKHILRKYILKL 667
>At1g35750 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 528
Score = 105 bits (262), Expect = 3e-22
Identities = 88/322 (27%), Positives = 144/322 (44%), Gaps = 54/322 (16%)
Query: 184 LSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQ 243
++ DQ GCR LQ+ +E D +IF + + ++L +DP GNY++QKL +Q
Sbjct: 221 MARDQIGCRALQKLVEEGTVLDS--KVIFLEIIDHVVELSMDPLGNYIVQKLLVVSDEEQ 278
Query: 244 KTAMIKDIYP---SVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQ-VV 299
+T ++ + + +I +N GTR +QK+I TV+T++ I ++ +++E +
Sbjct: 279 RTMIVSVLTSKPRELIKICLNTNGTRVIQKMIKTVKTKQQIALV-------KSALEPGFL 331
Query: 300 TLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQ 359
L+ND NG HV+Q C+ P +TH++GC VLQ L
Sbjct: 332 VLVNDSNGYHVLQSCLEFLVP--NDNKFVVEAATEYCAQLATHQYGCYVLQCSLINTVGL 389
Query: 360 QIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFS 419
Q ++ +I + L D FGNY++Q L D + LL +L+ KFS
Sbjct: 390 QHERLVAEISRDSLRLSQDPFGNYVVQCLIDQQVSSVNLL----LPFRTHCIELATQKFS 445
Query: 420 SNVVEKYIKKLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGDDVVNASMGILLVIADIFM 479
S+V+EK ++K P R + +V +
Sbjct: 446 SHVIEKCLRKY----------------------PESRAE-------------IVRELLSY 470
Query: 480 ANITSLIRDNYGNYALQTLLDV 501
N L++D Y NY +QT L V
Sbjct: 471 PNFEQLLQDPYANYVIQTALSV 492
>CE01838 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 393
Score = 99.8 bits (247), Expect = 2e-20
Identities = 70/263 (26%), Positives = 130/263 (48%), Gaps = 15/263 (5%)
Query: 171 LHNIRLKDLD--YVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFG 228
+ N++L D+ +K + DQ G RF+Q++L + ++ + +D IF+ V + +L+ D FG
Sbjct: 45 MKNLKLSDIRGALLKFAKDQVGSRFIQQELASSKDRFE-KDSIFDEVVSNADELVDDIFG 103
Query: 229 NYLIQKLCDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGF 288
NY++QK +Y ++ I V + + Y R LQK ++ + I ++
Sbjct: 104 NYVVQKFFEYGEERHWARLVDAIIDRVPEYAFQMYACRVLQKALEKINEPLQIKIL---- 159
Query: 289 SQEHTSIEQVV-TLINDLNGNHVIQKCIFKFQPA-XXXXXXXXXXXXXXXXXXSTHKHGC 346
+ I V+ + D NGNHV+QK I K P S +GC
Sbjct: 160 ----SQIRHVIHRCMKDQNGNHVVQKAIEKVSPQYVQFIVDTLLESSNTIYEMSVDPYGC 215
Query: 347 CVLQKLLSVCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKELDFYLLGETFNKL 406
V+Q+ L C+ Q + +I + + N+Q+GNY++Q + + + ++ T ++
Sbjct: 216 RVVQRCLEHCSPSQTKPVIGQIHKRFDEIANNQYGNYVVQHVIEHGSEEDRMVIVT--RV 273
Query: 407 SQKLCQLSCLKFSSNVVEKYIKK 429
S L + + K+SSNV+EK +++
Sbjct: 274 SNNLFEFATHKYSSNVIEKCLEQ 296
Score = 52.8 bits (125), Expect = 2e-06
Identities = 47/215 (21%), Positives = 93/215 (42%), Gaps = 27/215 (12%)
Query: 189 YGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQKTAMI 248
Y CR LQ+ LE E Q++ I + + + D GN+++QK + ++ ++
Sbjct: 138 YACRVLQKALEKINEPLQIK--ILSQIRHVIHRCMKDQNGNHVVQKAIEKVSPQYVQFIV 195
Query: 249 KDIYPS---VFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLINDL 305
+ S ++++S++ YG R +Q+ ++ + +I Q H +++ N+
Sbjct: 196 DTLLESSNTIYEMSVDPYGCRVVQRCLEHCSPSQTKPVI----GQIHKRFDEIA---NNQ 248
Query: 306 NGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQIFKI- 364
GN+V+Q I + +THK+ V++K L + I
Sbjct: 249 YGNYVVQHVIE--HGSEEDRMVIVTRVSNNLFEFATHKYSSNVIEKCLEQGAVYHKSMIV 306
Query: 365 ---------SVKIIQYLPSLINDQFGNYIIQFLFD 390
SV I+ ++ DQ+ NY++Q +FD
Sbjct: 307 GAACHHQEGSVPIVV---QMMKDQYANYVVQKMFD 338
>CE27529_2 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 505
Score = 73.6 bits (179), Expect = 1e-12
Identities = 86/378 (22%), Positives = 153/378 (39%), Gaps = 70/378 (18%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNN--FFLDLILDPFGNYLIQKLCDYL 239
V+ +TD+ GCRFLQ T ++D + L + V + FL L + FGN+ +Q++ +
Sbjct: 150 VEFATDKNGCRFLQEHYPTESDNDIHQKLFRKLVEDRAIFLSLCCNMFGNFFVQRVLECS 209
Query: 240 TTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQ--EHIDMIIRGFSQEHTSIEQ 297
T+++ + + + ++ + +++ R +Q I ++ + + +R SI+Q
Sbjct: 210 NTEEQEILTEHLASDLYNLCLDKSACRVIQLAIQKLDVHLATRLSLELRDTYLVRLSIDQ 269
Query: 298 VVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQ---KLLS 354
NGNHVIQK + + K+GC V+Q + LS
Sbjct: 270 --------NGNHVIQKIVKTLPVSAWSFVVEFFADDDNLIHVCQDKYGCRVIQSTVETLS 321
Query: 355 VCTLQQIFKISVKIIQYLPS--------LINDQFGNYIIQFLFDIKE-LDFYLLGETFNK 405
T + ++ V +++ L S L +++F NY++Q + + + Y
Sbjct: 322 SDTYAECYQQRVVLLRSLMSGVTRNCSQLASNEFANYVVQHVIKCGDAMAVYRDVIIEQC 381
Query: 406 LSQKLCQLSCLKFSSNVVEKYIK----KLFAIVMNYVXXXXXXXXXXXXLNPHDRVDDGD 461
L Q L +S K++S+VVE +L A +MN + PH
Sbjct: 382 LLQNLLSMSQEKYASHVVEVAFGCAPCRLAAEMMNEIFEGYI---------PH------P 426
Query: 462 DVVNASMGILLVIADIFMANITSLIRDNYGNYALQTLLDV-------------RNYSAIL 508
D ++ ILL YGNY +Q ++ + Y L
Sbjct: 427 DTNRDALDILLF--------------HQYGNYVVQKMIQICVLGQNARDQKQAEMYGMWL 472
Query: 509 EHPRNNIVYNNPRLASFS 526
E R ++ N RL FS
Sbjct: 473 EKIRERVMRNANRLERFS 490
>CE18393 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 502
Score = 71.6 bits (174), Expect = 5e-12
Identities = 66/277 (23%), Positives = 124/277 (43%), Gaps = 28/277 (10%)
Query: 182 VKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNN--FFLDLILDPFGNYLIQKLCDYL 239
V+ +TD+ GCRFLQ T ++D + L + V + FL L + FGN+ +Q++ +
Sbjct: 147 VEFATDKNGCRFLQEHYPTENDNDVHQKLFRKLVEDRAIFLSLCSNMFGNFFVQRVLECS 206
Query: 240 TTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQ--EHIDMIIRGFSQEHTSIEQ 297
T+++ + + + ++ + +++ R +Q I ++ + + +R SI+Q
Sbjct: 207 NTEEQEILTEHLATDLYNLCLDKSACRVIQLAIQKLDVHLATRLSLELRDTHLVRLSIDQ 266
Query: 298 VVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQ---KLLS 354
NGNHVIQK + + K+GC V+Q + LS
Sbjct: 267 --------NGNHVIQKIVKTLPVSSWTFLVDFFADDDNLIHVCQDKYGCRVIQSTVETLS 318
Query: 355 VCTLQQIFKISVKIIQYL--------PSLINDQFGNYIIQFLFDIKE-LDFYLLGETFNK 405
Q ++ V +++ L L +++F NY++Q + + L Y
Sbjct: 319 TDQYAQCYQHRVILLRSLMAGVTRNCTQLASNEFANYVVQHVIKCGDALAVYRDIIIEQC 378
Query: 406 LSQKLCQLSCLKFSSNVVEKYIK----KLFAIVMNYV 438
L Q L +S K++S+VVE + +L A +MN +
Sbjct: 379 LLQNLLSMSQEKYASHVVEVAFECAPYRLVAEMMNEI 415
>At4g08560_2 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 363
Score = 63.2 bits (152), Expect = 2e-09
Identities = 63/302 (20%), Positives = 129/302 (41%), Gaps = 60/302 (19%)
Query: 209 DLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQKTAMIKDIYPSVFQ---ISINQYGT 265
D IF+N+ + +L+LD +G+ + +KL + T +Q T ++ + F+ + ++ +GT
Sbjct: 67 DKIFDNLISHVCELMLDYYGHKVFRKLMEKCTDEQITRVLDIVLEEPFEFVRLCVHTHGT 126
Query: 266 RSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXX 325
++Q ++ ++ ++E I + T + L D+ + VI C +F P+
Sbjct: 127 HAIQGLMRSLCSEEQISRFM------ETLCYVSLLLTKDVIAHRVILFCFNQFSPS--HT 178
Query: 326 XXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQIFKISVKIIQYLPSLINDQFG---- 381
+ ++GCC+L+KL+ + + + +II L + +G
Sbjct: 179 RYLLEVIVQNCYQVAIDQNGCCMLKKLIRQSSRELRDPLIKEIISIAVRLCGNCYGTLTP 238
Query: 382 ------NYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSSNVVEKYIKKLFAIVM 435
NY++Q+L +K D+ + L QLS K+ S+VV+K ++
Sbjct: 239 KSLLVRNYVVQYLLRLK--DYEVTSALSKHLDGNYVQLSYDKYGSHVVQKCLE------- 289
Query: 436 NYVXXXXXXXXXXXXLNPHDRVDDGDDVVNASMGILLVIADIFMANITSLIRDNYGNYAL 495
+ +IA++ +++I SL+ D YG+Y +
Sbjct: 290 -----------------------------SREFSSRRIIAEL-LSDIDSLLVDPYGDYVI 319
Query: 496 QT 497
QT
Sbjct: 320 QT 321
>CE01916 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 632
Score = 60.5 bits (145), Expect = 1e-08
Identities = 60/272 (22%), Positives = 112/272 (41%), Gaps = 32/272 (11%)
Query: 180 DYVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENV---NNFFLDLILDPFGNYLIQKLC 236
D +K + D+ GC+FL++ ++ S Q + +FE V + FL L + FGNYL+Q +
Sbjct: 193 DLMKFAVDKTGCQFLEKAVKGSLTSYQ-KFQLFEQVIGRKDDFLKLSTNIFGNYLVQSVI 251
Query: 237 -------DYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFS 289
D T ++ + I + + ++++ R +Q + ++ ++
Sbjct: 252 GISLATNDDGYTKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACKLV----- 306
Query: 290 QEHTSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVL 349
Q +++ + D N NHVIQK + + K+GC V+
Sbjct: 307 QALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICSDKYGCRVV 366
Query: 350 QKLLSVCTL----------------QQIFKISVKIIQYLPSLINDQFGNYIIQFLFDIKE 393
Q ++ T + + ++ + L +++ NYIIQ + +
Sbjct: 367 QTIIEKLTADSMNVDLTSAAQNLRERALQRLMTSVTNRCQELATNEYANYIIQHIVSNDD 426
Query: 394 LDFYLLGETFNKLSQKLCQLSCLKFSSNVVEK 425
L Y L + L LS KF+S+VVEK
Sbjct: 427 LAVYRECIIEKCLMRNLLSLSQEKFASHVVEK 458
>CE20960 [J] KOG1488 Translational repressor Pumilio/PUF3 and related
RNA-binding proteins (Puf superfamily)
Length = 614
Score = 60.1 bits (144), Expect = 1e-08
Identities = 61/272 (22%), Positives = 108/272 (39%), Gaps = 32/272 (11%)
Query: 180 DYVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENV---NNFFLDLILDPFGNYLIQKLC 236
D +K + D+ GC+FL++ ++ S Q + +FE V + FL L + FGNY +Q++
Sbjct: 191 DLMKFAVDKTGCQFLEKAVKGSLTSYQ-KFQLFEQVIGRKDDFLKLSTNIFGNYFVQEII 249
Query: 237 DYLTTDQKTAMIKD-------IYPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFS 289
T IK I + + ++++ R +Q + ++ ++
Sbjct: 250 GMSLTTYDDDNIKRQEKLKNFISSQMTDMCLDKFACRVIQSSLQNMDLSLACKLV----- 304
Query: 290 QEHTSIEQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVL 349
Q +++ + D N NHVIQK + K+GC V+
Sbjct: 305 QALPRDARLIAICVDQNANHVIQKVVAVIPLKNWEFIVDFVATPEHLRQICFDKYGCRVV 364
Query: 350 QKLLSVCTLQQI----------------FKISVKIIQYLPSLINDQFGNYIIQFLFDIKE 393
Q ++ T I ++ + L +++ NYIIQ + +
Sbjct: 365 QTIIEKLTADSINVDLTSAAQHLRERALQRLMTSVTNRCQELATNEYANYIIQHIVSNDD 424
Query: 394 LDFYLLGETFNKLSQKLCQLSCLKFSSNVVEK 425
L Y L + L LS KF+S+VVEK
Sbjct: 425 LAVYRECIIEKCLMRNLLSLSQEKFASHVVEK 456
>SPBP35G2.14 [R] KOG4574 RNA-binding protein (contains RRM and Pumilio-like
repeats)
Length = 1060
Score = 56.6 bits (135), Expect = 2e-07
Identities = 32/95 (33%), Positives = 50/95 (51%), Gaps = 6/95 (6%)
Query: 221 DLILDPFGNYLIQKLCDYLTTDQKTAMIKDIYPSVFQISINQYGTRSLQKIIDTVETQEH 280
DL D GN ++QKL DY + K M++ I P + QI I++ GT + QKI+D T+
Sbjct: 775 DLSSDHLGNTVVQKLFDYCSDPVKEMMLERIAPHLAQIGIHKNGTWAAQKIVDVASTEAQ 834
Query: 281 IDMIIRGFSQEHTSIEQVVTLINDLNGNHVIQKCI 315
+ +I + + L D GN+V+Q C+
Sbjct: 835 MRLIAKHLQ------PYIPLLFADQFGNYVVQTCL 863
>SPBC56F2.08c [R] KOG4574 RNA-binding protein (contains RRM and Pumilio-like
repeats)
Length = 661
Score = 55.5 bits (132), Expect = 3e-07
Identities = 36/128 (28%), Positives = 73/128 (56%), Gaps = 7/128 (5%)
Query: 192 RFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQKTAMIKDI 251
R +++ +++ + + ++I ++ + +L D GN ++QK +Y + K AM++ I
Sbjct: 169 REIRKNIDSGFYTQEEIEVIARSMLDDVAELSSDYLGNTVVQKFFEYCSDPIKEAMLERI 228
Query: 252 YPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLINDLNGNHVI 311
P + I I++ GT + QKIID T++ +D+I++ + +T++ L D GN+V
Sbjct: 229 APYLAAIGIHKNGTWAAQKIIDVASTEKQMDLIVKHL-RPYTAL-----LYFDQFGNYVA 282
Query: 312 QKCI-FKF 318
Q C+ FK+
Sbjct: 283 QCCLRFKY 290
>At5g43110 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 546
Score = 53.5 bits (127), Expect = 1e-06
Identities = 49/234 (20%), Positives = 104/234 (43%), Gaps = 17/234 (7%)
Query: 202 QESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLTTDQKTAMIKDIYPSVFQ---I 258
Q + + D I+ + +L++DP+G+ ++Q L +++Q ++ + +FQ I
Sbjct: 224 QGTKETVDAIYNGLIGDICELMVDPYGSDVVQLLMRRCSSEQIVQLVDIVTQQMFQFVNI 283
Query: 259 SINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLINDLN-GNHVIQKCIFK 317
I+ GT ++Q ++ + R Q ++ V T+ L+ NH I +
Sbjct: 284 CIDSLGTNAIQVLLTCINE--------RAKDQIPRIVDVVRTVALQLSKSNHAIFVILAC 335
Query: 318 FQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLS---VCTLQQIFKISVKIIQYLPS 374
F+ + +HGCC+LQ + V L+ ++ ++ I
Sbjct: 336 FRLFPLHCRLLLELIVQNCHQIAIDQHGCCLLQLCFNKDRVPNLEIRQRLIMEAIANALR 395
Query: 375 LINDQFGNYIIQFLFDIKELDFYLLGETFNKLSQKLCQLSCLKFSSNVVEKYIK 428
L + +GNY++Q++ ++ + YL+ +L L+ K+ S+ V+K +K
Sbjct: 396 LCLNCYGNYVVQYIVELN--NRYLIDALVRQLIGNYAHLARNKYGSHAVQKLLK 447
>At5g43090 [J] KOG2049 Translational repressor MPT5/PUF4 and related
RNA-binding proteins (Puf superfamily)
Length = 527
Score = 53.5 bits (127), Expect = 1e-06
Identities = 53/259 (20%), Positives = 114/259 (43%), Gaps = 26/259 (10%)
Query: 181 YVKLSTDQYGCRFLQRKLETPQESDQVRDLIFENVNNFFLDLILDPFGNYLIQKLCDYLT 240
Y ++TD+ + L++ + + + D+IF+ + +L++DPFGN +++ L +
Sbjct: 213 YFSIATDRVWSKELEKTIFVGTK--ETIDMIFDGLIVGICELMVDPFGNDVVKLLIGKCS 270
Query: 241 TDQKTAMIKDIYPSV---FQISINQYGTRSLQKIIDTV--ETQEHIDMIIRGFSQEHTSI 295
++Q ++ + + I N GT ++Q ++ ++ I I+ S
Sbjct: 271 SEQIILIVDVVTRHISKFVNICFNPIGTLAIQVLLTSIHERANNQIPRIMDAIS------ 324
Query: 296 EQVVTLINDLNGNHVIQKCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLS- 354
+ L + N +VI C F + ++GCC+LQ+
Sbjct: 325 SVALQLTRNTNAKYVILACFRMF--TSSQCRRLLEVVSQHCYQIAIDQNGCCLLQQCFDK 382
Query: 355 --VCTLQQIFKISVKIIQYLPSLINDQFGNYIIQFLFDI---KELDFYLLGETFNKLSQK 409
V + ++ ++I++ L + GNY++Q++ ++ E D + NKL +
Sbjct: 383 ERVPNHEIRQRLISEVIEHALKLCLNCHGNYVVQYVVELDNQHETDLLV-----NKLLRN 437
Query: 410 LCQLSCLKFSSNVVEKYIK 428
L+ K+ S+VV+K +K
Sbjct: 438 YAHLARNKYGSHVVQKLLK 456
>YPR042c [R] KOG4574 RNA-binding protein (contains RRM and Pumilio-like
repeats)
Length = 1075
Score = 52.0 bits (123), Expect = 4e-06
Identities = 60/242 (24%), Positives = 94/242 (38%), Gaps = 22/242 (9%)
Query: 196 RKLETPQESDQVRDLIFENVNNFFLD----LILDPFGNYLIQKLCDYLTTDQKTAMIKDI 251
R+L +S+ + + E + LD L D GN +IQKL + + + M++
Sbjct: 554 RELRKQFDSNSLSTIEMEQLAIVMLDQLPELSSDYLGNTVIQKLFENSSNIIRDIMLRKC 613
Query: 252 YPSVFQISINQYGTRSLQKIIDTVETQEHIDMIIRGFSQEHTSIEQVVTLINDLNGNHVI 311
+ + +++ GT QKII T I+++ G S + L ND GN+VI
Sbjct: 614 NKYLTSMGVHKNGTWVCQKIIKMANTPRQINLVTSGVS------DYCTPLFNDQFGNYVI 667
Query: 312 Q---KCIFKFQPAXXXXXXXXXXXXXXXXXXSTHKHGCCVLQKLLSVCTLQQIFKISVKI 368
Q K F + S C +++ C Q+ I+ I
Sbjct: 668 QGILKFGFPWNSFIFESVLSHFWTIVQNRYGSRAVRACLEADSIITQC---QLLTITSLI 724
Query: 369 IQYLPSLINDQFGNYIIQFLFD---IKELDFYLLGETFNKLSQKLCQLSCLKFSSNVVEK 425
I P L D G +I +L D + + L + NK KLC C K S V K
Sbjct: 725 IVLSPYLATDTNGTLLITWLLDTCTLPNKNLILCDKLVNKNLVKLC---CHKLGSLTVLK 781
Query: 426 YI 427
+
Sbjct: 782 IL 783
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,365,775
Number of Sequences: 60738
Number of extensions: 1606635
Number of successful extensions: 5298
Number of sequences better than 1.0e-05: 34
Number of HSP's better than 0.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 4821
Number of HSP's gapped (non-prelim): 172
length of query: 822
length of database: 30,389,216
effective HSP length: 115
effective length of query: 707
effective length of database: 23,404,346
effective search space: 16546872622
effective search space used: 16546872622
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)