ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV3594 good C KOG3954 Energy production and conversion Electron transfer flavoprotein, alpha subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV3594 1244141 1245163 341
(341 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPR004c [C] KOG3954 Electron transfer flavoprotein alpha subunit 366 e-101
SPAC27D7.06 [C] KOG3954 Electron transfer flavoprotein alpha sub... 288 6e-78
Hs4503607 [C] KOG3954 Electron transfer flavoprotein alpha subunit 288 1e-77
7303574 [C] KOG3954 Electron transfer flavoprotein alpha subunit 273 3e-73
At1g50940 [C] KOG3954 Electron transfer flavoprotein alpha subunit 272 6e-73
CE24926 [C] KOG3954 Electron transfer flavoprotein alpha subunit 259 5e-69
>YPR004c [C] KOG3954 Electron transfer flavoprotein alpha subunit
Length = 344
Score = 366 bits (939), Expect = e-101
Identities = 193/326 (59%), Positives = 242/326 (74%), Gaps = 14/326 (4%)
Query: 20 ASTLAFVETSKEGAILPASLNTLYAAGNLGNQIDAVLVGSXXXXXXXXLQK-LDVSSLNK 78
ASTLAF+E+SK+G++ +SL+ L AA L N I AV+ GS L+ S+L K
Sbjct: 23 ASTLAFIESSKDGSVSRSSLSLLAAAQKLSNPITAVITGSKAEKTAEALKSSYSCSNLEK 82
Query: 79 ILVVPEESLDDLLPERVTPVVYDLLQKGDYSHFVVPASSVGKGFLPRVGALLDLQPICDV 138
+++ + LD LPE++TP++ LL+ GDYSHFVV SSVGK LPRVGALLD+QP+C+V
Sbjct: 83 LVIFEDSKLDTCLPEQLTPLLVKLLKGGDYSHFVVSNSSVGKSVLPRVGALLDVQPVCEV 142
Query: 139 TKILDPNTFVRPMYAGNILATVESQQSQKLISIRSSAFPAVGAGS-NSAAIETVNASNTV 197
T I DP TF+RP+YAGNI++T+E Q +KL+ IR+SAFP + GS +S IE
Sbjct: 143 TVIKDPKTFIRPIYAGNIISTIECQAEKKLLIIRASAFPPIAEGSMDSVTIE-------- 194
Query: 198 NGTEIPP----IKWEGANLVKSERPELGSATRIVSGGRGLKNKETFEALVTPLADTLGAA 253
T+IPP + W L KSERPEL SA +V+GGR LK+KETFE L++PLAD L AA
Sbjct: 195 KRTDIPPCDLNVTWVKTILTKSERPELTSAQNVVTGGRALKDKETFEKLLSPLADVLHAA 254
Query: 254 IGATRAAVDSGFCDNSLQIGQTGKIVAPELYIALGVSGAIQHLAGIKDAKTIVAINKDPE 313
IGATRA+VD+G CDNSLQIGQTGK+VAP LYIA+GVSGA+QHLAG+KD+K IVAIN DP+
Sbjct: 255 IGATRASVDNGLCDNSLQIGQTGKVVAPNLYIAIGVSGAVQHLAGMKDSKVIVAINNDPD 314
Query: 314 APIFQVADYGLVGDLNELVPELTEKL 339
APIF VADYGL GDL ++VPELTEKL
Sbjct: 315 APIFNVADYGLQGDLYKIVPELTEKL 340
>SPAC27D7.06 [C] KOG3954 Electron transfer flavoprotein alpha subunit
Length = 341
Score = 288 bits (738), Expect = 6e-78
Identities = 149/311 (47%), Positives = 208/311 (65%), Gaps = 11/311 (3%)
Query: 32 GAILPASLNTLYAAGNLGNQIDAVLVGSXXXXXXXXLQKLDVSSLNKILVVPEESLDDLL 91
G + PASL+ + AA G + ++G + K V+ L K++ V S + +
Sbjct: 39 GNLSPASLSAVEAAKRTGGDVFGFVIGKDSSQISQKVAK-SVNDLKKVIYVENPSYEHNI 97
Query: 92 PERVTPVVYDLLQKGDYSHFVVPASSVGKGFLPRVGALLDLQPICDVTKILDPNTFVRPM 151
P+++ V+++ ++K + SH S+VGKG +PR+ A+ D+ I D+ ++ +TFVRP
Sbjct: 98 PDQIANVLFENVKKNEISHVFSAHSTVGKGVMPRLAAMFDVMQISDIIGVVSADTFVRPT 157
Query: 152 YAGNILATVESQQSQKLISIRSSAFPAVGAGSNSAAIETVNASNTVNGTEIPPI---KWE 208
YAGN+ TV ++ K++++R+SAF A + AA V G + P +W
Sbjct: 158 YAGNVNVTVSTKDPIKIVTVRASAFDAAPSSGEGAA-------TVVEGIDPKPAALQEWV 210
Query: 209 GANLVKSERPELGSATRIVSGGRGLKNKETFEALVTPLADTLGAAIGATRAAVDSGFCDN 268
N++K+ RP+L SA R+V+GGR LK+KETFE ++TPLAD LGAAIGATR AVDSG+ DN
Sbjct: 211 SENIIKNARPDLSSAERVVAGGRPLKDKETFERILTPLADKLGAAIGATRVAVDSGYADN 270
Query: 269 SLQIGQTGKIVAPELYIALGVSGAIQHLAGIKDAKTIVAINKDPEAPIFQVADYGLVGDL 328
SLQIGQTGKI+AP+LYIA+G+ GAIQHLAGIKD+K I AIN+D APIFQ AD G+VGDL
Sbjct: 271 SLQIGQTGKIIAPKLYIAVGIDGAIQHLAGIKDSKVIAAINRDENAPIFQTADVGIVGDL 330
Query: 329 NELVPELTEKL 339
E+VPELTEKL
Sbjct: 331 FEIVPELTEKL 341
>Hs4503607 [C] KOG3954 Electron transfer flavoprotein alpha subunit
Length = 333
Score = 288 bits (736), Expect = 1e-77
Identities = 157/321 (48%), Positives = 216/321 (66%), Gaps = 9/321 (2%)
Query: 21 STLAFVETSKEGAILPASLNTLYAAGNLGNQIDAVLVGSXXXXXXXXLQKLDVSSLNKIL 80
STL E + + ++ P +LNT+ AA LG ++ ++ G+ L K V+ + K+L
Sbjct: 21 STLVIAEHAND-SLAPITLNTITAATRLGGEVSCLVAGTKCDKVAQDLCK--VAGIAKVL 77
Query: 81 VVPEESLDDLLPERVTPVVYDLLQKGDYSHFVVPASSVGKGFLPRVGALLDLQPICDVTK 140
V + LLPE +TP++ ++ +Y+H AS+ GK LPRV A L++ PI D+
Sbjct: 78 VAQHDVYKGLLPEELTPLILATQKQFNYTHICAGASAFGKNLLPRVAAKLEVAPISDIIA 137
Query: 141 ILDPNTFVRPMYAGNILATVESQQSQKLISIRSSAFPAVGAGSNSAAIETVNASNTVNGT 200
I P+TFVR +YAGN L TV+ + K+ S+R ++F A SA+ E ++++ V +
Sbjct: 138 IKSPDTFVRTIYAGNALCTVKCDEKVKVFSVRGTSFDAAATSGGSASSEKASSTSPVEIS 197
Query: 201 EIPPIKWEGANLVKSERPELGSATRIVSGGRGLKNKETFEALVTPLADTLGAAIGATRAA 260
E W L KS+RPEL A +VSGGRGLK+ E F+ L+ LAD L AA+GA+RAA
Sbjct: 198 E-----WLDQKLTKSDRPELTGAKVVVSGGRGLKSGENFK-LLYDLADQLHAAVGASRAA 251
Query: 261 VDSGFCDNSLQIGQTGKIVAPELYIALGVSGAIQHLAGIKDAKTIVAINKDPEAPIFQVA 320
VD+GF N +Q+GQTGKIVAPELYIA+G+SGAIQHLAG+KD+KTIVAINKDPEAPIFQVA
Sbjct: 252 VDAGFVPNDMQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVA 311
Query: 321 DYGLVGDLNELVPELTEKLKQ 341
DYG+V DL ++VPE+TE LK+
Sbjct: 312 DYGIVADLFKVVPEMTEILKK 332
>7303574 [C] KOG3954 Electron transfer flavoprotein alpha subunit
Length = 330
Score = 273 bits (697), Expect = 3e-73
Identities = 151/319 (47%), Positives = 206/319 (64%), Gaps = 8/319 (2%)
Query: 21 STLAFVETSKEGAILPASLNTLYAAGNLGNQIDAVLVGSXXXXXXXXLQKLDVSSLNKIL 80
STL E + E + P +LNT+ AA +G + ++ G+ L K+D + K+L
Sbjct: 20 STLVVAEHNNE-VLNPITLNTISAAKKIGGDVTVLVAGTKCGPASEALSKVD--GVTKVL 76
Query: 81 VVPEESLDDLLPERVTPVVYDLLQKGDYSHFVVPASSVGKGFLPRVGALLDLQPICDVTK 140
V + + E +TP+V + ++H + AS+ GK LPRV A LD+ PI ++
Sbjct: 77 VAENAAFNGFTAESLTPLVLAAQSQFKFTHILAGASAFGKNVLPRVAAKLDVSPISEIID 136
Query: 141 ILDPNTFVRPMYAGNILATVESQQSQKLISIRSSAFPAVGAGSNSAAIETVNASNTVNGT 200
+ +TFVR +YAGN + T++S+ + K+I++RS+ FP S A+E A + +
Sbjct: 137 VKSDDTFVRTIYAGNAILTLKSKDAVKVITVRSTNFPPAATSGGSGAVEQAPAGDFASSL 196
Query: 201 EIPPIKWEGANLVKSERPELGSATRIVSGGRGLKNKETFEALVTPLADTLGAAIGATRAA 260
++ L KS+RPEL A IVSGGRGLK+ + F+ L+ LAD GAA+GA+RAA
Sbjct: 197 S----EFVSQELTKSDRPELAGAKVIVSGGRGLKSGDNFK-LLYDLADKFGAAVGASRAA 251
Query: 261 VDSGFCDNSLQIGQTGKIVAPELYIALGVSGAIQHLAGIKDAKTIVAINKDPEAPIFQVA 320
VD+GF N LQIGQTGKIVAPELYIA+G+SGAIQHLAG+KD+KTIVAINKDPEAPIFQVA
Sbjct: 252 VDAGFVPNDLQIGQTGKIVAPELYIAVGISGAIQHLAGMKDSKTIVAINKDPEAPIFQVA 311
Query: 321 DYGLVGDLNELVPELTEKL 339
D G+V DL + VPELT KL
Sbjct: 312 DIGIVADLFKAVPELTGKL 330
>At1g50940 [C] KOG3954 Electron transfer flavoprotein alpha subunit
Length = 363
Score = 272 bits (695), Expect = 6e-73
Identities = 156/329 (47%), Positives = 216/329 (65%), Gaps = 11/329 (3%)
Query: 21 STLAFVETSKEGAILPASLNTLYAAGNLG--NQIDAVLVGSXXXXXXXXLQKLDVS-SLN 77
STL E + G I P +++T+ AA +LG + I +L GS Q S++
Sbjct: 36 STLILAE-HESGTIKPQTVSTVVAANSLGESSSISLLLAGSGSSLQEAASQAASCHPSVS 94
Query: 78 KILVVPEESLDDLLPERVTPVVYDLLQKGDYSHFVVPASSVGKGFLPRVGALLDLQPICD 137
++LV + + L E +V + Q+GDYSH + +SS GK LPRV ALLD+ PI D
Sbjct: 95 EVLVADSDKFEYSLAEPWAKLVDFVRQQGDYSHILASSSSFGKNILPRVAALLDVSPITD 154
Query: 138 VTKILDPNTFVRPMYAGNILATVE-SQQSQKLISIRSSAFPAVGAGSNS----AAIETVN 192
V KIL + F+RP+YAGN L TV + +++IRS++FP +NS A + ++
Sbjct: 155 VVKILGSDQFIRPIYAGNALCTVRYTGAGPCMLTIRSTSFPVTPITANSESKKATVSQID 214
Query: 193 ASNTVNGTEIPPIKWEGANLVKSERPELGSATRIVSGGRGLKNKETFEALVTPLADTLGA 252
SN + + + ++ G + +ERP+LGSA +++GGR LK+ E F+ ++ LA+ LG
Sbjct: 215 LSNFEDDS-VSKSRYVGRSTQDTERPDLGSARVVITGGRALKSVENFK-MIEKLAEKLGG 272
Query: 253 AIGATRAAVDSGFCDNSLQIGQTGKIVAPELYIALGVSGAIQHLAGIKDAKTIVAINKDP 312
A+GATRAAVD+G+ N LQ+GQTGKIVAPELY+A GVSGAIQHLAGIKD+K IVA+NKD
Sbjct: 273 AVGATRAAVDAGYVPNDLQVGQTGKIVAPELYMAFGVSGAIQHLAGIKDSKVIVAVNKDA 332
Query: 313 EAPIFQVADYGLVGDLNELVPELTEKLKQ 341
+APIFQVADYGLVGDL E++PEL EKL +
Sbjct: 333 DAPIFQVADYGLVGDLFEVIPELLEKLPE 361
>CE24926 [C] KOG3954 Electron transfer flavoprotein alpha subunit
Length = 332
Score = 259 bits (661), Expect = 5e-69
Identities = 147/319 (46%), Positives = 209/319 (65%), Gaps = 9/319 (2%)
Query: 21 STLAFVETSKEGAILPASLNTLYAAGNLGNQIDAVLVGSXXXXXXXXLQKLDVSSLNKIL 80
STL E E + P +LN + AA LGN++ ++ G+ + K V+ + ++L
Sbjct: 22 STLVVAEHD-ETKLAPITLNAITAASKLGNEVSVLVTGANATKVAEQVAK--VNGVKRVL 78
Query: 81 VVPEESLDDLLPERVTPVVYDLLQKGDYSHFVVPASSVGKGFLPRVGALLDLQPICDVTK 140
V +E L + LPERV PV+ ++ +++ +S+ G+G +PRV A LD+ I DVT+
Sbjct: 79 VAQDEKLKNNLPERVAPVILASQKQFNFTAITAGSSAFGRGVIPRVAAKLDVSSISDVTE 138
Query: 141 ILDPNTFVRPMYAGNILATVESQQSQKLISIRSSAFPAVGAGSNSAAIETVNASNTVNGT 200
+ ++F R +YAGN + V+S KL++ R ++F G S A+E NA + T
Sbjct: 139 VHSADSFTRTLYAGNAVKKVKSTAPIKLLTFRGTSFEPAKEGG-SGAVE--NAPSADIKT 195
Query: 201 EIPPIKWEGANLVKSERPELGSATRIVSGGRGLKNKETFEALVTPLADTLGAAIGATRAA 260
++ ++ G L KSERP+L +A +VSGGRGLK+ + F+ L+ LAD LGA +GA+RAA
Sbjct: 196 DLS--EFLGQELSKSERPDLATAKVVVSGGRGLKSGDNFK-LIYDLADKLGAGVGASRAA 252
Query: 261 VDSGFCDNSLQIGQTGKIVAPELYIALGVSGAIQHLAGIKDAKTIVAINKDPEAPIFQVA 320
VD+G+ N +Q+GQTGKIVAPELYIA+G+SGAIQHLAG+KD+K IVAINKDP+APIFQVA
Sbjct: 253 VDAGYVPNDMQVGQTGKIVAPELYIAIGISGAIQHLAGMKDSKVIVAINKDPDAPIFQVA 312
Query: 321 DYGLVGDLNELVPELTEKL 339
D GL DL + VPELT L
Sbjct: 313 DIGLKADLFKAVPELTAAL 331
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.133 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,452,137
Number of Sequences: 60738
Number of extensions: 698204
Number of successful extensions: 1229
Number of sequences better than 1.0e-05: 6
Number of HSP's better than 0.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1210
Number of HSP's gapped (non-prelim): 7
length of query: 341
length of database: 30,389,216
effective HSP length: 107
effective length of query: 234
effective length of database: 23,890,250
effective search space: 5590318500
effective search space used: 5590318500
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)