ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV3622    suspect: LH   S     KOG4102  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV3622 1253498  1253962 155  
         (155 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YFR003c [S] KOG4102 Uncharacterized conserved protein                  92   4e-19
SPAC6B12.13 [S] KOG4102 Uncharacterized conserved protein              49   4e-06

>YFR003c [S] KOG4102 Uncharacterized conserved protein
          Length = 155

 Score = 91.7 bits (226), Expect = 4e-19
 Identities = 52/142 (36%), Positives = 64/142 (44%), Gaps = 6/142 (4%)

Query: 11  GTHTVTVTEVPQLLQLRAGQNEXXXXXXXXXXXXVRWDEKVIDNENMNKKKTKICCIFHP 70
           G+ TV+V EVP +LQLRA Q+             VRW+E VIDNENMNKKKTKICCIFHP
Sbjct: 17  GSRTVSVEEVPAVLQLRATQDPPRSQEAMPTRHNVRWEENVIDNENMNKKKTKICCIFHP 76

Query: 71  NTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDEGKSFDXXXXXXXXXXXXXXXXXX 130
                                            + ++   F+                  
Sbjct: 77  QN------EDEEECNHHSDDDGSSSSGSSSSESENEKDLDFNERRQRRLERRHRKLEKKR 130

Query: 131 PPSPNAYEVQPDYSAYRDKNRK 152
             SPNAYE+QPDYS YR K ++
Sbjct: 131 SYSPNAYEIQPDYSEYRRKQQE 152


>SPAC6B12.13 [S] KOG4102 Uncharacterized conserved protein
          Length = 104

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 14 TVTVTEVPQLLQLRAGQNEXXXXXXXXXXXXVRWDEKVIDNENMNKKKTKICCIFH 69
          TVT+    +   +   ++E            VRW    +DNE+MNKKK+K+CCIFH
Sbjct: 15 TVTIESTEESASISHEESENVLHLQPEPVRRVRWTVSTVDNEHMNKKKSKVCCIFH 70


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.309    0.130    0.387 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,917,587
Number of Sequences: 60738
Number of extensions: 164353
Number of successful extensions: 184
Number of sequences better than 1.0e-05: 2
Number of HSP's better than  0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 181
Number of HSP's gapped (non-prelim): 3
length of query: 155
length of database: 30,389,216
effective HSP length: 97
effective length of query: 58
effective length of database: 24,497,630
effective search space: 1420862540
effective search space used: 1420862540
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)