ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV3639    suspect: Pn   S     KOG4415  Function unknown                                               Uncharacterized conserved protein

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV3639 1263242 1262622 -207 
         (207 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

7292701_2 [S] KOG4415 Uncharacterized conserved protein                52   4e-07
Hs5174525 [Z] KOG3592 Microtubule-associated proteins                  51   1e-06
Hs14165456 [Z] KOG3592 Microtubule-associated proteins                 51   1e-06

>7292701_2 [S] KOG4415 Uncharacterized conserved protein
          Length = 1643

 Score = 52.4 bits (124), Expect = 4e-07
 Identities = 38/207 (18%), Positives = 99/207 (47%), Gaps = 7/207 (3%)

Query: 4    KQSKTAKRSKKQNGTREVRSEVFEDSIAKNQMANVPKMTEKSDTKKPTKLQVKKDNFKAR 63
            K+ K  ++ +++    + R E  ++   + ++       ++ + K   KL+ +K   K +
Sbjct: 797  KEEKLKEKEREERMKEKEREEKAKEKQREEKLREEKIKEKEREEKLKEKLREEKIKEKEK 856

Query: 64   LYGSQKKKERRYTEKELNIPTLNRAIVPGVXXXXXXXXXXXXXDHDLIALNRLIKTIGDK 123
                +K++E +  EKE       +  V  +             +  L     L+K   +K
Sbjct: 857  EEKLRKEREEKMREKEREEKIKEKERVEKIKEKEREEKLKKEKEEKLKEKEELLKK-KEK 915

Query: 124  NDEITESKLEKTRRLEEIRDLKRQEMERKETEKKEQLEGKKDEIKKKA------SVARTI 177
             ++  E KL++  R E++++ +R+E  ++ETE++++ + +++++K+K        + + +
Sbjct: 916  EEKEREEKLKEKERQEKLKEKEREEKLKRETEERQREKEREEKLKEKERAEKLKDLEKEV 975

Query: 178  RRKTKRQELKQETLAAQSEPIKKKKSV 204
            + K K ++LK++    + +  K+K  V
Sbjct: 976  KLKEKEEQLKEKEKELKLKEKKEKDKV 1002


>Hs5174525 [Z] KOG3592 Microtubule-associated proteins
          Length = 2468

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 41/199 (20%), Positives = 88/199 (43%), Gaps = 4/199 (2%)

Query: 4   KQSKTAKRSKKQNGTREVRSEVFEDSIAKNQMANVPKMTEKSDTKKPTKLQVKKDNFKAR 63
           KQ+K  +R+  +   +     +   S+ K      P++T+ +  +KP K++ K+     +
Sbjct: 531 KQTKLKQRADSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKK 590

Query: 64  LYGSQKKKERRYTEKELNIPTLNRAIVPGVXXXXXXXXXXXXXDHDLIALNRLIKTIGDK 123
               + + +   TEKE+        +   V                 +     +K   DK
Sbjct: 591 DKPVKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKP-EDK 649

Query: 124 NDEITESKLEKTRRLEEIRDLKRQEMERKETEKKEQLEGKKDEIKKKASVARTIRRKTKR 183
            +E  + K E  ++ E+   +K++E  +KE  KKE  +  K E KK+    + ++++T  
Sbjct: 650 KEEKEKPKKEVAKK-EDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPK--KEVKKETPP 706

Query: 184 QELKQETLAAQSEPIKKKK 202
           +E+K+E    + + +KK++
Sbjct: 707 KEVKKEVKKEEKKEVKKEE 725


>Hs14165456 [Z] KOG3592 Microtubule-associated proteins
          Length = 2342

 Score = 50.8 bits (120), Expect = 1e-06
 Identities = 41/199 (20%), Positives = 88/199 (43%), Gaps = 4/199 (2%)

Query: 4   KQSKTAKRSKKQNGTREVRSEVFEDSIAKNQMANVPKMTEKSDTKKPTKLQVKKDNFKAR 63
           KQ+K  +R+  +   +     +   S+ K      P++T+ +  +KP K++ K+     +
Sbjct: 405 KQTKLKQRADSRESLKPAAKPLPSKSVRKESKEETPEVTKVNHVEKPPKVESKEKVMVKK 464

Query: 64  LYGSQKKKERRYTEKELNIPTLNRAIVPGVXXXXXXXXXXXXXDHDLIALNRLIKTIGDK 123
               + + +   TEKE+        +   V                 +     +K   DK
Sbjct: 465 DKPVKTETKPSVTEKEVPSKEEPSPVKAEVAEKQATDVKPKAAKEKTVKKETKVKP-EDK 523

Query: 124 NDEITESKLEKTRRLEEIRDLKRQEMERKETEKKEQLEGKKDEIKKKASVARTIRRKTKR 183
            +E  + K E  ++ E+   +K++E  +KE  KKE  +  K E KK+    + ++++T  
Sbjct: 524 KEEKEKPKKEVAKK-EDKTPIKKEEKPKKEEVKKEVKKEIKKEEKKEPK--KEVKKETPP 580

Query: 184 QELKQETLAAQSEPIKKKK 202
           +E+K+E    + + +KK++
Sbjct: 581 KEVKKEVKKEEKKEVKKEE 599


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.306    0.124    0.311 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,529,833
Number of Sequences: 60738
Number of extensions: 428728
Number of successful extensions: 6659
Number of sequences better than 1.0e-05: 3
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 6581
Number of HSP's gapped (non-prelim): 35
length of query: 207
length of database: 30,389,216
effective HSP length: 101
effective length of query: 106
effective length of database: 24,254,678
effective search space: 2570995868
effective search space used: 2570995868
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)