ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV3723 suspect: Pn PT KOG3599 Inorganic ion transport and metabolism Ca2+-modulated nonselective cation channel polycystin
r_klactV3723 suspect: Pn PT KOG3599 Signal transduction mechanisms Ca2+-modulated nonselective cation channel polycystin
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV3723 1294591 1290920 -1224
(1224 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
CE25697 [PT] KOG3599 Ca2+-modulated nonselective cation channel ... 56 4e-07
CE05302 [TV] KOG4297 C-type lectin 54 1e-06
YHL028w [GO] KOG4157 beta-16-N-acetylglucosaminyltransferase con... 53 3e-06
YNL283c [GO] KOG4157 beta-16-N-acetylglucosaminyltransferase con... 52 6e-06
>CE25697 [PT] KOG3599 Ca2+-modulated nonselective cation channel polycystin
Length = 3178
Score = 55.8 bits (133), Expect = 4e-07
Identities = 41/144 (28%), Positives = 74/144 (50%), Gaps = 4/144 (2%)
Query: 309 TETGSDGIPTVKTIYTVETPEVQTATTVYTGWTGEYTSTF-ATDLTTVTGSDGI--PTIT 365
T T + T+ T T E P T TT T + T+T T LTT T S P+ +
Sbjct: 388 TTTSTTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTS 447
Query: 366 TIYSVKTTAEPESTYSSGFDSSTT-SKVTISDNTSIEPTYSLSTVSTSHNDSQSQSVTVT 424
T+ + +T+ ST +S SSTT + T +++TS P+ +++T +T+ + S + + +
Sbjct: 448 TVTTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSS 507
Query: 425 TDDSESGSATATGTDNGNESGTGS 448
+ S + S++ + T + +S T +
Sbjct: 508 STPSSTASSSVSSTASSTQSSTST 531
Score = 52.0 bits (123), Expect = 6e-06
Identities = 42/146 (28%), Positives = 64/146 (43%), Gaps = 5/146 (3%)
Query: 305 TGTVTETGSDGIPTVKTIYTVETPEVQTATTVYTGWTGEYTSTFATDLTTVTGSDGIPTI 364
T TVT S T T T+E+ +T T + TST +T+T S T+
Sbjct: 300 TSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSS--TSTTQQSSSTITSSPSSTTL 357
Query: 365 TTIYSVKTTAEPESTYSSGFDSSTTSKVTISDNTSIEPTYSLSTVSTSHNDSQSQSVTVT 424
+T TT E ST SS D++ S + D T+ T++ + ++++ + S S T T
Sbjct: 358 STSIPTTTTPEITSTLSSLPDNAICSYL---DETTTSTTFTTTMLTSTTTEEPSTSTTTT 414
Query: 425 TDDSESGSATATGTDNGNESGTGSAS 450
S S + T T + T S S
Sbjct: 415 EVTSTSSTVTTTEPTTTLTTSTASTS 440
>CE05302 [TV] KOG4297 C-type lectin
Length = 708
Score = 54.3 bits (129), Expect = 1e-06
Identities = 41/139 (29%), Positives = 58/139 (41%), Gaps = 5/139 (3%)
Query: 305 TGTVTETGSDGIPTVKTIYTV-----ETPEVQTATTVYTGWTGEYTSTFATDLTTVTGSD 359
T T T T + IP T+ T E P T+TT T T T+T T TT T S
Sbjct: 226 TSTSTSTTTTTIPITSTVTTTVTTTSEPPTTVTSTTSTTESTSTVTTTIPTTTTTTTVST 285
Query: 360 GIPTITTIYSVKTTAEPESTYSSGFDSSTTSKVTISDNTSIEPTYSLSTVSTSHNDSQSQ 419
+PT T +T+ +P T STT+ T T++ T S +T +T + +
Sbjct: 286 TVPTTKTTTETETSIKPTETTVIITTPSTTTVTTTVPTTTVTSTSSETTTTTRTTVTSTP 345
Query: 420 SVTVTTDDSESGSATATGT 438
+ T + S T T
Sbjct: 346 ATTPSIAASTKAPTTQKST 364
>YHL028w [GO] KOG4157 beta-16-N-acetylglucosaminyltransferase contains WSC
domain
Length = 605
Score = 53.1 bits (126), Expect = 3e-06
Identities = 44/149 (29%), Positives = 72/149 (47%), Gaps = 7/149 (4%)
Query: 303 IGTGTVTETGSDGIPTVKTIYTVETPEVQTATTVYTGWTGEYTSTFATDLTTVTGSDGIP 362
+ + ++T + S I TI T T+TT T T ++T +TD+T+ +
Sbjct: 131 VSSSSITSSSSTSIVDTTTISPTLT---STSTTPLT--TASTSTTPSTDITSALPTTTST 185
Query: 363 TITTIYSVKTTAEPESTYSSGFDSSTTSKVTISDNTSIEPTYSLSTVSTSHNDSQSQSVT 422
++T TT+ +T S+ +STT VT S +T+ T S + +STS + S S + T
Sbjct: 186 KLSTSIPTSTTSSTSTTTSTSSSTSTTVSVTSSTSTTTSTT-SSTLISTSTSSSSSSTPT 244
Query: 423 VTTDDSESGSAT-ATGTDNGNESGTGSAS 450
T+ S S T +T T S T S++
Sbjct: 245 TTSSAPISTSTTSSTSTSTSTTSPTSSSA 273
>YNL283c [GO] KOG4157 beta-16-N-acetylglucosaminyltransferase contains WSC
domain
Length = 503
Score = 52.0 bits (123), Expect = 6e-06
Identities = 34/136 (25%), Positives = 64/136 (47%)
Query: 301 NSIGTGTVTETGSDGIPTVKTIYTVETPEVQTATTVYTGWTGEYTSTFATDLTTVTGSDG 360
+S T T T + S + KT ++T +++ ++ + TST + T T S
Sbjct: 127 SSTATSTSTTSSSSTSVSSKTSTKLDTKTSTSSSATHSSSSSSTTSTTTSSSETTTSSSS 186
Query: 361 IPTITTIYSVKTTAEPESTYSSGFDSSTTSKVTISDNTSIEPTYSLSTVSTSHNDSQSQS 420
+ ++ + TT+ ST S+ STTS T + ++S + ++ ST+ S + +
Sbjct: 187 SSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSSTTSTSSSTST 246
Query: 421 VTVTTDDSESGSATAT 436
TVT+ S + T+T
Sbjct: 247 ATVTSTPSSTSIGTST 262
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.308 0.126 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,056,156
Number of Sequences: 60738
Number of extensions: 1206029
Number of successful extensions: 5137
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4963
Number of HSP's gapped (non-prelim): 97
length of query: 1224
length of database: 30,389,216
effective HSP length: 118
effective length of query: 1106
effective length of database: 23,222,132
effective search space: 25683677992
effective search space used: 25683677992
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)