ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV3819 good J KOG2726 Translation, ribosomal structure and biogenesis Mitochondrial polypeptide chain release factor
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV3819 1324910 1326097 396
(396 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGL143c [J] KOG2726 Mitochondrial polypeptide chain release factor 475 e-134
SPAC2F7.17 [J] KOG2726 Mitochondrial polypeptide chain release f... 262 7e-70
At2g47020 [J] KOG2726 Mitochondrial polypeptide chain release fa... 218 1e-56
Hs19923495 [J] KOG2726 Mitochondrial polypeptide chain release f... 207 3e-53
7298021 [J] KOG2726 Mitochondrial polypeptide chain release factor 189 8e-48
Hs4758744 [J] KOG2726 Mitochondrial polypeptide chain release fa... 173 4e-43
CE17273 [J] KOG2726 Mitochondrial polypeptide chain release factor 169 7e-42
At3g62910 [J] KOG2726 Mitochondrial polypeptide chain release fa... 166 6e-41
At1g56350 [J] KOG2726 Mitochondrial polypeptide chain release fa... 120 3e-27
At5g36170 [J] KOG2726 Mitochondrial polypeptide chain release fa... 120 4e-27
At1g33330 [J] KOG2726 Mitochondrial polypeptide chain release fa... 62 2e-09
Hs18569458 [J] KOG2726 Mitochondrial polypeptide chain release f... 59 1e-08
>YGL143c [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 413
Score = 475 bits (1223), Expect = e-134
Identities = 233/373 (62%), Positives = 292/373 (77%), Gaps = 2/373 (0%)
Query: 22 NSSEAVEFRPLHSSLISRAELYVNELRELEDLLSQGGSFDLEKQKNFAKLSTIVDSYSKY 81
N S ++ L L+ +AE Y EL++L+ LS G FD+ KQK++AKLS + D++ +Y
Sbjct: 39 NGSIPTQYTELSPLLVKQAEKYEAELKDLDKDLSCGIHFDVNKQKHYAKLSALTDTFIEY 98
Query: 82 REEVNQYKELQEILELDPSLREEAEADIAALLPDLNKTGDSLLNKLLPPHPFADKPSILE 141
+E++N+ K LQE++ DPSLR EAE + A L+P T L+NKLLPPHPFADKPS+LE
Sbjct: 99 KEKLNELKSLQEMIVSDPSLRAEAEQEYAELVPQYETTSSRLVNKLLPPHPFADKPSLLE 158
Query: 142 LRPGVGGSEAMIFTQDLLNMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGSYD 201
LRPGVGG EAMIFTQ+LL+MYI YANY KWK+ +ISK EN SGSG+++AIL+I+E GSYD
Sbjct: 159 LRPGVGGIEAMIFTQNLLDMYIGYANYRKWKYRIISKNENESGSGIIDAILSIEEAGSYD 218
Query: 202 KLKFEAGVHRVQRVPATESKGRTHTSTAAVIVLPKMGEESES--DAYERTFKPDEIRIDV 259
+L+FEAGVHRVQR+P+TE+KGRTHTSTAAV+VLP++G+ES DAYERTFKP EIR+D+
Sbjct: 219 RLRFEAGVHRVQRIPSTETKGRTHTSTAAVVVLPQIGDESAKSIDAYERTFKPGEIRVDI 278
Query: 260 MRASGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHRNKAKAFAIXXXXXXXXXXXXX 319
MRASGKGGQHVNTTDSAVRLTH PSGIV+SMQ+ERSQH+NKAKAF I
Sbjct: 279 MRASGKGGQHVNTTDSAVRLTHIPSGIVVSMQDERSQHKNKAKAFTILRARLAEKERLEK 338
Query: 320 XXXXXXXXXDQVSTTDRSDKIRTYNYPQNRITDHRCGFTLYDIEGVMKGERLDDVIDAMD 379
QVS+T+RSDKIRTYN+PQNRITDHRCGFTL D+ GV+ GERLD+VI+AM
Sbjct: 339 EEKERKARKSQVSSTNRSDKIRTYNFPQNRITDHRCGFTLLDLPGVLSGERLDEVIEAMS 398
Query: 380 AFSSEQKAKQLLQ 392
+ S ++AK+LL+
Sbjct: 399 KYDSTERAKELLE 411
>SPAC2F7.17 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 396
Score = 262 bits (669), Expect = 7e-70
Identities = 136/328 (41%), Positives = 202/328 (61%), Gaps = 7/328 (2%)
Query: 61 DLEKQKNFAKLSTIVDSYSKYREEVNQYKELQ--EILELDPSLREEAEADIAALLPDLNK 118
D + K A+L + ++YSK++ Q +L+ E E D ++ A +I + + K
Sbjct: 65 DTDLAKRIARLRRVHNAYSKFKSLSEQISDLKQMEAQESDAEVKMMAVTEINEISNKIPK 124
Query: 119 TGDSLLNKLLPPHPFADKPSILELRPGVGGSEAMIFTQDLLNMYINYANYHKWKWNLISK 178
+ + L N LLP P+++E+RPGVGG+EA IF +L+ MY YAN+ W ISK
Sbjct: 125 SIEDLENTLLPQADSYALPALIEIRPGVGGTEAAIFANELVEMYFQYANFKGWNCKFISK 184
Query: 179 TENASGSGVLEAILNIDEPGSYDKLKFEAGVHRVQRVPATESKGRTHTSTAAVIVLPKMG 238
+ + EAI +I+ G+Y L E GVHRVQR PATE+KGR HTSTA+VIVLP++
Sbjct: 185 SAVQGLEAITEAIFSIEGEGAYGHLMLEGGVHRVQRTPATETKGRVHTSTASVIVLPQVS 244
Query: 239 EESESDAYERTFKPDEIRIDVMRASGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHR 298
+ S Y+ + E++I+VMR+ G GGQHVN T+SAVRLTH P+GI +SMQ+ RSQH+
Sbjct: 245 NDESSSLYDSS----EVKIEVMRSRGAGGQHVNRTESAVRLTHIPTGITVSMQDSRSQHQ 300
Query: 299 NKAKAFAIXXXXXXXXXXXXXXXXXXXXXXDQVSTTDRSDKIRTYNYPQNRITDHRCGFT 358
NK KAF + +QV+++DRS+K+RTYN+ QNR+TDHR G +
Sbjct: 301 NKEKAFLVLNSRLAALNAAKENEAERLKRKNQVTSSDRSEKLRTYNFNQNRVTDHRIGLS 360
Query: 359 LYDIEGVMKG-ERLDDVIDAMDAFSSEQ 385
++D+ M+G E+ D+ ++ + ++ EQ
Sbjct: 361 MHDLSTFMQGEEKFDEFLEKIRIWNREQ 388
>At2g47020 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 395
Score = 218 bits (555), Expect = 1e-56
Identities = 119/307 (38%), Positives = 172/307 (55%), Gaps = 13/307 (4%)
Query: 83 EEVNQYKELQEILELDPSLREEAEADIAALLPDLNKTGDSLLNKLLPPHPFADKPSILEL 142
+E++ K L D + + A ++ + + + LL LLP ++ ILE+
Sbjct: 91 QEIDGLKSLVSESSDDKDMLDLAVGELDEAVEEEKRLQTLLLKSLLPKDEADERDCILEV 150
Query: 143 RPGVGGSEAMIFTQDLLNMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGSYDK 202
R G GG EA +F D+ MY Y+ WK++++ TE+ G EA I Y K
Sbjct: 151 RAGTGGEEASLFAMDIFRMYERYSQKKGWKFDIVDITESDM-KGYKEASAAICGASVYGK 209
Query: 203 LKFEAGVHRVQRVPATESKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDVMRA 262
LKFE+G+HRVQR+P TE GR HTS +V +LP ++D + + +++RID R+
Sbjct: 210 LKFESGIHRVQRIPITEKSGRIHTSAISVAILP------QADEVDVQLRNEDLRIDTYRS 263
Query: 263 SGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHRNKAKAFAIXXXXXXXXXXXXXXXX 322
G GGQH NTT+SAVR+ H P+G+++S+Q+ERSQH N+AKA +
Sbjct: 264 GGSGGQHANTTNSAVRIIHLPTGMMVSIQDERSQHMNRAKALKVLCARLYEIERLRIQSS 323
Query: 323 XXXXXXDQVSTTDRSDKIRTYNYPQNRITDHRCGFTLYDIEGVMKGERLDDVIDA----- 377
DQ+ + DRS +IRTYN+PQ R+TDHR G T + IE +M+GE LD IDA
Sbjct: 324 RSKLRSDQIGSGDRSGRIRTYNFPQGRVTDHRVGITHHAIEDMMQGENLDMFIDALLLRQ 383
Query: 378 -MDAFSS 383
MDA +S
Sbjct: 384 EMDAIAS 390
>Hs19923495 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 380
Score = 207 bits (526), Expect = 3e-53
Identities = 122/353 (34%), Positives = 191/353 (53%), Gaps = 20/353 (5%)
Query: 50 LEDLLSQGGSFD--LEKQKNFA--------KLSTIVDSYSKYREEVNQYKELQEILELDP 99
LE+L ++GG LE+Q +L ++ ++ +E+ + + L + + +
Sbjct: 33 LEELFARGGPLRTFLERQAGSEAHLKVRRPELLAVIKLLNEKEQELRETEHL--LHDENE 90
Query: 100 SLREEAEADIAALLPDLNKTGDSLLNKLLPPHPFADKPSILELRPGVGGSEAMIFTQDLL 159
LR+ AE +I ++ + ++ L+P + ILE+ GVGG EAM+FT ++
Sbjct: 91 DLRKLAENEITLCQKEITQLKHQIILLLVPSEETDENDLILEVTAGVGGQEAMLFTSEIF 150
Query: 160 NMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGSYDKLKFEAGVHRVQRVPATE 219
+MY YA + +W + + + G G+ A +I +Y +KFE GVHRVQRVP TE
Sbjct: 151 DMYQQYAAFKRWHFETLEYFPSELG-GLRHASASIGGSEAYRHMKFEGGVHRVQRVPKTE 209
Query: 220 SKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDVMRASGKGGQHVNTTDSAVRL 279
+GR HTST V +LP+ E P ++RID RASG GGQHVNTTDSAVR+
Sbjct: 210 KQGRVHTSTMTVAILPQPTE------INLVINPKDLRIDTKRASGAGGQHVNTTDSAVRI 263
Query: 280 THYPSGIVISMQEERSQHRNKAKAFAIXXXXXXXXXXXXXXXXXXXXXXDQVSTTDRSDK 339
H P+G+V Q+ERSQ +NK A Q+ + RS+K
Sbjct: 264 VHLPTGVVSECQQERSQLKNKELAMTKLRAKLYSMHLEEEINKRQNARKIQIGSKGRSEK 323
Query: 340 IRTYNYPQNRITDHRCGFTLYDIEGVMKGE-RLDDVIDAMDAFSSEQKAKQLL 391
IRTYN+PQNR+TDHR TL+D+E M+G+ LD+++ ++ ++ + +++
Sbjct: 324 IRTYNFPQNRVTDHRINKTLHDLETFMQGDYLLDELVQSLKEYADYESLVEII 376
>7298021 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 392
Score = 189 bits (479), Expect = 8e-48
Identities = 117/359 (32%), Positives = 188/359 (51%), Gaps = 15/359 (4%)
Query: 39 RAELYVNELRELEDLLSQGGSFDLEKQKNFAKLSTIVDSYSKYR---EEVNQYKELQEIL 95
+ + Y+ LR+ + + + + A+L +V + + R + K+++
Sbjct: 30 KLQAYLESLRQEYYAVRVNAAGNSKSYARLAQLEGVVSALEQRRVLERHITSAKDMEA-- 87
Query: 96 ELDPSLREEAEADIAALLPDLNKTGDSLLNKLLPPHPFADKPSIL-ELRPGVGGSEAMIF 154
E D +RE + + L K +LL +LL + P+++ L G GG EAM+F
Sbjct: 88 EKDEDMRELMREENEVYVDLLGKQDQALLQELLTLSDDEEYPALIFGLNAGAGGQEAMLF 147
Query: 155 TQDLLNMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGSYDKLKFEAGVHRVQR 214
Q+L MY Y + W+W + +E G+ A L + ++ L++EAGVHRVQR
Sbjct: 148 AQELYEMYTGYFEHMGWEWEEFA-SEGTDIGGLRHASLMVSGEDAFRWLRYEAGVHRVQR 206
Query: 215 VPATESKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDVMRASGKGGQHVNTTD 274
VPATE GR HTSTA++ V+P+ + A + +++I+ RASG GGQHVNTTD
Sbjct: 207 VPATEKSGRMHTSTASITVIPRPADIQVHIAEK------DLKIETKRASGAGGQHVNTTD 260
Query: 275 SAVRLTHYPSGIVISMQEERSQHRNKAKAFAIXXXXXXXXXXXXXXXXXXXXXXDQVSTT 334
SAVR+ H P+G+ + Q ERSQ +N+ A Q +
Sbjct: 261 SAVRIVHLPTGLAVEAQSERSQLKNRELAMKRLRSRLVQQQLESVEASKMATKKAQQGSL 320
Query: 335 DRSDKIRTYNYPQNRITDHRC-GFTLYDIEGVMK-GERLDDVIDAMDAFSSEQKAKQLL 391
+R++KIRTYN+ Q+RITDHR G TL+++ G +K G++L +I+ + ++ K+LL
Sbjct: 321 NRNEKIRTYNFVQDRITDHRIQGGTLHNLNGFLKGGDQLSGLIEKLQLEHRRERLKELL 379
>Hs4758744 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 445
Score = 173 bits (439), Expect = 4e-43
Identities = 110/327 (33%), Positives = 166/327 (50%), Gaps = 21/327 (6%)
Query: 81 YREEVNQYKELQEILELDPSLREEAEADIAALLPDLNKTGDSLLN--------KLLPPHP 132
Y+E + ++E+ + SL + E + L + +T D +N L+P
Sbjct: 120 YQETQETEQAIEELGSMCKSLNKRDEKQLLELALEERQTIDQKINMLYNELFQSLVPKEK 179
Query: 133 FADKPSILELRPG--VGGSEAMIFTQDLLNMYINYANYHKWKWNLISKTENASGSGVLEA 190
+ ILE+ G GG FT+++ +MY NY+ Y W++ ++ T A G+ A
Sbjct: 180 YDKNDVILEVTAGRTTGGDICQQFTREIFDMYQNYSCYKHWQFEPLNYTP-ADYGGLHHA 238
Query: 191 ILNIDEPGSYDKLKFEAGVHRVQRVPA---TESKGRTHTSTAAVIVLPKMGEESESDAYE 247
I G Y LK+E G+HRVQR+P + R HT T +VIVLP + D +
Sbjct: 239 AARISGDGVYKHLKYEGGIHRVQRIPEVGLSSRMQRIHTGTMSVIVLP------QPDEVD 292
Query: 248 RTFKPDEIRIDVMRASGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHRNKAKAFAIX 307
P ++RID RA G GGQHVN TDSAVRL H P+G+V+ Q+ERSQ +NK AF +
Sbjct: 293 VKLDPKDLRIDTFRAKGAGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVL 352
Query: 308 XXXXXXXXXXXXXXXXXXXXXDQVSTTDRSDKIRTYNYPQNRITDHRCGFTLYDI-EGVM 366
QV T +S++IRTYN+ Q+R++DHR + + DI E +
Sbjct: 353 RARLYQQIIEKDKRQQQSARKLQVGTRAQSERIRTYNFTQDRVSDHRIAYEVRDIKEFLC 412
Query: 367 KGERLDDVIDAMDAFSSEQKAKQLLQD 393
G+ LD +I + + E+ +LL +
Sbjct: 413 GGKGLDQLIQRLLQSADEEAIAELLDE 439
>CE17273 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 389
Score = 169 bits (428), Expect = 7e-42
Identities = 111/330 (33%), Positives = 170/330 (50%), Gaps = 18/330 (5%)
Query: 66 KNFAKLSTIVDSYSKYREEVNQYKELQEILELDPSLREEAEADIAALLPDLNKTGDSLLN 125
K AK+S S+ R +N KE +E +R+ AE D+ ++ +L L
Sbjct: 72 KQSAKVSDGRSELSQLRTIINDPKETEE-------MRKLAEVDVESIEENLETELQELAV 124
Query: 126 KLLPPHPFADKPSI-LELRPGVGGSEAMIFTQDLLNMYINYANYHKWKWNLISKTENASG 184
K++P + +EL G GG EAM+FT +LL+MY A + WKW+ + + +N
Sbjct: 125 KIVPLNNLDVLSKCQIELSCGAGGQEAMLFTGELLDMYQKLAAVNSWKWDPL-QVDNVPL 183
Query: 185 SGVLEAILNIDEPGSYDKLKFEAGVHRVQRVPATESKGRTHTSTAAVIVLPKMGEESESD 244
GV A++ + Y K++FEAGVHRVQRVP +S R HTSTA++ VLP+ E S
Sbjct: 184 GGVRSALIAVSGEKVYAKMRFEAGVHRVQRVPVNDS--RMHTSTASISVLPEPEEVSV-- 239
Query: 245 AYERTFKPDEIRIDVMRASGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHRNKAKAF 304
D ++I+ MRASG GGQ+VN +AVR+TH +GI + +ER QH N A+
Sbjct: 240 ----VVPSDSVKIEAMRASGPGGQNVNKRSTAVRMTHKETGIAVHCMDERFQHLNIQIAY 295
Query: 305 AIXXXXXXXXXXXXXXXXXXXXXXDQVSTTDRSDKIRTYNYPQNRITDHRCGFTLYDI-E 363
QV + R++KIRTYN+ +R+TDHR ++ + E
Sbjct: 296 KRLAAILMQKQVDAMLEKIVSKRKLQVGSKARAEKIRTYNFQHDRVTDHRIQMSITGVAE 355
Query: 364 GVMKGERLDDVIDAMDAFSSEQKAKQLLQD 393
+ GE L +I+ + E + ++++
Sbjct: 356 FLSAGETLQTMIERLQEQHLEDRLDHIIEN 385
>At3g62910 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 419
Score = 166 bits (420), Expect = 6e-41
Identities = 107/334 (32%), Positives = 170/334 (50%), Gaps = 15/334 (4%)
Query: 66 KNFAKLSTIVDSYSKYREEVNQYKELQEILEL---DPSLREEAEADIAALLPDLNKTGDS 122
++ ++L +V + ++++ Q E + + + D + E ++I +L ++ +
Sbjct: 92 QSMSELDEVVTVFRRFKDCEKQLLESKVLAKEAGDDEDMAEMIGSEINSLTKEIEELEKQ 151
Query: 123 LLNKLLPPHPFADKPSILELRPGVGGSEAMIFTQDLLNMYINYANYHKWKWNLISKTENA 182
L LLP P + +LE+R G GG EA I+T DL+ ++ + L+
Sbjct: 152 LKVLLLPSDPLDARNILLEVRAGTGGDEAAIWTGDLVGADVSEVQ----RAQLLEVFNGF 207
Query: 183 SGSGVLEAILNIDEPGSYDKLKFEAGVHRVQRVPATESKGRTHTSTAAVIVLPKMGEESE 242
G ++ I Y KLK+E+GVHRVQRVP TE++GR HTSTA V ++P E
Sbjct: 208 MLRGYKTCVMEIKGNRVYSKLKYESGVHRVQRVPQTETQGRVHTSTATVAIMP------E 261
Query: 243 SDAYERTFKPDEIRIDVMRASGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHRNKAK 302
+D E P +I + R+ G GGQ+VN ++A+ L H PSGI I EER+Q RNKA+
Sbjct: 262 ADEVEVVIDPKDIELTSARSGGAGGQNVNKVETAIDLFHKPSGIRIFCTEERTQIRNKAR 321
Query: 303 AFAIXXXXXXXXXXXXXXXXXXXXXXDQVSTTDRSDKIRTYNYPQNRITDHRCGFTLYDI 362
AF + QV T RS+KIRTYNY +R+TDHR + +
Sbjct: 322 AFQLLRAKLYEIKVREQQEKIRNERKSQVGTGARSEKIRTYNYKDSRVTDHRLKMN-FAL 380
Query: 363 EGVMKGERLDDVIDAMDAFSSEQKAKQLLQDMSA 396
+ G L+D + A A ++ ++L + ++A
Sbjct: 381 TTFLDG-ALEDAVQACAALEQKELMEELSESVAA 413
>At1g56350 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 426
Score = 120 bits (302), Expect = 3e-27
Identities = 97/353 (27%), Positives = 161/353 (45%), Gaps = 21/353 (5%)
Query: 23 SSEAVEFRPLHSSLISRAELYVNELR--ELEDLLSQGGSFDLEKQKNFAKLSTIVDSYSK 80
S + ++ R L+ R ++ EL +L D + G E K+ ++ +
Sbjct: 69 SIQVIKRRLQWKKLLVRLKVLSAELNKSDLWDDPTHAGKISREHGSLTGKMKGVMTFERE 128
Query: 81 YREEVNQYKELQEILELDPSLREEAEADIAALLPDLNKTGDSLLNKLLPPHPFADKPSI- 139
E ++ K +E E D L E + AL+ + + L LL AD
Sbjct: 129 LLEHIDMLKLAKE--ENDSELESET---LKALIDMRRVSKEKELEALLS----ADNDPCS 179
Query: 140 --LELRPGVGGSEAMIFTQDLLNMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEP 197
+E++ G GG+E+ + ++ MY +A K+ ++ + +G+ A + ++
Sbjct: 180 CYIEVQAGAGGTESNDWAAMVMEMYKTWAQRRKFSVTVVDEAPGEI-AGIKRATIKVNGE 238
Query: 198 GSYDKLKFEAGVHRVQRVPATESKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRI 257
+Y K E GVHR+ R+ +S R HTS AAV V+P +G+ S ++RI
Sbjct: 239 YAYGYAKAEVGVHRLVRISPFDSGKRRHTSFAAVAVIPILGDGST----RVEINDSDLRI 294
Query: 258 DVMRASGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHRNKAKAFAIXXXXXXXXXXX 317
+ R+ G GGQH NTTDSAVR+ H P+GI + Q ERSQH NKA A A+
Sbjct: 295 ERFRSGGAGGQHANTTDSAVRIVHIPTGITATCQNERSQHSNKASAMAV-LQSRLDQLEM 353
Query: 318 XXXXXXXXXXXDQVSTTDRSDKIRTY-NYPQNRITDHRCGFTLYDIEGVMKGE 369
++ ++IRTY +P + D R + + D + V++G+
Sbjct: 354 ARQTAMNAQHTQSLTEISWGNQIRTYVLHPYRMVKDLRTNYEVSDPDSVLEGD 406
>At5g36170 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 456
Score = 120 bits (301), Expect = 4e-27
Identities = 97/340 (28%), Positives = 156/340 (45%), Gaps = 17/340 (5%)
Query: 46 ELRELEDLLSQGGSFDLEKQKNFAKLSTIVDSYSKYREEVNQYKELQEILELDPSLREEA 105
E+ LE + +D ++ K LS++ D + R ++++K + E E L EE
Sbjct: 110 EITNLESKATDTSFWD-DRTKAQETLSSLNDLKDRMRL-LSEFKTMVEDAETIVKLTEEM 167
Query: 106 EADIAALLPD-------LNKTGDSLLNKLLPPHPFADKPSILELRPGVGGSEAMIFTQDL 158
++ +LL + LNK+ D L P+ + +++ + G GG++A + L
Sbjct: 168 DSTDVSLLEEAMGIIKELNKSLDKFELTQLLSGPYDKEGAVVYITAGAGGTDAQDWADML 227
Query: 159 LNMYINYANYHKWKWNLISKTENASGSGVLEAILNIDEPGSYDKLKFEAGVHRVQRVPAT 218
L MY+ + ++K ++ + N +G+ A L I+ +Y + E G HR+ R
Sbjct: 228 LRMYMRWGEKQRYKTKVVEMS-NGEEAGIKSATLEIEGRYAYGYISGEKGTHRIVRQSPF 286
Query: 219 ESKGRTHTSTAAVIVLPKMGEESESDAYERTFKPDEIRIDVMRASGKGGQHVNTTDSAVR 278
SKG TS + V V+P + EE A +++ I RA GKGGQ+VN ++AVR
Sbjct: 287 NSKGLRQTSFSGVEVMPLLPEE----AVGIEIPEEDLDISFTRAGGKGGQNVNKVETAVR 342
Query: 279 LTHYPSGIVISMQEERSQHRNKAKAFAIXXXXXXXXXXXXXXXXXXXXXXDQVSTTDRSD 338
+TH P+G+ + EERSQ NK +A D V +
Sbjct: 343 ITHIPTGVAVRCTEERSQLANKTRALIRLKAKLMVIAEEQRATEIKEIRGDAVK-AEWGQ 401
Query: 339 KIRTYNY-PQNRITDHRCGFTLYDIEGVMKGERLDDVIDA 377
+IR Y + P + D R G DI VM G+ LD I A
Sbjct: 402 QIRNYVFHPYKLVKDVRTGHETSDITSVMDGD-LDPFIKA 440
>At1g33330 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 255
Score = 61.6 bits (148), Expect = 2e-09
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 254 EIRIDVMRASGKGGQHVNTTDSAVRLTHYPSGIVISMQEERSQHRNKAKA 303
+ R++ R SG GGQH N DSAVRL H P+GIV E+RSQH+N+A A
Sbjct: 97 QCRLETFRVSGPGGQHRNKRDSAVRLKHLPTGIVAQAVEDRSQHKNRASA 146
>Hs18569458 [J] KOG2726 Mitochondrial polypeptide chain release factor
Length = 435
Score = 58.9 bits (141), Expect = 1e-08
Identities = 24/63 (38%), Positives = 46/63 (72%), Gaps = 1/63 (1%)
Query: 330 QVSTTDRSDKIRTYNYPQNRITDHRCGFTLYDIEGVMKGE-RLDDVIDAMDAFSSEQKAK 388
Q+ + RS+KIRTYN+PQN++TDHR +L+D+E VM+G+ LD+++ ++ ++ +
Sbjct: 369 QIGSKGRSEKIRTYNFPQNQVTDHRISKSLHDLETVMQGDYLLDELVQSLKKYADYESLV 428
Query: 389 QLL 391
+++
Sbjct: 429 EII 431
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.315 0.132 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,585,301
Number of Sequences: 60738
Number of extensions: 884981
Number of successful extensions: 2230
Number of sequences better than 1.0e-05: 12
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2190
Number of HSP's gapped (non-prelim): 12
length of query: 396
length of database: 30,389,216
effective HSP length: 108
effective length of query: 288
effective length of database: 23,829,512
effective search space: 6862899456
effective search space used: 6862899456
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)