ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV4195 good R KOG1491 General function prediction only Predicted GTP-binding protein (ODN superfamily)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV4195 1448683 1449909 409
(409 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YGR210c [R] KOG1491 Predicted GTP-binding protein (ODN superfamily) 670 0.0
SPBC428.15 [R] KOG1491 Predicted GTP-binding protein (ODN superf... 459 e-129
CE14708 [R] KOG1491 Predicted GTP-binding protein (ODN superfamily) 83 6e-16
At1g30580 [R] KOG1491 Predicted GTP-binding protein (ODN superfa... 81 2e-15
ECU06g1190 [R] KOG1491 Predicted GTP-binding protein (ODN superf... 77 5e-14
Hs9558757 [R] KOG1491 Predicted GTP-binding protein (ODN superfa... 77 6e-14
At1g56050 [R] KOG1491 Predicted GTP-binding protein (ODN superfa... 75 2e-13
7291084 [R] KOG1491 Predicted GTP-binding protein (ODN superfamily) 74 4e-13
YHL014c [R] KOG1491 Predicted GTP-binding protein (ODN superfamily) 68 3e-11
At1g07620_2 [R] KOG1489 Predicted GTP-binding protein (ODN super... 66 1e-10
7297396 [R] KOG1489 Predicted GTP-binding protein (ODN superfamily) 62 2e-09
SPAP8A3.11c [R] KOG1489 Predicted GTP-binding protein (ODN super... 62 2e-09
YBR025c [R] KOG1491 Predicted GTP-binding protein (ODN superfamily) 60 6e-09
SPAC27E2.03c [R] KOG1491 Predicted GTP-binding protein (ODN supe... 59 1e-08
SPACUNK4.13c [R] KOG1491 Predicted GTP-binding protein (ODN supe... 57 6e-08
YHR168w [R] KOG1489 Predicted GTP-binding protein (ODN superfamily) 54 4e-07
SPAC9.07c [T] KOG1487 GTP-binding protein DRG1 (ODN superfamily) 50 6e-06
>YGR210c [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 411
Score = 670 bits (1728), Expect = 0.0
Identities = 333/410 (81%), Positives = 355/410 (86%), Gaps = 2/410 (0%)
Query: 1 MPRDPLIGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQ 60
MPRDPLIGIVGKPSSGKSTTLNSLTDA A VGAFPFTTIEPN+ATGYLQV CACSR G +
Sbjct: 1 MPRDPLIGIVGKPSSGKSTTLNSLTDAGAAVGAFPFTTIEPNQATGYLQVECACSRFGKE 60
Query: 61 KLCKPNYGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGT 120
LCKPNYGWC G RHIPI LLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGT
Sbjct: 61 DLCKPNYGWCSKGKRHIPIKLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGT 120
Query: 121 TDAEGKNTRGYDPLQDIVWLQDEIRLWIEGNLHKRWGSIVRKHTATKSSAVDTLQQQFGG 180
TDAEGKNTRGYDPL DI WLQDEIRLW+EGNL KRWGSIVRKHTATKSS VDTLQ QFGG
Sbjct: 121 TDAEGKNTRGYDPLNDIEWLQDEIRLWVEGNLKKRWGSIVRKHTATKSSIVDTLQAQFGG 180
Query: 181 YGSHAPMIQRALGRIPGLPPLEQWDNEWITEVVKSFMQEKFPTVLALNKMDHPDADKNVS 240
YGSHAPMIQ+AL R+ GLPPLE+WD+EWIT VVKSFM EKFPTVLALNK+DHPDADKNVS
Sbjct: 181 YGSHAPMIQKALDRLKGLPPLEKWDDEWITRVVKSFMMEKFPTVLALNKIDHPDADKNVS 240
Query: 241 KIMLKYPDVKCVLTSAITEVFLRKLKKQGFIRYXXXXXXXXXXXXX-XXLKPLDEKLIQR 299
KIMLKYPD K VLTSA+TEVFLRKLKKQGFI Y LKPLD+K++ R
Sbjct: 241 KIMLKYPDTKAVLTSAVTEVFLRKLKKQGFILYEEGTEFVDTFEDEPDKLKPLDDKILNR 300
Query: 300 IEVIRDLVLYRFGSTGVVQVLQAAASTLNLIPVYTVRNIHTFAGGNGENVFRDCFLVKKG 359
IE IRDLVLYRFGSTGVVQVLQAA L LIPVYTV+NI TF GGNG NVFRDCFLVK+G
Sbjct: 301 IENIRDLVLYRFGSTGVVQVLQAATDILGLIPVYTVKNIQTFTGGNGTNVFRDCFLVKRG 360
Query: 360 TTVGKVATYIM-GDVTVAAIETVGGIRVSEDDKVDEGVNDILTFKLAPKS 408
T VGKVA YIM G+VT+A+IETVGG+RVSE+ V+ G NDIL FK+AP+S
Sbjct: 361 TPVGKVARYIMGGEVTIASIETVGGVRVSEESLVEPGKNDILGFKIAPRS 410
>SPBC428.15 [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 409
Score = 459 bits (1180), Expect = e-129
Identities = 235/406 (57%), Positives = 285/406 (69%), Gaps = 4/406 (0%)
Query: 1 MPRDPLIGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQ 60
M RD LIG VGKPSSGKST LN+LTDA+A+ G FPFTTIEPNRA GY Q+ CACSR GLQ
Sbjct: 1 MGRDILIGFVGKPSSGKSTMLNALTDATAKTGNFPFTTIEPNRAIGYAQIECACSRFGLQ 60
Query: 61 KLCKPNYGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGT 120
CKP YG C+NG+R IPI LLDVAGL+PGAH+G+GLGNKFLDDLRHADAL+HVVDVSGT
Sbjct: 61 DKCKPIYGGCKNGVRSIPIQLLDVAGLIPGAHAGKGLGNKFLDDLRHADALVHVVDVSGT 120
Query: 121 TDAEGKNTRGYDPLQDIVWLQDEIRLWIEGNLHKRWGSIVRKHTATKSSAVDTLQQQFGG 180
TDAEGK RGYDP DI WL EI WI NL ++W +IVR+H ATK++ V+TLQ QF G
Sbjct: 121 TDAEGKVCRGYDPSVDIAWLYKEITAWIGNNLREKWPNIVRRHIATKANPVNTLQSQFSG 180
Query: 181 YGSHAPMIQRALGRIPGLPPLEQWDNEWITEVVKSFMQEKFPTVLALNKMDHPDADKNVS 240
YGS + + L + PLE+WD++ I +VV F+ KFPTV+ALNK+DHPDAD N+S
Sbjct: 181 YGSTPAVTAKVLDSLHLDTPLEKWDDDTIEKVVNRFVDIKFPTVIALNKIDHPDADANIS 240
Query: 241 KIMLKYPDVKCVLTSAITEVFLRKLKKQGFIRYXXXXXXXXXXXX--XXXLKPLDEKLIQ 298
KI K + VL SAI+EVFLR+L KQGF++Y LKPL E L
Sbjct: 241 KIARKEDPNRLVLASAISEVFLRRLAKQGFVKYEEGSEFVDTLDDFPDSGLKPLSENLKT 300
Query: 299 RIEVIRDLVLYRFGSTGVVQVLQAAASTLNLIPVYTVRNIHTFAGGNGENVFRDCFLVKK 358
RI ++D+VL+R GSTGV VL A LNLIPV+ V+N+H FA E VFRDC LVK+
Sbjct: 301 RIADLQDMVLFRHGSTGVCNVLAKAMELLNLIPVFPVKNVHNFANSPNEGVFRDCILVKQ 360
Query: 359 GTTVGKVATYIMGDVTVAAIETVGGIRVSEDDKVDEGVNDILTFKL 404
GTT G+V+ ++G ++ + G V E D + G DIL F+L
Sbjct: 361 GTTAGQVSQMVLGGEAMSIVGVNG--NVGESDVIVPGKTDILHFRL 404
>CE14708 [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 395
Score = 83.2 bits (204), Expect = 6e-16
Identities = 64/180 (35%), Positives = 87/180 (47%), Gaps = 30/180 (16%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
+GI+G P+ GKST N LT + AQ FPF TI+PN SRV +Q
Sbjct: 24 VGILGLPNVGKSTFFNVLTKSEAQAENFPFCTIDPNE-----------SRVAVQ---DDR 69
Query: 67 YGWCENGLR---HIPIML--LDVAGLVPGAHSGRGLGNKFLDDLRHADALIHV---VDVS 118
+ W N + +P L D+AGLV GA G+GLGN FL + DAL H+ D
Sbjct: 70 FDWLVNHYKPASKVPAFLNVTDIAGLVKGASEGQGLGNAFLSHVSACDALFHLCRAFDDD 129
Query: 119 GTTDAEGKNTRGYDPLQDIVWLQDEI----RLWIEGNLHKRWGSIVRKHTATKSSAVDTL 174
T EG+ DP++D+ + +E+ +I+G L K R + TK DTL
Sbjct: 130 DVTHVEGE----VDPVRDLEIISNELFAKDLQFIDGPLDKVEKLFTRANDKTKKIEYDTL 185
>At1g30580 [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 394
Score = 81.3 bits (199), Expect = 2e-15
Identities = 58/143 (40%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVG-LQKLCKP 65
IGIVG P+ GKST N+LT S FPF TIEPN A +VN R L + KP
Sbjct: 27 IGIVGLPNVGKSTLFNTLTKLSIPAENFPFCTIEPNEA----RVNIPDERFDWLCQTYKP 82
Query: 66 NYGWCENGLRHIPIML--LDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDA 123
IP L D+AGLV GAH G+GLGN FL +R D + HV+ D
Sbjct: 83 K--------SEIPAFLEIHDIAGLVRGAHEGQGLGNNFLSHIRAVDGIFHVLRAFEDADI 134
Query: 124 EGKNTRGYDPLQDIVWLQDEIRL 146
+ DP++D+ + +E+RL
Sbjct: 135 IHVDDI-VDPVRDLETITEELRL 156
>ECU06g1190 [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 369
Score = 77.0 bits (188), Expect = 5e-14
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 10/140 (7%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
+GIVG P+ GKST N LT + +PF TI+P+ +Q ++ L K
Sbjct: 19 MGIVGLPNVGKSTLFNFLTRNNVPAENYPFCTIDPSEGRVEIQDE------RIEFLAKK- 71
Query: 67 YGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDAEGK 126
+ + + + D+AGLV GA +G GLGN FLD++R+ D + HVV T+
Sbjct: 72 --YSPQNVARAYLSVTDIAGLVKGASAGVGLGNHFLDNIRNVDGIFHVVRCFEDTEV-AH 128
Query: 127 NTRGYDPLQDIVWLQDEIRL 146
G DP++DI + +E+RL
Sbjct: 129 FEDGVDPIRDIEIVNEELRL 148
>Hs9558757 [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 396
Score = 76.6 bits (187), Expect = 6e-14
Identities = 54/145 (37%), Positives = 75/145 (51%), Gaps = 20/145 (13%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
IGIVG P+ GKST N LT++ A FPF TI+PN + +V R LC+
Sbjct: 25 IGIVGLPNVGKSTFFNVLTNSQASAENFPFCTIDPNES----RVPVPDERFDF--LCQ-- 76
Query: 67 YGWCENGLRHIPIML--LDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVV---DVSGTT 121
IP L +D+AGLV GAH+G+GLGN FL + D + H+ + T
Sbjct: 77 ---YHKPASKIPAFLNVVDIAGLVKGAHNGQGLGNAFLSHISACDGIFHLTRAFEDDDIT 133
Query: 122 DAEGKNTRGYDPLQDIVWLQDEIRL 146
EG DP++DI + +E++L
Sbjct: 134 HVEG----SVDPIRDIEIIHEELQL 154
>At1g56050 [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 418
Score = 74.7 bits (182), Expect = 2e-13
Identities = 53/132 (40%), Positives = 69/132 (52%), Gaps = 14/132 (10%)
Query: 8 GIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPNY 67
GIVG P+ GKST N++ + AQ FPF TIEPN G + V + +V L KL
Sbjct: 57 GIVGLPNVGKSTLFNAVENGKAQAANFPFCTIEPN--VGIVAVPDSRLQV-LSKL----- 108
Query: 68 GWCENGLRHIP--IMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDAEG 125
+ +P I +D+AGLV GA G GLGNKFL +R D+++ VV D
Sbjct: 109 ---SGSQKTVPASIEFVDIAGLVKGASQGEGLGNKFLSHIREVDSILQVVRCFEDNDIIH 165
Query: 126 KNTRGYDPLQDI 137
N + DP DI
Sbjct: 166 VNGK-VDPKSDI 176
>7291084 [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 399
Score = 73.9 bits (180), Expect = 4e-13
Identities = 58/154 (37%), Positives = 79/154 (50%), Gaps = 20/154 (12%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVG-LQKLCKP 65
IGIVG P+ GKST N LT ++A FPF TI+PN +V R L + KP
Sbjct: 24 IGIVGVPNVGKSTFFNVLTQSAAPAENFPFCTIKPNE--NKRRVPVPDERFDYLVEYHKP 81
Query: 66 NYGWCENGLRHIPIML--LDVAGLVPGAHSGRGLGNKFLDDLRHADALIHV---VDVSGT 120
+P L +D+AGLV GA G+GLGN FL + DA+ H+ +
Sbjct: 82 --------ASVVPAYLNVVDIAGLVKGAAEGQGLGNDFLSHISACDAIFHLCRAFEDPDV 133
Query: 121 TDAEGKNTRGYDPLQDIVWLQDEIRLWIEGNLHK 154
T EG+ DP++D+ + +E+RL E NL K
Sbjct: 134 THVEGE----VDPVRDLEIISEELRLKDEENLLK 163
>YHL014c [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 405
Score = 67.8 bits (164), Expect = 3e-11
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 21/149 (14%)
Query: 4 DPLIGIVGKPSSGKSTTLNSLTDASAQVGA-FPFTTIEPNRATGYLQVNCACSRVGLQKL 62
+P GIVG + GKST ++T++ A +PF TI+ C++V + +
Sbjct: 16 NPTSGIVGLANVGKSTFFQAITNSKLGNPANYPFATIDAE-----------CAKVNIPSV 64
Query: 63 CKPNYGWCENGLRHIP--IMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVD---V 117
N + +P + + D+AGL GA G GLGNKFL+D+RH + + VV
Sbjct: 65 PLSNLLRIYQSAKCVPGTLTIYDIAGLTRGASQGHGLGNKFLNDIRHVEGIFQVVRGFLK 124
Query: 118 SGTTDAEGKNTRGYDPLQDIVWLQDEIRL 146
T EG DP++D+ +QDE+ L
Sbjct: 125 EDITHIEG----NVDPVRDLSVVQDELIL 149
>At1g07620_2 [R] KOG1489 Predicted GTP-binding protein (ODN superfamily)
Length = 469
Score = 65.9 bits (159), Expect = 1e-10
Identities = 45/144 (31%), Positives = 65/144 (44%), Gaps = 30/144 (20%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
+G+VG P++GKST L +L+ A +VG + FTT+ PN L N
Sbjct: 282 VGLVGMPNAGKSTLLGALSRAKPRVGHYAFTTLRPN-------------------LGNVN 322
Query: 67 YGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDAEGK 126
Y + + D+ GL+ GAH RGLG+ FL + L +VVD++ D
Sbjct: 323 YD-------DFSMTVADIPGLIKGAHQNRGLGHNFLRHIERTKVLAYVVDLASGLD---- 371
Query: 127 NTRGYDPLQDIVWLQDEIRLWIEG 150
G P Q + L E+ EG
Sbjct: 372 GCEGLTPWQQLRDLVMELEFHEEG 395
>7297396 [R] KOG1489 Predicted GTP-binding protein (ODN superfamily)
Length = 381
Score = 62.0 bits (149), Expect = 2e-09
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 25/112 (22%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
+G++G P++GKST LN+LT A +V + FTT+ P+ T
Sbjct: 208 VGLIGYPNAGKSTLLNALTRAKPKVAPYAFTTLRPHLGTVQYD----------------- 250
Query: 67 YGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVS 118
H+ + + D+ GLVP AH +GLG +FL L+ V+D S
Sbjct: 251 --------DHVQLTIADLPGLVPDAHRNKGLGIQFLKHAERCTLLLFVLDAS 294
>SPAP8A3.11c [R] KOG1489 Predicted GTP-binding protein (ODN superfamily)
Length = 419
Score = 61.6 bits (148), Expect = 2e-09
Identities = 49/171 (28%), Positives = 76/171 (43%), Gaps = 36/171 (21%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
IG+VG P++GKST LN LT + ++VG + FTTI P ++G K P
Sbjct: 239 IGLVGLPNAGKSTLLNCLTASKSKVGEYEFTTIYP--------------KIGTIKTTMP- 283
Query: 67 YGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDAEGK 126
+ L D+ G++ GA G+GLG FL + A L V+D+
Sbjct: 284 -----DDHSSFQYRLADIPGIIKGASDGKGLGYDFLRHVERAKMLCLVIDI--------- 329
Query: 127 NTRGYDPLQDIVWLQDEIRLWIEGNLHKRWGSIVRKHTATKSSAVDTLQQQ 177
N + P L LW E N +++ +++ K ++ DT +Q
Sbjct: 330 NPKAKIPADQAFQL-----LWDELNKYEK--NLINKVALVIANKADTAAEQ 373
>YBR025c [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 394
Score = 60.1 bits (144), Expect = 6e-09
Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 12/141 (8%)
Query: 8 GIVGKPSSGKSTTLNSLTDASAQVGA-FPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
GIVG + GKST ++T A +PF TI+P A +V R KLC+
Sbjct: 24 GIVGLANVGKSTFFQAITRCPLGNPANYPFATIDPEEA----RVIVPSPR--FDKLCEIY 77
Query: 67 YGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDAEGK 126
H+ + D+AGL GA +G GLGN FL +R D++ VV DAE
Sbjct: 78 KKTASEVPAHLTVY--DIAGLTKGASAGEGLGNAFLSHIRSVDSIYQVVRC--FDDAEII 133
Query: 127 NTRG-YDPLQDIVWLQDEIRL 146
+ G DP++D+ + E+RL
Sbjct: 134 HVEGDVDPVRDLEIINQELRL 154
>SPAC27E2.03c [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 392
Score = 59.3 bits (142), Expect = 1e-08
Identities = 50/146 (34%), Positives = 71/146 (48%), Gaps = 27/146 (18%)
Query: 8 GIVGKPSSGKSTTLNSLTDASAQVGA-FPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
GIVG P+ GKST ++T + A +P+ TI+P A K+ P+
Sbjct: 24 GIVGMPNVGKSTFFRAITKSVLGNPANYPYATIDPEEA----------------KVAVPD 67
Query: 67 --YGW-CE--NGLRHIPIML--LDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSG 119
+ W CE +P L D+AGL GA +G GLGN FL +R DA+ V V
Sbjct: 68 ERFDWLCEAYKPKSRVPAFLTVFDIAGLTKGASTGVGLGNAFLSHVRAVDAIYQV--VRA 125
Query: 120 TTDAEGKNTRG-YDPLQDIVWLQDEI 144
DAE + G DP++D+ + DE+
Sbjct: 126 FDDAEIIHVEGDVDPIRDLSIIVDEL 151
>SPACUNK4.13c [R] KOG1491 Predicted GTP-binding protein (ODN superfamily)
Length = 407
Score = 56.6 bits (135), Expect = 6e-08
Identities = 55/180 (30%), Positives = 80/180 (43%), Gaps = 30/180 (16%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGA-FPFTTIEPNRATGYL---QVNCACSRVGLQKL 62
IGIVG P+ GKST LT + A +PF TI+P A + Q C ++
Sbjct: 48 IGIVGMPNIGKSTLFQILTKTNLGNPANYPFATIDPVHAKAPVLDSQYELLC------EI 101
Query: 63 CKPNYGWCENGLRHIPIMLL--DVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGT 120
+P IP L D AGL + G GLGN FL ++R DAL +V
Sbjct: 102 YQPK--------TRIPAQLTIYDTAGLTRNSSKGEGLGNAFLSNIRSVDALFQLVRAFPE 153
Query: 121 TDAEGKNTRGYDPLQDIVWLQDEIRL----WIEGNLHKRWGSIVRKHTATKSSAVDTLQQ 176
+ DP++D+ +Q+E+ L ++E L K S T + A+DT ++
Sbjct: 154 AQVPHVE-KSVDPVRDLQIIQEELLLKDAEFLESYLKKEGRS-----PKTCAKALDTARR 207
>YHR168w [R] KOG1489 Predicted GTP-binding protein (ODN superfamily)
Length = 499
Score = 53.9 bits (128), Expect = 4e-07
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 35/138 (25%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
+G++G P++GKST LN +++A ++G + FTT+ P T L
Sbjct: 342 LGLIGLPNAGKSTILNKISNAKPKIGHWQFTTLSPTIGTVSL------------------ 383
Query: 67 YGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDVSGTTDAEGK 126
G + D+ G++ GA +G+G +FL + ++ + V+D+S
Sbjct: 384 ------GFGQDVFTVADIPGIIQGASLDKGMGLEFLRHIERSNGWVFVLDLSNK------ 431
Query: 127 NTRGYDPLQDIVWLQDEI 144
+PL D+ L +E+
Sbjct: 432 -----NPLNDLQLLIEEV 444
>SPAC9.07c [T] KOG1487 GTP-binding protein DRG1 (ODN superfamily)
Length = 366
Score = 50.1 bits (118), Expect = 6e-06
Identities = 33/111 (29%), Positives = 49/111 (43%), Gaps = 26/111 (23%)
Query: 7 IGIVGKPSSGKSTTLNSLTDASAQVGAFPFTTIEPNRATGYLQVNCACSRVGLQKLCKPN 66
+G +G PS GKST + LT ++ A+ FTT+ G LQ N A
Sbjct: 66 VGFIGFPSVGKSTLMTQLTGTRSEAAAYEFTTL--TTVPGVLQYNGA------------- 110
Query: 67 YGWCENGLRHIPIMLLDVAGLVPGAHSGRGLGNKFLDDLRHADALIHVVDV 117
I +LD+ G++ GA GRG G + + R + + V+DV
Sbjct: 111 -----------KIQILDLPGIIEGAKDGRGRGKQVITVARTCNLIFIVLDV 150
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.138 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,076,284
Number of Sequences: 60738
Number of extensions: 992869
Number of successful extensions: 2617
Number of sequences better than 1.0e-05: 17
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2598
Number of HSP's gapped (non-prelim): 20
length of query: 409
length of database: 30,389,216
effective HSP length: 109
effective length of query: 300
effective length of database: 23,768,774
effective search space: 7130632200
effective search space used: 7130632200
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)