ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV4389 good O KOG1724 Posttranslational modification, protein turnover, chaperones SCF ubiquitin ligase, Skp1 component
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV4389 1508433 1507888 -182
(182 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDR328c [O] KOG1724 SCF ubiquitin ligase Skp1 component 258 2e-69
SPBC409.05 [O] KOG1724 SCF ubiquitin ligase Skp1 component 184 8e-47
Hs4507387 [O] KOG1724 SCF ubiquitin ligase Skp1 component 156 1e-38
Hs22046564 [O] KOG1724 SCF ubiquitin ligase Skp1 component 152 2e-37
CE10580 [O] KOG1724 SCF ubiquitin ligase Skp1 component 138 4e-33
7290072 [O] KOG1724 SCF ubiquitin ligase Skp1 component 138 4e-33
7303524 [O] KOG1724 SCF ubiquitin ligase Skp1 component 135 2e-32
At5g42190 [O] KOG1724 SCF ubiquitin ligase Skp1 component 134 7e-32
At1g75950 [O] KOG1724 SCF ubiquitin ligase Skp1 component 134 9e-32
CE10578 [O] KOG1724 SCF ubiquitin ligase Skp1 component 125 2e-29
At4g34210 [O] KOG1724 SCF ubiquitin ligase Skp1 component 125 2e-29
At1g20140 [O] KOG1724 SCF ubiquitin ligase Skp1 component 125 2e-29
At4g34470 [O] KOG1724 SCF ubiquitin ligase Skp1 component 122 2e-28
CE16037 [O] KOG1724 SCF ubiquitin ligase Skp1 component 121 5e-28
7291582 [O] KOG1724 SCF ubiquitin ligase Skp1 component 120 8e-28
At2g25700 [O] KOG1724 SCF ubiquitin ligase Skp1 component 118 5e-27
At3g21850 [O] KOG1724 SCF ubiquitin ligase Skp1 component 116 2e-26
At1g10230 [O] KOG1724 SCF ubiquitin ligase Skp1 component 114 1e-25
At3g60010 [O] KOG1724 SCF ubiquitin ligase Skp1 component 112 2e-25
At3g25650 [O] KOG1724 SCF ubiquitin ligase Skp1 component 109 2e-24
At2g03170 [O] KOG1724 SCF ubiquitin ligase Skp1 component 108 4e-24
7293650 [O] KOG1724 SCF ubiquitin ligase Skp1 component 105 3e-23
CE24523 [O] KOG1724 SCF ubiquitin ligase Skp1 component 103 1e-22
At3g21860 [O] KOG1724 SCF ubiquitin ligase Skp1 component 103 1e-22
7293651 [O] KOG1724 SCF ubiquitin ligase Skp1 component 102 2e-22
At3g60020 [O] KOG1724 SCF ubiquitin ligase Skp1 component 100 2e-21
CE20827 [O] KOG1724 SCF ubiquitin ligase Skp1 component 99 4e-21
At2g03160 [O] KOG1724 SCF ubiquitin ligase Skp1 component 97 1e-20
Hs18580689_1 [O] KOG1724 SCF ubiquitin ligase Skp1 component 96 2e-20
At3g21830 [O] KOG1724 SCF ubiquitin ligase Skp1 component 96 3e-20
At2g03190 [O] KOG1724 SCF ubiquitin ligase Skp1 component 95 5e-20
Hs22044197_2 [O] KOG1724 SCF ubiquitin ligase Skp1 component 94 1e-19
CE17593 [O] KOG1724 SCF ubiquitin ligase Skp1 component 91 1e-18
CE24062 [O] KOG1724 SCF ubiquitin ligase Skp1 component 90 1e-18
CE17591 [O] KOG1724 SCF ubiquitin ligase Skp1 component 89 3e-18
7293652 [O] KOG1724 SCF ubiquitin ligase Skp1 component 89 3e-18
CE22054 [O] KOG1724 SCF ubiquitin ligase Skp1 component 84 8e-17
CE17590 [O] KOG1724 SCF ubiquitin ligase Skp1 component 82 4e-16
CE22057 [O] KOG1724 SCF ubiquitin ligase Skp1 component 81 7e-16
CE15814 [O] KOG1724 SCF ubiquitin ligase Skp1 component 81 7e-16
CE17592 [O] KOG1724 SCF ubiquitin ligase Skp1 component 77 1e-14
CE19090 [O] KOG1724 SCF ubiquitin ligase Skp1 component 72 4e-13
At2g20160 [O] KOG1724 SCF ubiquitin ligase Skp1 component 72 4e-13
CE06317 [O] KOG1724 SCF ubiquitin ligase Skp1 component 72 5e-13
CE19451 [O] KOG1724 SCF ubiquitin ligase Skp1 component 68 6e-12
CE02455 [O] KOG1724 SCF ubiquitin ligase Skp1 component 65 7e-11
CE04194 [O] KOG1724 SCF ubiquitin ligase Skp1 component 64 1e-10
At2g45950 [O] KOG1724 SCF ubiquitin ligase Skp1 component 57 1e-08
At3g21840 [O] KOG1724 SCF ubiquitin ligase Skp1 component 51 1e-06
CE06159 [O] KOG1724 SCF ubiquitin ligase Skp1 component 50 1e-06
CE03568 [O] KOG1724 SCF ubiquitin ligase Skp1 component 49 5e-06
>YDR328c [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 194
Score = 258 bits (660), Expect = 2e-69
Identities = 136/190 (71%), Positives = 142/190 (74%), Gaps = 14/190 (7%)
Query: 7 NVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXX---- 62
NVVLVS EGERF VD+KIAERSLLLKNYL D++
Sbjct: 5 NVVLVSGEGERFTVDKKIAERSLLLKNYLNDMHDSNLQNNSDSESDSDSETNHKSKDNNN 64
Query: 63 ----------IVMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFL 112
IVMPVPNVRSSVLQKVIEWA HH+DSNFP SRK+APVD WDREFL
Sbjct: 65 GDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDDDDSRKSAPVDSWDREFL 124
Query: 113 KVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAI 172
KVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGR+PEEIRRTFNIVNDFTPEEEAAI
Sbjct: 125 KVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRSPEEIRRTFNIVNDFTPEEEAAI 184
Query: 173 RRENEWAEDR 182
RRENEWAEDR
Sbjct: 185 RRENEWAEDR 194
>SPBC409.05 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 161
Score = 184 bits (466), Expect = 8e-47
Identities = 91/178 (51%), Positives = 121/178 (67%), Gaps = 23/178 (12%)
Query: 8 VVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMPV 67
+ L+S + E FVVD+ IAERS+L+KN L+D+ + +P+
Sbjct: 4 IKLISSDNEEFVVDQLIAERSMLIKNMLEDVGE--------------------INVPIPL 43
Query: 68 PNVRSSVLQKVIEWAVHHKDSNFPXXXXXXS---RKAAPVDPWDREFLKVDQEMLYEIIL 124
PNV S+VL+KV+EW HHK+ + +K+ +D WDR+F+ VDQEML+EI+L
Sbjct: 44 PNVSSNVLRKVLEWCEHHKNDLYSGTEEESDIRLKKSTDIDEWDRKFMAVDQEMLFEIVL 103
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAEDR 182
A+NYL+IKPLLD GCK VA MIRG++PE+IR+TFNI NDFTPEEE IR+ENEWAEDR
Sbjct: 104 ASNYLDIKPLLDTGCKTVANMIRGKSPEDIRKTFNIPNDFTPEEEEQIRKENEWAEDR 161
>Hs4507387 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 163
Score = 156 bits (395), Expect = 1e-38
Identities = 83/177 (46%), Positives = 111/177 (61%), Gaps = 17/177 (9%)
Query: 7 NVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMP 66
++ L S +GE F VD +IA++S+ +K L+DL +P
Sbjct: 3 SIKLQSSDGEIFEVDVEIAKQSVTIKTMLEDLGMDDEGDDDP----------------VP 46
Query: 67 VPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDP-WDREFLKVDQEMLYEIILA 125
+PNV +++L+KVI+W HHKD P K P WD+EFLKVDQ L+E+ILA
Sbjct: 47 LPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRTDDIPVWDQEFLKVDQGTLFELILA 106
Query: 126 ANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAEDR 182
ANYL+IK LLD CK VA MI+G+TPEEIR+TFNI NDFT EEEA +R+EN+W E++
Sbjct: 107 ANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 163
>Hs22046564 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 162
Score = 152 bits (384), Expect = 2e-37
Identities = 82/177 (46%), Positives = 109/177 (61%), Gaps = 18/177 (10%)
Query: 7 NVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMP 66
++ L S +GE F VD +IA++S+ +K L+DL +P
Sbjct: 3 SIQLQSFDGEIFAVDVEIAKQSVTIKTTLEDLGMDDEGDDP-----------------VP 45
Query: 67 VPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDP-WDREFLKVDQEMLYEIILA 125
+PNV ++VL+KVI+W HHKD P K P WD+EFLKV Q L+E+I A
Sbjct: 46 LPNVNAAVLKKVIQWCTHHKDDPPPPEDDENKEKQTDDIPVWDQEFLKVAQGTLFELIRA 105
Query: 126 ANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAEDR 182
ANYL+IK LLD CK VA MI+G+TPEEIR+TFNI NDFT EEEA +R+EN+W E++
Sbjct: 106 ANYLDIKGLLDVTCKTVANMIKGKTPEEIRKTFNIKNDFTEEEEAQVRKENQWCEEK 162
>CE10580 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 176
Score = 138 bits (348), Expect = 4e-33
Identities = 77/179 (43%), Positives = 99/179 (55%), Gaps = 15/179 (8%)
Query: 4 ENQNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXI 63
+ + + + S + E F+V R + S + L DL
Sbjct: 12 KEREIKISSSDNEIFLVPRNVIRLSNTINTLLMDLGLDDEEGTNAEP------------- 58
Query: 64 VMPVPNVRSSVLQKVIEWAVHH-KDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEI 122
+PV NV +S+L+KVI W HH D ++ + WD EFLKVDQ L+E+
Sbjct: 59 -IPVQNVTASILKKVISWCNHHHSDPISTEDSDNREKRTDDIGSWDVEFLKVDQGTLFEL 117
Query: 123 ILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAED 181
ILAANYL+IK LLD CK VA MI+G++PEEIRRTFNI NDFTPEEE IR+EN W ED
Sbjct: 118 ILAANYLDIKGLLDVTCKTVANMIKGKSPEEIRRTFNIKNDFTPEEEEQIRKENAWCED 176
>7290072 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 162
Score = 138 bits (348), Expect = 4e-33
Identities = 75/177 (42%), Positives = 104/177 (58%), Gaps = 18/177 (10%)
Query: 7 NVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMP 66
++ L S + E F D +IA+ S +K L+D ++P
Sbjct: 3 SIKLQSSDEEIFDTDIQIAKCSGTIKTMLEDCGMEDDENA-----------------IVP 45
Query: 67 VPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAP-VDPWDREFLKVDQEMLYEIILA 125
+PNV S++L+KV+ WA +HKD P K + WD +FLKVDQ L+E+ILA
Sbjct: 46 LPNVNSTILRKVLTWAHYHKDDPQPTEDDESKEKRTDDIISWDADFLKVDQGTLFELILA 105
Query: 126 ANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAEDR 182
ANYL+IK LL+ CK VA MI+G+TPEEIR+TFNI DF+P EE +R+ENEW E++
Sbjct: 106 ANYLDIKGLLELTCKTVANMIKGKTPEEIRKTFNIKKDFSPAEEEQVRKENEWCEEK 162
>7303524 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 161
Score = 135 bits (341), Expect = 2e-32
Identities = 73/174 (41%), Positives = 100/174 (56%), Gaps = 19/174 (10%)
Query: 10 LVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMPVPN 69
L S + E F D++IA+ S ++ ++DL V+P+PN
Sbjct: 6 LESADKEIFDTDQEIAKCSETIRIAIEDLGDESDNS------------------VLPLPN 47
Query: 70 VRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAP-VDPWDREFLKVDQEMLYEIILAANY 128
V S +L+KV+ WA +HKD K + WD +FLKVDQ L+E+ILAANY
Sbjct: 48 VNSLILKKVLHWATYHKDDPVVTEEVENKEKRTDDISSWDADFLKVDQGTLFELILAANY 107
Query: 129 LNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAEDR 182
LNI+ LLD CK VA MI+G++P+ IR TF I NDF P+EE +R+ENEW ED+
Sbjct: 108 LNIQGLLDVTCKTVANMIKGKSPQAIRDTFAIQNDFLPQEEEQVRKENEWCEDK 161
>At5g42190 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 171
Score = 134 bits (337), Expect = 7e-32
Identities = 75/188 (39%), Positives = 105/188 (54%), Gaps = 37/188 (19%)
Query: 6 QNVVLVSVEGERFVVDRKIAERSLLLKNYLQD--LNSGXXXXXXXXXXXXXXXXXXXXXI 63
+ + L S +GE F +D +A S +K+ ++D ++G
Sbjct: 5 RKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDNG---------------------- 42
Query: 64 VMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAP------------VDPWDREF 111
+P+PNV S +L KVIE+ H ++ + A + WD EF
Sbjct: 43 -IPLPNVTSKILSKVIEYCKRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEF 101
Query: 112 LKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAA 171
+KVDQ L+++ILAANYLNIK LLD C+ VA+MI+G+TPEEIR+TFNI NDFTPEEE
Sbjct: 102 IKVDQGTLFDLILAANYLNIKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEE 161
Query: 172 IRRENEWA 179
+RREN+WA
Sbjct: 162 VRRENQWA 169
>At1g75950 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 160
Score = 134 bits (336), Expect = 9e-32
Identities = 74/178 (41%), Positives = 104/178 (57%), Gaps = 27/178 (15%)
Query: 6 QNVVLVSVEGERFVVDRKIAERSLLLKNYLQD--LNSGXXXXXXXXXXXXXXXXXXXXXI 63
+ +VL S +GE F V+ +A S + + ++D +++G
Sbjct: 4 KKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDNG---------------------- 41
Query: 64 VMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVD--PWDREFLKVDQEMLYE 121
+P+PNV S +L KVIE+ H ++ + D WD +F+K+DQ L+E
Sbjct: 42 -VPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFE 100
Query: 122 IILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
+ILAANYLNIK LLD C+ VA+MI+G+TPEEIR TFNI NDFTPEEE +RREN+WA
Sbjct: 101 LILAANYLNIKNLLDLTCQTVADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWA 158
>CE10578 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 174
Score = 125 bits (315), Expect = 2e-29
Identities = 68/178 (38%), Positives = 96/178 (53%), Gaps = 15/178 (8%)
Query: 4 ENQNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXI 63
+N+ + + S + E F+V R + S L L DL
Sbjct: 12 KNREIKISSSDDEIFLVPRNVIRLSNTLNTLLVDLGLDDDEGTNAEP------------- 58
Query: 64 VMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEII 123
+PV NV +S+L+KVI W H+ P + + WD++FL +DQ L+E+I
Sbjct: 59 -IPVQNVTASILKKVINWCTKHQSDPIPTEDSEKKTDGS-IQDWDKKFLDIDQGTLFELI 116
Query: 124 LAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAED 181
LAANYL+IK LLD C+ VA MI+G++P+EIRR FNI +DFT EE IR+EN W +D
Sbjct: 117 LAANYLDIKGLLDVACQSVANMIKGKSPDEIRRAFNIKDDFTAEEREQIRKENAWCDD 174
>At4g34210 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 152
Score = 125 bits (315), Expect = 2e-29
Identities = 70/173 (40%), Positives = 100/173 (57%), Gaps = 29/173 (16%)
Query: 8 VVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMPV 67
+VL+S +G+ F V+ +A +S + + ++D +P+
Sbjct: 6 IVLMSSDGQSFEVEEAVAIQSQTIAHMVED---------------------DCVADGIPL 44
Query: 68 PNVRSSVLQKVIEWAV-HHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIILAA 126
NV S +L KVIE+ HH D P + WD +F+ ++Q ++E+ILAA
Sbjct: 45 ANVESKILVKVIEYCKKHHVDEANPISEEDLNN-------WDEKFMDLEQSTIFELILAA 97
Query: 127 NYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
NYLNIK LLD C+ VA+MI+G+TPEEIR TFNI NDFTPEEE A+R+EN+WA
Sbjct: 98 NYLNIKSLLDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWA 150
>At1g20140 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 163
Score = 125 bits (315), Expect = 2e-29
Identities = 70/184 (38%), Positives = 106/184 (57%), Gaps = 28/184 (15%)
Query: 1 MSKENQNVVLVSVEGERFVVDRKIAERSLLLKNYLQD--LNSGXXXXXXXXXXXXXXXXX 58
M++ + ++L S +GE F ++ +A +S +K+ ++D ++G
Sbjct: 1 MAETKKMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADNG----------------- 43
Query: 59 XXXXIVMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDP---WDREFLKVD 115
+P+PNV ++L KVIE+ H ++ +A D WD EF+KVD
Sbjct: 44 ------IPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSAENDELKNWDSEFVKVD 97
Query: 116 QEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRE 175
Q L+++ILAANYLNI LLD CK VA+ +RG+TPE++R FNI ND+TPEEEA +R E
Sbjct: 98 QPTLFDLILAANYLNIGGLLDLTCKAVADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNE 157
Query: 176 NEWA 179
N+WA
Sbjct: 158 NKWA 161
>At4g34470 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 152
Score = 122 bits (307), Expect = 2e-28
Identities = 68/173 (39%), Positives = 100/173 (57%), Gaps = 29/173 (16%)
Query: 8 VVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMPV 67
+VL+S +G+ F V+ +A +S + + ++D +P+
Sbjct: 6 IVLMSSDGQSFEVEEAVAIQSQTIAHMVED---------------------DCVADGIPL 44
Query: 68 PNVRSSVLQKVIEWAV-HHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIILAA 126
NV S +L KVIE+ +H D P ++ WD +F+ ++Q ++E+ILAA
Sbjct: 45 ANVESKILVKVIEYCKKYHVDEANPISEEDLNK-------WDEKFMDLEQSTIFELILAA 97
Query: 127 NYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
NYLNIK L D C+ VA+MI+G+TPEEIR TFNI NDFTPEEE A+R+EN+WA
Sbjct: 98 NYLNIKSLFDLTCQTVADMIKGKTPEEIRSTFNIENDFTPEEEEAVRKENQWA 150
>CE16037 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 167
Score = 121 bits (304), Expect = 5e-28
Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 16/176 (9%)
Query: 6 QNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVM 65
+ + L S + + F V RK+ +S + + +Q+L +
Sbjct: 8 KQIKLTSSDDKTFTVSRKVISQSKTITDIIQNLGIEESGSTSEDT--------------I 53
Query: 66 PVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIILA 125
P+ V S++L+K+I W HH D ++K + WD EF+KVDQ L+EIILA
Sbjct: 54 PLQKVTSTILEKIITWCEHHADDE--PKKVDENKKTVDISEWDAEFMKVDQGTLFEIILA 111
Query: 126 ANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAED 181
ANYL+I+ LLD + VA M++G+TP +IR FNI NDF+ EE A+++EN W ED
Sbjct: 112 ANYLDIRGLLDVTTQNVANMMKGKTPSQIRTLFNIENDFSEEEREAMKKENAWCED 167
>7291582 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 171
Score = 120 bits (302), Expect = 8e-28
Identities = 68/171 (39%), Positives = 97/171 (55%), Gaps = 18/171 (10%)
Query: 8 VVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMPV 67
+ L S +GE F D + A+ S +K L+D ++P+
Sbjct: 4 IKLQSSDGEIFETDIETAKCSSTIKTLLEDCP-----------------VEAENDTLIPL 46
Query: 68 PNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAA-PVDPWDREFLKVDQEMLYEIILAA 126
PNV S++L+KV+ WA HH++ ++ A + PWD EFL +DQ L+E+ILAA
Sbjct: 47 PNVNSTILKKVLIWAKHHREDIAEENEEEAAKSVAVQITPWDAEFLSMDQGTLFELILAA 106
Query: 127 NYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENE 177
NYL+I LL+A C VA MI+GRT EEIR+TF+I NDF+P EE + E+E
Sbjct: 107 NYLDIPNLLNAACMTVANMIKGRTTEEIRQTFHITNDFSPSEEDLMTMESE 157
>At2g25700 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 163
Score = 118 bits (295), Expect = 5e-27
Identities = 65/184 (35%), Positives = 102/184 (55%), Gaps = 28/184 (15%)
Query: 1 MSKENQNVVLVSVEGERFVVDRKIAERSLLLKNYLQD--LNSGXXXXXXXXXXXXXXXXX 58
M++ + ++L S +GE F V+ +A S +K+ ++D +++G
Sbjct: 1 MAETKKMIILKSSDGESFEVEEAVAVESQTIKHMIEDDCVDNG----------------- 43
Query: 59 XXXXIVMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXX---SRKAAPVDPWDREFLKVD 115
+P+PNV ++L KVIE+ H ++ S + + WD +F+KVD
Sbjct: 44 ------IPLPNVTGAILAKVIEYCKKHVEAAAEAGGDKDFYGSTENHELKTWDNDFVKVD 97
Query: 116 QEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRE 175
L++++ AANYLNI LLD CK VA+ +RG+TP ++R FNI ND+TPEEEA +R E
Sbjct: 98 HPTLFDLLRAANYLNISGLLDLTCKAVADQMRGKTPAQMREHFNIKNDYTPEEEAEVRNE 157
Query: 176 NEWA 179
N WA
Sbjct: 158 NRWA 161
>At3g21850 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 153
Score = 116 bits (290), Expect = 2e-26
Identities = 58/116 (50%), Positives = 76/116 (65%), Gaps = 8/116 (6%)
Query: 65 MPVPNVRSSVLQKVIEWA-VHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEII 123
+P+PNV +L VIE+ HH D+ P + WD+EF++ D ++++I
Sbjct: 43 IPLPNVTGKILAMVIEYCNKHHVDAANPCSDDDLKK-------WDKEFMEKDTSTIFDLI 95
Query: 124 LAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
AANYLNIK L D C+ VAE+I+G TPE+IR FNI ND TPEEEAAIRREN+WA
Sbjct: 96 KAANYLNIKSLFDLACQTVAEIIKGNTPEQIREFFNIENDLTPEEEAAIRRENKWA 151
>At1g10230 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 183
Score = 114 bits (284), Expect = 1e-25
Identities = 63/179 (35%), Positives = 97/179 (53%), Gaps = 24/179 (13%)
Query: 1 MSKENQNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXX 60
++ + ++L S +GE F +D +A + L++ + ++D +G
Sbjct: 24 LTMSSNKILLTSSDGESFEIDEAVARKFLIIVHMMEDNCAGEA----------------- 66
Query: 61 XXIVMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFL-KVDQEML 119
+P+ NV +L K+IE+A H N P +D WD +F+ K+D E +
Sbjct: 67 ----IPLENVTGDILSKIIEYAKMHV--NEPSEEDEDEEAKKNLDSWDAKFMEKLDLETI 120
Query: 120 YEIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEW 178
++IILAANYLN + LL + VA+ I+ +TPEE+R FNI NDFTPEEE IR+EN W
Sbjct: 121 FKIILAANYLNFEGLLGFASQTVADYIKDKTPEEVREIFNIENDFTPEEEEEIRKENAW 179
>At3g60010 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 154
Score = 112 bits (281), Expect = 2e-25
Identities = 67/176 (38%), Positives = 97/176 (55%), Gaps = 32/176 (18%)
Query: 8 VVLVSVEGERFVVDRKIAERSLLLKNYLQD--LNSGXXXXXXXXXXXXXXXXXXXXXIVM 65
V+L+S +GE F V+ +A +S + + ++D + +G +
Sbjct: 5 VMLLSSDGESFQVEEAVAVQSQTIAHMIEDDCVANG-----------------------V 41
Query: 66 PVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEM--LYEII 123
P+ NV +L KVIE+ H S+ P K WD EF+K ++ L++++
Sbjct: 42 PIANVTGVILSKVIEYCKKHVVSDSPTEESKDELKK-----WDAEFMKALEQSSTLFDVM 96
Query: 124 LAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
LAANYLNIK LLD GC+ VA+MI G+ P+EIR I NDFTPEEE IR+EN+WA
Sbjct: 97 LAANYLNIKDLLDLGCQTVADMITGKKPDEIRALLGIENDFTPEEEEEIRKENQWA 152
>At3g25650 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 177
Score = 109 bits (273), Expect = 2e-24
Identities = 66/187 (35%), Positives = 99/187 (52%), Gaps = 36/187 (19%)
Query: 5 NQNVVLVSVEGERFVVDRKIAERSLLLKNYLQD---LNSGXXXXXXXXXXXXXXXXXXXX 61
+ +VL S +GE F V+ +A + ++K+ L+D +N
Sbjct: 3 SNKIVLTSSDGESFQVEEVVARKLQIVKHLLEDDCVINE--------------------- 41
Query: 62 XIVMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAP-------VDPWDREFLK- 113
+P+ NV ++L V+E+ H D +K P +D WD EF+K
Sbjct: 42 ---IPLQNVTGNILSIVLEYCKKHVDDVVDDDASEEPKKKKPDDEAKQNLDAWDAEFMKN 98
Query: 114 VDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFT-PEEEAAI 172
+D E ++++ILAANYLN++ LL C+ VA+ I+ +TPEE+R FNI NDFT EEE AI
Sbjct: 99 IDMETIFKLILAANYLNVEGLLGLTCQTVADYIKDKTPEEVRELFNIENDFTHEEEEEAI 158
Query: 173 RRENEWA 179
R+EN WA
Sbjct: 159 RKENAWA 165
>At2g03170 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 149
Score = 108 bits (270), Expect = 4e-24
Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 32/176 (18%)
Query: 5 NQNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIV 64
+ +VL S +GE F V+ +A + ++++ ++D
Sbjct: 3 SNKIVLSSSDGESFEVEEAVARKLKIVEHMIED---------------------DCVVTE 41
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFL-KVDQEMLYEII 123
+P+ NV +L V+E+ H ++ WD EF+ K DQ +++++
Sbjct: 42 VPLQNVTGKILSIVVEYCKKH----------VVDEESDEFKTWDEEFMKKFDQPTVFQLL 91
Query: 124 LAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
LAANYLNIK LLD + VA+ I+ +TPEEIR FNI NDFTPEEEAA+R+EN WA
Sbjct: 92 LAANYLNIKGLLDLSAQTVADRIKDKTPEEIREIFNIENDFTPEEEAAVRKENAWA 147
>7293650 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 158
Score = 105 bits (262), Expect = 3e-23
Identities = 51/102 (50%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Query: 64 VMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVD--PWDREFLKVDQEMLYE 121
V+P+P V + +L K++ WA HHKD + +P D PWD F+ VDQ +L+E
Sbjct: 45 VVPLPKVNAFILNKILTWAYHHKDDDDQAAEGEELTPQSPHDISPWDANFINVDQPILFE 104
Query: 122 IILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVND 163
I +AANYL IK L D CK +A MIRG+TPEEIR+TFNI +D
Sbjct: 105 ITVAANYLEIKGLEDLCCKTLANMIRGKTPEEIRQTFNIEDD 146
>CE24523 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 159
Score = 103 bits (258), Expect = 1e-22
Identities = 58/178 (32%), Positives = 92/178 (51%), Gaps = 28/178 (15%)
Query: 6 QNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVM 65
+ + L+S + + F V RK+ +S + + + +
Sbjct: 8 KQIKLISSDDKTFTVSRKVISQSKTISGFTSE-------------------------DTI 42
Query: 66 PVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXX--SRKAAPVDPWDREFLKVDQEMLYEII 123
P+P V S++L+K+I W HH D ++K + WD EF+KVDQ L+EII
Sbjct: 43 PLPKVTSAILEKIITWCEHHADDEPKKVEKIEKGNKKTVEISEWDAEFMKVDQGTLFEII 102
Query: 124 LAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAED 181
LAANYL+I+ LL+ + VA M++G+TP ++R F I N F+ EE A+++ N W ED
Sbjct: 103 LAANYLDIRGLLEVTTQNVANMMKGKTPSQVRTLFKIDN-FSEEELEAMKKGNAWCED 159
>At3g21860 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 152
Score = 103 bits (257), Expect = 1e-22
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 8/115 (6%)
Query: 65 MPVPNVRSSVLQKVIEWA-VHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEII 123
+P+P V +L+ VIE+ HH D+ P + WD+EF++ Q ++++I
Sbjct: 42 IPLPEVTGKILEMVIEYCNKHHVDAANPCSDEDLKK-------WDKEFMEKYQSTIFDLI 94
Query: 124 LAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEW 178
+AANYLNIK LLD C+ VA+MI+ T E R+ FNI ND+T EEE A+RREN+W
Sbjct: 95 MAANYLNIKSLLDLACQTVADMIKDNTVEHTRKFFNIENDYTHEEEEAVRRENQW 149
>7293651 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 145
Score = 102 bits (255), Expect = 2e-22
Identities = 50/102 (49%), Positives = 65/102 (63%), Gaps = 2/102 (1%)
Query: 64 VMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVD--PWDREFLKVDQEMLYE 121
++P+P V + +L K++ W HHKD + +P D WD F+ VDQ L+E
Sbjct: 32 IVPLPKVNAFILSKILTWIYHHKDDDAHGAEGVELSPQSPHDISAWDANFINVDQPTLFE 91
Query: 122 IILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVND 163
IILAANYL IK L+D CK VA MIRG+TPEEIR TFNI ++
Sbjct: 92 IILAANYLEIKGLVDLCCKTVANMIRGKTPEEIRHTFNIPDE 133
>At3g60020 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 153
Score = 99.8 bits (247), Expect = 2e-21
Identities = 58/178 (32%), Positives = 96/178 (53%), Gaps = 37/178 (20%)
Query: 8 VVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMPV 67
++L S +G+ F +D +A +S+ + + ++D V+P+
Sbjct: 5 IMLKSSDGKSFEIDEDVARKSIAINHMVED---------------------GCATDVIPL 43
Query: 68 PNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLK-VDQEMLYEIILAA 126
NV S +L+ VI++ H S++ + WD +F+K ++ +L+++++AA
Sbjct: 44 RNVTSKILKIVIDYCEKH----------VKSKEEEDLKEWDADFMKTIETTILFDVMMAA 93
Query: 127 NYLNIKPLLDAGCKVV-----AEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
NYLNI+ LLD CK V A+++ G+TP+EIR FNI ND T EE A IR EN+WA
Sbjct: 94 NYLNIQSLLDLTCKTVSDLLQADLLSGKTPDEIRAHFNIENDLTAEEVAKIREENQWA 151
>CE20827 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 145
Score = 98.6 bits (244), Expect = 4e-21
Identities = 58/167 (34%), Positives = 88/167 (51%), Gaps = 22/167 (13%)
Query: 1 MSKENQNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXX 60
MS E Q+V +V+ + F+V KIA +S LL +++ LN
Sbjct: 1 MSSEEQDVKIVTSDDVEFIVSPKIANQSKLLADFVV-LNQREP----------------- 42
Query: 61 XXIVMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLY 120
+P+ NV S + +KVIEW +H + ++ + WD EFLKVD+ L+
Sbjct: 43 ----IPLKNVTSEIFKKVIEWCEYHAEDIPKPPDNVEEKRTDDIGEWDVEFLKVDKGTLF 98
Query: 121 EIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPE 167
E++LAA YL+IK L + CK +A I+G++PEEIR FN+ N+ E
Sbjct: 99 ELVLAATYLDIKGLFNVTCKSIANSIKGKSPEEIRAVFNLGNETNME 145
>At2g03160 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 200
Score = 97.1 bits (240), Expect = 1e-20
Identities = 62/206 (30%), Positives = 94/206 (45%), Gaps = 53/206 (25%)
Query: 5 NQNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIV 64
++ +VL S +GE F V+ +A + ++ + ++D
Sbjct: 3 SKKIVLTSSDGESFKVEEVVARKLQIVGHIIED---------------------DCATNK 41
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSR------------------------- 99
+P+PNV +L KVIE+ H + + S
Sbjct: 42 IPIPNVTGEILAKVIEYCKKHVEDDDDVVETHESSTKGDKTVEEAKKKPDDVAVPESTEG 101
Query: 100 ------KAAPVDPWDREFLK-VDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRTPE 152
K ++ WD +F+K D + +++IILAANYLN++ L D K +A+ I+ TPE
Sbjct: 102 DDEAEDKKEKLNEWDAKFMKDFDIKTIFDIILAANYLNVQGLFDLCSKTIADYIKDMTPE 161
Query: 153 EIRRTFNIVNDFTPEEEAAIRRENEW 178
E+R FNI NDFTPEEE AIR EN W
Sbjct: 162 EVRELFNIENDFTPEEEEAIRNENAW 187
>Hs18580689_1 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 127
Score = 96.3 bits (238), Expect = 2e-20
Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 17/140 (12%)
Query: 7 NVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMP 66
++ L S GE F VD +I ++S+ +K L+DL +P
Sbjct: 3 SIKLQSSGGEIFEVDVEIVKQSVTIKTMLEDLGMNDEGDHDP----------------VP 46
Query: 67 VPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDP-WDREFLKVDQEMLYEIILA 125
+PNV +++L+KVI+W HH+D + P K P WD+EFLKVDQ L+E+ILA
Sbjct: 47 LPNVNAAILKKVIQWCTHHEDDSPPPKVYENKEKRTDDIPVWDQEFLKVDQGTLFELILA 106
Query: 126 ANYLNIKPLLDAGCKVVAEM 145
ANYL+IK LLD CK VA M
Sbjct: 107 ANYLDIKGLLDVTCKTVANM 126
>At3g21830 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 152
Score = 95.9 bits (237), Expect = 3e-20
Identities = 51/117 (43%), Positives = 74/117 (62%), Gaps = 8/117 (6%)
Query: 64 VMPVPNVRSSVLQKVIEWA-VHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEI 122
V+ V + S +L+ VIE+ HH D+ P ++ WD+EF++ D+ ++ +
Sbjct: 41 VILVLKMTSEILEMVIEYCNKHHVDAANPCSDDD-------LEKWDKEFMEKDKSTIFAL 93
Query: 123 ILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
AAN+LN K LL + VA+MI+G TP+++R FNI ND TPEEEAAIRREN+WA
Sbjct: 94 TNAANFLNNKSLLHLAGQTVADMIKGNTPKQMREFFNIENDLTPEEEAAIRRENKWA 150
>At2g03190 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 170
Score = 95.1 bits (235), Expect = 5e-20
Identities = 58/184 (31%), Positives = 88/184 (47%), Gaps = 30/184 (16%)
Query: 5 NQNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIV 64
+ +VL S + E F V+ +A + ++ + + D
Sbjct: 3 SNKIVLTSSDDESFEVEEAVARKLKVIAHMIDD---------------------DCADKA 41
Query: 65 MPVPNVRSSVLQKVIEWAVHH--------KDSNFPXXXXXXSRKAAPVDPWDREFLK-VD 115
+P+ NV ++L VIE+ H DS + WD EF+K D
Sbjct: 42 IPLENVTGNILALVIEYCKKHVLDDVDDSDDSTEATSENVNEEAKNELRTWDAEFMKEFD 101
Query: 116 QEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRE 175
E + ++ILA NYLN++ LL C+ VA+ ++ +PEE+R FNI ND+TPEEE AIR+E
Sbjct: 102 METVMKLILAVNYLNVQDLLGLTCQTVADHMKDMSPEEVRELFNIENDYTPEEEDAIRKE 161
Query: 176 NEWA 179
N WA
Sbjct: 162 NAWA 165
>Hs22044197_2 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 152
Score = 93.6 bits (231), Expect = 1e-19
Identities = 60/178 (33%), Positives = 91/178 (50%), Gaps = 31/178 (17%)
Query: 7 NVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMP 66
++ L+S +GE F VD +IA++S+ LK L++L +P
Sbjct: 2 SIKLLSSDGELFEVDVEIAKQSVTLKIMLENLGMDDGDNDP-----------------VP 44
Query: 67 VPNVRSSVLQKVIEWAVHHKDSNFP--XXXXXXSRKAAPVDPWDREFLKVDQEMLYEIIL 124
+PN W + KD+ P ++ + WD++FLK+D L+E+IL
Sbjct: 45 LPN-----------WCTNQKDNPPPPPEADENEEKRTDAIPAWDQKFLKIDPGTLFEVIL 93
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEI-RRTFNIVNDFTPEEEAAIRRENEWAED 181
AANYL+IK LLD CK VA +I+G+ PEEI ++ T EEA I +EN+W E+
Sbjct: 94 AANYLDIKGLLDVPCKTVAYLIKGKAPEEICTNRLPLIPKLTLLEEAQIPKENQWCEE 151
>CE17593 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 194
Score = 90.5 bits (223), Expect = 1e-18
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIIL 124
+P+ NV ++L+ VIEW HK P K V WD FLK+D E+L+++I+
Sbjct: 64 IPITNVTGNILKMVIEWCEKHKGEALPVEDDSVP-KNINVPEWDTNFLKIDNEVLFDLIV 122
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAE 180
A NYL++ L++ GCK+VA M G++P+E+R F I D E+EAA R E AE
Sbjct: 123 ACNYLDVPGLMNYGCKMVANMAIGKSPDELRIIFAIPTD--EEDEAAERAAKEKAE 176
>CE24062 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 192
Score = 90.1 bits (222), Expect = 1e-18
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 3/116 (2%)
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIIL 124
+P+ NV ++L+ VIEW HK P K V WD FLK+D E+L+++I+
Sbjct: 62 IPITNVTGNILKMVIEWCEKHKGEALPVDDDSVP-KHITVPEWDTNFLKIDNEVLFDLIV 120
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAE 180
A NYL++ L++ GCK+VA M G++P+E+R F I D E+EAA R E AE
Sbjct: 121 ACNYLDVPGLMNYGCKMVAMMAIGKSPDELRIIFAIPTD--EEDEAAERAAKEKAE 174
>CE17591 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 194
Score = 89.0 bits (219), Expect = 3e-18
Identities = 47/116 (40%), Positives = 69/116 (58%), Gaps = 3/116 (2%)
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIIL 124
+P+ NV ++L+ VIEW HK P K V WD FLK+D ++L+++I+
Sbjct: 64 IPITNVIGNILKMVIEWCEKHKGEALPVEDDSVP-KHVNVPEWDTNFLKIDNDVLFDLIV 122
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAE 180
A NYL++ L++ GCK+VA M G++P+E+R F I D E+EAA R E AE
Sbjct: 123 ACNYLDVPGLMNYGCKIVAMMAIGKSPDELRIIFAIPTD--EEDEAAERAAKEKAE 176
>7293652 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 167
Score = 89.0 bits (219), Expect = 3e-18
Identities = 48/112 (42%), Positives = 64/112 (56%), Gaps = 2/112 (1%)
Query: 64 VMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAP--VDPWDREFLKVDQEMLYE 121
++P+ +V + L K++ WA HHKD + + P + PWD FL V+ L E
Sbjct: 45 IVPLHSVSTFTLGKILAWANHHKDDDDQSTEGEELKPRRPYAISPWDAIFLMVNSTTLLE 104
Query: 122 IILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIR 173
IILAA L IK LL+ VVA MIRG+TPEEIR FNI D +P + +R
Sbjct: 105 IILAAKQLQIKGLLELTYNVVANMIRGKTPEEIRFIFNIPEDVSPSVDGELR 156
>CE22054 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 194
Score = 84.3 bits (207), Expect = 8e-17
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIIL 124
+P+ NV ++++ VIEW HK P + V WD FLK+D ++L+++I+
Sbjct: 64 IPITNVTGNIMKMVIEWCEKHKGETLPVEDDSVPKNIT-VPEWDTNFLKIDNDVLFDLIV 122
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAE 180
A+N+L++ L+ CK+VA M G++P+E+R F I D E+EAA + E AE
Sbjct: 123 ASNFLDVPGLMSYACKMVANMAIGKSPDEMRVLFAIPTD--EEDEAAEKAAKEKAE 176
>CE17590 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 172
Score = 82.0 bits (201), Expect = 4e-16
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIIL 124
+PV NV + KV EW HK P K + WD++FLK++ E L+++IL
Sbjct: 58 IPVTNVNGKTMAKVAEWCEKHKADAIPEDNMNVL-KTLTIPEWDQKFLKIEDEALFDLIL 116
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAA 171
A+N+L+IK L+ GCK V+ M +G+T E+R F I D E++AA
Sbjct: 117 ASNFLDIKGLMYFGCKTVSNMAKGKTTAELREIFGINTD---EQDAA 160
>CE22057 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 197
Score = 81.3 bits (199), Expect = 7e-16
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 4/107 (3%)
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIIL 124
+PV NV ++KV EW H P K + WD++FLK++ E L+++IL
Sbjct: 87 IPVTNVNGKTMEKVAEWCEKHNADAIPEDNMNVL-KTLTIPEWDQKFLKIEDEALFDLIL 145
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAA 171
A+N+L+IK L+ GCK V+ M +G+T E+R F I D E++AA
Sbjct: 146 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTD---EQDAA 189
>CE15814 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 195
Score = 81.3 bits (199), Expect = 7e-16
Identities = 47/173 (27%), Positives = 84/173 (48%), Gaps = 19/173 (10%)
Query: 10 LVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMPVPN 69
LVS + + F + K A++S++L + + +PV
Sbjct: 25 LVSEDKQEFTISAKAAKKSIVLNDVIS----------------RRAPEDSAPMAPIPVEK 68
Query: 70 VRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVD--PWDREFLKVDQEMLYEIILAAN 127
V +L VI+W K+ P +K +D WD +FLK+ ++L+++I+A N
Sbjct: 69 VTGDILNMVIKWCEQRKEDELPVDDGSIPKKIDKIDVPQWDADFLKISSDVLFDLIVACN 128
Query: 128 YLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAE 180
L++ L++ GCK+VA+M G++PE++R + I D + +AA + E AE
Sbjct: 129 ELDVPGLMNYGCKMVADMAAGKSPEDMRTIYGIPTD-KQDADAAEKAAKEEAE 180
>CE17592 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 172
Score = 77.0 bits (188), Expect = 1e-14
Identities = 41/107 (38%), Positives = 61/107 (56%), Gaps = 4/107 (3%)
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIIL 124
+PV NV + KV E HK P K + WD++FLK++ E L+++IL
Sbjct: 58 IPVTNVNGKTMAKVAELCEKHKADAIPEDNMNVL-KTLTIPEWDQKFLKIEDEALFDLIL 116
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAA 171
A+N+L+IK L+ GCK V+ M +G+T E+R F I D E++AA
Sbjct: 117 ASNFLDIKGLMYYGCKTVSNMAKGKTTAELREIFGINTD---EQDAA 160
>CE19090 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 199
Score = 72.0 bits (175), Expect = 4e-13
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 12/115 (10%)
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIIL 124
+P+ V + + +K+IE+ H+ + P + WD EFLK+DQ L++++L
Sbjct: 97 IPLTKVDAKIFEKIIEYC-EHQGTPRPLLN-------GEIGEWDSEFLKLDQNTLFDLVL 148
Query: 125 AANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
AANYLNI+ L D + +A M++ TP +IR F + N + E+ R + W+
Sbjct: 149 AANYLNIENLFDVTTQFIANMMKNNTPSQIRARFGVSNKHSSAED----RSDNWS 199
>At2g20160 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 150
Score = 72.0 bits (175), Expect = 4e-13
Identities = 47/176 (26%), Positives = 81/176 (45%), Gaps = 31/176 (17%)
Query: 5 NQNVVLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIV 64
++ +VL S + E F +D +A + ++ + + D
Sbjct: 3 SKKIVLTSSDDECFEIDEAVARKMQMVAHMIDD---------------------DCADKA 41
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLK-VDQEMLYEII 123
+ + NV +L +IE+ H D WD EF+K +D + L++++
Sbjct: 42 IRLQNVTGKILAIIIEYCKKHVDDVEAKNEFVT---------WDAEFVKNIDMDTLFKLL 92
Query: 124 LAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWA 179
AA+YL + L + + +A+ +T EIR FNI ND+TPEEE +R++NEWA
Sbjct: 93 DAADYLIVIGLKNLIAQAIADYTADKTVNEIRELFNIENDYTPEEEEELRKKNEWA 148
>CE06317 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 173
Score = 71.6 bits (174), Expect = 5e-13
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
Query: 72 SSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIILAANYLNI 131
SS++Q VIEW H++D+ P + WD++F V+ +L+ ++ A++ L +
Sbjct: 59 SSIVQAVIEWLYHYQDN--PLARRDSKIRYHDFSEWDKQFFNVESGVLFALLNASHALGV 116
Query: 132 KPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEA 170
+ L++ GC AE+IRG++ EEIR+ + I +D EEA
Sbjct: 117 EDLMNMGCAAAAELIRGKSTEEIRKIYGIRSDEEQMEEA 155
>CE19451 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 184
Score = 68.2 bits (165), Expect = 6e-12
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 5/118 (4%)
Query: 63 IVMPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEI 122
+ +P+ V L+ V+EW HHK P + PV WDR+F+ ++ + L ++
Sbjct: 62 VPIPIEKVNGKTLKLVVEWCEHHKADPVPEAYPSGNT-VLPV--WDRKFVDIEHDALTDL 118
Query: 123 ILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAIRRENEWAE 180
+ A+N+L + LL CK +A + +G +PEE+R F I D E+E A R E E
Sbjct: 119 VNASNFLEVMTLLTYCCKFIAGLAKGMSPEEMRVFFCIPTD--EEDEKAERFGKEKTE 174
>CE02455 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 180
Score = 64.7 bits (156), Expect = 7e-11
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 65 MPVPNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFL-KVDQEMLYEII 123
+PV NV L+ +IEW HK+ + +K + WDR FL ++ L+++I
Sbjct: 68 VPVNNVVGFTLKLLIEWCDKHKEDDPAIALAEKDKKNICIPSWDRHFLSRLPMSNLFDLI 127
Query: 124 LAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNI 160
AA +L++ L++ GCK VA +G+ EE+R F I
Sbjct: 128 TAAYHLDVTGLINYGCKTVANSAKGKNAEEMRELFGI 164
>CE04194 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 339
Score = 63.5 bits (153), Expect = 1e-10
Identities = 45/165 (27%), Positives = 75/165 (45%), Gaps = 27/165 (16%)
Query: 9 VLVSVEGERFVVDRKIAERSLLLKNYLQDLNSGXXXXXXXXXXXXXXXXXXXXXIVMPVP 68
+L+S +GE+F D S +L + L + + V
Sbjct: 191 ILISSDGEKFQTDGHCIRHSKVLMQASKSLETPDTP--------------------IQVE 230
Query: 69 NVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLK-VDQEMLYEIILAAN 127
V+ L +V+EW +H+D S + + WD +LK +D + L ++I A+N
Sbjct: 231 KVQGDTLNRVLEWCNNHRDDGKYVSQCGPSLR---LPQWDFRWLKDLDNQELVDLINASN 287
Query: 128 YLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEEAAI 172
L ++ L+D CK VA M +G+ P ++R F I+ D EEEA +
Sbjct: 288 DLQMQQLMDYACKTVANMAKGKNPAQLRELFGILTD---EEEAEL 329
>At2g45950 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 300
Score = 57.0 bits (136), Expect = 1e-08
Identities = 25/63 (39%), Positives = 42/63 (65%)
Query: 107 WDREFLKVDQEMLYEIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTP 166
+D F+++D + L E+ AA+ L +KPL+D + +A +I G+ PEEIR F++ +D T
Sbjct: 92 YDERFIRMDTKRLCELTSAADSLQLKPLVDLTSRALARIIEGKNPEEIREIFHLPDDLTE 151
Query: 167 EEE 169
EE+
Sbjct: 152 EEK 154
>At3g21840 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 125
Score = 50.8 bits (120), Expect = 1e-06
Identities = 30/84 (35%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 64 VMPVPNVRSSVLQKVIEWA-VHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEI 122
V+PV NV S +L+ VIE+ HH D+ P + WD+EF++ DQ ++ +
Sbjct: 41 VIPVSNVTSEILEMVIEYCNKHHVDAANPCSDEDLKK-------WDKEFMEKDQYTIFHL 93
Query: 123 ILAANYLNIKPLLDAGCKVVAEMI 146
+ AA L+IK LL + VA+M+
Sbjct: 94 MNAAYDLHIKSLLALAYQTVADMV 117
>CE06159 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 176
Score = 50.4 bits (119), Expect = 1e-06
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 11/110 (10%)
Query: 63 IVMPVP---NVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEML 119
+V P P ++ S VL K+IEW HH++ + + WD +F++ + +L
Sbjct: 43 LVQPHPLKTSICSFVLVKIIEWCYHHRNED-------QDHAQRILTAWDVQFIRTNSAIL 95
Query: 120 YEIILAANYLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEEE 169
+ AA L I LLD C+ V+ M+ GRT E++ + +P +E
Sbjct: 96 LHLAEAAFRLEIVGLLDVACRAVSIML-GRTLNEVKLMLRVGGVESPSDE 144
>CE03568 [O] KOG1724 SCF ubiquitin ligase Skp1 component
Length = 182
Score = 48.5 bits (114), Expect = 5e-06
Identities = 46/161 (28%), Positives = 70/161 (42%), Gaps = 29/161 (18%)
Query: 10 LVSVEGERFVVDRKIAERSLLLKNYLQDL--NSGXXXXXXXXXXXXXXXXXXXXXIVMPV 67
L S +G+RF+ DR R++ + ++DL N+G I + +
Sbjct: 12 LRSTDGQRFLADR----RTIGMIGRIEDLFRNAGLDLIPADQLQP----------IQLEI 57
Query: 68 PNVRSSVLQKVIEWAVHHKDSNFPXXXXXXSRKAAPVDPWDREFLKVDQEMLYEIILAAN 127
P ++V++KVIEW HHK + + WD FL V ML++II AA
Sbjct: 58 P---ATVMRKVIEWCDHHKHDP---PYDESEPETNDIPDWDASFLMVRHNMLFDIIRAAR 111
Query: 128 YLNIKPLLDAGCKVVAEMIRGRTPEEIRRTFNIVNDFTPEE 168
+ L C+VV G+ P EI +VND E+
Sbjct: 112 DFTVPGLFAMCCRVV-----GQNPREI--IDGLVNDEEEEQ 145
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.318 0.135 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,115,439
Number of Sequences: 60738
Number of extensions: 303065
Number of successful extensions: 758
Number of sequences better than 1.0e-05: 51
Number of HSP's better than 0.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 657
Number of HSP's gapped (non-prelim): 56
length of query: 182
length of database: 30,389,216
effective HSP length: 100
effective length of query: 82
effective length of database: 24,315,416
effective search space: 1993864112
effective search space used: 1993864112
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)