ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV4657 good O KOG0530 Posttranslational modification, protein turnover, chaperones Protein farnesyltransferase, alpha subunit/protein geranylgeranyltransferase type I, alpha subunit
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV4657 1604192 1605130 313
(313 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKL019w [O] KOG0530 Protein farnesyltransferase alpha subunit/pr... 316 2e-86
SPAPB1A10.04c [O] KOG0530 Protein farnesyltransferase alpha subu... 169 6e-42
Hs4503771 [O] KOG0530 Protein farnesyltransferase alpha subunit/... 166 5e-41
7295671 [O] KOG0530 Protein farnesyltransferase alpha subunit/pr... 144 2e-34
At3g59380 [O] KOG0530 Protein farnesyltransferase alpha subunit/... 127 2e-29
CE18099 [O] KOG0530 Protein farnesyltransferase alpha subunit/pr... 125 1e-28
YJL031c [O] KOG0529 Protein geranylgeranyltransferase type II al... 87 4e-17
CE19541 [O] KOG0529 Protein geranylgeranyltransferase type II al... 81 2e-15
Hs4759016 [O] KOG0529 Protein geranylgeranyltransferase type II ... 80 3e-15
SPCC1620.05 [O] KOG0529 Protein geranylgeranyltransferase type I... 69 9e-12
At4g24490 [O] KOG0529 Protein geranylgeranyltransferase type II ... 68 1e-11
7296795 [O] KOG0529 Protein geranylgeranyltransferase type II al... 65 2e-10
At5g41820 [O] KOG0529 Protein geranylgeranyltransferase type II ... 62 8e-10
>YKL019w [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 316
Score = 316 bits (810), Expect = 2e-86
Identities = 160/316 (50%), Positives = 209/316 (65%), Gaps = 6/316 (1%)
Query: 1 MDKCDYSDVKRIPIESGLENELCAILYTDQYKELVSLFVALLQQNELSERAMAVTAAVIE 60
M++ DYSDVK +PIE+ L++ELC I+YT+ YK L+ L AL+ NELS RA+ +TA +I+
Sbjct: 1 MEEYDYSDVKPLPIETDLQDELCRIMYTEDYKRLMGLARALISLNELSPRALQLTAEIID 60
Query: 61 TVPALYTAWNYRFEICMSLFRKED--VSAWEKELDWLDEFTLNNPKNYQIWSYRQALLSE 118
PA YT WNYRF I + + + V KELDWLDE TLNNPKNYQIWSYRQ+LL
Sbjct: 61 VAPAFYTIWNYRFNIVRHMMSESEDTVLYLNKELDWLDEVTLNNPKNYQIWSYRQSLLKL 120
Query: 119 HPSPKLVRDLPILDVMIDDDTKNYHVWSYRKWSVQFFKDWSHELDFVNKYIDRDVYNNSA 178
HPSP R+LPIL +MIDDD+KNYHVWSYRKW FF D+ HEL + + I+ D+YNNSA
Sbjct: 121 HPSPSFKRELPILKLMIDDDSKNYHVWSYRKWCCLFFSDFQHELAYASDLIETDIYNNSA 180
Query: 179 WTHRAFYLKNVDHVQEEGVAEVEIQYCMDKILLAPQNVSPWNHLRFIYKSFKNN-EYDSK 237
WTHR FY N V + E+Q+ MDKI L PQN+SPW +LR + F + ++DSK
Sbjct: 181 WTHRMFYWVNAKDVISKVELADELQFIMDKIQLVPQNISPWTYLRGFQELFHDRLQWDSK 240
Query: 238 LINFASSFIDNALETYTDQEERPISHVKSSFALELLADVYSQTDSEKSKI--AYQALADT 295
+++FA++FI + L E + ++SS+ALE LA + + AY LA
Sbjct: 241 VVDFATTFIGDVLSLPIGSPE-DLPEIESSYALEFLAYHWGADPCTRDNAVKAYSLLAIK 299
Query: 296 WDPIRKNYWNLKIRQL 311
+DPIRKN W+ KI L
Sbjct: 300 YDPIRKNLWHHKINNL 315
>SPAPB1A10.04c [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 294
Score = 169 bits (427), Expect = 6e-42
Identities = 108/304 (35%), Positives = 155/304 (50%), Gaps = 30/304 (9%)
Query: 1 MDKCDYSDVKRIPIESGLENELCAILYTDQYKELVSLFVALLQQNELSERAMAVTAAVIE 60
+D +Y + IP + G EN L I YT Y++ ++ F A++ + E S RA+ +T +I
Sbjct: 12 LDFTEYGPLTPIPQDDG-ENPLAKICYTTGYEQGMAYFRAIMAKKEYSLRALNLTGFLIM 70
Query: 61 TVPALYTAWNYRFEICMSLFRKEDVSAWEKELDWLDEFTLNNPKNYQIWSYRQALLSEHP 120
PA YT W YRF+I S + EL+WLDE + KNYQ+W +RQ +LS
Sbjct: 71 NNPAHYTVWAYRFQIL-----NHTPSYIDNELEWLDEIAEDFQKNYQVWHHRQKILSL-- 123
Query: 121 SPKLVRDLPILDVMIDDDTKNYHVWSYRKWSVQFFKDWSHELDFVNKYIDRDVYNNSAWT 180
+ R+L M + D+KNYHVWSYR W +Q F D+S EL N+ +++D+YNNSAW
Sbjct: 124 TKNYERELEFTKKMFEIDSKNYHVWSYRVWILQNFNDYSQELKLTNELLEKDIYNNSAWN 183
Query: 181 HRAFYLKNVDHVQEEGVAEVEIQYCMDKILLAPQNVSPWNHLRFIYKSFKNNEYDSKLIN 240
HR + L V + E E+ Y DKIL AP N S WN+L + ++ D+ + N
Sbjct: 184 HRFYVLFETSKVVSWSLEE-ELNYLKDKILFAPDNQSAWNYLCGVLDKSGPSKLDNLIAN 242
Query: 241 FASSFIDNALETYTDQEERPISHVKSSFALELLADVYSQTDSEKSKIAYQALADTWDPIR 300
++ P H LE LA +Y + SE+ YQ LA+ D
Sbjct: 243 L--------------RKNLPALHKP---LLEFLA-MYEPSSSEE---IYQKLANEVDVPH 281
Query: 301 KNYW 304
W
Sbjct: 282 AALW 285
>Hs4503771 [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 379
Score = 166 bits (419), Expect = 5e-41
Identities = 97/316 (30%), Positives = 161/316 (50%), Gaps = 26/316 (8%)
Query: 2 DKCDYSDVKRIPIESGLENELCAILYTDQYKELVSLFVALLQQNELSERAMAVTAAVIET 61
D+ +++D+ +P G N + I+Y+D+++++ F A+LQ++E SERA +T IE
Sbjct: 68 DRAEWADIDPVPQNDG-PNPVVQIIYSDKFRDVYDYFRAVLQRDERSERAFKLTRDAIEL 126
Query: 62 VPALYTAWNYRFEICMSLFRKEDVSAWEKELDWLDEFTLNNPKNYQIWSYRQALLSEHPS 121
A YT W++R + SL ++D+ +E++++ PKNYQ+W +R+ L+
Sbjct: 127 NAANYTVWHFRRVLLKSL--QKDL---HEEMNYITAIIEEQPKNYQVWHHRRVLVEWLRD 181
Query: 122 PKLVRDLPILDVMIDDDTKNYHVWSYRKWSVQFFKDWSHELDFVNKYIDRDVYNNSAWTH 181
P ++L + +++ D KNYH W +R+W +Q FK W +EL +V++ + DV NNS W
Sbjct: 182 PS--QELEFIADILNQDAKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVRNNSVWNQ 239
Query: 182 RAFYLKNVDHVQEEGVAEVEIQYCMDKILLAPQNVSPWNHLRFIYKSFKNNEYDSKLINF 241
R F + N + V E E+QY ++ I L P N S WN+L+ I + ++Y
Sbjct: 240 RYFVISNTTGYNDRAVLEREVQYTLEMIKLVPHNESAWNYLKGILQDRGLSKY------- 292
Query: 242 ASSFIDNALETYTDQEERPISHVKSSFALELLADVYSQTDSEKSKIAYQA------LADT 295
N L D + S +F +++ D+ K I +A LA
Sbjct: 293 -----PNLLNQLLDLQPSHSSPYLIAFLVDIYEDMLENQCDNKEDILNKALELCEILAKE 347
Query: 296 WDPIRKNYWNLKIRQL 311
D IRK YW R L
Sbjct: 348 KDTIRKEYWRYIGRSL 363
>7295671 [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 331
Score = 144 bits (363), Expect = 2e-34
Identities = 91/314 (28%), Positives = 158/314 (49%), Gaps = 29/314 (9%)
Query: 2 DKCDYSDVKRIPIESGLENELCAILYTDQYKELVSLFVALLQQNELSERAMAVTAAVIET 61
++ D+ DV+ + + G N + +I Y+ +++E+ A++ + E S+RA+ +T +
Sbjct: 19 ERSDWEDVQPLAQDDG-PNPVVSIAYSQKFREVFDYMRAIIARGEKSQRALDLTTDALRL 77
Query: 62 VPALYTAWNYRFEICMSLFRKEDVSAWEKELDWLDEFTLNNPKNYQIWSYRQALLSEHPS 121
PA YT W YR ++ L K D+ A ELD+L E N KNYQ+W +R+ ++
Sbjct: 78 NPANYTVWQYRRDVLREL--KADLYA---ELDYLTEVIGQNSKNYQVWHHRRVIVEMLND 132
Query: 122 PKLVRDLPILDVMIDDDTKNYHVWSYRKWSVQFFKDWSHELDFVNKYIDRDVYNNSAWTH 181
P +L ++ D D KNYH W +R+W+++ F + EL FV++ I D NNSAW
Sbjct: 133 PSNELELTENALVNDGDAKNYHAWQHRQWAIRSFNLYDDELSFVDRLISEDQRNNSAWNQ 192
Query: 182 RAFYLKNVDHVQEEGVAEVEIQYCMDKILLAPQNVSPWNHLRFIYKSFKNNEYDSKLINF 241
R F +K+ E + + E+ Y M++I + N S WN+L + + + + L++
Sbjct: 193 RFFVIKHFGFTPE--LIQRELSYTMNRIRIIKNNESAWNYLVGV---MRQGDSGNALLSS 247
Query: 242 ASSFIDNALETYTDQEERPISHVKSSFALELLADVYSQ-------TDSEK-SKIAY---Q 290
+D E Y P + L L D+Y + +DS++ ++ Y +
Sbjct: 248 YPDVVDFVEELYQAGNRSP-------YLLAFLIDLYQEQALQLKASDSDQLARKVYGLCE 300
Query: 291 ALADTWDPIRKNYW 304
+A D IR+ YW
Sbjct: 301 DMATKHDVIRRKYW 314
>At3g59380 [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 340
Score = 127 bits (320), Expect = 2e-29
Identities = 88/323 (27%), Positives = 159/323 (48%), Gaps = 23/323 (7%)
Query: 3 KCDYSDVKRIPIESGLENELCAILYTDQYKELVSLFVALLQQNELSERAMAVTAAVIETV 62
+ ++SDV + + G N + I Y ++++E + F A+ +E S RA+ +T +
Sbjct: 26 RLEWSDVVPLTQDDG-PNPVVPIAYKEEFRETMDYFRAIYFSDERSPRALRLTEETLLLN 84
Query: 63 PALYTAWNYRFEICMSLFRKEDVSAWEKELDWLDEFTLNNPKNYQIWSYRQALLSEHPSP 122
YT W++R + +L D+ +EL++++ +N KNYQ+W +R+ + +
Sbjct: 85 SGNYTVWHFRRLVLEAL--NHDLF---EELEFIERIAEDNSKNYQLWHHRRWVAEKLGPD 139
Query: 123 KLVRDLPILDVMIDDDTKNYHVWSYRKWSVQFFKDWSHELDFVNKYIDRDVYNNSAWTHR 182
R+L ++ D K+YH WS+R+W+++ W ELD+ ++ ++ DV+NNSAW R
Sbjct: 140 VAGRELEFTRRVLSLDAKHYHAWSHRQWTLRALGGWEDELDYCHELLEADVFNNSAWNQR 199
Query: 183 AFYLKNVDHVQE-EGVAEVEIQYCMDKILLAPQNVSPWNHLRFIYKSFKNN-----EYDS 236
+ + + E + E E+ Y + IL P N S W +L+ +YK K + S
Sbjct: 200 YYVITQSPLLGGLEAMRESEVSYTIKAILTNPANESSWRYLKALYKDDKESWISDPSVSS 259
Query: 237 KLINFAS---SFIDNALETYTD---QEERPISHVKSSFALELLADVYSQTDSEKSKIAYQ 290
+N S F AL T D RP + K S + LA+ + ++ + +
Sbjct: 260 VCLNVLSRTDCFHGFALSTLLDLLCDGLRPTNEHKDS--VRALAN--EEPETNLANLVCT 315
Query: 291 ALADTWDPIRKNYWNLKIRQLTI 313
L DP+R NYW + ++T+
Sbjct: 316 ILGRV-DPVRANYWAWRKSKITV 337
>CE18099 [O] KOG0530 Protein farnesyltransferase alpha subunit/protein
geranylgeranyltransferase type I alpha subunit
Length = 328
Score = 125 bits (313), Expect = 1e-28
Identities = 91/313 (29%), Positives = 151/313 (48%), Gaps = 29/313 (9%)
Query: 2 DKCDYSDVKRIPIESGLENELCA-ILYTDQYKELVSLFVALLQQNELSERAMAVTAAVIE 60
D D+ D+ PI E E+ I T+ + + + F A+L +NE S+R MA+ I
Sbjct: 14 DNVDWKDIT--PIYPSKEEEVAVKIAVTEDFTDAFAYFRAILIKNEKSDRVMALLEDCIR 71
Query: 61 TVPALYTAWNYRFEICMSLFRKEDVSAWE--KELDWLDEFTLNNPKNYQIWSYRQALLSE 118
PA YT W YR +C++ W+ KE+ +L + +PKNYQ+W +R+ ++
Sbjct: 72 LNPANYTVWQYR-RVCLTEL------GWDLKKEMRYLSDIIQESPKNYQVWHHRRFIVET 124
Query: 119 HPSPKLVRDLPILDVMIDDDTKNYHVWSYRKWSVQFFK-DWSHELDFVNKYIDRDVYNNS 177
+ +L +I D+ KNYH W +R+W V+ FK EL F + D NNS
Sbjct: 125 IGESAVNDELHFCSEVIRDENKNYHAWQHRQWVVRTFKVPLEKELTFALHMLLLDNRNNS 184
Query: 178 AWTHRAFYLKNVDHVQEEGVAEVEIQYCMDKILLAPQNVSPWNHLR--FIYKSFKNNEYD 235
A+ +R F + D ++ ++EI I P N S WN+L I +N
Sbjct: 185 AYNYRYFLMTLYDKTEDASQLDIEINLAKKFIENIPNNESAWNYLAGLLITNGVTSN--- 241
Query: 236 SKLINFASSFIDNALETYTDQEERPISHVKSSFALELLADVYSQTDSEKS----KIAYQA 291
+ SF+++ ET +++ P + + A +L ++ +Q +E+S K Y+
Sbjct: 242 ----SDVVSFVEDLYETTPEEKRSPF--LLAFIADMMLENIENQKSAEESAGRAKKLYKD 295
Query: 292 LADTWDPIRKNYW 304
L + DP+R NY+
Sbjct: 296 L-QSIDPVRVNYY 307
>YJL031c [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 290
Score = 86.7 bits (213), Expect = 4e-17
Identities = 69/279 (24%), Positives = 131/279 (46%), Gaps = 30/279 (10%)
Query: 48 SERAMAVTAAVIETVPALYTAWNYRFEICMSLFRKEDVSAWEKELDWLDEFTLNNPKNYQ 107
S A+ T+ ++E P WNYR +I SL + ++ W+KEL ++ + PK Y
Sbjct: 8 SIEALKKTSELLEKNPEFNAIWNYRRDIIASLASELEIPFWDKELVFVMMLLKDYPKVYW 67
Query: 108 IWSYRQALLSEHP--SPKLVR-DLPILDVMIDDDTKNYHVWSYRKWSVQFFKDWSH---- 160
IW++R +L +P SPK+ + +L +++ +++ D +NYH W YR+ V + ++
Sbjct: 68 IWNHRLWVLKHYPTSSPKVWQTELAVVNKLLEQDARNYHGWHYRRIVVGNIESITNKSLD 127
Query: 161 --ELDFVNKYIDRDVYNNSAWTHRAFYLKNVDHVQEEG----VAEVEIQYCMDKILLAPQ 214
E ++ I+ ++ N SAW R + + E G EI Y ++ + +
Sbjct: 128 KEEFEYTTIKINNNISNYSAWHQRVQIISRMFQKGEVGNQKEYIRTEISYIINAMFTDAE 187
Query: 215 NVSPWNHLRF------IYKSFKNNEYDSKLINFASSFIDNALETYTDQEERPISHVKSSF 268
+ S W ++++ + K+ EY + +N L D+ E S ++ +
Sbjct: 188 DQSVWFYIKWFIKNDIVCKTLDEQEY----LKMLKDLRENILLINNDEIE--FSGKQNIW 241
Query: 269 ALEL---LADVYSQTD--SEKSKIAYQALADTWDPIRKN 302
L++ L D+ + + +E+S Y DP+RKN
Sbjct: 242 CLKILLVLEDILEEKEALTERSSEQYLVQLIDADPLRKN 280
>CE19541 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 580
Score = 81.3 bits (199), Expect = 2e-15
Identities = 55/235 (23%), Positives = 104/235 (43%), Gaps = 28/235 (11%)
Query: 28 TDQYKELVSLFVALLQQNELSERAMAVTAAVIETVPALYTAWNYR---FEICMSLFRKED 84
+ Q+ + VA ++ E + +++T A++E +YT WN R E+ M K
Sbjct: 25 SQQFLHVRDKIVAKREKGEYDDEILSLTQAILEKNADIYTFWNIRRTTIELRMEANEKVQ 84
Query: 85 VSAWEKELDWLD-----------------EFTLNNPKNYQIWSYRQALLSEHPSPKLVRD 127
SA +E + E +NPK+Y W R L +P ++
Sbjct: 85 QSADAEEEEKTKSSQKIENLLAGELFLSYECIKSNPKSYSAWYQRAWALQRQSAPDFKKE 144
Query: 128 LPILDVMIDDDTKNYHVWSYRKWSVQFFK-DWSHELDFVNKYIDRDVYNNSAWTHRAFYL 186
L + + + D +N+H W +R+ + K + EL+F NK I+ + N SAW +R+ L
Sbjct: 145 LALCEKALQLDCRNFHCWDHRRIVARMAKRSEAEELEFSNKLINDNFSNYSAWHYRSIAL 204
Query: 187 KNVDHVQEEGVAEV-------EIQYCMDKILLAPQNVSPWNHLRFIYKSFKNNEY 234
KN+ ++ G ++ E+Q + + ++ S W + R++ + E+
Sbjct: 205 KNIHRDEKTGAPKIDDELIASELQKVKNAFFMDAEDQSAWTYTRWLLEVGSGKEF 259
>Hs4759016 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 567
Score = 80.5 bits (197), Expect = 3e-15
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 13/196 (6%)
Query: 43 QQNELSERAMAVTAAVIETVPALYTAWNYRFEICMSLFRK---EDVSAWEK-ELDWLDEF 98
Q EL E + +T+ ++ P T WN R E+ L + E+++A K EL +L+
Sbjct: 40 QAGELDESVLELTSQILGANPDFATLWNCRREVLQQLETQKSPEELAALVKAELGFLESC 99
Query: 99 TLNNPKNYQIWSYRQALLSEHPSPKLVRDLPILDVMIDDDTKNYHVWSYRKW-SVQFFKD 157
NPK+Y W +R LL P P R+L + ++ D +N+H W YR++ + Q
Sbjct: 100 LRVNPKSYGTWHHRCWLLGRLPEPNWTRELELCARFLEVDERNFHCWDYRRFVATQAAVP 159
Query: 158 WSHELDFVNKYIDRDVYNNSAWTHRAFYLKNVDHVQEEG--------VAEVEIQYCMDKI 209
+ EL F + I R+ N S+W +R+ L + + G V E++ +
Sbjct: 160 PAEELAFTDSLITRNFSNYSSWHYRSCLLPQLHPQPDSGPQGRLPEDVLLKELELVQNAF 219
Query: 210 LLAPQNVSPWNHLRFI 225
P + S W + R++
Sbjct: 220 FTDPNDQSAWFYHRWL 235
>SPCC1620.05 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 344
Score = 68.9 bits (167), Expect = 9e-12
Identities = 49/217 (22%), Positives = 104/217 (47%), Gaps = 20/217 (9%)
Query: 29 DQYKELVSLFVALLQQNELSERAMAVTAAVIETVPALYTAWNYRFEICMS-LFRKEDVSA 87
++Y+ LVS F ++ + SE + +T +++ P Y+ WNYR EI ++ +F K ++
Sbjct: 26 EEYRGLVSRFQEARKRKDYSEGNLKLTTELLDWNPETYSVWNYRREILLNDVFPKISLNE 85
Query: 88 WEKELDWLDEFTLNN----PKNYQIWSYRQALLSEHPSPKLVRDLPILDVMIDDDTKNYH 143
+ LD ++ L+ PK Y I+++R+ L P P ++ I + ++ D +N+H
Sbjct: 86 KQDLLDNELKYVLSKMKVFPKVYWIFNHRRWCLENAPYPNWNYEMMITEKLLSADARNFH 145
Query: 144 VWSYRKWSVQFFKDWSH------ELDFVNKYIDRDVYNNSAWTHRAFYLKNVDHVQEE-- 195
W YR++ V + + E+++ I + N SA +R ++ + +++ +
Sbjct: 146 GWHYRRYVVSQIERAGNCSLAKKEMEYTTSAIATNFSNFSALHNRTKLIETILNLEADPN 205
Query: 196 -------GVAEVEIQYCMDKILLAPQNVSPWNHLRFI 225
+ E E+ + P + S W + R++
Sbjct: 206 SQKALAKQILEQELDMIHQAVFTDPDDSSVWIYHRWL 242
Score = 54.7 bits (130), Expect = 2e-07
Identities = 34/157 (21%), Positives = 71/157 (44%), Gaps = 22/157 (14%)
Query: 92 LDWLDEFTLNNPKNYQIWSYRQALLSEHPSPKLVRDLPILDVMIDDDTKN---------- 141
LDW NP+ Y +W+YR+ +L PK+ L ++D++ K
Sbjct: 56 LDW-------NPETYSVWNYRREILLNDVFPKI--SLNEKQDLLDNELKYVLSKMKVFPK 106
Query: 142 -YHVWSYRKWSVQF--FKDWSHELDFVNKYIDRDVYNNSAWTHRAFYLKNVDHVQEEGVA 198
Y ++++R+W ++ + +W++E+ K + D N W +R + + ++ +A
Sbjct: 107 VYWIFNHRRWCLENAPYPNWNYEMMITEKLLSADARNFHGWHYRRYVVSQIERAGNCSLA 166
Query: 199 EVEIQYCMDKILLAPQNVSPWNHLRFIYKSFKNNEYD 235
+ E++Y I N S ++ + ++ N E D
Sbjct: 167 KKEMEYTTSAIATNFSNFSALHNRTKLIETILNLEAD 203
>At4g24490 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 683
Score = 68.2 bits (165), Expect = 1e-11
Identities = 57/213 (26%), Positives = 97/213 (44%), Gaps = 13/213 (6%)
Query: 19 ENELCAILYTDQYKELVSLFVALLQQNELSERAMAVTAAVIETVPALYTAWNYR-FEICM 77
E E + Q + L S F+ + A+ ++ ++E P YTAWNYR +
Sbjct: 12 EEEAASAAKAVQLRSLQSQFMTNHHDKIYTNEAIELSTKLLEINPEAYTAWNYRKLAVED 71
Query: 78 SLFRKED----VSA-WEKELDWLDEFTLNNPKNYQIWSYRQALLSEHPSPKLVRDLPILD 132
L R E VSA ++EL ++ N K+Y W +R+ +LS+ S + +L +L+
Sbjct: 72 RLARIEPDPNLVSAILDEELRVVESALRQNFKSYGAWHHRKWVLSKGHS-SVGNELRLLE 130
Query: 133 VMIDDDTKNYHVWSYRKWSVQFF-KDWSHELDFVNKYIDRDVYNNSAWTHRAFYL----- 186
D++N+H W+YR++ V+ + EL + + I+ + N SAW +R+ L
Sbjct: 131 KFQKLDSRNFHAWNYRRFVVELTNRSEQDELQYTDDMINNNFSNYSAWHNRSVLLSSLLA 190
Query: 187 KNVDHVQEEGVAEVEIQYCMDKILLAPQNVSPW 219
+N D E + I P + S W
Sbjct: 191 QNADGFMPNIKIPEEYDFVHSAIFTEPDDQSGW 223
>7296795 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 515
Score = 64.7 bits (156), Expect = 2e-10
Identities = 37/145 (25%), Positives = 76/145 (51%), Gaps = 7/145 (4%)
Query: 91 ELDWLDEFTLNNPKNYQIWSYRQALLSEHPSPKLVRDLPILDVMIDDDTKNYHVWSYRKW 150
ELD ++ + NPK+Y W +R L ++P +++ + + + D +N+H W YR++
Sbjct: 124 ELDLTEQCLMVNPKSYNAWHHRCWTLEQNPRADWQQEVKLCNKYLKFDERNFHTWDYRRY 183
Query: 151 -SVQFFKDWSHELDFVNKYIDRDVYNNSAWTHRAFYLKNV--DHVQEEGVAEVEIQYCMD 207
+ + + ELDF + I + N S+W HR+ L + + ++ ++E ++Q ++
Sbjct: 184 VTGKAMVPATQELDFCTEKIRANFSNYSSWHHRSLLLPELYPNQQRDRPMSEEKLQKELE 243
Query: 208 KILLA----PQNVSPWNHLRFIYKS 228
+L A P + S W + R++ S
Sbjct: 244 MVLTAAFTDPNDSSAWFYQRWLLGS 268
Score = 55.5 bits (132), Expect = 1e-07
Identities = 56/252 (22%), Positives = 98/252 (38%), Gaps = 33/252 (13%)
Query: 43 QQNELSERAMAVTAAVIETVPALYTAWNYRFEICMS-LFR-KEDVSAWEKELDWLDEFTL 100
+ EL +++T ++ P + WN R E + LFR KE+ + E + E
Sbjct: 40 EAGELDNEMLSLTVQILLRNPDVSMLWNIRRECVLEKLFRLKEEEATCETPSEEKPEKEN 99
Query: 101 NNPKNYQIWSYRQALLSEHPSPKLVRDLPILDVMIDDDTKNYHVWSYRKWSVQFFK--DW 158
+N S ++A + +L + + + + K+Y+ W +R W+++ DW
Sbjct: 100 QTGENKP--SEKKAAGEDKAHSIFTCELDLTEQCLMVNPKSYNAWHHRCWTLEQNPRADW 157
Query: 159 SHELDFVNKYIDRDVYNNSAWTHRAFYLKNVDHVQEEGVAEVEIQYCMDKILLAPQNVSP 218
E+ NKY+ D N W +R Y+ V A E+ +C +KI N S
Sbjct: 158 QQEVKLCNKYLKFDERNFHTWDYRR-YVTGKAMVP----ATQELDFCTEKIRANFSNYSS 212
Query: 219 WNHLRFIYKSFKNNEYDSKLINFASSFIDNALETYTDQEERPISHVKSSFALELLADVYS 278
W+H + N+ Q +RP+S K LE++
Sbjct: 213 WHHRSLLLPELYPNQ----------------------QRDRPMSEEKLQKELEMVLTAAF 250
Query: 279 QTDSEKSKIAYQ 290
++ S YQ
Sbjct: 251 TDPNDSSAWFYQ 262
>At5g41820 [O] KOG0529 Protein geranylgeranyltransferase type II alpha subunit
Length = 687
Score = 62.4 bits (150), Expect = 8e-10
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 28/217 (12%)
Query: 30 QYKELVSLFVALLQQNELSERAMAVTAAVIETVPALYTAWNYRFEICMSLFRKEDV---- 85
+ + L S F++ Q ++ A+ ++A ++ T P YTAWNY ++ ED
Sbjct: 21 ELRSLQSQFMSNHHQKIYTKEAIQLSAKLLITNPEFYTAWNYP-KLAFESRLDEDSDPSL 79
Query: 86 --SAWEKELDWLDEFTLNNPKNYQIWSYRQALLSE--HPSPKLVRDLPIL---------- 131
S ++EL + N K+Y W +R+ +LS+ H P L +L +L
Sbjct: 80 VNSIIDEELGVVQNALERNVKSYGAWYHRKWVLSKKGHYYPSLENELQLLNDYQKQAHQK 139
Query: 132 --DVMIDDDTKNYHVWSYRKWSVQFFK-DWSHELDFVNKYI-DRDVYNNSAWTHRAFYL- 186
D DD ++N+H W+YR++ V+ K EL + I D SAW +R+ +
Sbjct: 140 QDDEKQDDPSRNFHAWNYRRFVVELTKTSEEDELQYTTDMISDISFTIYSAWHYRSVLVS 199
Query: 187 ----KNVDHVQEEGVAEVEIQYCMDKILLAPQNVSPW 219
K D + E+ Y I + S W
Sbjct: 200 SLVAKKADGFMPKETIRRELDYVHSAIFTLEEKQSGW 236
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.134 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,585,013
Number of Sequences: 60738
Number of extensions: 846984
Number of successful extensions: 2237
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2124
Number of HSP's gapped (non-prelim): 22
length of query: 313
length of database: 30,389,216
effective HSP length: 106
effective length of query: 207
effective length of database: 23,950,988
effective search space: 4957854516
effective search space used: 4957854516
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)