ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV4682 check: MH L KOG1803 Replication, recombination and repair DNA helicase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV4682 1611378 1609336 -681
(681 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YKL017c [L] KOG1803 DNA helicase 671 0.0
SPCC737.07c [L] KOG1803 DNA helicase 460 e-129
Hs4504623 [L] KOG1803 DNA helicase 388 e-107
At2g03270 [L] KOG1803 DNA helicase 376 e-104
At5g35970 [L] KOG1803 DNA helicase 221 3e-57
SPAC16C9.06c [A] KOG1802 RNA helicase nonsense mRNA reducing fac... 191 3e-48
YMR080c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 189 9e-48
SPAC6G9.10c [A] KOG1801 tRNA-splicing endonuclease positive effe... 187 6e-47
Hs18375673 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 182 1e-45
CE19303 [L] KOG1803 DNA helicase 181 3e-45
At5g47010 [A] KOG1802 RNA helicase nonsense mRNA reducing factor... 176 8e-44
YER176w [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 175 2e-43
CE28367 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 172 1e-42
SPBC29A10.10c [A] KOG1801 tRNA-splicing endonuclease positive ef... 167 6e-41
ECU10g1640 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 161 3e-39
ECU05g1110 [L] KOG1803 DNA helicase 160 8e-39
Hs20470741 [L] KOG1805 DNA replication helicase 159 2e-38
CE08664 [L] KOG1803 DNA helicase 158 3e-38
Hs7662212 [A] KOG1801 tRNA-splicing endonuclease positive effect... 157 4e-38
YLR430w [A] KOG1801 tRNA-splicing endonuclease positive effector... 156 1e-37
CE23725 [L] KOG1805 DNA replication helicase 154 3e-37
CE02219 [L] KOG1805 DNA replication helicase 154 3e-37
At1g08840 [L] KOG1805 DNA replication helicase 146 9e-35
7291108 [L] KOG1805 DNA replication helicase 146 1e-34
At1g05460 [A] KOG1804 RNA helicase 144 4e-34
7302834 [A] KOG1804 RNA helicase 143 1e-33
YHR164c [L] KOG1805 DNA replication helicase 141 4e-33
SPBC16D10.04c [L] KOG1805 DNA replication helicase 139 1e-32
Hs14251207_2 [A] KOG1804 RNA helicase 139 1e-32
At1g16800 [A] KOG1801 tRNA-splicing endonuclease positive effect... 137 7e-32
7295157 [A] KOG1801 tRNA-splicing endonuclease positive effector... 129 1e-29
Hs14211540 [A] KOG1804 RNA helicase 125 2e-28
7292369_2 [A] KOG1804 RNA helicase 125 2e-28
7301121 [L] KOG1807 Helicases 123 8e-28
7303245 [A] KOG1804 RNA helicase 119 2e-26
Hs21703358_3 [A] KOG1804 RNA helicase 119 2e-26
Hs14769950_3 [A] KOG1804 RNA helicase 119 2e-26
At5g37030 [A] KOG1801 tRNA-splicing endonuclease positive effect... 117 8e-26
At4g05540 [A] KOG1801 tRNA-splicing endonuclease positive effect... 117 8e-26
At4g30100 [A] KOG1801 tRNA-splicing endonuclease positive effect... 116 1e-25
At5g52090 [A] KOG1801 tRNA-splicing endonuclease positive effect... 114 5e-25
At1g65810 [A] KOG1801 tRNA-splicing endonuclease positive effect... 114 5e-25
At5g37150 [A] KOG1801 tRNA-splicing endonuclease positive effect... 114 6e-25
At5g37140 [A] KOG1801 tRNA-splicing endonuclease positive effect... 109 1e-23
Hs7661884 [A] KOG1804 RNA helicase 108 4e-23
At5g37160 [A] KOG1801 tRNA-splicing endonuclease positive effect... 108 4e-23
At2g19120 [A] KOG1801 tRNA-splicing endonuclease positive effect... 107 5e-23
CE18803 [L] KOG1803 DNA helicase 100 6e-21
At1g65780 [A] KOG1801 tRNA-splicing endonuclease positive effect... 100 7e-21
SPCC1739.03 [L] KOG1807 Helicases 97 8e-20
Hs14786304_1 [L] KOG1807 Helicases 96 2e-19
Hs14750549 [L] KOG1806 DEAD box containing helicases 90 1e-17
7292718 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (... 89 2e-17
Hs20162560 [A] KOG1802 RNA helicase nonsense mRNA reducing facto... 89 3e-17
CE24674 [L] KOG1806 DEAD box containing helicases 83 1e-15
CE06677 [L] KOG1807 Helicases 80 1e-14
At2g38770 [L] KOG1806 DEAD box containing helicases 70 8e-12
7299528 [L] KOG1806 DEAD box containing helicases 70 8e-12
CE27795 [A] KOG1801 tRNA-splicing endonuclease positive effector... 70 1e-11
CE05420 [A] KOG1801 tRNA-splicing endonuclease positive effector... 70 1e-11
CE01466 [A] KOG1801 tRNA-splicing endonuclease positive effector... 70 1e-11
7294354 [A] KOG1804 RNA helicase 67 1e-10
CE07357 [A] KOG1801 tRNA-splicing endonuclease positive effector... 55 5e-07
CE01610 [A] KOG1801 tRNA-splicing endonuclease positive effector... 54 6e-07
>YKL017c [L] KOG1803 DNA helicase
Length = 683
Score = 671 bits (1730), Expect = 0.0
Identities = 366/690 (53%), Positives = 489/690 (70%), Gaps = 39/690 (5%)
Query: 10 VNKQVAEKFLDGISHEQQQDVEQTSKLLASAPLPKLIAAGLAINHLQLDNIRTGIGSKLY 69
+NK++A KFL I HE++QD++ TS+LL + + +L+ GLAIN++ L+NIR+G+ KLY
Sbjct: 1 MNKELASKFLSSIKHEREQDIQTTSRLLTTLSIQQLVQNGLAINNIHLENIRSGLIGKLY 60
Query: 70 LELSADPAITKELNTGSFKVGDIVLVQPS-------AKAKSKK------DETVNLDAVVS 116
+EL + A+ ++ G KVGDIVLV+P+ K K KK E VV
Sbjct: 61 MELGPNLAVNDKIQRGDIKVGDIVLVRPAKTKVNTKTKPKVKKVSEDSNGEQAECSGVVY 120
Query: 117 KVSNNQIVLAVDESKDQDAVQLYSFNRLCLLKTTNTITYKRMQSTMRKLAEFNSIPDNIL 176
K+S+ QI +A++ES+D A YS+++L +LKTTN +TY RM+STMRKL+E +S + +
Sbjct: 121 KMSDTQITIALEESQDVIATTFYSYSKLYILKTTNVVTYNRMESTMRKLSEISSPIQDKI 180
Query: 177 IQYMLHERKFIKKDPE-HNVK-FYNEQLNESQRDAIQHSLSNEISIIHGPPGTGKTYTLV 234
IQY+++ER FI N+K F N LN+SQ+ AI +++N+++IIHGPPGTGKT+TL+
Sbjct: 181 IQYLVNERPFIPNTNSFQNIKSFLNPNLNDSQKTAINFAINNDLTIIHGPPGTGKTFTLI 240
Query: 235 ELIKQLYDRG--ERILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLD 292
ELI+QL + ERIL+CGPSNISVDTILERL+ +VP + LLRIGHP+RLL HSLD
Sbjct: 241 ELIQQLLIKNPEERILICGPSNISVDTILERLTPLVPNNLLLRIGHPARLLDSNKRHSLD 300
Query: 293 VLSKKGDSGMILKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINI 352
+LSKK I+KDI +EID I KKLK+ + RK+ W E+K LRK+L++RE + ++
Sbjct: 301 ILSKKNT---IVKDISQEIDKLIQENKKLKNYKQRKENWNEIKLLRKDLKKREFKTIKDL 357
Query: 353 ILKSKIVVCTLHGSSSRELLSAY--DLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDM 410
I++S+IVV TLHGSSSREL S Y D +LF+TLIIDEVSQ++EPQCWIPLI+H ++
Sbjct: 358 IIQSRIVVTTLHGSSSRELCSLYRDDPNFQLFDTLIIDEVSQAMEPQCWIPLIAH-QNQF 416
Query: 411 QRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGN-EFKYLLNVQYRMNEEIM 469
+L++AGD+KQLPPTIKTED+ V L TT+FDR+++ + + LNVQYRMN++IM
Sbjct: 417 HKLVLAGDNKQLPPTIKTEDDKNVIHNLETTLFDRIIKIFPKRDMVKFLNVQYRMNQKIM 476
Query: 470 QFSSNELYDGKLKADDSVAKQLLADLPGV-----ESNDNTTFPCIWLDTEGDDFPERSDE 524
+F S+ +Y+GKL AD +VA +LL DLP V E +D+T P IW DT+GD+F E +DE
Sbjct: 477 EFPSHSMYNGKLLADATVANRLLIDLPTVDATPSEDDDDTKIPLIWYDTQGDEFQETADE 536
Query: 525 NDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHE 584
++ SKYNE E + H+E L V E SIGVISPYN+QVS LKKLIH+
Sbjct: 537 AT--------ILGSKYNEGEIAIVKEHIENLRSFNVPENSIGVISPYNAQVSHLKKLIHD 588
Query: 585 --KHQAIEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIG 642
K IEISTVDGFQGREK+ IILSLVRSNE FEVGFLK+ERRLNVAMTRP+RQL V+G
Sbjct: 589 ELKLTDIEISTVDGFQGREKDVIILSLVRSNEKFEVGFLKEERRLNVAMTRPRRQLVVVG 648
Query: 643 NMEMLSRCRVPFLNRWVLWVESGFEVIYPD 672
N+E+L RC +L W W E +V YP+
Sbjct: 649 NIEVLQRCGNKYLKSWSEWCEENADVRYPN 678
>SPCC737.07c [L] KOG1803 DNA helicase
Length = 660
Score = 460 bits (1183), Expect = e-129
Identities = 263/675 (38%), Positives = 423/675 (61%), Gaps = 43/675 (6%)
Query: 12 KQVAEKFLDGISHEQQQDVEQTSKLLASAPLPKLIAAGLAINHLQLDNIRTGIGSKLYLE 71
++ ++ ++ + Q+ +V++T K + PL L GLA+ +L++ ++TG G K ++
Sbjct: 16 QKFGDREIEFVDEAQKSEVDETEKSIKRFPLSVLQRKGLALINLRIGVVKTGFGGKTIID 75
Query: 72 LSADPAIT--KELNTGSFKVGDIVLVQP---SAKAKSKKDETVNLDAVVSKVSNNQIVLA 126
DPA + +EL SF GD+V ++ S+K K + ++++ VV++V I +A
Sbjct: 76 FEKDPAFSNGEELPANSFSPGDVVSIRQDFQSSKKKRPNETDISVEGVVTRVHERHISVA 135
Query: 127 VDESKDQDAVQLYSFNRLCLLKTTNTITYKRMQSTMRKLAEFNSIPD--NILIQYMLHER 184
+ +D + S RL ++K N +TY+RM+ TM + SIP+ N L ++ +
Sbjct: 136 LKSEEDIPS----SVTRLSVVKLVNRVTYERMRHTMLEFKR--SIPEYRNSLFYTLIGRK 189
Query: 185 KF---IKKDPEHNVKFYNEQLNESQRDAIQHSLS-NEISIIHGPPGTGKTYTLVELIKQL 240
K I + ++K++N++LN SQ+ A++ S++ E+S+IHGPPGTGKT+TLVE+I+QL
Sbjct: 190 KADVSIDQKLIGDIKYFNKELNASQKKAVKFSIAVKELSLIHGPPGTGKTHTLVEIIQQL 249
Query: 241 YDRGERILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDS 300
R +RILVCG SN++VD I++RLS G ++R+GHP+RLLP +L HSLDVLS+ GD+
Sbjct: 250 VLRNKRILVCGASNLAVDNIVDRLSS--SGIPMVRLGHPARLLPSILDHSLDVLSRTGDN 307
Query: 301 GMILKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVV 360
G +++ I ++ID ++ + K K+ R+R++ ++ ++ LRK+ R+ E + NI+ SK+V
Sbjct: 308 GDVIRGISEDIDVCLSKITKTKNGRERREIYKNIRELRKDYRKYEAKTVANIVSASKVVF 367
Query: 361 CTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDK 420
CTLHG+ SR+L + + F+ +IIDE SQ+LEPQCWIPL+ M ++I+AGD
Sbjct: 368 CTLHGAGSRQL------KGQRFDAVIIDEASQALEPQCWIPLLG-----MNKVILAGDHM 416
Query: 421 QLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGK 480
QL P ++++ ++F+RL++ G+ K LN+QYRM+E I +F S+ YD K
Sbjct: 417 QLSPNVQSKRP-------YISMFERLVKSQGDLVKCFLNIQYRMHELISKFPSDTFYDSK 469
Query: 481 LKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKY 540
L + V K+LL DL VE + T P + DT G+ E+D D + SK
Sbjct: 470 LVPAEEVKKRLLMDLENVEETELTDSPIYFYDTLGN-----YQEDDRSEDMQNFYQDSKS 524
Query: 541 NENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGR 600
N EA + YH+ L++AG+ + I V++PYN+QV+L+++L+ EK +E+ +VD QGR
Sbjct: 525 NHWEAQIVSYHISGLLEAGLEAKDIAVVTPYNAQVALIRQLLKEKGIEVEMGSVDKVQGR 584
Query: 601 EKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRVPFLNRWVL 660
EKE II SLVRSN+ EVGFL ++RRLNVA+TRPKR LCVIG+ + + F ++WV
Sbjct: 585 EKEAIIFSLVRSNDVREVGFLAEKRRLNVAITRPKRHLCVIGDSNTV-KWASEFFHQWVD 643
Query: 661 WVESGFEVIYPDPSI 675
++E V+ D ++
Sbjct: 644 FLEENAIVMDIDATM 658
>Hs4504623 [L] KOG1803 DNA helicase
Length = 993
Score = 388 bits (996), Expect = e-107
Identities = 233/627 (37%), Positives = 360/627 (57%), Gaps = 29/627 (4%)
Query: 17 KFLDGISHEQQQDVEQTSKLLASAPLPKLIAAGLAINHLQLDNIRTGIGSKLYLELSADP 76
K LD + E+ +VE+ + L +L + G+ + LQ+ + RTG+ +L +
Sbjct: 12 KQLDLLELERDAEVEERRSWQENISLKELQSRGVCLLKLQVSSQRTGLYGRLLVTFEPRR 71
Query: 77 -AITKELNTGSFKVGDIVLVQPSAKAKSKKDETVNLDAVVSKVSNNQIVLAVDESKDQDA 135
L + SF GDIV + +A S+ ++++V+ + +A DES D
Sbjct: 72 YGSAAALPSNSFTSGDIVGLYDAANEGSQL-----ATGILTRVTQKSVTVAFDESHDFQ- 125
Query: 136 VQLYSFNRLCLLKTTNTITYKRMQSTMRKLAEFNSIPDNILIQYMLHERKFIKKDPEHNV 195
+ L N LLK N +TY+R++ + L +++S P + LI+ + H +
Sbjct: 126 LSLDRENSYRLLKLANDVTYRRLKKALIALKKYHSGPASSLIEVLFGRSAPSPASEIHPL 185
Query: 196 KFYNEQLNESQRDAIQHSLSN-EISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGPSN 254
F+N L+ SQ++A+ +LS E++IIHGPPGTGKT T+VE+I Q +G ++L C PSN
Sbjct: 186 TFFNTCLDTSQKEAVSFALSQKELAIIHGPPGTGKTTTVVEIILQAVKQGLKVLCCAPSN 245
Query: 255 ISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDT 314
I+VD ++ERL+ + +LR+GHP+RLL V HSLD + + DS + DI K+ID
Sbjct: 246 IAVDNLVERLA--LCKQRILRLGHPARLLESVQQHSLDAVLARSDSAQNVADIRKDIDQV 303
Query: 315 IASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSA 374
KK + R++ E+K LRKEL++RE++ ++ + + +V+ T G+S+ L
Sbjct: 304 FVKNKKTQDKREKSNFRNEIKLLRKELKEREEAAMLESLTSANVVLATNTGASADGPLKL 363
Query: 375 YDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKV 434
L F+ ++IDE +Q+LE CWIPL+ ++ I+AGD KQLPPT T +
Sbjct: 364 --LPESYFDVVVIDECAQALEASCWIPLLK-----ARKCILAGDHKQLPPT--TVSHKAA 414
Query: 435 KRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLAD 494
LS ++ +RL + YG L VQYRM++ IM+++S+ +Y G++ A SVA+ LL D
Sbjct: 415 LAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMRWASDTMYLGQVTAHSSVARHLLRD 474
Query: 495 LPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQ 554
LPGV + + T P + +DT G E +E++ SK N E L H++
Sbjct: 475 LPGVAATEETGVPLLLVDTAGCGLFELEEEDEQ----------SKGNPGEVRLVSLHIQA 524
Query: 555 LIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGREKECIILSLVRSNE 614
L+ AGV I V+SPYN QV LL++ + +H +EI +VDGFQGREKE +ILS VRSN
Sbjct: 525 LVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDGFQGREKEAVILSFVRSNR 584
Query: 615 NFEVGFLKDERRLNVAMTRPKRQLCVI 641
EVGFL ++RR+NVA+TR +R + VI
Sbjct: 585 KGEVGFLAEDRRINVAVTRARRHVAVI 611
>At2g03270 [L] KOG1803 DNA helicase
Length = 635
Score = 376 bits (965), Expect = e-104
Identities = 246/655 (37%), Positives = 382/655 (57%), Gaps = 47/655 (7%)
Query: 22 ISHEQQQDVEQTSKLLASAPLPKLIAAGLAINHLQLDNIRTGIGSKLYLELSADPAITKE 81
I E++ ++ + AS + G I +L+ +++TG+ K +E ++
Sbjct: 14 IDMEKEAEISMSLTSGASRNIETAQKKGTTILNLKCVDVQTGLMGKSLIEFQSNKGDV-- 71
Query: 82 LNTGSFKVGDIVLVQPSAKAKSKKDETVNLDAVVSKVSNNQIVLAVDESKDQDAVQLYSF 141
L F D+V+++ + KS + VV ++ ++ I + DE ++
Sbjct: 72 LPAHKFGNHDVVVLKLN---KSDLGSSPLAQGVVYRLKDSSITVVFDEVPEEGLN----- 123
Query: 142 NRLCLLKTTNTITYKRMQSTMRKLAE-FNSIPDNILIQYMLHERK--FIKKDPEHNVKFY 198
L L K N +TY+RM+ T+ +L++ P + L+ + ER+ KKD + F
Sbjct: 124 TSLRLEKLANEVTYRRMKDTLIQLSKGVLRGPASDLVPVLFGERQPSVSKKDVKSFTPF- 182
Query: 199 NEQLNESQRDAIQHSLSN-EISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGPSNISV 257
N+ L++SQ+DAI +LS+ ++ ++HGPPGTGKT T+VE++ Q RG +IL C SNI+V
Sbjct: 183 NKNLDQSQKDAITKALSSKDVFLLHGPPGTGKTTTVVEIVLQEVKRGSKILACAASNIAV 242
Query: 258 DTILERLSKVVPGD-ELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIA 316
D I+ERL VP +L+R+GHP+RLLPQVL +LD KGD+ + DI KE+
Sbjct: 243 DNIVERL---VPHKVKLVRVGHPARLLPQVLDSALDAQVLKGDNSGLANDIRKEMKALNG 299
Query: 317 SVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYD 376
+ K K R+ +E++ L KE R+R++ + ++I + +++ TL G+ +R+L
Sbjct: 300 KLLKAKDKNTRRLIQKELRTLGKEERKRQQLAVSDVIKNADVILTTLTGALTRKL----- 354
Query: 377 LQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKR 436
++ F+ +IIDE +Q+LE CWI L+ R I+AGD QLPPTI++ + ++ +
Sbjct: 355 -DNRTFDLVIIDEGAQALEVACWIALLKG-----SRCILAGDHLQLPPTIQSAEAER--K 406
Query: 437 LLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLP 496
L T+F+RL YG+E K +L VQYRM+E IM +SS ELYD K+ A SVA +L DL
Sbjct: 407 GLGRTLFERLADLYGDEIKSMLTVQYRMHELIMNWSSKELYDNKITAHSSVASHMLFDLE 466
Query: 497 GVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLI 556
V + +T + +DT G D E+ DE + S YNE EA +A+ H ++L+
Sbjct: 467 NVTKSSSTEATLLLVDTAGCDMEEKKDEEE-----------STYNEGEAEVAMAHAKRLM 515
Query: 557 KAGVTEESIGVISPYNSQVSLLKKLI--HEKHQAIEISTVDGFQGREKECIILSLVRSNE 614
++GV IG+I+PY +QV LL+ L EK + +EISTVDGFQGREKE II+S+VRSN
Sbjct: 516 ESGVQPSDIGIITPYAAQVMLLRILRGKEEKLKDMEISTVDGFQGREKEAIIISMVRSNS 575
Query: 615 NFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRVPFLNRWVLWVESGFEVI 669
EVGFLKD+RR+NVA+TR +RQ C++ + E +S FL R + + E E +
Sbjct: 576 KKEVGFLKDQRRMNVAVTRSRRQCCIVCDTETVS--SDAFLKRMIEYFEEHGEYL 628
>At5g35970 [L] KOG1803 DNA helicase
Length = 750
Score = 221 bits (563), Expect = 3e-57
Identities = 160/490 (32%), Positives = 259/490 (52%), Gaps = 53/490 (10%)
Query: 203 NESQRDAIQHSLSNE--ISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGPSNISVDTI 260
+ SQR AI ++ + + I+ GPPGTGKT L E+I +GER+LV P+N +VD +
Sbjct: 277 DSSQRRAIALGVNKKRPVMIVQGPPGTGKTGMLKEVITLAVQQGERVLVTAPTNAAVDNM 336
Query: 261 LERLSKVVPGDELLRIGHPSRLLPQVLSHSL-------------DVLSKKGDSGMILKDI 307
+E+L + G ++R+G+P+R+ V S SL ++ KK D L+
Sbjct: 337 VEKLLHL--GLNIVRVGNPARISSAVASKSLGEIVNSKLASFRAELERKKSDLRKDLRQC 394
Query: 308 MKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSS 367
+++ D A +++L +K L K L+++EK + I+ +++V T G++
Sbjct: 395 LRD-DVLAAGIRQL------------LKQLGKTLKKKEKETVKEILSNAQVVFATNIGAA 441
Query: 368 SRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIK 427
+ + + F+ ++IDE QS+EP CWIP++ +R I++GD QL P +
Sbjct: 442 DPLIR-----RLETFDLVVIDEAGQSIEPSCWIPILQG-----KRCILSGDPCQLAPVVL 491
Query: 428 TEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSV 487
+ ++ L ++ +R + L QYRMN+ I ++S E+Y G LK+ SV
Sbjct: 492 SRK--ALEGGLGVSLLERAASLHDGVLATKLTTQYRMNDVIAGWASKEMYGGWLKSAPSV 549
Query: 488 AKQLLADLPGVESNDNTTFPCIWLDTEGD--DFPERSDENDNDADDKFHLVSSKYNENEA 545
A LL D P V++ T P + LDT +E + A S YNE EA
Sbjct: 550 ASHLLIDSPFVKATWITQCPLVLLDTRMPYGSLSVGCEERLDPAG-----TGSLYNEGEA 604
Query: 546 YLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQA--IEISTVDGFQGREKE 603
+ + HV LI AGV+ +I V SPY +QV LL++ + + A +E++T+D FQGRE +
Sbjct: 605 DIVVNHVISLIYAGVSPMAIAVQSPYVAQVQLLRERLDDFPVADGVEVATIDSFQGREAD 664
Query: 604 CIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRVPFLNRWVLWVE 663
+I+S+VRSN VGFL D RR+NVA+TR ++ + V+ + + C FL R + +
Sbjct: 665 AVIISMVRSNNLGAVGFLGDSRRMNVAITRARKHVAVVCDSSTI--CHNTFLARLLRHIR 722
Query: 664 SGFEVIYPDP 673
V + DP
Sbjct: 723 YFGRVKHADP 732
>SPAC16C9.06c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 925
Score = 191 bits (485), Expect = 3e-48
Identities = 163/556 (29%), Positives = 279/556 (49%), Gaps = 69/556 (12%)
Query: 115 VSKVSNNQIVLAVDESKDQDAVQLYSFNRLCLLKTTNTITYKRMQSTMRKLAEFNSIPDN 174
V K+ NN E K D V + + + + ++ RMQ+ +R A S +
Sbjct: 302 VIKIPNNVSDEVGLELKRSDKVPIECTHNFSVDYVWKSTSFDRMQTALRLFATDGSRLSS 361
Query: 175 ILIQYML-HE--RKFIKKDPEHNVKFYN-EQLNESQRDAIQHSLSNEISIIHGPPGTGKT 230
L +L H+ F+K ++ N +LN SQ +A++ LS +S+I GPPGTGKT
Sbjct: 362 FLYHKLLGHDIPPSFLKPKLPSDLSVPNLPKLNASQSEAVRAVLSKPLSLIQGPPGTGKT 421
Query: 231 YTLVELIKQLYDRGER-------ILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLL 283
T ++ L R +LVC PSN++VD + E++ + G ++R+ SR
Sbjct: 422 VTSASVVYHLATMQSRKRKSHSPVLVCAPSNVAVDQLAEKIHRT--GLRVVRVAAKSR-- 477
Query: 284 PQVLSHSLDVLSKKGDSGMILKDIMK--EIDDTIASVKKLKSSRDRKKGWQEVKALRKEL 341
+ + S+ LS L + +K + + + + KL+S + + Q+ K LR +
Sbjct: 478 -EDIESSVSFLS--------LHEQIKNYKFNPELQRLLKLRSENN-ELSIQDEKKLRILV 527
Query: 342 RQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIP 401
EK ++ + ++ CT G+ R + S Y F +++IDE +Q+ EP+C IP
Sbjct: 528 AAAEKE----LLRAAHVICCTCVGAGDRRI-SKYK-----FRSVLIDEATQASEPECMIP 577
Query: 402 LISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRL-LSTTVFDRLLQHYGNEFKYLLNV 460
L+ K ++++ GD +QL P + N KV LS ++F+RL+ + F+ L V
Sbjct: 578 LVLGAK----QVVLVGDHQQLGPVVM---NKKVALASLSQSLFERLIILGNSPFR--LVV 628
Query: 461 QYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPE 520
QYRM+ + +F SN Y+G L+ + ++++ + FP I D+ +
Sbjct: 629 QYRMHPCLSEFPSNTFYEGTLQNGVTTSERIAR---------HVDFPWIQPDSPLMFYAN 679
Query: 521 RSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKK 580
E + + F N EA V +++ V E IG+++PY+ Q S + +
Sbjct: 680 FGQEELSASGTSF------LNRTEASTCEKIVTTFLRSNVLPEQIGIVTPYDGQRSYIVQ 733
Query: 581 LIHEK-------HQAIEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTR 633
+ ++A+E+++VD FQGREK+ IILS VRS+E+ +GF+ D RRLNVA+TR
Sbjct: 734 YMQNNGSMQKDLYKAVEVASVDAFQGREKDFIILSCVRSSEHQGIGFVNDPRRLNVALTR 793
Query: 634 PKRQLCVIGNMEMLSR 649
K + V+GN ++L++
Sbjct: 794 AKYGVIVLGNPKVLAK 809
>YMR080c [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 971
Score = 189 bits (481), Expect = 9e-48
Identities = 160/519 (30%), Positives = 255/519 (48%), Gaps = 81/519 (15%)
Query: 154 TYKRMQSTMRKLA-EFNSIPDNILIQYMLHERKFIKKD----PEHNVKFYNEQLNESQRD 208
+Y RMQ ++K A + SI + + + H+ I D E ++ + QLN SQ +
Sbjct: 357 SYDRMQDALKKFAIDKKSISGYLYYKILGHQVVDISFDVPLPKEFSIPNF-AQLNSSQSN 415
Query: 209 AIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYD-RGERILVCGPSNISVDTILERLSKV 267
A+ H L +S+I GPPGTGKT T ++ L +RILVC PSN++VD + +L +
Sbjct: 416 AVSHVLQRPLSLIQGPPGTGKTVTSATIVYHLSKIHKDRILVCAPSNVAVDHLAAKLRDL 475
Query: 268 VPGDELLRIGHPSR--LLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKKLKSSR 325
G +++R+ SR + V + +L L +G G LK+++K D+ V +L +S
Sbjct: 476 --GLKVVRLTAKSREDVESSVSNLALHNLVGRGAKGE-LKNLLKLKDE----VGELSAS- 527
Query: 326 DRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTL 385
+ K K +R+ E I+ K+ +V CT G+ + L F T+
Sbjct: 528 -------DTKRFVKLVRKTE----AEILNKADVVCCTCVGAGDKRL-------DTKFRTV 569
Query: 386 IIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDR 445
+IDE +Q+ EP+C IP++ K ++I+ GD +QL P I + L ++F+R
Sbjct: 570 LIDESTQASEPECLIPIVKGAK----QVILVGDHQQLGPVIL--ERKAADAGLKQSLFER 623
Query: 446 LLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESNDNTT 505
L+ L VQYRMN + +F SN Y+G L+ ++ ++ + N+
Sbjct: 624 LISL--GHVPIRLEVQYRMNPYLSEFPSNMFYEGSLQNGVTIEQRTV---------PNSK 672
Query: 506 FP--------CIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIK 557
FP W + ++ +S N EA + +L +
Sbjct: 673 FPWPIRGIPMMFWANYGREEISANG--------------TSFLNRIEAMNCERIITKLFR 718
Query: 558 AGVTEESIGVISPYNSQ-------VSLLKKLIHEKHQAIEISTVDGFQGREKECIILSLV 610
GV E IGVI+PY Q + + L + + +E+++VD FQGREK+ IILS V
Sbjct: 719 DGVKPEQIGVITPYEGQRAYILQYMQMNGSLDKDLYIKVEVASVDAFQGREKDYIILSCV 778
Query: 611 RSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
R+NE +GFL+D RRLNV +TR K L ++GN L+R
Sbjct: 779 RANEQQAIGFLRDPRRLNVGLTRAKYGLVILGNPRSLAR 817
>SPAC6G9.10c [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1687
Score = 187 bits (474), Expect = 6e-47
Identities = 171/576 (29%), Positives = 273/576 (46%), Gaps = 101/576 (17%)
Query: 144 LCLLKTTNTITYKRMQSTMRKLAEFNSIPDNILIQYMLHERKFIKKDPEHNVKFYNEQLN 203
L LK TN T+ R + +R L F+ D I + K + + +K Y Q+N
Sbjct: 1074 LWFLKLTNLATFTRQYAGIRGLPYFHLADDIIRARPCSQPVKHSSSEIKAAMKRY--QVN 1131
Query: 204 ESQRDAIQHSLSNE-ISIIHGPPGTGKTYTLVELIKQLY------------------DRG 244
E Q AI +L N ++I GPPGTGKT T++ +I L +
Sbjct: 1132 EPQAKAIMCALDNNGFTLIQGPPGTGKTKTIIGIISALLVDLSRYHITRPNQQSKSTESK 1191
Query: 245 ERILVCGPSNISVDTILERLS---------KVVPGDELLRIGHPSRLLPQVLSHSLDVLS 295
++IL+C PSN +VD +L RL K +P ++RIG+P + V SL+ +
Sbjct: 1192 QQILLCAPSNAAVDEVLLRLKRGFLLENGEKYIP--RVVRIGNPETINVSVRDLSLEYQT 1249
Query: 296 KKG---------DSGMI----------------LKDIMKEID-------DTIASVKKLKS 323
+K D G + ++++ K+ID DT + K+L++
Sbjct: 1250 EKQLLEVNQGAIDLGSLQELTRWRDTFYDCIQKIEELEKQIDVARDVAEDTKSLGKELQN 1309
Query: 324 SRDRKK-GWQEVKALRKELRQREKSGLI------NIILKSKIVVCTLHGSSSRELLSAYD 376
+ K Q+V+ L+ + + K + ILK VVC S +L++
Sbjct: 1310 KINEKNLAEQKVEELQSQSFTKNKEVDLLRKKAQKAILKQADVVCATLSGSGHDLVAHSS 1369
Query: 377 LQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKR 436
L F+T+IIDE +Q++E IPL + ++ I+ GD QLPPT+ ++ +
Sbjct: 1370 LN---FSTVIIDEAAQAVELDTIIPL----RYGAKKCILVGDPNQLPPTVLSKKAASLN- 1421
Query: 437 LLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLP 496
S ++F R+ +++ N+ LL++QYRM+ +I F S + YD +L+ D++A++
Sbjct: 1422 -YSQSLFVRIQKNFSNQM-CLLSIQYRMHPDISHFPSKKFYDSRLEDGDNMAEKTQQVW- 1478
Query: 497 GVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLI 556
+ N F T+ F R E ++ ++L +Y N L +
Sbjct: 1479 ----HVNPKF------TQYRLFDVRGKERTSNTMSTYNLEEVEYLVNMVDELLNKFPDVN 1528
Query: 557 KAGVTEESIGVISPYNSQVSLLKKLIHEKH-----QAIEISTVDGFQGREKECIILSLVR 611
G IGVI+PY SQ+ L++ K+ I+I TVDGFQG+EK+ I S V+
Sbjct: 1529 FTG----RIGVITPYRSQLHELRRAFKVKYGKSFMSTIDIQTVDGFQGQEKDIIFFSCVK 1584
Query: 612 SNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEML 647
S +GFL+D RRLNVA+TR + L +IGNME L
Sbjct: 1585 SYSKHGIGFLRDFRRLNVALTRARSSLLIIGNMETL 1620
>Hs18375673 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1118
Score = 182 bits (463), Expect = 1e-45
Identities = 153/512 (29%), Positives = 257/512 (49%), Gaps = 65/512 (12%)
Query: 154 TYKRMQSTMRKLA-EFNSIPDNILIQYMLHERKFIKKDPEHNVKFYNE---QLNESQRDA 209
++ RMQS ++ A + S+ I + + HE + + + +F + LN SQ A
Sbjct: 419 SFDRMQSALKTFAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYA 478
Query: 210 IQHSLSNEISIIHGPPGTGKTYTLVELIKQLYDRGER-ILVCGPSNISVDTILERLSKVV 268
++ L +S+I GPPGTGKT T ++ L +G +LVC PSNI+VD + E++ +
Sbjct: 479 VKTVLQRPLSLIQGPPGTGKTVTSATIVYHLARQGNGPVLVCAPSNIAVDQLTEKIHQT- 537
Query: 269 PGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKKLKSSRDRK 328
G +++R+ SR + + + L+ L + ++ +D ++ ++KL+ +D
Sbjct: 538 -GLKVVRLCAKSR---EAIDSPVSFLA--------LHNQIRNMD-SMPELQKLQQLKDET 584
Query: 329 KGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIID 388
+ A K R +++ +++ + ++ CT G+ L F +++ID
Sbjct: 585 G--ELSSADEKRYRALKRTAERELLMNADVICCTCVGAGDPRLAKMQ------FRSILID 636
Query: 389 EVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQ 448
E +Q+ EP+C +P++ K +LI+ GD QL P + + K LS ++F+RL+
Sbjct: 637 ESTQATEPECMVPVVLGAK----QLILVGDHCQLGPVVMCKKAAKAG--LSQSLFERLVV 690
Query: 449 HYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLK----ADDSVAKQLLADLPGVESNDNT 504
+ L VQYRM+ + F SN Y+G L+ A D V K P +
Sbjct: 691 LGIRPIR--LQVQYRMHPALSAFPSNIFYEGSLQNGVTAADRVKKGFDFQWPQPDK---- 744
Query: 505 TFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEES 564
P + T+G + S +S N EA +L+KAG +
Sbjct: 745 --PMFFYVTQGQEEIASSG-------------TSYLNRTEAANVEKITTKLLKAGAKPDQ 789
Query: 565 IGVISPYNSQVSLLKKL------IHEK-HQAIEISTVDGFQGREKECIILSLVRSNENFE 617
IG+I+PY Q S L + +H K +Q +EI++VD FQGREK+ IILS VR+NE+
Sbjct: 790 IGIITPYEGQRSYLVQYMQFSGSLHTKLYQEVEIASVDAFQGREKDFIILSCVRANEHQG 849
Query: 618 VGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
+GFL D RRLNVA+TR + + ++GN + LS+
Sbjct: 850 IGFLNDPRRLNVALTRARYGVIIVGNPKALSK 881
>CE19303 [L] KOG1803 DNA helicase
Length = 693
Score = 181 bits (459), Expect = 3e-45
Identities = 133/465 (28%), Positives = 236/465 (50%), Gaps = 51/465 (10%)
Query: 193 HNVKFYN--EQLNESQRDAIQHSLSNEISI--IHGPPGTGKTYTLVELIKQLYDRGERIL 248
H+ K N E LN SQ A+ +++ + ++ I GPPGTGKT + E++ QL + +++L
Sbjct: 228 HDRKIGNLPETLNPSQVAAVSAAMNTQRNLLCIQGPPGTGKTRVIAEIVHQLMKKKKKVL 287
Query: 249 VCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIM 308
VC P++++V ++ + G +P+ +K + + L
Sbjct: 288 VCAPTHVAVRNAMDATT-----------GRMIEEMPE----------EKAEQQLCLLANT 326
Query: 309 KEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQRE---KSGLINIILKSKIVVCTLHG 365
K+ S KL+ + + L K++ ++ + I K+ V + G
Sbjct: 327 KDEFQNHKSASKLEEIKKQLSTMSTSDPLYKKMSYEYYLIRNSIFRSIFYPKLAVFSTLG 386
Query: 366 SSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPT 425
+SS + L Y + + +I+DE +Q EP W+P+++ ++LI+ GD KQLP
Sbjct: 387 TSSIQKLPEYHWNA---DVMIVDEAAQCTEPATWVPVLT--TPSCKKLILVGDQKQLPAV 441
Query: 426 IKTEDNDKVKRLLSTTVFDRLLQHYG-NEFKYLLNVQYRMNEEIMQFSSNELYDGKLKAD 484
+ ++ K LS + ++L + + N LLN QYRMN++IM +S+ Y+ +L A
Sbjct: 442 VLSDKAMKGNFKLS--LMEKLAEEFSSNNINILLNEQYRMNKKIMNWSNEVFYENQLTAH 499
Query: 485 DSVAKQLLADL-PGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNEN 543
+V+ L D+ P + + P + ++ E + +RS E S N +
Sbjct: 500 STVSDITLRDICPNLPEDHVLNNPIMMINME--NVKDRSHEEFES--------HSFTNTD 549
Query: 544 EAYLALYHVEQLI-KAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGREK 602
E L +V +L+ G+ ++I VISPY +Q+ L++ I + ++++TVD FQG E+
Sbjct: 550 ELNLVTEYVNRLVVDLGINPKAIAVISPYYAQIEKLRRSIPFR---VDVNTVDAFQGHER 606
Query: 603 ECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEML 647
+ +I LVR N+ ++GFL + RRLNVA+TR +RQ +IGN M+
Sbjct: 607 QVVIFCLVRDNDEGQIGFLNETRRLNVAVTRARRQFVLIGNGRMM 651
>At5g47010 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1235
Score = 176 bits (447), Expect = 8e-44
Identities = 150/516 (29%), Positives = 254/516 (49%), Gaps = 71/516 (13%)
Query: 154 TYKRMQSTMRKLA-EFNSIPDNILIQYMLHE--RKFIKKDPEHNVKFYN-EQLNESQRDA 209
++ RMQ M+ A + S+ I Q + HE + ++ +LN SQ +A
Sbjct: 434 SFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRRFGVPGLPELNASQVNA 493
Query: 210 IQHSLSNEISIIHGPPGTGKTYTLVELIKQLYDRGE-RILVCGPSNISVDTILERLSKVV 268
++ L IS+I GPPGTGKT T ++ + +G+ ++LVC PSN++VD + E++S
Sbjct: 494 VKSVLQKPISLIQGPPGTGKTVTSAAIVYHMAKQGQGQVLVCAPSNVAVDQLAEKIS--A 551
Query: 269 PGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKKLK------ 322
G +++R+ SR + +S ++ L+ ++ + + +++LK
Sbjct: 552 TGLKVVRLCAKSR---EAVSSPVEYLTLHYQ----VRHLDTSEKSELHKLQQLKDEQGEL 604
Query: 323 SSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKLF 382
SS D KK +A +E+ Q + ++ CT G++ L + F
Sbjct: 605 SSSDEKKYKNLKRATEREITQ-----------SADVICCTCVGAADLR------LSNFRF 647
Query: 383 NTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTV 442
++IDE +Q+ EP+C IPL+ +K ++++ GD QL P I + + L+ ++
Sbjct: 648 RQVLIDESTQATEPECLIPLVLGVK----QVVLVGDHCQLGPVIMCK--KAARAGLAQSL 701
Query: 443 FDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLA--DLPGVES 500
F+RL+ + L VQYRM+ + +F SN Y+G L+ ++ ++ D P
Sbjct: 702 FERLVTLGIKPIR--LQVQYRMHPALSEFPSNSFYEGTLQNGVTIIERQTTGIDFPWPVP 759
Query: 501 NDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGV 560
N P + G + S +S N EA V +K+GV
Sbjct: 760 NR----PMFFYVQLGQEEISASG-------------TSYLNRTEAANVEKLVTAFLKSGV 802
Query: 561 TEESIGVISPYNSQVSLL-------KKLIHEKHQAIEISTVDGFQGREKECIILSLVRSN 613
IGVI+PY Q + + L + ++ IE+++VD FQGREK+ IILS VRSN
Sbjct: 803 VPSQIGVITPYEGQRAYIVNYMARNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSN 862
Query: 614 ENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
E+ +GFL D RRLNVA+TR + + ++GN ++LS+
Sbjct: 863 EHQGIGFLNDPRRLNVALTRARYGIVILGNPKVLSK 898
>YER176w [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1121
Score = 175 bits (444), Expect = 2e-43
Identities = 164/596 (27%), Positives = 275/596 (45%), Gaps = 95/596 (15%)
Query: 125 LAVDESKDQDAVQLYSFNRLCLLKTTNTITYKRMQS---TMRKLAEFNSIPDNILIQYML 181
L++ K V+L+S+N L L + +K + + T R L I + I +L
Sbjct: 569 LSIQRGKYVLLVELFSWNNLSLPTKNGSSQFKLLPTSAQTSRILFAMTRITNPKFIDLLL 628
Query: 182 HERKFIKKDPEHNVKFYNEQLNESQRDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLY 241
++ + ++ +KF +++LN SQ+ A++H L+N I+I+ GPPGTGKT T+ E+I Q+
Sbjct: 629 GQKPIKEIYFDNRLKFSSDKLNRSQKTAVEHVLNNSITILQGPPGTGKTSTIEEIIIQVI 688
Query: 242 DRGER--ILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGD 299
+R IL SNI++D I E++ + P ++LRI + H L +
Sbjct: 689 ERFHAFPILCVAASNIAIDNIAEKIMENRPQIKILRILSKKKEQQYSDDHPLGEICLHNI 748
Query: 300 SGMILKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLIN-IILKSKI 358
L M+ + + + + S D K +EK+ + N ++ +S+I
Sbjct: 749 VYKNLSPDMQVVANKTRRGEMISKSEDTK-------------FYKEKNRVTNKVVSQSQI 795
Query: 359 VVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGD 418
+ T + REL K +I+DE +QS E +PL ++ + GD
Sbjct: 796 IFTTNIAAGGRELKVI-----KECPVVIMDEATQSSEASTLVPL---SLPGIRNFVFVGD 847
Query: 419 DKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYD 478
+KQL L T++F+R+L + + +L+ QYRM+ +I +F ++Y+
Sbjct: 848 EKQLSSFSNIPQ-------LETSLFERVLSNGTYKNPLMLDTQYRMHPKISEFPIKKIYN 900
Query: 479 GKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTE-GDDFPERSDENDNDADDKFHLVS 537
G+LK D V + A PGV+ P + + G + RS + D +V
Sbjct: 901 GELK--DGVTDEQKA-WPGVQ------HPLFFYQCDLGPESRVRSTQRD--------IVG 943
Query: 538 SKYNENEAYLALYHVEQLIKAG--VTEESIGVISPYNSQVSLLKKLI------------- 582
Y + + + Q++ V E IGVI+PY++Q LL ++
Sbjct: 944 FTYENKHECVEIVKIIQILMLDKKVPLEEIGVITPYSAQRDLLSDILTKNVVINPKQISM 1003
Query: 583 HEKHQAIE--------------------------ISTVDGFQGREKECIILSLVRSNENF 616
+++ IE ++TVD FQG EK II S VR+N
Sbjct: 1004 QQEYDEIELFNAAGSQGTAGSLQNNVINIINGLHVATVDSFQGHEKSFIIFSCVRNNTEN 1063
Query: 617 EVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRVPFLNRWVLWVESGFEVIYPD 672
++GFL+D+RRLNVA+TR K L V+GN +L R P ++ ++E EVI+ D
Sbjct: 1064 KIGFLRDKRRLNVALTRAKHGLIVVGNKNVL-RKGDPLWKDYITYLEEQ-EVIFTD 1117
>CE28367 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 1069
Score = 172 bits (437), Expect = 1e-42
Identities = 152/522 (29%), Positives = 247/522 (47%), Gaps = 80/522 (15%)
Query: 151 NTITYKRMQSTMRKLAEFNSIPDNILIQYMLH---ERKFIKKDPEHNVKFYN-EQLNESQ 206
N T++R + L + L Q +L E +K D + +LN SQ
Sbjct: 391 NATTFERQYKALAALLNDSKAISPYLYQKLLGHPAEEMMLKFDLPRRLSVAGLPELNSSQ 450
Query: 207 RDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYDRGE-RILVCGPSNISVDTILERLS 265
A++ L+ +S+I GPPGTGKT ++ L + E +LVC PSNI+VD + E++
Sbjct: 451 MQAVKQVLTRPLSLIQGPPGTGKTVVSATIVYHLVQKTEGNVLVCSPSNIAVDHLAEKIH 510
Query: 266 KVVPGDELLRI-----GHPSRLLPQV-LSHSLDVLSKKGDSGMILKDIMKEIDDTIASVK 319
K G +++R+ H +P + L H L V+ A ++
Sbjct: 511 KT--GLKVVRLCARSREHSETTVPYLTLQHQLKVMGG-------------------AELQ 549
Query: 320 KLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQS 379
KL +D + LR +R K ++ + ++ CT ++ L S
Sbjct: 550 KLIQLKDEAGELEFKDDLRYMQLKRVKEH--ELLAAADVICCTCSSAADARL-------S 600
Query: 380 KL-FNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLL 438
K+ T++IDE +Q+ EP+ ++ + +++L++ GD QL P + + L
Sbjct: 601 KIRTRTVLIDESTQATEPE----ILVSIMRGVRQLVLVGDHCQLGPVVICK--KAAIAGL 654
Query: 439 STTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGV 498
S ++F+RL+ F+ L VQYRM+ + +F SN YDG L+ GV
Sbjct: 655 SQSLFERLVLLGIRPFR--LQVQYRMHPVLSEFPSNVFYDGSLQ-------------NGV 699
Query: 499 ESNDNTTFPCIWLDTEGDDFPERSDE----NDNDADDKFHLVSSKYNENEAYLALYHVEQ 554
ND W +P+ + + + +++ +S N EA V +
Sbjct: 700 TENDRHMTGVDW------HWPKPNKPAFFWHCSGSEELSASGTSFLNRTEAANVEKLVSK 753
Query: 555 LIKAGVTEESIGVISPYNSQVSLLKKLIHEK-------HQAIEISTVDGFQGREKECIIL 607
LIKAGV IGVI+PY Q S + +H + ++ +EI++VD FQGREK+ II+
Sbjct: 754 LIKAGVQPHQIGVITPYEGQRSFIVNYMHTQGTLNSKLYENVEIASVDAFQGREKDYIIV 813
Query: 608 SLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
+ VRSN+ +GFL D RRLNVA+TR K L ++GN ++L+R
Sbjct: 814 TCVRSNDILGIGFLSDPRRLNVAITRAKYGLVLVGNAKVLAR 855
>SPBC29A10.10c [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1944
Score = 167 bits (422), Expect = 6e-41
Identities = 155/516 (30%), Positives = 244/516 (47%), Gaps = 98/516 (18%)
Query: 202 LNESQRDAIQHSLSNE-ISIIHGPPGTGKTYTLVELIKQLYDRGE--------------- 245
+NE Q AI S N+ ++I GPPGTGKT T++ +I +
Sbjct: 1271 VNEPQAYAIYASSVNDGFTLIQGPPGTGKTKTILGMIGAVLTSSSQGLQFNVPGQTRKTS 1330
Query: 246 --RILVCGPSNISVDTILERLSKVVPGDE-------LLRIGHPSRL--------LPQVLS 288
+IL+C PSN ++D IL R+ V E ++R+G + L + +
Sbjct: 1331 KNKILICAPSNAAIDEILLRIKAGVYDHEGIKFFPKVIRVGFGDSISVHAKEFTLEEQMI 1390
Query: 289 HSLDVLSKK--------GDSGMILKDIMKEIDDTIASVKKLKSS-----------RDRKK 329
+++ + K D+ I+K+ D ++K +S+ R+ K
Sbjct: 1391 KQMELTNLKKDQEANNSSDTRKKYDSIIKKRDSLREDLEKFRSTGKNSSILEAQLREITK 1450
Query: 330 GWQEVKALRKELRQREKSGLINI-ILKSKI---------VVCTLHGSSSRELLSAYDLQS 379
++ ++R+R++S N+ +LK +I +VC +S ELL L
Sbjct: 1451 QKNMLEQSLDDMRERQRSTNRNLDVLKKQIQNQLLQEADIVCATLSASGHELLLNAGLT- 1509
Query: 380 KLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLS 439
F T+IIDE +Q++E IPL K + ++ GD QLPPT+ ++ + K S
Sbjct: 1510 --FRTVIIDEAAQAVELSSIIPL----KYGCESCVMVGDPNQLPPTVLSKTSAKFG--YS 1561
Query: 440 TTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVE 499
+++ R+ + + NE LL++QYRMN EI +F S Y+ KL L G
Sbjct: 1562 QSLYVRMFKQH-NESACLLSIQYRMNPEISRFPSKFFYNSKL-------------LDGPN 1607
Query: 500 SNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAG 559
+ T+ P W + + + +A F S YN EA L E+LI+
Sbjct: 1608 MSAVTSRP--WHEDPQLGIYRFFNVHGTEA---FSNSKSLYNVEEASFILLLYERLIQCY 1662
Query: 560 VT---EESIGVISPYNSQVSLLKKLIHEKHQAI-----EISTVDGFQGREKECIILSLVR 611
+ E IGV++PY SQV L+ K+ +I +I TVDGFQG+EK+ II S VR
Sbjct: 1663 LNIDFEGKIGVVTPYRSQVQQLRSQFQRKYGSIIFKHLDIHTVDGFQGQEKDIIIFSCVR 1722
Query: 612 SNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEML 647
S+ + +GFL+D RRLNVA+TR K L ++GN + L
Sbjct: 1723 SSMSGGIGFLQDLRRLNVALTRAKSSLYIVGNSKPL 1758
>ECU10g1640 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 782
Score = 161 bits (408), Expect = 3e-39
Identities = 134/446 (30%), Positives = 222/446 (49%), Gaps = 65/446 (14%)
Query: 201 QLNESQRDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYDR-GERILVCGPSNISVDT 259
+LN SQ A++ +L ++++I GPPGTGKT ++ L G ++LV PSN +VD
Sbjct: 344 KLNASQEVAVRAALGRKVTLIQGPPGTGKTLVSSAIVYNLVRHYGGKVLVVAPSNTAVDQ 403
Query: 260 ILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVK 319
+ ++ K G +LR V+S++ + G + + + + ++
Sbjct: 404 LTLKIHKT--GLRVLR-----------------VMSRRREYGQSDVSFLS-LHENLRELQ 443
Query: 320 KLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQS 379
+ + +D + E+ + K L+N +++++ CT +S +++ + +
Sbjct: 444 EGRKRKDEDHSRYD-SIYNDEVNESLKKQLLN---QAEVITCTCV-TSGQKMFNRFK--- 495
Query: 380 KLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRL-L 438
F+ ++IDE QS EP IPL+ K +L++ GD KQL PTI + KV +
Sbjct: 496 --FHCVLIDEAVQSTEPLSLIPLVYGCK----KLVLVGDHKQLGPTILCK---KVAQAGF 546
Query: 439 STTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGV 498
++F+RL+ Y+L+VQYRM+ ++ ++ S Y+G+L + +P
Sbjct: 547 KQSLFERLISI--GVVPYMLSVQYRMDADLCEWPSEMFYNGELLTGGKNFCRFDLGIPV- 603
Query: 499 ESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKA 558
N + C G + S +S N+ EA + L K
Sbjct: 604 ----NFFYVCY-----GREEVSASG-------------TSFVNQAEALYCESIIRHLFKC 641
Query: 559 GVTEESIGVISPYNSQVS-LLKKLIHEKHQAIEISTVDGFQGREKECIILSLVRSNENFE 617
GVTE IGVI+PY Q S +L ++ + +EIS VDGFQGREK+ II+SLVRSN
Sbjct: 642 GVTESQIGVITPYEGQRSYILNRIFGAEPGNLEISNVDGFQGREKDFIIVSLVRSNLYQG 701
Query: 618 VGFLKDERRLNVAMTRPKRQLCVIGN 643
+GF+ D+RR+NV +TR K L +IGN
Sbjct: 702 IGFVGDKRRMNVTLTRAKHGLVIIGN 727
>ECU05g1110 [L] KOG1803 DNA helicase
Length = 563
Score = 160 bits (404), Expect = 8e-39
Identities = 145/526 (27%), Positives = 242/526 (45%), Gaps = 113/526 (21%)
Query: 139 YSFNRLCLLKTTNTITYKRMQSTMRKLAEFNSIPDNILIQYMLHERKFIKKDPEHNVK-- 196
Y F + LK N I ++ + +F+ D I+ + ++E + +VK
Sbjct: 105 YDFEAVLDLKHNNRILLDNLERFVESRRDFS---DAIVETWRMNEEWGCPEKDVWDVKKS 161
Query: 197 ---------FYNEQLNESQRDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYDRGERI 247
FY+ LN SQR A++ I GPPGTGKT T+VE+I QL +
Sbjct: 162 IAAETSDLNFYDSSLNSSQRSAVEMLGCRTPYKILGPPGTGKTRTVVEIISQLLAANSSV 221
Query: 248 LVCGPSNISVDTILERLSK----VVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMI 303
LVCGPSN+SVD I+ER + + R+G ++ L + +LD L++
Sbjct: 222 LVCGPSNVSVDNIIERFLRSRYFLCNQPSFYRLGSSTKGLSHL---NLDFLAESHTK--- 275
Query: 304 LKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTL 363
MKE +KG ++ R++LR+R++ + S +V TL
Sbjct: 276 ---FMKE-----------------EKG---DRSFRRDLRERQRKFVEEKQANSPVVFATL 312
Query: 364 HGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLP 423
S + + F+ +++DE Q+ E + ++ ++ + I+ GD QL
Sbjct: 313 FSSLK---------EKRKFDWVLVDEACQASEAESFLAVVKG-----RAFILVGDPMQLC 358
Query: 424 PTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKA 483
P E + + L T+ LLN QYRM ++++FS+ Y G++K+
Sbjct: 359 P----ETSSLYESLALPTM--------------LLNEQYRMPSDLLRFSNEVFYRGQVKS 400
Query: 484 DDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNEN 543
+ +F +++DT+ + E SK N
Sbjct: 401 ATRECTPVF----------GKSF-ILFVDTQYFELYESGG-------------VSKSNIG 436
Query: 544 EAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGREKE 603
EA + + I + EE +G+I+PY SQV LL++++ +E+STVDGFQG+E++
Sbjct: 437 EA-----EIVRSIVGILKEEQVGIIAPYTSQVLLLREMVD-----VEVSTVDGFQGQERD 486
Query: 604 CIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
IIL+LVR N+ + GFL + +RLNVA+TR ++ L ++G+ R
Sbjct: 487 YIILTLVRCNDRDDFGFLDNGKRLNVALTRCRKGLVIVGDSRTFRR 532
>Hs20470741 [L] KOG1805 DNA replication helicase
Length = 1060
Score = 159 bits (401), Expect = 2e-38
Identities = 137/493 (27%), Positives = 229/493 (45%), Gaps = 95/493 (19%)
Query: 178 QYMLHERKFIKKDPEHNVKFYNEQLNESQRDAIQHSL-SNEISIIHGPPGTGKTYTLVEL 236
Q++ + + D + V + LN+ QR A++ L S + ++I G PGTGKT T+ L
Sbjct: 602 QFISYLSSVLPHDAKDTVACILKGLNKPQRQAMKKVLLSKDYTLIVGMPGTGKTTTICTL 661
Query: 237 IKQLYDRGERILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSK 296
++ LY G +L+ ++ +VD IL +L+K G LR+G ++ P + +
Sbjct: 662 VRILYACGFSVLLTSYTHSAVDNILLKLAKFKIG--FLRLGQIQKVHPAIQQFT------ 713
Query: 297 KGDSGMILKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKS 356
+ I K +KS L+ + S
Sbjct: 714 ---------------EQEICRSKSIKSL-----------------------ALLEELYNS 735
Query: 357 KIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIA 416
+++V T + + S K+F+ I+DE SQ +P C PL +R ++
Sbjct: 736 QLIVATTCMGINHPIFSR-----KIFDFCIVDEASQISQPICLGPLFFS-----RRFVLV 785
Query: 417 GDDKQLPPTIKTEDNDKVKRL-LSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNE 475
GD +QLPP + N + + L +S ++F RL Q+ + L VQYRMN +IM S+
Sbjct: 786 GDHQQLPPLVL---NREARALGMSESLFKRLEQNKSAVVQ--LTVQYRMNSKIMSLSNKL 840
Query: 476 LYDGKLKA-DDSVAKQLL------------------ADLPGVESNDNTTFPCIWLDTEGD 516
Y+GKL+ D VA ++ +D P + P +L+T+
Sbjct: 841 TYEGKLECGSDKVANAVINLRHFKDVKLELEFYADYSDNPWLMGVFEPNNPVCFLNTDKV 900
Query: 517 DFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVS 576
PE+ ++ N EA L ++ +KAG + IG+I+PY Q+
Sbjct: 901 PAPEQVEKGGVS------------NVTEAKLIVFLTSIFVKAGCSPSDIGIIAPYRQQLK 948
Query: 577 LLKKLIHEKHQAIEISTVDGFQGREKECIILSLVRSNENFEVG-FLKDERRLNVAMTRPK 635
++ L+ +E++TVD +QGR+K +++S VRSN++ VG LKD RRLNVA+TR K
Sbjct: 949 IINDLLARSIGMVEVNTVDKYQGRDKSIVLVSFVRSNKDGTVGELLKDWRRLNVAITRAK 1008
Query: 636 RQLCVIGNMEMLS 648
+L ++G + L+
Sbjct: 1009 HKLILLGCVPSLN 1021
>CE08664 [L] KOG1803 DNA helicase
Length = 633
Score = 158 bits (399), Expect = 3e-38
Identities = 135/475 (28%), Positives = 228/475 (47%), Gaps = 57/475 (12%)
Query: 203 NESQRDAIQHSLSN--EISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGPSNISVDTI 260
NE QR AI+ +L+ ++ I GPPGTGKT+TL L+ +L + ++++V P+ ++ I
Sbjct: 75 NEKQRTAIKMALNENRKLVCIQGPPGTGKTFTLTLLLCRLIQQKKQVVVLAPTREALANI 134
Query: 261 LERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKK 320
K + R+ +V H+L ++ +D++ + D + + ++
Sbjct: 135 RMMTKKTL-----------KRMGIKVHEHALMDTNE-------YRDVINKSDRALMAAEE 176
Query: 321 LKSSRDRKKGWQEVKALRKELRQREKSGLIN-----IILKSKIVVCTLHGSSSRELLSAY 375
++ R + + + E+RQ + + N +I ++ T+ S +
Sbjct: 177 VRDLRKAFDNGEITENVLDEMRQSIINRVRNEVGAEVIGNVRVAFATIGAS-----FVDF 231
Query: 376 DLQSKLFNTL--IIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDK 433
++ K F+ IIDE +Q +E Q W + M+R+++AGD KQLP + T D+
Sbjct: 232 VMKHKKFDPCLCIIDEAAQVMEAQTWPAVYK-----MKRIVMAGDPKQLPALVFT---DE 283
Query: 434 VKRL-LSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLL 492
K L +V DR+L+ N +L QYR N +I +S+ Y +LK D + L
Sbjct: 284 AKAFGLQNSVMDRILEKKNNFSWIMLENQYRSNAKIATWSNTCFYHNQLKTDVKCHEYSL 343
Query: 493 ADL--PGVESNDNTTFPCIWLDTEGDDFPERSDEN------DNDADDKFHLVSSKYNENE 544
+ P + N P + +DT + E+ E D ++ +K S N E
Sbjct: 344 HTILNPQPKKFRNLFDPLVLIDTSLERDVEKRLETYEHAVFDTNSINKTKQGFSYANLAE 403
Query: 545 AYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHE--------KHQAIEISTVDG 596
A +A+ H ++L+K GV I +I+PY Q SL+ KL+ E I TVD
Sbjct: 404 AKIAIGHYQRLLKYGVQPSDIAIITPYKGQTSLVTKLMEEFGAETGYTDFVQTTIGTVDS 463
Query: 597 FQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRCR 651
QG+E E +I ++VRSN +GF+ + RRLNV +TR KR IGN +L+ +
Sbjct: 464 VQGKEYEVVIFTMVRSNPRKTMGFVSELRRLNVVITRAKRHFMFIGNGYLLAESK 518
>Hs7662212 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 828
Score = 157 bits (398), Expect = 4e-38
Identities = 171/594 (28%), Positives = 268/594 (44%), Gaps = 128/594 (21%)
Query: 146 LLKTTNTITYKRMQSTMRKLAEFNSIPD-NILIQYMLHERK--FIKKD----PEHNVKFY 198
L + N I + +T RKL + + N L + +L+ F KD + Y
Sbjct: 22 LNELVNCIVISSLVTTQRKLKAMSLLGSRNQLARAVLNPNPMDFCTKDLLTTTSERIIAY 81
Query: 199 NEQLNESQRDAIQ-------HSLS-NEISIIHGPPGTGKTYTLVELIKQLYDRGE----- 245
NE Q+ AI+ HS S +I +IHGPPGTGK+ T+V L+ +L +
Sbjct: 82 LRDFNEDQKKAIETAYAMVKHSPSVAKICLIHGPPGTGKSKTIVGLLYRLLTENQRKGHS 141
Query: 246 -----------RILVCGPSNISVDTILERL---------SKVVP----GD-ELLRIGHPS 280
R+LVC PSN +VD +++++ K P GD L+R+G
Sbjct: 142 DENSNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKKNPLGNCGDINLVRLGPEK 201
Query: 281 RLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKKLKS---------SRDR---- 327
+ +VL SLD + + KE+ + ++ K K SR R
Sbjct: 202 SINSEVLKFSLD--------SQVNHRMKKELPSHVQAMHKRKEFLDYQLDELSRQRALCR 253
Query: 328 -----------------KKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRE 370
K QE+ + KE++ R + IIL+S I+ CTL S
Sbjct: 254 GGREIQRQELDENISKVSKERQELASKIKEVQGRPQKTQSIIILESHIICCTLSTSGGLL 313
Query: 371 LLSAYDLQSKL-FNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTI--- 426
L SA+ Q + F+ +I+DE QS E + PLI +LI+ GD KQLPPT+
Sbjct: 314 LESAFRGQGGVPFSCVIVDEAGQSCEIETLTPLIHR----CNKLILVGDPKQLPPTVISM 369
Query: 427 KTEDNDKVKRLLSTTVFDRLLQH--YGNEFKYL----LNVQYRMNEEIMQFSSNELYDGK 480
K ++ + +++ F RLL+ N L L VQYRM+ +I F SN +Y+
Sbjct: 370 KAQEYGYDQSMMAR--FCRLLEENVEHNMISRLPILQLTVQYRMHPDICLFPSNYVYNRN 427
Query: 481 LKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKY 540
LK + + + + F + GD S+ DND S
Sbjct: 428 LKTN--------RQTEAIRCSSDWPFQPYLVFDVGDG----SERRDND---------SYI 466
Query: 541 NENEAYLALYHVEQLIK---AGVTEESIGVISPYNSQVSLLKKLI---HEKHQAIEISTV 594
N E L + + +LIK V+ +IG+I+ Y +Q ++++K + ++ E+ TV
Sbjct: 467 NVQEIKLVM-EIIKLIKDKRKDVSFRNIGIITHYKAQKTMIQKDLDKEFDRKGPAEVDTV 525
Query: 595 DGFQGREKECIILSLVRSNE-NFEVGFLKDERRLNVAMTRPKRQLCVIGNMEML 647
D FQGR+K+C+I++ VR+N +GFL +RLNV +TR K L ++G++ L
Sbjct: 526 DAFQGRQKDCVIVTCVRANSIQGSIGFLASLQRLNVTITRAKYSLFILGHLRTL 579
>YLR430w [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 2231
Score = 156 bits (394), Expect = 1e-37
Identities = 149/536 (27%), Positives = 254/536 (46%), Gaps = 114/536 (21%)
Query: 201 QLNESQRDAIQHSLSNE-ISIIHGPPGTGKTYTLVELI---------------------- 237
+LN SQ +AI +S+S E S+I GPPGTGKT T++ +I
Sbjct: 1334 KLNTSQAEAIVNSVSKEGFSLIQGPPGTGKTKTILGIIGYFLSTKNASSSNVIKVPLEKN 1393
Query: 238 ----KQLYDRGERILVCGPSNISVDTILERLSKVVPGDE-------LLRIGHPSRLLPQV 286
+QL + ++IL+C PSN +VD I RL V + L+R+G + +
Sbjct: 1394 SSNTEQLLKK-QKILICAPSNAAVDEICLRLKSGVYDKQGHQFKPQLVRVGRSDVVNVAI 1452
Query: 287 LSHSLDVLSKK--GDSGMILK---DIMKEIDDTIASVKKLKSSRDRKKG-------WQEV 334
+L+ L K G+ ++ ++ ++ ++ + ++L+ D + G +++
Sbjct: 1453 KDLTLEELVDKRIGERNYEIRTDPELERKFNNAVTKRRELRGKLDSESGNPESPMSTEDI 1512
Query: 335 KALRKELRQ---------------REKSGL-------------INIILKSKIVVCTLHGS 366
L+ ++R+ REK+ + +I+ S I+ TL GS
Sbjct: 1513 SKLQLKIRELSKIINELGRDRDEMREKNSVNYRNRDLDRRNAQAHILAVSDIICSTLSGS 1572
Query: 367 SSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTI 426
+ ++L+ ++ F+T+IIDE Q E IPL + +R I+ GD QLPPT+
Sbjct: 1573 A-HDVLATMGIK---FDTVIIDEACQCTELSSIIPL----RYGGKRCIMVGDPNQLPPTV 1624
Query: 427 KTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDS 486
+ K + ++F R+ + N YLL+VQYRM+ I +F S+E Y G+LK D
Sbjct: 1625 LSGAASNFK--YNQSLFVRMEK---NSSPYLLDVQYRMHPSISKFPSSEFYQGRLK--DG 1677
Query: 487 VAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAY 546
+L P + + D R ++N S N E
Sbjct: 1678 PGMDILNKRPWHQLEPLAPYKFF------DIISGRQEQNAK--------TMSYTNMEEIR 1723
Query: 547 LALYHVEQLIKAGVTE----ESIGVISPYNSQVSLLKKLIHEK-----HQAIEISTVDGF 597
+A+ V+ L + + IG+ISPY Q+ ++K +++I+ +T+DGF
Sbjct: 1724 VAIELVDYLFRKFDNKIDFTGKIGIISPYREQMQKMRKEFARYFGGMINKSIDFNTIDGF 1783
Query: 598 QGREKECIILSLVRSNEN-FEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRV 652
QG+EKE I++S VR+++ VGFLKD RR+NVA+TR K + V+G+ L++ ++
Sbjct: 1784 QGQEKEIILISCVRADDTKSSVGFLKDFRRMNVALTRAKTSIWVLGHQRSLAKSKL 1839
>CE23725 [L] KOG1805 DNA replication helicase
Length = 1069
Score = 154 bits (390), Expect = 3e-37
Identities = 158/611 (25%), Positives = 276/611 (44%), Gaps = 99/611 (16%)
Query: 80 KELNTGSFKVGDIVLVQPSAKAKSKKDETVNLDAVVSKVSNNQIVLAVDESKDQDAVQLY 139
K NT +F+ GD+ L+ +KK + A++ +VS++Q ++ + K +
Sbjct: 532 KSSNTPTFRPGDVCLLS------NKKHIAIGF-ALIDEVSDDQQIVKISTDKTIKSRYEA 584
Query: 140 SFNRLCLLKTTNTITYKRMQSTMRKLAEFNSIPD---NILIQYM---LHERKFIKKDPEH 193
F+ L K T+ T+ + L + + I NIL+ + + + P
Sbjct: 585 PFH---LDKYTSMSTHSTTLGNLVYLLQNDEIGKRLRNILVDLLPPIIMDATGFNLTPAI 641
Query: 194 NVKFYNEQLNESQRDAIQHSLSNE-ISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGP 252
+LN QR A+ H+L+ E ++ G PG+GKT + LI+ L +++L+
Sbjct: 642 KKIIIKAKLNNEQRKAVVHALATEDFMMVEGLPGSGKTTLISVLIQCLVATNKKVLLAAF 701
Query: 253 SNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEID 312
++ +VD IL +L+K V +++LR+G S + KD +K++
Sbjct: 702 THSAVDNILTKLTKEVAAEKILRLGSSSSI----------------------KDDIKKMT 739
Query: 313 DTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELL 372
LK+ + + + A+RK ++ + IV CT H RELL
Sbjct: 740 --------LKAKLENETSEEYYAAVRKVMKT------------TPIVACTCH-HVPRELL 778
Query: 373 SAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDND 432
+Y + F+ +I+DE S LEP L+ + + + ++ GD KQL P + +
Sbjct: 779 FSY----RHFDVVIVDEASMVLEP-----LLLPVLATSNKFVLVGDCKQLTPLVVSRKAK 829
Query: 433 KVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLL 492
+ +ST ++L Q + L + QYRMN EI SS Y+ +L + +
Sbjct: 830 QEGAGIST--MEKLQQSHPGVVVSLTS-QYRMNREISVLSSKLFYENRLICGNESVSRSS 886
Query: 493 ADLPG---VESNDNTTF-----------PCIWLDTEGDDFPERSDENDNDADDKFHLVSS 538
D G V +D + C++LDT+ + E+
Sbjct: 887 LDRTGDYIVAMDDGSDHIRKALSGDIKDSCVFLDTQSTINSKMQCEDGEGG--------G 938
Query: 539 KYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQ 598
N+ EA L +Q + +GV IGV+S Y QV ++ +++ +E++T+D +Q
Sbjct: 939 MCNDGEAKLISELCQQFVMSGVKPHEIGVMSAYRRQVDHIRGILNSDE--LEVNTIDSYQ 996
Query: 599 GREKECIILSLVRSNENFEVG-FLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRVPFLNR 657
GREK II SL +N + + LKDERR+NVA+TR +++L V+G S +P L R
Sbjct: 997 GREKRVIIWSLTWTNNSTKKSELLKDERRVNVALTRARQKLVVVGCKN--SAETIPVLFR 1054
Query: 658 WVLWVESGFEV 668
+ +E+ +
Sbjct: 1055 FSQLIENHISI 1065
>CE02219 [L] KOG1805 DNA replication helicase
Length = 1105
Score = 154 bits (390), Expect = 3e-37
Identities = 158/611 (25%), Positives = 276/611 (44%), Gaps = 99/611 (16%)
Query: 80 KELNTGSFKVGDIVLVQPSAKAKSKKDETVNLDAVVSKVSNNQIVLAVDESKDQDAVQLY 139
K NT +F+ GD+ L+ +KK + A++ +VS++Q ++ + K +
Sbjct: 568 KSSNTPTFRPGDVCLLS------NKKHIAIGF-ALIDEVSDDQQIVKISTDKTIKSRYEA 620
Query: 140 SFNRLCLLKTTNTITYKRMQSTMRKLAEFNSIPD---NILIQYM---LHERKFIKKDPEH 193
F+ L K T+ T+ + L + + I NIL+ + + + P
Sbjct: 621 PFH---LDKYTSMSTHSTTLGNLVYLLQNDEIGKRLRNILVDLLPPIIMDATGFNLTPAI 677
Query: 194 NVKFYNEQLNESQRDAIQHSLSNE-ISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGP 252
+LN QR A+ H+L+ E ++ G PG+GKT + LI+ L +++L+
Sbjct: 678 KKIIIKAKLNNEQRKAVVHALATEDFMMVEGLPGSGKTTLISVLIQCLVATNKKVLLAAF 737
Query: 253 SNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEID 312
++ +VD IL +L+K V +++LR+G S + KD +K++
Sbjct: 738 THSAVDNILTKLTKEVAAEKILRLGSSSSI----------------------KDDIKKMT 775
Query: 313 DTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELL 372
LK+ + + + A+RK ++ + IV CT H RELL
Sbjct: 776 --------LKAKLENETSEEYYAAVRKVMKT------------TPIVACTCH-HVPRELL 814
Query: 373 SAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDND 432
+Y + F+ +I+DE S LEP L+ + + + ++ GD KQL P + +
Sbjct: 815 FSY----RHFDVVIVDEASMVLEP-----LLLPVLATSNKFVLVGDCKQLTPLVVSRKAK 865
Query: 433 KVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLL 492
+ +ST ++L Q + L + QYRMN EI SS Y+ +L + +
Sbjct: 866 QEGAGIST--MEKLQQSHPGVVVSLTS-QYRMNREISVLSSKLFYENRLICGNESVSRSS 922
Query: 493 ADLPG---VESNDNTTF-----------PCIWLDTEGDDFPERSDENDNDADDKFHLVSS 538
D G V +D + C++LDT+ + E+
Sbjct: 923 LDRTGDYIVAMDDGSDHIRKALSGDIKDSCVFLDTQSTINSKMQCEDGEGG--------G 974
Query: 539 KYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQ 598
N+ EA L +Q + +GV IGV+S Y QV ++ +++ +E++T+D +Q
Sbjct: 975 MCNDGEAKLISELCQQFVMSGVKPHEIGVMSAYRRQVDHIRGILNSDE--LEVNTIDSYQ 1032
Query: 599 GREKECIILSLVRSNENFEVG-FLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRVPFLNR 657
GREK II SL +N + + LKDERR+NVA+TR +++L V+G S +P L R
Sbjct: 1033 GREKRVIIWSLTWTNNSTKKSELLKDERRVNVALTRARQKLVVVGCKN--SAETIPVLFR 1090
Query: 658 WVLWVESGFEV 668
+ +E+ +
Sbjct: 1091 FSQLIENHISI 1101
>At1g08840 [L] KOG1805 DNA replication helicase
Length = 1296
Score = 146 bits (369), Expect = 9e-35
Identities = 141/478 (29%), Positives = 218/478 (45%), Gaps = 86/478 (17%)
Query: 187 IKKDPEHNVKFYNEQLNESQRDAIQHSLS-NEISIIHGPPGTGKTYTLVELIKQLYDRGE 245
+ +DP + + + LN QR AI L+ + ++I G PGTGKT T+V +K L RG
Sbjct: 873 LSQDPAISYIWSEKSLNNDQRQAILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGS 932
Query: 246 RILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILK 305
IL+ +N +VD +L +L G E LRIG
Sbjct: 933 SILLASYTNSAVDNLLIKLK--AQGIEFLRIGRDEA------------------------ 966
Query: 306 DIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHG 365
+ +E+ ++ S + S D KK +VK +V T G
Sbjct: 967 -VHEEVRESCFSAMNMCSVEDIKKKLDQVK----------------------VVASTCLG 1003
Query: 366 SSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPT 425
+S L++ + F+ IIDE Q P PL+ ++ GD QLPP
Sbjct: 1004 INSPLLVN------RRFDVCIIDEAGQIALPVSIGPLLF-----ASTFVLVGDHYQLPPL 1052
Query: 426 IKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADD 485
+++ + + + ++F RL + + L N QYRM IM+ S+ +Y +L
Sbjct: 1053 VQS--TEARENGMGISLFRRLSEAHPQAISVLQN-QYRMCRGIMELSNALIYGDRLCCGS 1109
Query: 486 SVAKQLLADLPGVESNDNTTFPCIWLD-----TEGDDFPERSDENDNDADDKFHLVSSKY 540
+ +AD V S ++T P WL T F +A D+ ++
Sbjct: 1110 AE----VADATLVLSTSSSTSP--WLKKVLEPTRTVVFVNTDMLRAFEARDQ----NAIN 1159
Query: 541 NENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGR 600
N EA + VE+L+ GV + IG+I+PYNSQ SL++ I +EI T+D +QGR
Sbjct: 1160 NPVEASIIAEIVEELVNNGVDSKDIGIITPYNSQASLIQHAI--PTTPVEIHTIDKYQGR 1217
Query: 601 EKECIILSLVRSNE---NFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRVPFL 655
+K+CI++S VRS E + L D R+NVA+TR K++L ++G+ LS RVP L
Sbjct: 1218 DKDCILVSFVRSREKPRSSASSLLGDWHRINVALTRAKKKLIMVGSQRTLS--RVPLL 1273
>7291108 [L] KOG1805 DNA replication helicase
Length = 1119
Score = 146 bits (368), Expect = 1e-34
Identities = 168/647 (25%), Positives = 282/647 (42%), Gaps = 120/647 (18%)
Query: 49 GLAINHLQLDNIRTGIGS----KLYLELSADPAITKELNTGSFKVGDIVLVQPSAKAKSK 104
G+AI HL+L + I + LEL + +++L+ F +G+ V++ +++
Sbjct: 506 GIAIRHLKLVKGQEVILEEGRYRQTLELGEEADPSRDLSLSGFDLGEYVVISSTSRLAVA 565
Query: 105 KDETVNLDAVVSKVSNNQIVLAVDESKDQDAVQLYSFNRLCLLKTTN----TITYKRMQS 160
V+++A +D ++D Q YS + K + T + +
Sbjct: 566 AGFIVSIEA-----------RRLDLRLERDLSQRYSEETFIIDKHDSQSFATFNFTNLGM 614
Query: 161 TMRKLAEFNSIPDNILIQYMLHERKFIKKDPEHNVKFYNEQLNESQRDAIQHSLSNEISI 220
+ + F + D I+ + + K + K LN+ Q++A +L+ +
Sbjct: 615 LLSEGERFQELRDIIVAKKPPEQHKVLPKIILTKGAPILLNLNKVQQNAALRALTTSSHL 674
Query: 221 -IHGPPGTGKTYTLVELIKQLYDRGERILVCGPSNISVDTILERLSKVVPGDELLRIGHP 279
I G PGTGKT TLV L++ L+ G+ +L+ ++ +VD ++ RL G ++R+G
Sbjct: 675 LIKGLPGTGKTQTLVALVRLLHLLGKSVLITAQTHSAVDNLIMRLLPF--GLPMMRLGSG 732
Query: 280 SRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRK 339
SR+ Q L++I +E + ++D K V+ L K
Sbjct: 733 SRIHKQ------------------LEEISEE-----------RLTKDCKT----VEELEK 759
Query: 340 ELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCW 399
L Q G V C G Q + F+ I+DE +Q L+P
Sbjct: 760 ALGQPSIVG----------VTCLGCGHPL--------FQRRQFDYCIVDEATQVLQPTVL 801
Query: 400 IPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLN 459
PLI + ++ GD +QLPP +++++ + R T+F RL +L+
Sbjct: 802 RPLIH-----CSKFVLVGDPEQLPPIVRSKEARQ--RGADETLFQRLDSEKATA---VLS 851
Query: 460 VQYRMNEEIMQFSSNELYDGKLK-ADDSVA-----KQLLADLPGVESNDNTTF--PCIWL 511
+QYRMN+ I + ++ Y G LK A D V+ +LL + P TT + L
Sbjct: 852 LQYRMNKTITRLANELTYGGDLKCASDEVSGARFEVELLNEAPRWVQRALTTHLEQAVTL 911
Query: 512 DTEGDDFP-------------------ERSDENDNDADDKF---HLVSSKYNENEAYLAL 549
GD E+S D D K VS N EA + +
Sbjct: 912 INTGDCLERCQEFVYASQRLVDTCSSIEQSFSEDKDEIRKLTSKKRVSKYTNYCEAGIVM 971
Query: 550 YHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGREKECIILSL 609
+ + L+K+G IGVI+PY +QV L KKL + +E +TVD FQGR+K II S
Sbjct: 972 HLLRYLLKSGYEASRIGVIAPYRAQVELFKKLASKLDTDLECNTVDQFQGRDKNLIIYSC 1031
Query: 610 VRSNENF-------EVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
++ +F E L+D+RRL VA+TR K +L ++G+++ L +
Sbjct: 1032 SKTGGDFSDMERSREAEILEDQRRLTVAITRAKNKLILLGDIKCLEQ 1078
>At1g05460 [A] KOG1804 RNA helicase
Length = 1002
Score = 144 bits (363), Expect = 4e-34
Identities = 133/450 (29%), Positives = 209/450 (45%), Gaps = 86/450 (19%)
Query: 220 IIHGPPGTGKTYTLVELIKQLY--DRGERILVCGPSNISVDTILERLSKV----VPGDEL 273
+IHGPPGTGKT TLVE I QLY R R+LVC PSN + D ILE+L + + +E+
Sbjct: 418 VIHGPPGTGKTMTLVEAIVQLYTTQRNARVLVCAPSNSAADHILEKLLCLEGVRIKDNEI 477
Query: 274 LRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKKLKSSRDRKKGWQE 333
R+ +R ++ + D+ I LK+
Sbjct: 478 FRLNAATRSYEEIKPEIIRFCF---------------FDELIFKCPPLKA---------- 512
Query: 334 VKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQS 393
+ + K+VV T +S LL+A + F +++DE Q+
Sbjct: 513 -------------------LTRYKLVVSTYMSAS---LLNAEGVNRGHFTHILLDEAGQA 550
Query: 394 LEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQ--HY- 450
EP+ I +S+L +++AGD +QL P I + D + + L + +RL + +Y
Sbjct: 551 SEPENMIA-VSNLCLTETVVVLAGDPRQLGPVIYSRDAESLG--LGKSYLERLFECDYYC 607
Query: 451 -GNE-FKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESNDNTTFPC 508
G+E + L YR + EI+ S YDG+L A +LA L + N FP
Sbjct: 608 EGDENYVTKLVKNYRCHPEILDLPSKLFYDGELVASKEDTDSVLASLNFLP---NKEFPM 664
Query: 509 IWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAG-VTEESIGV 567
++ +G D ER N S +N E + +++L V EE IGV
Sbjct: 665 VFYGIQGCD--EREGNNP-----------SWFNRIEISKVIETIKRLTANDCVQEEDIGV 711
Query: 568 ISPYNSQVSLLKKLIHEKHQA-IEISTVDGFQGREKECIILSLVRS-------NENFEVG 619
I+PY QV +K+++ +++ +V+ FQG+EK+ II+S VRS + + +G
Sbjct: 712 ITPYRQQVMKIKEVLDRLDMTEVKVGSVEQFQGQEKQVIIISTVRSTIKHNEFDRAYCLG 771
Query: 620 FLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
FL + RR NVA+TR L +IGN ++ +
Sbjct: 772 FLSNPRRFNVAITRAISLLVIIGNPHIICK 801
>7302834 [A] KOG1804 RNA helicase
Length = 765
Score = 143 bits (360), Expect = 1e-33
Identities = 136/459 (29%), Positives = 222/459 (47%), Gaps = 63/459 (13%)
Query: 203 NESQRDAIQHSLSNEIS----IIHGPPGTGKTYTLVELIKQ--LYDRGERILVCGPSNIS 256
N Q +A+Q ++ + I+ GPPGTGKT T+VE I Q L RILV SN +
Sbjct: 252 NAEQLEAVQRIVAGPSTQGPYILFGPPGTGKTTTIVEAILQLRLQQPQSRILVTAGSNSA 311
Query: 257 VDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIA 316
DTI +L + + + L+ + LP+ + V S + I ++ ++
Sbjct: 312 CDTIALKLCEYIESNIRLQEHFAQQKLPEPDHQLIRVYS---------RSIYEKGFASVP 362
Query: 317 SVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYD 376
S+ LK+S K + +KA R I+K I+V TL + L++
Sbjct: 363 SL-LLKNSNCSKSIYDHIKASR--------------IVKYGIIVATL--CTVARLVTDTL 405
Query: 377 LQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKR 436
+ F + IDE S EP+ I ++ ++ +I++GD KQL IK+ N
Sbjct: 406 GRYNFFTHIFIDEAGASTEPEALIGIMGIKQTADCHVILSGDHKQLGAVIKS--NRAASL 463
Query: 437 LLSTTVFDRLLQ----------HYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDS 486
LS ++ +RLLQ +Y + L YR + +I++ + Y+G+LKA
Sbjct: 464 GLSRSLMERLLQSDCYKSDENGNYDRNRQMRLCRNYRSHPQIVRLFNELYYNGELKAQAP 523
Query: 487 VAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAY 546
LA V +N FP I+ T G E++ +S YN EA
Sbjct: 524 AMDVNLAANWSVLTNPQ--FPIIFQATHGVTNREQNS-------------TSSYNNLEAE 568
Query: 547 LALYHVEQLIKAGVT-EESIGVISPYNSQVSLLKKLIHEK-HQAIEISTVDGFQGREKEC 604
+ ++V++LI V +E +G+++PY +Q L+ KL+ K + +E+ +V+ +QGREK
Sbjct: 569 VICWYVKRLINDRVVGQEDVGIVAPYTAQGKLVTKLLQSKGYPNVEVGSVETYQGREKTI 628
Query: 605 IILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGN 643
II SLV+S N +GF+ + RR+NV ++R K L ++GN
Sbjct: 629 IIASLVKSFTN--MGFMCNPRRVNVLLSRAKALLILVGN 665
>YHR164c [L] KOG1805 DNA replication helicase
Length = 1522
Score = 141 bits (355), Expect = 4e-33
Identities = 150/572 (26%), Positives = 248/572 (43%), Gaps = 101/572 (17%)
Query: 119 SNNQIVLAVDESKDQDAVQLYSFNRLCLLK---TTNTITYKRMQSTMRKLAEF---NSIP 172
+ N + +D++ Q ++ L FN L L + RK N I
Sbjct: 962 TQNLVTYRIDKNDIQQSLSLARFNLLSLFLPAVSPGVDIVDERSKLCRKTKRSDGGNEIL 1021
Query: 173 DNILIQYMLHERKFIKKDPEHNVKFYNEQ-LNESQRDAIQHSL-SNEISIIHGPPGTGKT 230
++L+ + + DP K + LN +Q++AI + + + ++I G PGTGKT
Sbjct: 1022 RSLLVDNRAPKFRDANDDPVIPYKLSKDTTLNLNQKEAIDKVMRAEDYALILGMPGTGKT 1081
Query: 231 YTLVELIKQLYDRGERILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHS 290
+ E+IK L G+R+L+ ++ +VD IL +L ++R+G ++ P +
Sbjct: 1082 TVIAEIIKILVSEGKRVLLTSYTHSAVDNILIKLRNT--NISIMRLGMKHKVHPDTQKYV 1139
Query: 291 LDVLSKKGDSGMILKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLI 350
+ S K D + +I+ T
Sbjct: 1140 PNYASVKS-----YNDYLSKINST------------------------------------ 1158
Query: 351 NIILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDM 410
+V T G + + L K F+ +I+DE SQ P PL
Sbjct: 1159 ------SVVATTCLGIND----ILFTLNEKDFDYVILDEASQISMPVALGPLRYG----- 1203
Query: 411 QRLIIAGDDKQLPPTIKTEDNDKVKRL--LSTTVFDRLLQHYGNEFKYLLNVQYRMNEEI 468
R I+ GD QLPP +K + RL L ++F + + L +QYRM +I
Sbjct: 1204 NRFIMVGDHYQLPPLVKND----AARLGGLEESLFKTFCEKHPESVAEL-TLQYRMCGDI 1258
Query: 469 MQFSSNELYDGKLKADDSVAKQLLADLPGVES----NDNTTFPCIWLDT----------- 513
+ S+ +YD KLK ++ +LP E+ + + WL+
Sbjct: 1259 VTLSNFLIYDNKLKCGNNEVFAQSLELPMPEALSRYRNESANSKQWLEDILEPTRKVVFL 1318
Query: 514 EGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNS 573
D+ P+ ++++ D + N EA L L VE ++ +GV E IGV++ Y +
Sbjct: 1319 NYDNCPDIIEQSEKD---------NITNHGEAELTLQCVEGMLLSGVPCEDIGVMTLYRA 1369
Query: 574 QVSLLKKLIHEK-HQAIEISTVDGFQGREKECIILSLVRSNENFEVG-FLKDERRLNVAM 631
Q+ LLKK+ ++ + +EI T D FQGR+K+CII+S+VR N G LK+ RR+NVAM
Sbjct: 1370 QLRLLKKIFNKNVYDGLEILTADQFQGRDKKCIIISMVRRNSQLNGGALLKELRRVNVAM 1429
Query: 632 TRPKRQLCVIGNMEMLSRCRVPFLNRWVLWVE 663
TR K +L +IG+ + VP + +V +E
Sbjct: 1430 TRAKSKLIIIGSKSTIG--SVPEIKSFVNLLE 1459
>SPBC16D10.04c [L] KOG1805 DNA replication helicase
Length = 1398
Score = 139 bits (351), Expect = 1e-32
Identities = 138/469 (29%), Positives = 204/469 (43%), Gaps = 93/469 (19%)
Query: 202 LNESQRDAIQHSLSNE-ISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGPSNISVDTI 260
LNE Q A++ + E S+I G PGTGKT T+ LI+ L + ++IL+ ++++VD I
Sbjct: 933 LNEDQITALKKCHAAEHYSLILGMPGTGKTTTISSLIRSLLAKKKKILLTSFTHLAVDNI 992
Query: 261 LERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKK 320
L +L ++R+G P ++ P V L G D+ AS+K
Sbjct: 993 LIKLKGC--DSTIVRLGSPHKIHPLVKEFCLT-------EGTTFDDL--------ASLKH 1035
Query: 321 LKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSK 380
+IV C+ G + +
Sbjct: 1036 FYED-------------------------------PQIVACSSLG------VYHSIFNKR 1058
Query: 381 LFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLST 440
F+ IIDE SQ P C PL ++ ++ GD QLPP +K K LS
Sbjct: 1059 KFDYCIIDEASQIPLPICLGPL-----QLAEKFVLVGDHYQLPPLVKNSRTSKDG--LSL 1111
Query: 441 TVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVES 500
++F +LL E L +QYRMNE+I SS +Y G L Q LP
Sbjct: 1112 SLF-KLLSEKHPEAVTTLRLQYRMNEDINSLSSELIYGGNLVCGSKTISQKKLILPKAHL 1170
Query: 501 ND----------------NTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENE 544
+D N + I+ +T DD + +N + N E
Sbjct: 1171 SDGLPDSSSSLHWVNKLINPSHSVIFFNT--DDILGVESKTNNILE----------NHTE 1218
Query: 545 AYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGREKEC 604
A+L V ++ GV + SIG+IS Y SQV LL K + + IEI+TVD +QGR+K+
Sbjct: 1219 AFLIEQAVSSFLERGVKQSSIGIISIYKSQVELLSKNL-KSFTEIEINTVDRYQGRDKDI 1277
Query: 605 IILSLVRSNENFEVG-FLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRV 652
I++S VRSN VG L+D RLNVA++R K + + G++ LS +
Sbjct: 1278 ILISFVRSNSKNLVGELLRDWHRLNVALSRAKVKCIMFGSLSTLSSSNI 1326
>Hs14251207_2 [A] KOG1804 RNA helicase
Length = 776
Score = 139 bits (350), Expect = 1e-32
Identities = 147/497 (29%), Positives = 222/497 (44%), Gaps = 106/497 (21%)
Query: 187 IKKDPEHNVKFYNEQLNESQRDAIQHSLSNEIS----IIHGPPGTGKTYTLVELIKQLYD 242
I+ ++F+N LNE+Q+ A++ LS + I+ GPPGTGKT T++E + Q++
Sbjct: 295 IQTPKARKMEFFNPVLNENQKLAVKRILSGDCRPLPYILFGPPGTGKTVTIIEAVLQVHF 354
Query: 243 R--GERILVCGPSNISVDTILERL--SKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKG 298
RILVC PSN + D + RL SKV+ ++R+ R
Sbjct: 355 ALPDSRILVCAPSNSAADLVCLRLHESKVLQPATMVRVNATCRF---------------- 398
Query: 299 DSGMILKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKI 358
+EI I +VK RD + W K+ II I
Sbjct: 399 ----------EEI--VIDAVKPY--CRDGEDIW--------------KASRFRII----I 426
Query: 359 VVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQ-RLIIAG 417
C SS L ++ F + +DE Q+ EP+C IPL L SD+ ++++AG
Sbjct: 427 TTC-----SSSGLFYQIGVRVGHFTHVFVDEAGQASEPECLIPL--GLMSDISGQIVLAG 479
Query: 418 DDKQLPPTIKTE-------DNDKVKRLLSTTVFDRLLQHYG-----NEFKYLLNVQ-YRM 464
D QL P IK+ + ++RL+S + R +G N V+ YR
Sbjct: 480 DPMQLGPVIKSRLAMAYGLNVSFLERLMSRPAYQRDENAFGACGAHNPLLVTKLVKNYRS 539
Query: 465 NEEIMQFSSNELYDGKLK--ADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERS 522
+E ++ S Y +L+ AD +V LL G E FP I+ G + E
Sbjct: 540 HEALLMLPSRLFYHRELEVCADPTVVTSLL----GWEKLPKKGFPLIFHGVRGSEAREGK 595
Query: 523 DENDNDADDKFHLVSSKYNENEAYLALYH---VEQLIKAGVTEESIGVISPYNSQVSLLK 579
S +N EA L + + I + V+ IGVI+PY QV ++
Sbjct: 596 SP-------------SWFNPAEAVQVLRYCCLLAHSISSQVSASDIGVITPYRKQVEKIR 642
Query: 580 KLIHEKH-QAIEISTVDGFQGREKECIILSLVRSNEN------FEVGFLKDERRLNVAMT 632
L+ I++ +V+ FQG+E II+S VRSNE+ + +GFL + +R NVA+T
Sbjct: 643 ILLRNVDLMDIKVGSVEEFQGQEYLVIIISTVRSNEDRFEDDRYFLGFLSNSKRFNVAIT 702
Query: 633 RPKRQLCVIGNMEMLSR 649
RPK L V+GN +L R
Sbjct: 703 RPKALLIVLGNPHVLVR 719
>At1g16800 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1939
Score = 137 bits (344), Expect = 7e-32
Identities = 169/628 (26%), Positives = 264/628 (41%), Gaps = 183/628 (29%)
Query: 183 ERKFIKKDPEHNVKFYNEQLNESQRDAIQHSLSN-------EISIIHGPPGTGKTYTLVE 235
+R ++ P + NESQ AI ++ + +IS+I GPPGTGKT T+V
Sbjct: 1084 KRSDLRSLPHSLQQILKSSFNESQLQAISVAIGSSNLMKAFDISLIQGPPGTGKTRTIVA 1143
Query: 236 LI----------------------------------------------KQLYDRGE---- 245
+I KQL D E
Sbjct: 1144 IISGLLASASHKTSDRGNSEPGHSSSTSRQGMNPSVAVARAWQDAALAKQLNDNSETNRK 1203
Query: 246 --------RILVCGPSNISVDTILERLSKV-VPGDE-------LLRIGHPSRLLPQVLSH 289
R+L+C SN +VD ++ R+S + + G + L+R+G+ + +
Sbjct: 1204 IAEKNGRGRVLICAQSNAAVDELVSRISSLGIYGRDGKMFKPYLVRVGNAKTVHSNSMPF 1263
Query: 290 SLDVL-----------------SKKGDSGMILKDIMKEIDDTIASVK------------- 319
LD L +K DS +L+ ++++ D I +
Sbjct: 1264 FLDTLVDQRLAEERMRINESKSNKGADSSALLRSNLEKVVDQITHFEAKRANINQESLDA 1323
Query: 320 ---------------KLKSSRD-----------RKKGWQEVKALRKELRQRE------KS 347
KL S + ++K ++++ A++ + R+ K
Sbjct: 1324 KDKPENEHHNKDDDGKLMSDAELGIRLRRLYEQKRKIYKDLSAVQAQERKANYEMRTLKQ 1383
Query: 348 GLINIILK-SKIVVCTLHG------SSSRELLSAYDLQS----KLFNTLIIDEVSQSLEP 396
L ILK ++IVV TL G S E L+A+ S LF+ ++IDE +Q+LEP
Sbjct: 1384 KLRKSILKEAQIVVTTLSGCGGDLYSVCAESLAAHKFGSPSEDNLFDAVVIDEAAQALEP 1443
Query: 397 QCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKY 456
IPL LKS + I+ GD KQLP T+ + N K L ++F+R LQ G
Sbjct: 1444 ATLIPL-QLLKSRGTKCIMVGDPKQLPATVLS--NVASKFLYECSMFER-LQRAGYPI-L 1498
Query: 457 LLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGD 516
+L QYRM+ EI +F S YD KL ++ + P E++ P ++ D D
Sbjct: 1499 MLTQQYRMHPEICRFPSMHFYDNKLLNGVDMSSK---SAPFHENHH--LGPYVFYDIV-D 1552
Query: 517 DFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTE---ESIGVISPYNS 573
RS ++ SS NE EA A+ + K +E IG+I+PY
Sbjct: 1553 GQEHRSGDS-----------SSVCNEQEAEAAVQLLRFFKKRYPSEFVAGRIGIITPYKR 1601
Query: 574 QVSLLKKLIHEKHQA-----IEISTVDGFQGREKECIILSLVRSNEN-------FEVGFL 621
Q+++L+ A +E++TVDGFQG+E + ++LS VR+ + +GF+
Sbjct: 1602 QLAVLRSRFTGAFGAQVTADMEMNTVDGFQGKEVDILVLSTVRATHSAPDGVNQSRIGFV 1661
Query: 622 KDERRLNVAMTRPKRQLCVIGNMEMLSR 649
D RR+NVA+TR K L V+GN L R
Sbjct: 1662 ADVRRMNVALTRAKLSLWVLGNTRTLQR 1689
>7295157 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1417
Score = 129 bits (324), Expect = 1e-29
Identities = 135/495 (27%), Positives = 222/495 (44%), Gaps = 83/495 (16%)
Query: 201 QLNESQRDAIQHS-------LSNEISIIHGPPGTGKTYTLVELIKQ-LYDRG-----ERI 247
+LNE Q + + H+ L +++I GPPGTGK+ + EL Q LY +I
Sbjct: 912 KLNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCLQTLYGNAAKTLDRKI 971
Query: 248 LVCGPSNISVDTILERLS---KVVPGDE--LLRIGHPSRLLPQVLSHSLDVLSKKG---- 298
L+C SN +VD I+ L +V+ D+ LLR G ++ SL+ K
Sbjct: 972 LICAHSNTAVDHIVGLLGSVLRVMNRDQFHLLRFGMHEKMSHYSRPFSLEAHFNKAKEQK 1031
Query: 299 ------DSGMILKDIMKEIDDTIASVKK---------LKSSRDRKKGWQEVK-ALRKELR 342
++ ILK ++ D I +K+ L+ + ++K Q + L L
Sbjct: 1032 LQRVSKENAEILKKQHNDLKDEIQQLKEKTNLTSTYLLQQLQQKEKKLQLISNQLSPPLT 1091
Query: 343 QREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPL 402
QRE+ + ++ + ++CT SS +L + D F+ I+DE +Q EP +P+
Sbjct: 1092 QREEFEISHMCVTRANIICTTL-SSCVKLANYVDF----FDICIVDEATQCTEPWTLLPM 1146
Query: 403 ISHLKSDMQRLIIAGDDKQLPPTIKTEDN----------DKVKRLLSTTVFDRLLQHYGN 452
+ + +++ GD +QLP + ++ D+++R L T + H +
Sbjct: 1147 ----RFGLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMH 1202
Query: 453 EFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLD 512
+ L+ QYRM+ EI ++ + Y+ +L + A+ +P N + C
Sbjct: 1203 TKLFKLSTQYRMHPEICRWPNQYFYEDQLINAECTARFASPLIPYCVIN--LKYTC---- 1256
Query: 513 TEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYN 572
+ N A +K S NE ++A E S G+ISPY
Sbjct: 1257 ------------DSNGAQNK----SISNNEEARFVAKLLTEMDKHMPSKRFSYGLISPYQ 1300
Query: 573 SQVSLLKKLIHEKHQAIEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMT 632
+Q L ++I H I TVD +QG EK+ II+S R+ GFL + +RLNVA+T
Sbjct: 1301 NQCYALSQVI-PSHMNITPQTVDSYQGLEKDVIIISNARTRG---CGFLTNYQRLNVALT 1356
Query: 633 RPKRQLCVIGNMEML 647
RP+R L + GN E L
Sbjct: 1357 RPRRCLVICGNFEDL 1371
>Hs14211540 [A] KOG1804 RNA helicase
Length = 1003
Score = 125 bits (315), Expect = 2e-28
Identities = 132/491 (26%), Positives = 224/491 (44%), Gaps = 93/491 (18%)
Query: 195 VKFYNEQL--NESQRDAIQHSLSNEIS----IIHGPPGTGKTYTLVELIKQLYDRGER-- 246
+K Y+ L N Q A++H ++ II GPPGTGKT TLVE IKQ+ +
Sbjct: 490 LKLYDRSLESNPEQLQAMRHIVTGTTRPAPYIIFGPPGTGKTVTLVEAIKQVVKHLPKAH 549
Query: 247 ILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKD 306
IL C PSN D + +RL +P + R+ PSR D M+ +D
Sbjct: 550 ILACAPSNSGADLLCQRLRVHLPSS-IYRLLAPSR-----------------DIRMVPED 591
Query: 307 IMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGS 366
I K + D KKG + V +K+L++ ++++ TL
Sbjct: 592 I------------KPCCNWDAKKG-EYVFPAKKKLQEY------------RVLITTL--I 624
Query: 367 SSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPL-----ISHLKSDMQRLIIAGDDKQ 421
++ L+SA F + IDE +EP+ + + + +L++AGD +Q
Sbjct: 625 TAGRLVSA-QFPIDHFTHIFIDEAGHCMEPESLVAIAGLMEVKETGDPGGQLVLAGDPRQ 683
Query: 422 LPPTIKTEDNDK-------VKRLLS-TTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSS 473
L P +++ K ++RLL+ +++ + Y +F L YR + I+ +
Sbjct: 684 LGPVLRSPLTQKHGLGYSLLERLLTYNSLYKKGPDGYDPQFITKLLRNYRSHPTILDIPN 743
Query: 474 NELYDGKLKA-DDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDK 532
Y+G+L+A D V ++ G+ FP I+ G DE + ++
Sbjct: 744 QLYYEGELQACADVVDRERFCRWAGLPRQG---FPIIFHGVMG------KDEREGNSPSF 794
Query: 533 FHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAI--- 589
F+ + + L L + KA ++ S+GVISPY QV ++ I + + +
Sbjct: 795 FNPEEAATVTSYLKLLLAPSSKKGKARLSPRSVGVISPYRKQVEKIRYCITKLDRELRGL 854
Query: 590 ------EISTVDGFQGREKECIILSLVRSNENF-------EVGFLKDERRLNVAMTRPKR 636
++ +V+ FQG+E+ I++S VRS+++F +GFLK+ +R NVA+TR K
Sbjct: 855 DDIKDLKVGSVEEFQGQERSVILISTVRSSQSFVQLDLDFNLGFLKNPKRFNVAVTRAKA 914
Query: 637 QLCVIGNMEML 647
L ++GN +L
Sbjct: 915 LLIIVGNPLLL 925
>7292369_2 [A] KOG1804 RNA helicase
Length = 754
Score = 125 bits (315), Expect = 2e-28
Identities = 129/490 (26%), Positives = 216/490 (43%), Gaps = 74/490 (15%)
Query: 192 EHNVKFYNEQLNESQRDAIQHSLSNEIS----IIHGPPGTGKTYTLVELIKQLYDR--GE 245
+ +++YN+ LN Q+ A+ + L E ++ GPPG+GKT TL+E + QL G
Sbjct: 254 DSKLEWYNQSLNSIQKRAVFNILRGEAENIPYVLFGPPGSGKTMTLIETLLQLVRNLPGA 313
Query: 246 RILVCGPSNISVDTILERL--SKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMI 303
RILV PSN S D + +RL SK + + +R+ V + + +I
Sbjct: 314 RILVGTPSNSSADLVTKRLIDSKALLQGDFIRL----------------VSYNQVEKDLI 357
Query: 304 LKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTL 363
+IM + V + S D+ + LR Q + G I + + CT
Sbjct: 358 PPEIMSYC--ATSDVGAVGSCEDKMMVTESGLKLRC---QAKFIGTHRITIST----CTT 408
Query: 364 HGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLP 423
G+ + + F ++ DE Q EP+ +P++ K Q ++++GD +QL
Sbjct: 409 LGNFLQ-----LGFPAGHFTHVLFDEAGQCTEPETMVPIVMLTKKRSQ-VVLSGDPRQLQ 462
Query: 424 PTIKTEDNDKV-------KRLLSTTVFDRLLQHYGNEFKY------LLNVQYRMNEEIMQ 470
+ + K+ +RLL + + + LQ + Y L YR IM
Sbjct: 463 SIVTSRIASKMGFSISFLERLLERSPYRKDLQRFPESSGYNPLVLTKLLYNYRALPSIMS 522
Query: 471 FSSNELYDGKL----KADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDEND 526
S YD +L DS +LL+ L V ++ G F EN
Sbjct: 523 IYSRLFYDDELIPVLSEKDSRESRLLSKLRCVFESEKDI-----PQAHGTFFYGIIGENR 577
Query: 527 NDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKH 586
+ D S +N E L +A VT + IG+I+PY QV +L+ +
Sbjct: 578 QNNDSP-----SWFNPQEVREVFLMTIALYRANVTADQIGIITPYQKQVKMLRSMFIGTD 632
Query: 587 QAI-EISTVDGFQGREKECIILSLVRSNEN-------FEVGFLKDERRLNVAMTRPKRQL 638
+ +I +V+ FQG+E++ I++S VRS+E F +GF++ +RLNVA++R + +
Sbjct: 633 VVMPKIGSVEEFQGQERDIILISTVRSSEEILRMDARFSLGFVRCSKRLNVAVSRARAMM 692
Query: 639 CVIGNMEMLS 648
+ GN +L+
Sbjct: 693 IIFGNPHLLA 702
>7301121 [L] KOG1807 Helicases
Length = 903
Score = 123 bits (309), Expect = 8e-28
Identities = 127/464 (27%), Positives = 225/464 (48%), Gaps = 59/464 (12%)
Query: 202 LNESQRDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYDRGER-----ILVCGPSNIS 256
LNESQ+ A + +L E SII GPPGTGKT+ V+L+ L + I+V +N S
Sbjct: 450 LNESQKTAFKEALCREFSIIQGPPGTGKTHLSVQLVNSLIQNAKALGTGPIIVLTYTNNS 509
Query: 257 VDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIM----KEID 312
+D L ++S+ E+LR G+ SR PQ+ +L K LK I E
Sbjct: 510 LDKFLVKISRYT--QEILRFGNQSR-DPQISKFNLSTTIKPELVPPRLKRIWWLVNCEYK 566
Query: 313 DTIASVKKLKSSRD-RKKGWQEVKALRKELRQ-REKSGLINIIL-----KSKIVVCTLHG 365
+ +++ L ++ D ++ +Q+ A +++L Q E+ + ++ + K ++
Sbjct: 567 EKFRNLQGLYANFDGSEESYQDTLAAQEKLNQVAERIETLRMVFQFFLAREKDLLAMTTT 626
Query: 366 SSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPT 425
++R LQSK ++ +E ++ E +++ L + +I+ GD KQL P
Sbjct: 627 CAARHNFLFRLLQSK---CVLFEEAAEIQEAH----IVACLTPHTEHVILVGDHKQLQPF 679
Query: 426 IKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADD 485
+ +++ ++F+RL+ G F LN+QYRM I + +YD +L +
Sbjct: 680 SGS------RKVPQISLFERLIV-AGLPFS-RLNLQYRMRSCISELLVPSIYD-ELLCSE 730
Query: 486 SVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEA 545
SV + + I L ++ F + + +D S N EA
Sbjct: 731 SVKE----------------YEDIRLMSKNLYFVQHNQPEHCMSD------MSIGNLYEA 768
Query: 546 YLALYHVEQLI-KAGVTEESIGVISPYNSQVSLLKKLIHEKHQA-IEISTVDGFQGREKE 603
+ E LI KA I ++SPYN Q+ +K + + +++ +++++VD FQG E
Sbjct: 769 GVLAKLTEFLIQKAQYKHSDIVILSPYNGQIECIKNALPQNYRSTVQVASVDSFQGLEAN 828
Query: 604 CIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEML 647
++LSLVRSN + +GFL+ R+ VA++R + L ++GN+ +L
Sbjct: 829 IVLLSLVRSNISGRIGFLRQANRVCVALSRARWALYIVGNVTIL 872
>7303245 [A] KOG1804 RNA helicase
Length = 1194
Score = 119 bits (297), Expect = 2e-26
Identities = 139/529 (26%), Positives = 244/529 (45%), Gaps = 86/529 (16%)
Query: 149 TTNTITYKRMQSTMR---KLAEFNSIPDNILIQYMLHERKFIKKDPEHNVKFYNEQL--- 202
TT T+ ++ +++ MR + + S + +Q +L + V N +L
Sbjct: 414 TTYTLIFRPLRAVMRYQYRALQQLSFTRHSDVQRILFPGEIPNTPLASGVLQLNNKLIST 473
Query: 203 NESQRDAI-QHSLSNEIS---IIHGPPGTGKTYTLVELIKQLY-DRGE-RILVCGPSNIS 256
N Q A+ Q +LS + I+ GPPGTGKT T+VE I QLY +R E ILV SN +
Sbjct: 474 NPEQMQAVRQIALSPRLKAPYIVFGPPGTGKTSTIVEAIYQLYINRPETHILVLAGSNTA 533
Query: 257 VDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIA 316
D + RL + + + R L ++ S + D ++ D+ IDD +
Sbjct: 534 CDEVALRLLRAIAKAPQSQ----PRPLTRIFSANCD---RRIDN----------IDDLLL 576
Query: 317 SVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYD 376
+ + + V+A+ + +IV+CTL S + +L +
Sbjct: 577 EYSNMYTVHF----YPAVQAVHQY----------------RIVICTL--SLAGKLSTGGF 614
Query: 377 LQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKR 436
+ ++ + +DE + S E + + + L + LI++GD KQL P ++++ ++
Sbjct: 615 AANNVYTHVFVDEAAASTEAEVLMGITCTLSPTLN-LILSGDHKQLGPVLQSQRANEWG- 672
Query: 437 LLSTTVFDRLLQH----------YGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDS 486
L T+F+RLLQ Y + L +R + EI+ +N Y+G L+ +
Sbjct: 673 -LGLTLFERLLQRKCYQVEEDGSYNASVQTRLIRNFRSHPEIVSLYNNMYYEGHLRTEAP 731
Query: 487 VAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAY 546
+ +++ N TFP ++ G +S S N E
Sbjct: 732 M--EIVCRFHNWFYLPNATFPIMFHSVFGTTMNTKSSV-------------SLCNNKEID 776
Query: 547 LALYHVEQLIKAGVTEES-----IGVISPYNSQVSLLKKLIHEKHQA-IEISTVDGFQGR 600
+ + +V+ L+ G+ E IG+ISPY +Q +++ ++ ++ + I+ +V+ FQG+
Sbjct: 777 VVMDYVKDLMYFGLNGEKLLQTDIGIISPYKNQYQRIQEQLNMRNWSQIDCGSVELFQGK 836
Query: 601 EKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
EK II+S VRS ++GFL +ERRLNV ++RP L +IGN LS+
Sbjct: 837 EKHVIIVSFVRSFTP-KLGFLNNERRLNVLLSRPISLLILIGNPRTLSQ 884
>Hs21703358_3 [A] KOG1804 RNA helicase
Length = 498
Score = 119 bits (297), Expect = 2e-26
Identities = 132/501 (26%), Positives = 231/501 (45%), Gaps = 87/501 (17%)
Query: 201 QLNESQRDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYD------------RGER-- 246
+LN SQ A++ +L ++I GPPGTGKT + ++ + RGE+
Sbjct: 1 KLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRL 60
Query: 247 ----ILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGM 302
IL CGPSN SVD + L + + EL P R+ + S + + G +
Sbjct: 61 GGPCILYCGPSNKSVDVLAGLLLRRM---EL----KPLRVYSEQAEASEFPVPRVGSRKL 113
Query: 303 ILKDIMK-EIDDTIASVKKLKSSRDRKKGWQ-EVKAL-----RKELRQREKSGLINIIL- 354
+ K + + ++ S+ R + E+KA R EL RE +L
Sbjct: 114 LRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLW 173
Query: 355 --------KSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHL 406
+ ++++CT ++S L D++ +++DE + EP+ IPL+
Sbjct: 174 EARKFELDRHEVILCTCSCAASASL-KILDVRQ-----ILVDEAGMATEPETLIPLVQFP 227
Query: 407 KSDMQRLIIAGDDKQLPPTIKTEDNDKVKRL-LSTTVFDRLLQHYGNEFKYLLNVQYRMN 465
+++ ++++ GD KQL P +K N++++ L L ++F+R +E ++L+ QYRM+
Sbjct: 228 QAE--KVVLLGDHKQLRPVVK---NERLQNLGLDRSLFERY-----HEDAHMLDTQYRMH 277
Query: 466 EEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESN-DNTTFPCIWLDTEGDDFPERSDE 524
E I F S Y KLK + + P V + + P I+ +G ERS
Sbjct: 278 EGICAFPSVAFYKSKLKTWQGLRRP-----PSVLGHAGKESCPVIFGHVQGH---ERSLL 329
Query: 525 NDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTE-ESIGVISPYNSQVSLLKKLIH 583
D ++ +SK N E + +QL E + I V++PYN+Q S + K +
Sbjct: 330 VSTDEGNE----NSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALR 385
Query: 584 EKHQA-IEISTVDGFQGREKECIILSLVRSNENFEV-------------GFLKDERRLNV 629
+ A + +S++ QG E +++S VR+ ++ GF+ D ++NV
Sbjct: 386 REGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNV 445
Query: 630 AMTRPKRQLCVIGNMEMLSRC 650
A+TR + LC+IG+ +L RC
Sbjct: 446 AVTRAQEGLCLIGD-HLLLRC 465
>Hs14769950_3 [A] KOG1804 RNA helicase
Length = 498
Score = 119 bits (297), Expect = 2e-26
Identities = 132/501 (26%), Positives = 231/501 (45%), Gaps = 87/501 (17%)
Query: 201 QLNESQRDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYD------------RGER-- 246
+LN SQ A++ +L ++I GPPGTGKT + ++ + RGE+
Sbjct: 1 KLNPSQNVAVREALEKPFTVIQGPPGTGKTIVGLHIVFWFHKSNQEQVQPGGPPRGEKRL 60
Query: 247 ----ILVCGPSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGM 302
IL CGPSN SVD + L + + EL P R+ + S + + G +
Sbjct: 61 GGPCILYCGPSNKSVDVLAGLLLRRM---EL----KPLRVYSEQAEASEFPVPRVGSRKL 113
Query: 303 ILKDIMK-EIDDTIASVKKLKSSRDRKKGWQ-EVKAL-----RKELRQREKSGLINIIL- 354
+ K + + ++ S+ R + E+KA R EL RE +L
Sbjct: 114 LRKSPREGRPNQSLRSITLHHRIRQAPNPYSSEIKAFDTRLQRGELFSREDLVWYKKVLW 173
Query: 355 --------KSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHL 406
+ ++++CT ++S L D++ +++DE + EP+ IPL+
Sbjct: 174 EARKFELDRHEVILCTCSCAASASL-KILDVRQ-----ILVDEAGMATEPETLIPLVQFP 227
Query: 407 KSDMQRLIIAGDDKQLPPTIKTEDNDKVKRL-LSTTVFDRLLQHYGNEFKYLLNVQYRMN 465
+++ ++++ GD KQL P +K N++++ L L ++F+R +E ++L+ QYRM+
Sbjct: 228 QAE--KVVLLGDHKQLRPVVK---NERLQNLGLDRSLFERY-----HEDAHMLDTQYRMH 277
Query: 466 EEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESN-DNTTFPCIWLDTEGDDFPERSDE 524
E I F S Y KLK + + P V + + P I+ +G ERS
Sbjct: 278 EGICAFPSVAFYKSKLKTWQGLRRP-----PSVLGHAGKESCPVIFGHVQGH---ERSLL 329
Query: 525 NDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTE-ESIGVISPYNSQVSLLKKLIH 583
D ++ +SK N E + +QL E + I V++PYN+Q S + K +
Sbjct: 330 VSTDEGNE----NSKANLEEVAEVVRITKQLTLGRTVEPQDIAVLTPYNAQASEISKALR 385
Query: 584 EKHQA-IEISTVDGFQGREKECIILSLVRSNENFEV-------------GFLKDERRLNV 629
+ A + +S++ QG E +++S VR+ ++ GF+ D ++NV
Sbjct: 386 REGIAGVAVSSITKSQGSEWRYVLVSTVRTCAKSDLDQRPTKSWLKKFLGFVVDPNQVNV 445
Query: 630 AMTRPKRQLCVIGNMEMLSRC 650
A+TR + LC+IG+ +L RC
Sbjct: 446 AVTRAQEGLCLIGD-HLLLRC 465
>At5g37030 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 638
Score = 117 bits (292), Expect = 8e-26
Identities = 128/470 (27%), Positives = 215/470 (45%), Gaps = 87/470 (18%)
Query: 199 NEQLNESQRDAIQHSLS-------NEISIIHGPPGTGKTYTLVELIKQLYDRGERILVCG 251
+ +LN SQ AI L N + +I GP KT T+ L+ L + +VC
Sbjct: 201 SSKLNSSQEAAILSCLETRDSNHKNSVKLIWGPL---KTKTVATLLLVLLKLRCKTVVCA 257
Query: 252 PSNISVDTILERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSG-MILKDI--M 308
P+N ++ + RL + S + ++ L + G+ M +KD +
Sbjct: 258 PTNTAIVEVTSRLLAL------------SNKYSEHATYGLGNIFLAGNQKRMRIKDTDYL 305
Query: 309 KEI--DDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGS 366
+ + D I+ ++KL S GW K L +II
Sbjct: 306 RNVFLDHRISKLRKLFLSTC---GW--------------KQSLESII------------- 335
Query: 367 SSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTI 426
+LL + ++ L++DE +Q E + L ++ I+ GD+ QLP +
Sbjct: 336 ---DLLENTETKTGNIEVLVVDEAAQLKECESVAAL---QLPGLRHAILIGDEFQLPAMV 389
Query: 427 KTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDS 486
+ +K K ++F+RL+ G++ K+LL+VQYRM+ I +F E Y G++K D +
Sbjct: 390 HNDQCEKAK--FGRSLFERLVL-LGHK-KHLLDVQYRMHPSISRFPYKEFYGGRIK-DAA 444
Query: 487 VAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAY 546
++ + ++ N +F I + R E D D ++V +E
Sbjct: 445 NVQESIYQKRFLQGNMFGSFSFINVG--------RGKEEFGDGDSPKNMVEVAV-VSEII 495
Query: 547 LALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQA-------IEISTVDGFQG 599
L+ V + K + S+GVI+PY QV +++ I +K+ + + + +VDGFQG
Sbjct: 496 SNLFKVSRERKMKM---SVGVITPYKGQVRAIQERIRDKYSSLSGELFTVNVRSVDGFQG 552
Query: 600 REKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
E++ II+S VRSN N +VGFL + +R NVA+TR + L VIGN L+R
Sbjct: 553 GEEDIIIISTVRSNSNGKVGFLSNRQRANVALTRARHCLWVIGNESTLAR 602
>At4g05540 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 660
Score = 117 bits (292), Expect = 8e-26
Identities = 97/301 (32%), Positives = 156/301 (51%), Gaps = 38/301 (12%)
Query: 358 IVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAG 417
I+ CT G++ A + + L++DE +Q E + L + ++ G
Sbjct: 383 IIFCTASGAAEMTAERAGSI-----DMLVVDEAAQLKECESVAAL---QLQGLHHAVLIG 434
Query: 418 DDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELY 477
D+ QLP +++E +K K + S +F+RL G++ K+LLNVQYRM+ I F + E Y
Sbjct: 435 DELQLPAMVQSEVCEKAKFVRS--LFERL-DSLGHK-KHLLNVQYRMHPSISLFPNMEFY 490
Query: 478 DGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVS 537
GK+ +D + K+ +T+ +L +G+ F S N ++F
Sbjct: 491 GGKI-SDAEIVKE-------------STYQKRFL--QGNMFGSFSFINVGLGKEEFGDGH 534
Query: 538 SKYNENEAYLALYHVEQLIKAGV---TEESIGVISPYNSQVSLLKKLIHEKHQAIE---- 590
S N E + + L+K T+ S+GVISPY +QVS +++ I +K+ ++
Sbjct: 535 SPKNMVEIAVVSEILTNLLKVSSETKTKMSVGVISPYKAQVSAIQERIGDKYTSVSDNLF 594
Query: 591 ---ISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEML 647
+ +VDGFQG E++ II+S VRSN N +GFL + +R NVA+TR + L VIGN L
Sbjct: 595 TLNVRSVDGFQGGEEDIIIISTVRSNCNGNIGFLSNRQRANVALTRARHCLWVIGNERTL 654
Query: 648 S 648
S
Sbjct: 655 S 655
>At4g30100 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1311
Score = 116 bits (290), Expect = 1e-25
Identities = 94/298 (31%), Positives = 149/298 (49%), Gaps = 31/298 (10%)
Query: 359 VVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGD 418
+V T SS R+L S + F+ ++IDE +Q+ E + ++ L R ++ GD
Sbjct: 918 IVFTTVSSSGRKLFSRL---THGFDMVVIDEAAQASE----VGVLPPLALGAARCVLVGD 970
Query: 419 DKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYD 478
+QLP T+ ++ + L S ++F+R LL VQYRM+ +I F S Y
Sbjct: 971 PQQLPATVISKAAGTL--LYSRSLFERF--QLAGCPTLLLTVQYRMHPQIRDFPSRYFYQ 1026
Query: 479 GKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSS 538
G+L +SV+ + D+ P ++ D R + D+
Sbjct: 1027 GRLTDSESVSTAP----DEIYYKDSVLKPYLFFDISHGRESHRGGSVSYENIDEARFCVG 1082
Query: 539 KYNENEAYLALYHVEQLIKA-GVTEESIGVISPYNSQVSLLK-----KLIHEKHQAIEIS 592
Y H+++ +K+ G + S+GVI+PY Q+ LK L ++ Q I I+
Sbjct: 1083 VY---------LHLQRTLKSLGGGKVSVGVITPYKLQLKCLKIEFGNALSQDELQEIYIN 1133
Query: 593 TVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRC 650
TVD FQG+E++ II+S VR++ N VGF+ D RR+NVA+TR KR L V+GN L +C
Sbjct: 1134 TVDAFQGQERDVIIMSCVRAS-NHGVGFVADIRRMNVALTRAKRALWVMGNASALMKC 1190
>At5g52090 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 676
Score = 114 bits (285), Expect = 5e-25
Identities = 99/358 (27%), Positives = 174/358 (47%), Gaps = 45/358 (12%)
Query: 299 DSGMILKDIMKEIDDTIASVKKLKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKI 358
+ G D K + D +L R E + +RK Q + I
Sbjct: 297 EEGNFRFDCFKRLSDDCLKALRLLPKRFEIPDMLENEDIRKFCLQN-----------ADI 345
Query: 359 VVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGD 418
++CT G++ + +++ L++DE +Q E + L ++ I+ GD
Sbjct: 346 ILCTASGAAEMNVERTGNVE-----LLVVDEAAQLKECESVAAL---QLPGLRHAILIGD 397
Query: 419 DKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYD 478
+ QLP + E +K K ++F+RL+ N K+LL+VQYRM+ I +F + E Y
Sbjct: 398 EFQLPAMVHNEMCEKAK--FGRSLFERLVLLGHN--KHLLDVQYRMHPSISRFPNKEFYG 453
Query: 479 GKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPE-RSDENDNDADDKFHLVS 537
G++K ++V K+ + ++ N +F I + ++F + S +N + ++S
Sbjct: 454 GRIKDAENV-KESIYQKRFLKGNMFDSFSFINVGRGKEEFGDGHSPKNMVEVAVISEIIS 512
Query: 538 SKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIE------- 590
+ Y + E+ +K S+GV+SPY Q+ +++ I +K+ ++
Sbjct: 513 NLYKVS--------CERRMKV-----SVGVVSPYKGQMRAIQEKIGDKYSSLSGQQFTLN 559
Query: 591 ISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLS 648
+ +VDGFQG E++ II+S VRSN N +VGFL + +R NVA+TR + L VIGN L+
Sbjct: 560 VRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLA 617
>At1g65810 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1050
Score = 114 bits (285), Expect = 5e-25
Identities = 102/305 (33%), Positives = 154/305 (50%), Gaps = 44/305 (14%)
Query: 358 IVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAG 417
++ CT S+ + S L L+IDE +Q E + IPL L+ +Q I+ G
Sbjct: 536 LLFCTASSSARLHMSSPIQL-------LVIDEAAQLKECESAIPL--QLRG-LQHAILIG 585
Query: 418 DDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELY 477
D+KQLP IK+ N + L ++F+RL+ N K LLN+QYRM+ I F + E Y
Sbjct: 586 DEKQLPAMIKS--NIASEADLGRSLFERLVLLGHN--KQLLNMQYRMHPSISIFPNREFY 641
Query: 478 DGKLKADDSVA------KQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADD 531
D K+ SV K L + G S N + + G+ + S +N +
Sbjct: 642 DMKILDAPSVRLRSYEKKFLPEKMYGPYSFINIAYG---REQFGEGY---SSKNLVEVSV 695
Query: 532 KFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEKHQA--- 588
+VS Y+ + K G T S+GVISPY +QV +++ I EK+
Sbjct: 696 VAEIVSKLYSVSR------------KTGRTI-SVGVISPYKAQVFAIQERIGEKYNTEGT 742
Query: 589 --IEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEM 646
+ + +VDGFQG E++ II+S VRSN N +GFL +++R NVA+TR + L ++GN
Sbjct: 743 FTVSVRSVDGFQGGEEDIIIISTVRSNGNGAIGFLSNQQRTNVALTRARYCLWILGNEAT 802
Query: 647 LSRCR 651
L+ R
Sbjct: 803 LTNNR 807
Score = 54.3 bits (129), Expect = 6e-07
Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 7/75 (9%)
Query: 201 QLNESQRDAIQHSL-------SNEISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGPS 253
+LN SQ DAI L SN I +I GPPGTGKT T L+ R L C P+
Sbjct: 266 KLNSSQEDAILRCLEAKSCNHSNNIKLIWGPPGTGKTKTTSVLLLNFLKMRCRTLTCAPT 325
Query: 254 NISVDTILERLSKVV 268
NI+V + RL K+V
Sbjct: 326 NIAVLEVCSRLVKLV 340
>At5g37150 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 839
Score = 114 bits (284), Expect = 6e-25
Identities = 91/301 (30%), Positives = 149/301 (49%), Gaps = 38/301 (12%)
Query: 358 IVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAG 417
I++CT G++ + +++ L++DE +Q E + L ++ I+ G
Sbjct: 508 IILCTASGAAEMNVERTGNVE-----LLVVDEAAQLKECESVAAL---QLPGLRHAILIG 559
Query: 418 DDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELY 477
D+ QLP + E +K K ++F+RL+ N K+LL+VQYRM+ I +F + E Y
Sbjct: 560 DEFQLPAMVHNEMCEKAK--FGRSLFERLVLLGHN--KHLLDVQYRMHPSISRFPNKEFY 615
Query: 478 DGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVS 537
G++K ++V ES F +G+ F S N ++F
Sbjct: 616 GGRIKDAENVK----------ESIYQKRF------LQGNMFGSFSFINVGRGKEEFGDGH 659
Query: 538 SKYNENEAYLALYHVEQLIKAGVTEE---SIGVISPYNSQVSLLKKLIHEKHQAIE---- 590
S N E + + L K S+GV+SPY Q+ +++ I +K+ ++
Sbjct: 660 SPKNMVEVAVVSEIISNLFKVSCERRMKVSVGVVSPYKGQMRAIQEKIGDKYSSLSGQQF 719
Query: 591 ---ISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEML 647
+ +VDGFQG E++ II+S VRSN N +VGFL + +R NVA+TR + L VIGN L
Sbjct: 720 TLNVRSVDGFQGGEEDIIIISTVRSNSNGKVGFLNNRQRANVALTRARHCLWVIGNETTL 779
Query: 648 S 648
+
Sbjct: 780 A 780
Score = 55.1 bits (131), Expect = 4e-07
Identities = 48/189 (25%), Positives = 82/189 (42%), Gaps = 20/189 (10%)
Query: 88 KVGDIVLVQPSAKAKSKKDETVNLDAVVSKVSNNQIVLAVDESKDQDAVQLYSFNRLCLL 147
K GD++ + + + L V S S+ + ++V S+ ++ YSF +
Sbjct: 110 KCGDLIALTMDKPRRINDLNPLLLAYVFS--SDGDLKISVHLSRSISPLENYSFGVFLMT 167
Query: 148 KTTNTITYKRMQ-----STMRKLAEFNSIPDNILIQYMLHERKFIKKDPEHNVKFYNEQL 202
TTNT + + ST+ K + +N+ + M+ + + +L
Sbjct: 168 LTTNTRIWNALHNEAAISTLTKSVLQANTVNNVFVLKMMGDLTLFLDI------IRSTKL 221
Query: 203 NESQRDAIQHSLS-------NEISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGPSNI 255
N SQ DAI L N + +I GPPGTGKT T+ L+ L + +VC P+N
Sbjct: 222 NSSQEDAILGCLETRNCTHKNSVKLIWGPPGTGKTKTVATLLFALLKLRCKTVVCAPTNT 281
Query: 256 SVDTILERL 264
++ + RL
Sbjct: 282 AIVQVASRL 290
>At5g37140 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 692
Score = 109 bits (273), Expect = 1e-23
Identities = 90/300 (30%), Positives = 144/300 (48%), Gaps = 41/300 (13%)
Query: 358 IVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAG 417
I+ CT G++ +++ + L++DE +Q E + L S ++ ++ G
Sbjct: 366 IIFCTASGAADMN-----PIRTGSVDLLVVDEAAQLKECESVAAL---QLSGLRHAVLIG 417
Query: 418 DDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELY 477
D+ QLP + E ++F+RL+ N K+LLNVQYRM+ I +F + E Y
Sbjct: 418 DELQLPAMVHNEAK------FGRSLFERLVLLGHN--KHLLNVQYRMHPSISRFPNKEFY 469
Query: 478 DGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVS 537
G++K +V ES F +G+ F S N +++F
Sbjct: 470 GGRIKDAANVQ----------ESIYQKRF------LQGNMFGSFSFINVGRGEEEFGDGH 513
Query: 538 SKYNENEAYLALYHVEQLIKAGVTEE---SIGVISPYNSQVSLLKKLIHEKHQAIE---- 590
S N E + + L K S+GV+SPY QV +++ K+ ++
Sbjct: 514 SPKNMVEVAVISEIISNLFKVSSERRIKMSVGVVSPYKGQVRAIQERTTNKYSSLSGLFT 573
Query: 591 --ISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLS 648
+ +VDGFQG E++ II+S VRSN N +VGFL + +R NVA+TR + L VIGN L+
Sbjct: 574 LNVRSVDGFQGGEEDIIIISTVRSNGNGKVGFLNNRQRANVALTRARHCLWVIGNETTLA 633
>Hs7661884 [A] KOG1804 RNA helicase
Length = 1942
Score = 108 bits (269), Expect = 4e-23
Identities = 90/332 (27%), Positives = 156/332 (46%), Gaps = 65/332 (19%)
Query: 353 ILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQR 412
ILK ++VV TL+ S + L DL+ F +++DE +Q++E + +PL L + R
Sbjct: 762 ILKHRVVVVTLNTS---QYLCQLDLEPGFFTHILLDEAAQAMECETIMPLA--LATQNTR 816
Query: 413 LIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEF--KYLLNVQYRMNEEIMQ 470
+++AGD QL P + +E + R L ++ DRL +HY EF + LL YR +E I+
Sbjct: 817 IVLAGDHMQLSPFVYSEFARE--RNLHVSLLDRLYEHYPAEFPCRILLCENYRSHEAIIN 874
Query: 471 FSSNELYDGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDAD 530
++S Y+GKL A G + +P + G+D E++
Sbjct: 875 YTSELFYEGKLMAS------------GKQPAHKDFYPLTFFTARGEDVQEKNS------- 915
Query: 531 DKFHLVSSKYNENEAYLALYHVEQLIK------AGVTEESIGVISPYNSQVSLLKKLIHE 584
++ YN E + + VE+L + + + SIGV++PY QV ++ + +
Sbjct: 916 ------TAFYNNAEVFEVVERVEELRRKWPVAWGKLDDGSIGVVTPYADQVFRIRAELRK 969
Query: 585 KHQA-IEISTVDGFQGREKECIILSLVR---------------------SNENFEVGFLK 622
K + + + V QG++ + LS VR S E+ + GFL
Sbjct: 970 KRLSDVNVERVLNVQGKQFRVLFLSTVRTRHTCKHKQTPIKKKEQLLEDSTEDLDYGFLS 1029
Query: 623 DERRLNVAMTRPKRQLCVIGN---MEMLSRCR 651
+ + LN A+TR + + V+G+ + + RCR
Sbjct: 1030 NYKLLNTAITRAQSLVAVVGDPIALCSIGRCR 1061
>At5g37160 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 871
Score = 108 bits (269), Expect = 4e-23
Identities = 89/268 (33%), Positives = 138/268 (51%), Gaps = 30/268 (11%)
Query: 385 LIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFD 444
L++DE +Q E C L L+I GD+ QLP + E+ DK K ++F+
Sbjct: 563 LVVDETAQLKE--CESVAALQLPGLCHALLI-GDEYQLPAMVHNEECDKAK--FGRSLFE 617
Query: 445 RLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESNDNT 504
RL+ K+LLNVQYRM+ I +F + E Y G++ D + ++ + + ++ N
Sbjct: 618 RLVLI--GHSKHLLNVQYRMHPSISRFPNKEFYGGRI-TDAANVQESIYEKRFLQGNMFG 674
Query: 505 TFPCIWLDTEGDDFPE-RSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEE 563
TF I + ++F + S +N + V SK N L+ V K +
Sbjct: 675 TFSFINVGRGKEEFGDGHSPKNMVEV-----AVISKIISN-----LFKVSSQRKQKM--- 721
Query: 564 SIGVISPYNSQVSLLKKLIHEKHQAIEIS--------TVDGFQGREKECIILSLVRSNEN 615
S+GVISPY QV +++ + +K+ ++ + +VDGFQG E + II+S VR N N
Sbjct: 722 SVGVISPYKGQVRAIQERVGDKYNSLSVDQLFTLNVQSVDGFQGGEVDVIIISTVRCNVN 781
Query: 616 FEVGFLKDERRLNVAMTRPKRQLCVIGN 643
VGFL + +R NVA+TR + L VIGN
Sbjct: 782 GNVGFLSNRQRANVALTRARHCLWVIGN 809
>At2g19120 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1090
Score = 107 bits (268), Expect = 5e-23
Identities = 89/297 (29%), Positives = 148/297 (48%), Gaps = 31/297 (10%)
Query: 359 VVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGD 418
+V T SS R+L S + F+ ++IDE +Q+ E + ++ L R ++ GD
Sbjct: 755 IVFTTVSSSGRKLFSRL---THGFDMVVIDEAAQASE----VGVLPPLALGAARCVLVGD 807
Query: 419 DKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYD 478
+QLP T+ ++ + L S ++F+R LL VQYRM+ +I F S Y
Sbjct: 808 PQQLPATVISKAAGTL--LYSRSLFERF--QLAGCPTLLLTVQYRMHPQIRDFPSRYFYQ 863
Query: 479 GKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSS 538
G+LK +S++ + D P ++ + R + D+
Sbjct: 864 GRLKDSESISSAP----DEIYYKDPVLRPYLFFNISHGRESHRGGSVSYENVDEARFCVG 919
Query: 539 KYNENEAYLALYHVEQLIKA-GVTEESIGVISPYNSQVSLLKK-----LIHEKHQAIEIS 592
Y H+++ +K+ G + S+GVI+PY Q+ LK L ++ + I I+
Sbjct: 920 VY---------MHLQKTLKSLGAGKVSVGVITPYKLQLKCLKHEFGNALGQDELKEIYIN 970
Query: 593 TVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
TVD FQG+E++ II+S VR++ + VGF+ D RR+NVA+TR +R L V+GN L +
Sbjct: 971 TVDAFQGQERDVIIMSCVRASGH-GVGFVSDIRRMNVALTRARRALWVMGNASALMK 1026
>CE18803 [L] KOG1803 DNA helicase
Length = 646
Score = 100 bits (250), Expect = 6e-21
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 37/303 (12%)
Query: 386 IIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDND----------KVK 435
IIDE + + W P + K +IAGD +L P I DN + K
Sbjct: 228 IIDEAGLVMASETW-PDVYKSKG----FVIAGDPNELFPQIYNHDNGNGFFNQFCCLEQK 282
Query: 436 RL-LSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLAD 494
RL ++ D + + N +L+ QYR NE IM +S+ Y+ K+K D L
Sbjct: 283 RLETQVSILDCINEKTENLSPIILDTQYRSNETIMAWSNACFYNPKVKTDFKCGSLTLRS 342
Query: 495 LPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAY-------L 547
+ P + +DT + E+ +E +LV + NENE Y +
Sbjct: 343 FFKGSKFNPLFHPFVIVDTSCEKEMEKRNETFE------YLVFNNNNENEGYANVAEAKI 396
Query: 548 ALYHVEQLIKAGVTEESIGVISPYNSQV----SLLKKLIHEKHQA----IEISTVDGFQG 599
A++H +QL+K V I +I+PY Q +++K +E+ ++ + VD G
Sbjct: 397 AMHHYKQLLKLKVQASDIAIITPYRGQSHVVRQMMRKFANEESRSDCFDTHVGDVDKIVG 456
Query: 600 REKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRVPFLNRWV 659
+E + +I ++VRSN ++G D RRL+V +T+ K+ IGN +L+ + +N+
Sbjct: 457 KEFDVVIFTMVRSNPKLDMGKAGDPRRLHVIITKAKKHFMFIGNGFLLAENNMNHINKLF 516
Query: 660 LWV 662
+V
Sbjct: 517 KYV 519
>At1g65780 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1065
Score = 100 bits (249), Expect = 7e-21
Identities = 87/281 (30%), Positives = 141/281 (49%), Gaps = 29/281 (10%)
Query: 385 LIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFD 444
L+IDE +Q E + IP+ ++ LI+ GD++QLP + E ++ ++F+
Sbjct: 567 LVIDEAAQLKECESSIPM---QLPGLRHLILVGDERQLPAMV--ESQIALEAGFGRSLFE 621
Query: 445 RLLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLAD--LPGVESND 502
RL G++ KY+LN+QYRM+ I F + ELY K+ +V ++ LPG
Sbjct: 622 RLAL-LGHK-KYMLNIQYRMHCSISSFPNKELYGKKILDAPTVRQRNYTKQYLPGEMYGP 679
Query: 503 NTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTE 562
+ + E + RS +N+ + ++++ L V + K T
Sbjct: 680 YSFINIAYGREEYGEGEGRSLKNNVEVVVVAAIIAN----------LLQVSEKTK---TR 726
Query: 563 ESIGVISPYNSQVSLLKKLIHEKHQ-------AIEISTVDGFQGREKECIILSLVRSNEN 615
++GVISPY +QV +++ I E ++ I TVDGFQG E++ II+S VRSN
Sbjct: 727 INVGVISPYKAQVIAIQEKIQETSIGDAGGLFSLRIRTVDGFQGGEEDIIIVSTVRSNGV 786
Query: 616 FEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRCRVPFLN 656
VGFL + RR NV +TR + L ++GN L + + N
Sbjct: 787 GRVGFLGNRRRTNVLLTRARFCLWILGNEATLMNSKSVWRN 827
Score = 58.9 bits (141), Expect = 2e-08
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 201 QLNESQRDAIQHSL-------SNEISIIHGPPGTGKTYTLVELIKQLYDRGERILVCGPS 253
+LN SQ DAI + L +N + +I GPPGTGKT T L+ L + R L CGP+
Sbjct: 237 KLNPSQEDAILNCLDVRRCYHANTVRLIWGPPGTGKTKTTSVLLFTLLNAKCRTLTCGPT 296
Query: 254 NISVDTILERLSKVVPGDELLRIGH 278
N+SV + R+ K+V G L+IG+
Sbjct: 297 NVSVLEVASRVLKLVSGS--LKIGN 319
>SPCC1739.03 [L] KOG1807 Helicases
Length = 1015
Score = 97.1 bits (240), Expect = 8e-20
Identities = 102/367 (27%), Positives = 175/367 (46%), Gaps = 63/367 (17%)
Query: 309 KEIDDTIASVKKLKSSRDRKKG-----WQE--VKALRKELRQ---------REKSGLIN- 351
KEID T+ ++ + + +G W E A KEL + RE+ G N
Sbjct: 616 KEID-TLLTIPNIWDIPEYSRGIIYCRWLESAYAAAEKELNRLYRFYLKVDRERIGFSNK 674
Query: 352 ---IILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTL-IIDEVSQSLEPQCWIPLISHLK 407
I+L+ V+ G ++ L D+ ++ + I+E + LE P+I +
Sbjct: 675 RAAILLRGANVI----GMTTTGLNKYRDILERINPKICFIEEAADVLEG----PIIPAVF 726
Query: 408 SDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYL-LNVQYRMNE 466
+++L++ GD KQL P T + LS ++F+RL++ N+ +Y L +Q RM+
Sbjct: 727 PSLEQLVLIGDHKQLRPGCSTYALRQDPFNLSISMFERLVE---NDMEYTRLTMQRRMHP 783
Query: 467 EIMQFSSNELYDGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDEND 526
+I + S+ D D + +PG+ + F F S D
Sbjct: 784 QIRRLVSSVYED----LSDYEITKYWPSIPGM--GEIRRF-----------FLTHSRIED 826
Query: 527 NDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLI---- 582
ND +SK N EA + + LI GV + I ++ Y +Q L+++L+
Sbjct: 827 NDG------FASKINLFEAQMLVQFAVYLINNGVEPQKITCLTFYAAQKDLIERLLSESL 880
Query: 583 -HEKHQAIEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVI 641
EKH I+++TVDG+QG E + ++LSLVR+N+ EVGFL R+ V+++R +R L +
Sbjct: 881 NREKH-FIKVATVDGYQGEENDVVLLSLVRNNDRTEVGFLSSPHRVCVSLSRARRGLFIF 939
Query: 642 GNMEMLS 648
GN ++++
Sbjct: 940 GNAQLVA 946
>Hs14786304_1 [L] KOG1807 Helicases
Length = 1839
Score = 95.9 bits (237), Expect = 2e-19
Identities = 91/311 (29%), Positives = 152/311 (48%), Gaps = 37/311 (11%)
Query: 340 ELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCW 399
ELR +E ++I+ +++V T G++ + LQ +I++E ++ LE
Sbjct: 965 ELRLQED---LHILKDAQVVGMTTTGAAKYRQI----LQKVEPRIVIVEEAAEVLEAHT- 1016
Query: 400 IPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLN 459
I+ L Q LI+ GD +QL P+ D K L ++F+RL++ N LN
Sbjct: 1017 ---IATLSKACQHLILIGDHQQLRPSANVYDLAKNFNL-EVSLFERLVKV--NIPFVRLN 1070
Query: 460 VQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFP 519
Q+RM EI + + +Y L+ SV K + GV SN L +FP
Sbjct: 1071 YQHRMCPEIARLLTPHIYQD-LENHPSVLKY--EKIKGVSSN---------LFFVEHNFP 1118
Query: 520 ERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLK 579
E+ + S N++EA+ + + + I +++ Y Q+ L+
Sbjct: 1119 EQEIQEGK----------SHQNQHEAHFVVELCKYFLCQEYLPSQITILTTYTGQLFCLR 1168
Query: 580 KLIHEKHQA-IEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQL 638
KL+ K A + + VD +QG E + I+LSLVRSN+ +VGFL+ R+ VA++R K+ +
Sbjct: 1169 KLMPAKTFAGVRVHVVDKYQGEENDIILLSLVRSNQEGKVGFLQISNRICVALSRAKKGM 1228
Query: 639 CVIGNMEMLSR 649
IGNM+ML++
Sbjct: 1229 YCIGNMQMLAK 1239
>Hs14750549 [L] KOG1806 DEAD box containing helicases
Length = 1485
Score = 90.1 bits (222), Expect = 1e-17
Identities = 121/550 (22%), Positives = 232/550 (42%), Gaps = 117/550 (21%)
Query: 191 PEHNVKFYNEQLNESQRDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYDR--GERIL 248
P + K Q +Q +AI+ + ++++ GPPGTGKT V++I +Y +R L
Sbjct: 791 PYNQPKRNTIQFTHTQIEAIRAGMQPGLTMVVGPPGTGKTDVAVQIISNIYHNFPEQRTL 850
Query: 249 VCGPSNISVDTILERLSKV-VPGDELLRIGHPSRLLPQ------------VLSHSLDVLS 295
+ SN +++ + E++ + + LLR+GH L VL+ +++L
Sbjct: 851 IVTHSNQALNQLFEKIMALDIDERHLLRLGHGEEELETEKDFSRYGRVNYVLARRIELLE 910
Query: 296 K----------KGDSG--------MILKDIMKEIDDTIASVKKLKSSRD----------- 326
+ GD+ L +M ++ I+ VK S+
Sbjct: 911 EVKRLQKSLGVPGDASYTCETAGYFFLYQVMSRWEEYISKVKNKGSTLPDVTEVSTFFPF 970
Query: 327 ------------RKKGWQE-----------VKALRKELRQREKSGLIN---------IIL 354
+ + ++E +K + +L + S L+ ++
Sbjct: 971 HEYFANAPQPIFKGRSYEEDMEIAEGCFRHIKKIFTQLEEFRASELLRSGLDRSKYLLVK 1030
Query: 355 KSKIVVCTL-HGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSD---- 409
++KI+ T H + R L + ++ ++++E +Q LE + +IPL+ D
Sbjct: 1031 EAKIIAMTCTHAALKRHDLVKLGFK---YDNILMEEAAQILEIETFIPLLLQNPQDGFSR 1087
Query: 410 MQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIM 469
++R I+ GD QLPP IK K + ++F R ++ L+ Q R +
Sbjct: 1088 LKRWIMIGDHHQLPPVIKNMAFQKYSNM-EQSLFTRFVRVGVPTVD--LDAQGRARASLC 1144
Query: 470 QFSSNELYDGKLKADDSVAKQLLADLPGVE--SNDNTTFPCIWLDTEGDDFPERSDENDN 527
LY+ + K L +LP V+ +T + D + + + ++
Sbjct: 1145 N-----LYNWRYKN--------LGNLPHVQLLPEFSTANAGLLYDFQLINVEDFQGVGES 1191
Query: 528 DADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLLKKLIHEK-- 585
+ + F+ E E +AL+ L+ G + I +++ YN Q L++ +I+ +
Sbjct: 1192 EPNPYFY---QNLGEAEYVVALFMYMCLL--GYPADKISILTTYNGQKHLIRDIINRRCG 1246
Query: 586 -----HQAIEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCV 640
+ +++TVD FQG++ + I+LSLVR+ VG L+D RRL VAM+R + L +
Sbjct: 1247 NNPLIGRPNKVTTVDRFQGQQNDYILLSLVRTR---AVGHLRDVRRLVVAMSRARLGLYI 1303
Query: 641 IGNMEMLSRC 650
+ + C
Sbjct: 1304 FARVSLFQNC 1313
>7292718 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 685
Score = 89.4 bits (220), Expect = 2e-17
Identities = 78/286 (27%), Positives = 137/286 (47%), Gaps = 43/286 (15%)
Query: 154 TYKRMQSTMRKLA-EFNSIPDNILIQYMLHERKFIKKDPEHNVKFYNEQ----------- 201
++ RM + K A + NS+ + I + + H R D V F Q
Sbjct: 396 SFDRMTRALCKFAIDRNSVSNFIYSRLLGHGRA----DSNDEVLFRGPQPKLFSAPHLPD 451
Query: 202 LNESQRDAIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYD-RGERILVCGPSNISVDTI 260
LN SQ A++H+L +S+I GPPGTGKT T ++ QL G +LVC PSN +VD +
Sbjct: 452 LNRSQVYAVKHALQRPLSLIQGPPGTGKTVTSATIVYQLVKLHGGTVLVCAPSNTAVDQL 511
Query: 261 LERLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKK 320
E++ + +++R+ SR + + + L+ L + ++ + +T + +KK
Sbjct: 512 TEKIHRT--NLKVVRVCAKSR---EAIDSPVSFLA--------LHNQIRNM-ETNSELKK 557
Query: 321 LKSSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSAYDLQSK 380
L+ +D + + A K R +++ ++ + ++ CT G+ L
Sbjct: 558 LQQLKD--ETGELSSADEKRYRNLKRAAENQLLEAADVICCTCVGAGDGR------LSRV 609
Query: 381 LFNTLIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTI 426
F +++IDE QS EP+C +P++ K +LI+ GD QL P +
Sbjct: 610 KFTSILIDESMQSTEPECMVPVVLGAK----QLILVGDHCQLGPVV 651
>Hs20162560 [A] KOG1802 RNA helicase nonsense mRNA reducing factor (pNORF1)
Length = 239
Score = 88.6 bits (218), Expect = 3e-17
Identities = 69/201 (34%), Positives = 102/201 (50%), Gaps = 35/201 (17%)
Query: 457 LLNVQYRMNEEIMQFSSNELYDGKLK--ADDSVAKQLLADLPGVESNDNTTFPCIWLDTE 514
LL QYR + I +++ Y G L + LL LP + C + + +
Sbjct: 7 LLRTQYRCHPAISAIANDLFYKGALMNGVTEIERSPLLEWLPTL---------CFY-NVK 56
Query: 515 GDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQ 574
G + ER D+ FH V+ EA L ++ LI +G+ IGVI+ Y SQ
Sbjct: 57 GLEQIER--------DNSFHNVA------EATFTLKLIQSLIASGIAGSMIGVITLYKSQ 102
Query: 575 VSLLKKLI------HEKHQAIEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLN 628
+ L L+ H + +++STVD FQG EKE IILS VR+ + VGF+ E+R+N
Sbjct: 103 MYKLCHLLSAVDFHHPDIKTVQVSTVDAFQGAEKEIIILSCVRTRQ---VGFIDSEKRMN 159
Query: 629 VAMTRPKRQLCVIGNMEMLSR 649
VA+TR KR L ++GN+ L +
Sbjct: 160 VALTRGKRHLLIVGNLACLRK 180
>CE24674 [L] KOG1806 DEAD box containing helicases
Length = 1212
Score = 83.2 bits (204), Expect = 1e-15
Identities = 79/320 (24%), Positives = 149/320 (45%), Gaps = 51/320 (15%)
Query: 350 INIILKSKIVVCTL-HGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKS 408
++++ ++KI+ T H + R L + ++ ++++E +Q LE + +IPL+
Sbjct: 708 LSLVKEAKIIAMTCTHAALRRNELVKLGFR---YDNIVMEEAAQILEVETFIPLLLQNPQ 764
Query: 409 D----MQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRM 464
D ++R I+ GD QLPP ++ + K + ++F RL++ + L+ Q R
Sbjct: 765 DGHNRLKRWIMIGDHHQLPPVVQNQAFQKYSNM-EQSLFARLVRLSVPNVQ--LDRQGRA 821
Query: 465 NEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVE-------SNDNTTFPCIWLDTEGDD 517
+I ELY + L +LP V+ +N FP ++D
Sbjct: 822 RAQIA-----ELYQWRYNG--------LGNLPHVDGLPQFQNANAGFAFPFQFID----- 863
Query: 518 FPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSL 577
P+ + + F+ E E ALY +++ G E I +++ YN Q L
Sbjct: 864 IPDFNGHGETQPSPHFY---QNLGEAEYACALYTYMRIL--GYPAEKISILTTYNGQAQL 918
Query: 578 LKKLIHEKHQA-------IEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVA 630
++ + + ++STVD +QG++ + IILSLV++ +G ++D RRL VA
Sbjct: 919 IRDVFQRRCDTNPLIGMPAKVSTVDKYQGQQNDFIILSLVKTR---NIGHIRDVRRLVVA 975
Query: 631 MTRPKRQLCVIGNMEMLSRC 650
++R + L V+G ++ C
Sbjct: 976 LSRARLGLYVLGRSKVFMDC 995
>CE06677 [L] KOG1807 Helicases
Length = 2219
Score = 80.1 bits (196), Expect = 1e-14
Identities = 77/273 (28%), Positives = 133/273 (48%), Gaps = 47/273 (17%)
Query: 385 LIIDEVSQSLEPQCWIPLISHLKSDMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFD 444
LI++E ++ LE +IS + S ++ +++ GD KQL P + V L ++F+
Sbjct: 1233 LIVEEAAEVLEAH----IISAMISTVEHVVMIGDHKQLRPNPAVHELG-VAYGLRISMFE 1287
Query: 445 RLLQHYGNEFKYLLNVQYRMN----EEIMQFSSNELYDGKLKADDSVAKQLLADLPGVES 500
RL++ G F L Q+RMN ++I++ S YD A++ L D+ G+ +
Sbjct: 1288 RLVER-GLPFSQLRQ-QHRMNLTISDKIVKLS---FYDNVTDAENV---GLYPDVQGMAT 1339
Query: 501 NDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGV 560
N W T ++ P+ S N++E + + V+ L+K
Sbjct: 1340 N-----LFFWSHTSMEESPDEV---------------SWLNKHEISMTVALVKHLLKQNY 1379
Query: 561 TEESIGVISPYNSQVSLLKKLIHE------KHQAIEISTVDGFQGREKECIILSLVRSN- 613
T I V++ Y++Q +L+ + I + TVD FQG+E++ +I+SLVRS+
Sbjct: 1380 TTNDIVVLATYSAQKNLMYREYANVFGSTPDSNVIPVETVDSFQGKERKIVIVSLVRSHR 1439
Query: 614 ---ENFEVGFLKDERRLNVAMTRPKRQLCVIGN 643
EN +GFL R+ VA+TR + + +IGN
Sbjct: 1440 GGRENTGIGFLAVANRICVALTRAQHGMYIIGN 1472
Score = 58.2 bits (139), Expect = 4e-08
Identities = 78/327 (23%), Positives = 139/327 (41%), Gaps = 52/327 (15%)
Query: 95 VQPSAKAKSKKDETVNLDAVVSKVSNNQIVLAVDESKDQDAVQLYSFNRLC-LLKTTNTI 153
+ K +E +L A I VD+ D+D Y F++ L K +
Sbjct: 710 ISEEKKLMKTYNELRSLAACARYTKGKPIPRGVDDD-DED----YEFSKSRELSKEDIDL 764
Query: 154 TYKRMQSTMRKLAEFNSIPDNILIQYMLHERKFIKKDPEHNV-----KFYNEQLNESQRD 208
Y+++Q + + I D+ LIQ +K+ +NV +F+ + ++ESQR
Sbjct: 765 EYRQLQEPIFRPLVGVDIKDSNLIQI---NKKW------YNVSRLLDEFHPDYMDESQRL 815
Query: 209 AIQHSLSNEISIIHGPPGTGKTYTLVELIKQLYDR------GERILVCGPSNISVDTILE 262
A ++ E+S+I GPPGTGKT+ V+++K + E ILV +N +D +LE
Sbjct: 816 AFCNTFKYELSLIQGPPGTGKTHIGVQIVKTILQNRSYWKITEPILVVCFTNSGLDNLLE 875
Query: 263 RLSKVVPGDELLRIGHPSRLLPQVLSHSLDVLSKKGDSGMILKDIMKEIDDTIASVKKLK 322
R+ +++ DE L + P+++ K DS + + + D + K K
Sbjct: 876 RIYQMIENDEELSKDNGR---PKIIR-----FGSKCDSNYLKRQNVMRQD--VYEQYKSK 925
Query: 323 SSRDRKKGWQEVKALRKELRQREKSGLINIILKSKIVVCTLHGSSSRELLSA-----YDL 377
S +K + A R+ N+ + S + C+ + S E+LS + +
Sbjct: 926 VSDGAQKKMSKAGAARRHKAD-------NLAISSYTLFCSRNKLLSYEMLSRVMDPNHQM 978
Query: 378 QSKLFNTLIIDEVSQSLEPQ----CWI 400
+ + F +D L P CW+
Sbjct: 979 EIQQFTYDHVDTKGIPLSPDEAIGCWL 1005
>At2g38770 [L] KOG1806 DEAD box containing helicases
Length = 1444
Score = 70.5 bits (171), Expect = 8e-12
Identities = 71/283 (25%), Positives = 130/283 (45%), Gaps = 39/283 (13%)
Query: 382 FNTLIIDEVSQSLEPQCWIPLISHLKSD----MQRLIIAGDDKQLPPTIKTEDNDKVKRL 437
++ L+++E +Q LE + +IP++ + D ++R I+ GD QLPP +K K +
Sbjct: 1117 YDNLLMEESAQILEIETFIPMLLQRQEDGHARLKRCILIGDHHQLPPVVKNMAFQKYSHM 1176
Query: 438 LSTTVFDRLLQHYGNEFKYL-LNVQYRMNEEIMQFSSNELYDGKLK--ADDSVAKQLLAD 494
++F R ++ Y+ LN Q R + + LY+ + + D S+ K+
Sbjct: 1177 -DQSLFTRFVRL---GIPYIELNAQGRARPSLAK-----LYNWRYRDLGDLSIVKEA--- 1224
Query: 495 LPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQ 554
+ N F + D+ R + + E E +++Y +
Sbjct: 1225 --PIFQRANAGFSYEYQLVNVPDYEGRGESTPSP------WFYQNQGEAEYIVSVYIYMR 1276
Query: 555 LIKAGVTEESIGVISPYNSQVSLLKKLIHEK-------HQAIEISTVDGFQGREKECIIL 607
L+ G I +++ YN Q L++ +I+ + +++TVD FQG++ + I+L
Sbjct: 1277 LL--GYPANKISILTTYNGQKLLIRDVINRRCVPYPFIGPPSKVTTVDKFQGQQNDFILL 1334
Query: 608 SLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEMLSRC 650
SLVR+ VG L+D RRL VAM+R + L V + +C
Sbjct: 1335 SLVRTR---FVGHLRDVRRLVVAMSRARLGLYVFCRRSLFEQC 1374
>7299528 [L] KOG1806 DEAD box containing helicases
Length = 1170
Score = 70.5 bits (171), Expect = 8e-12
Identities = 78/319 (24%), Positives = 142/319 (44%), Gaps = 53/319 (16%)
Query: 352 IILKSKIVVCTL-HGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSD- 409
++ ++KI+ T H + R+ L + ++ ++++E +Q LE + +IPL+ D
Sbjct: 728 LVKEAKIIAMTCTHAALKRKELVNLGFR---YDNILMEESAQILEIETFIPLLLQNPLDG 784
Query: 410 ---MQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNE 466
++R I+ GD QLPP IK + Q Y N + L R+
Sbjct: 785 LNRLKRWIMIGDHHQLPPVIK----------------NMAFQKYSNMEQSLFTRLVRLGV 828
Query: 467 EIMQFSSNELYDGKLKADDSVAK------QLLADLPGVESNDN--TTFPCIWLDTEGDDF 518
+ DG+ +A S+ + L DL + D P D + +
Sbjct: 829 PTVDL------DGQGRARASICSLYKWRYKKLEDLQHIFERDEYKQANPGFVHDYQLINV 882
Query: 519 PERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSLL 578
+ +++ + F+ E E +A+Y +L+ G I +++ YN Q L+
Sbjct: 883 EDFKGVGESEPNPYFY---QNLAEAEYIVAVYMYMRLL--GYPAAKISILTTYNGQKHLI 937
Query: 579 KKLIHEK-------HQAIEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAM 631
+ +I+ + +I+TVD +QG++ + I++SLVR+ VG L+D RRL VAM
Sbjct: 938 RDVINARCGNNPLIGWPHKITTVDKYQGQQNDYILISLVRTKA---VGHLRDVRRLVVAM 994
Query: 632 TRPKRQLCVIGNMEMLSRC 650
+R + L V G + + C
Sbjct: 995 SRARLGLYVFGRVSLFKNC 1013
>CE27795 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1553
Score = 70.1 bits (170), Expect = 1e-11
Identities = 80/269 (29%), Positives = 123/269 (44%), Gaps = 33/269 (12%)
Query: 387 IDEVSQSLEPQCWIPLISHLKS-DMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDR 445
IDE SQ E L+ LKS + + GD QLPP + K+K +R
Sbjct: 1208 IDEASQLAE----CTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTMER 1263
Query: 446 LLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESN--DN 503
++ L NV YR + + + S YDG L + V++ +D + N
Sbjct: 1264 AIKEKMFPVCTLRNV-YRCHPKTTELLSELFYDGALVS--GVSELARSDFMTKRDDFWPN 1320
Query: 504 TTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLI---KAGV 560
FP ++++ G A K + +S N +E + V+ LI + V
Sbjct: 1321 PKFPMMFVNNTG-------------ASTK--MGTSTSNSSEKSIVGEIVQNLINDPRNPV 1365
Query: 561 TEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGREKECIILSLVRSNENFEVGF 620
IGVIS Y++Q S+L + H + ++ TVD FQG EKE II+ +NE F
Sbjct: 1366 NPSDIGVISFYSAQTSILTE--HLRGSGVKCGTVDAFQGSEKEIIIMC--STNERIS-DF 1420
Query: 621 LKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
++ RLNVAM+R K+ +IG+++ L R
Sbjct: 1421 MQLSNRLNVAMSRAKQVTIIIGHLDGLRR 1449
>CE05420 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1106
Score = 70.1 bits (170), Expect = 1e-11
Identities = 63/254 (24%), Positives = 113/254 (43%), Gaps = 51/254 (20%)
Query: 415 IAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKY---LLNVQYRMNEEIMQF 471
+ GD QLP +D ++ LL + + + + +L + YR + +
Sbjct: 777 LVGDINQLPAYC----DDDLQGLLKDYGIGKTMARASRDKMFPQSILRLVYRCHPTTTKI 832
Query: 472 SSNELYDGKLKADDSVAKQLLADLPGVESND-------------NTTFPCIWLDTEGDDF 518
S+ Y+G+L + GVE N N++FP + L+ E D +
Sbjct: 833 LSDLFYNGQL-------------ISGVEKNQRDEFMRMRPDIWPNSSFPILVLNHEKDGY 879
Query: 519 PE-RSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLIKAGVTEESIGVISPYNSQVSL 577
S N+++ D +VS + + Y G++E IG+IS Y +Q SL
Sbjct: 880 RMGTSVANNSEKDQVVRIVSLLTKKVKGY------------GLSESDIGIISFYKAQTSL 927
Query: 578 LKKLIHEKHQAIEISTVDGFQGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQ 637
L + K ++ T+D FQG E+E +I+ N + F+++ R+NVAM+R ++
Sbjct: 928 LADAL--KKTDVKCGTIDAFQGTEREVMIVCCTNKNPSL---FMQEGTRVNVAMSRARQA 982
Query: 638 LCVIGNMEMLSRCR 651
+IGN+ L + +
Sbjct: 983 TIIIGNIAKLKKAK 996
>CE01466 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 1551
Score = 70.1 bits (170), Expect = 1e-11
Identities = 80/269 (29%), Positives = 123/269 (44%), Gaps = 33/269 (12%)
Query: 387 IDEVSQSLEPQCWIPLISHLKS-DMQRLIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDR 445
IDE SQ E L+ LKS + + GD QLPP + K+K +R
Sbjct: 1208 IDEASQLAE----CTLLGLLKSFNNASFGLIGDIHQLPPYCEEGLEGKLKDFGIGNTMER 1263
Query: 446 LLQHYGNEFKYLLNVQYRMNEEIMQFSSNELYDGKLKADDSVAKQLLADLPGVESN--DN 503
++ L NV YR + + + S YDG L + V++ +D + N
Sbjct: 1264 AIKEKMFPVCTLRNV-YRCHPKTTELLSELFYDGALVS--GVSELARSDFMTKRDDFWPN 1320
Query: 504 TTFPCIWLDTEGDDFPERSDENDNDADDKFHLVSSKYNENEAYLALYHVEQLI---KAGV 560
FP ++++ G A K + +S N +E + V+ LI + V
Sbjct: 1321 PKFPMMFVNNTG-------------ASTK--MGTSTSNSSEKSIVGEIVQNLINDPRNPV 1365
Query: 561 TEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGFQGREKECIILSLVRSNENFEVGF 620
IGVIS Y++Q S+L + H + ++ TVD FQG EKE II+ +NE F
Sbjct: 1366 NPSDIGVISFYSAQTSILTE--HLRGSGVKCGTVDAFQGSEKEIIIMC--STNERIS-DF 1420
Query: 621 LKDERRLNVAMTRPKRQLCVIGNMEMLSR 649
++ RLNVAM+R K+ +IG+++ L R
Sbjct: 1421 MQLSNRLNVAMSRAKQVTIIIGHLDGLRR 1449
>7294354 [A] KOG1804 RNA helicase
Length = 2061
Score = 66.6 bits (161), Expect = 1e-10
Identities = 75/329 (22%), Positives = 132/329 (39%), Gaps = 102/329 (31%)
Query: 353 ILKSKIVVCTLHGSSSRELLSAYDLQSKLFNTLIIDEVSQSLEPQCWIPLISHLKSDMQR 412
I++ +IVV TL S S EL + L LF + +DE +Q++E + +PL L +D R
Sbjct: 925 IMRHRIVVVTL--SISMEL-ATLGLPKGLFTHIFLDEAAQAMECEAIMPLA--LANDSTR 979
Query: 413 LIIAGDDKQLPPTIKTEDNDKVKRLLSTTVFDRLLQHYGNEFKYLLNVQYRMNEEIMQFS 472
+I LL YR +E I++F+
Sbjct: 980 II------------------------------------------LLCENYRAHEAIIRFT 997
Query: 473 SNELYDGKLKADDSVAKQLLADLPGVESNDNTTFPCIWLDTEGDDFPERSDENDNDADDK 532
S Y+ KL A G + + +P + T G+D +++
Sbjct: 998 SELFYEQKLVAS------------GKQPRHDRFYPLTFFTTRGEDVQDKNS--------- 1036
Query: 533 FHLVSSKYNENEAYLALYHVEQLIK------AGVTEESIGVISPYNSQVSLLKKLIHEKH 586
++ YN E Y + V +L K + + SIG+++PY+ QV ++ + ++
Sbjct: 1037 ----TAFYNNAEVYEVVERVSELRKRWPSAWGKLNDTSIGIMTPYSDQVFRIRSELRKRR 1092
Query: 587 QA-IEISTVDGFQGREKECIILSLVRSNE--------------------NFEVGFLKDER 625
I + V QG++ + LS VR+ + + GFL + +
Sbjct: 1093 MGGISVERVLNVQGKQFRAVFLSTVRTRRTCMPQGSAPGSASTTSIGDADADYGFLSNSK 1152
Query: 626 RLNVAMTRPKRQLCVIGN---MEMLSRCR 651
LN A+TR + + V+G+ + + RCR
Sbjct: 1153 LLNTAITRAQSLVAVVGDPVALCSIGRCR 1181
>CE07357 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 602
Score = 54.7 bits (130), Expect = 5e-07
Identities = 36/110 (32%), Positives = 59/110 (52%), Gaps = 6/110 (5%)
Query: 541 NENEAYLALYHVEQL---IKAGVTEESIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGF 597
NENEA AL V L + T S+ V++ Y +Q S + + + + ++T+DG
Sbjct: 452 NENEARYALQLVTALKRHAREQNTTVSVAVLNFYGAQYSYVYSIAED---GVRVNTIDGC 508
Query: 598 QGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEML 647
QG+E + I+ L RS+ + FL + R+NVA++R K VIG ++
Sbjct: 509 QGQEYDVSIVLLTRSDPYEKSKFLVNPNRINVALSRSKMATVVIGQRHLI 558
>CE01610 [A] KOG1801 tRNA-splicing endonuclease positive effector (SEN1)
Length = 542
Score = 54.3 bits (129), Expect = 6e-07
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 541 NENEAYLALYHVEQLIKAGVTEE---SIGVISPYNSQVSLLKKLIHEKHQAIEISTVDGF 597
NE EA AL VE L + T + +++ Y +Q S + + ++ + ++T+DG
Sbjct: 353 NEGEARYALQLVEALTRYASTANKKITAAILNFYGAQYSYVYSMAEDE---VTVNTIDGC 409
Query: 598 QGREKECIILSLVRSNENFEVGFLKDERRLNVAMTRPKRQLCVIGNMEM 646
QG+E + I+ L RS+ FL + R+NVA++RPK +IG +
Sbjct: 410 QGQEYDVTIVLLTRSDPYERSKFLVNANRINVALSRPKIATVIIGQRHL 458
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.134 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,841,811
Number of Sequences: 60738
Number of extensions: 1792196
Number of successful extensions: 7206
Number of sequences better than 1.0e-05: 64
Number of HSP's better than 0.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 6869
Number of HSP's gapped (non-prelim): 138
length of query: 681
length of database: 30,389,216
effective HSP length: 113
effective length of query: 568
effective length of database: 23,525,822
effective search space: 13362666896
effective search space used: 13362666896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)