ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV4799 good R KOG1940 General function prediction only Zn-finger protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV4799 1647065 1645116 -650
(650 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
SPAC2F3.16 [R] KOG1940 Zn-finger protein 276 9e-74
Hs20533075 [R] KOG1940 Zn-finger protein 228 2e-59
At5g18650 [R] KOG1940 Zn-finger protein 216 1e-55
At3g18290 [R] KOG1940 Zn-finger protein 210 5e-54
At1g74760 [R] KOG1940 Zn-finger protein 209 8e-54
At3g62970 [R] KOG1940 Zn-finger protein 207 4e-53
At5g22920 [R] KOG1940 Zn-finger protein 195 2e-49
7297117 [R] KOG1940 Zn-finger protein 194 5e-49
At1g18910 [R] KOG1940 Zn-finger protein 172 1e-42
At5g25560 [R] KOG1940 Zn-finger protein 138 3e-32
ECU11g0340 [R] KOG1940 Zn-finger protein 137 5e-32
>SPAC2F3.16 [R] KOG1940 Zn-finger protein
Length = 425
Score = 276 bits (705), Expect = 9e-74
Identities = 133/328 (40%), Positives = 186/328 (56%), Gaps = 19/328 (5%)
Query: 156 EDALRSRIKKIRALVDLSETQKASMIQTLMMKHATVPSEHTGCSHSHESDELVSKGNHVS 215
+D++R +I +I+++ LSE +KA ++Q ++M +H ESDE N +S
Sbjct: 74 QDSVREKIHEIQSMSQLSEKRKALLMQKMLMSGYLKYRR----THKKESDE-----NQLS 124
Query: 216 EYNFDPPEPTEEDKKDIDQIPGVRGCPHYQRNCKLLCSQCNKWVSCRFCHDEEIDDHHFQ 275
+ E T DK+ + GC HY RNCK+ C C++W +CR CH++ D H +
Sbjct: 125 SSDL---EKTYYDKEQ-----EILGCSHYMRNCKVQCFDCHEWYTCRHCHNDACD-HVLE 175
Query: 276 REATQWILCTSCFHYQAPSTHCDHCGIEFALYYCPICILYDNDETKDIYHCDKCGICRLG 335
R A + +LC C Q + +C +C YYC C L+D+D K YHCD CGICR+G
Sbjct: 176 RPAVENMLCMICSKVQPAAQYCKYCKNCMGRYYCNKCKLWDDDPNKSSYHCDDCGICRIG 235
Query: 336 LGLGQDFFHCDQCDACLSIELLGNHKCIENSTRSNCPICREYMFTSTMAVVYMDPCGHAI 395
GLG D+FHC C CL I + H+CIE ST NCPIC EYMF S V+++ C H +
Sbjct: 236 RGLGDDYFHCKTCGLCLPISVFNTHRCIERSTDCNCPICGEYMFNSRERVIFLS-CSHPL 294
Query: 396 HQHCFDEYIKHSYKCPNCNVSVINMEREFRILHQEIQDYRLPEPYCFWKCKVQCNDCRKK 455
HQ C +EYI+ +Y+CP C ++IN+ FRIL EI+ +P PY W ++CNDC +
Sbjct: 295 HQRCHEEYIRTNYRCPTCYKTIINVNSLFRILDMEIERQPMPYPYNTWISTIRCNDCNSR 354
Query: 456 SMVDYHILGLCCQQCGSYNTRQLELIKP 483
YH LG C C SYNT + KP
Sbjct: 355 CDTKYHFLGHKCNSCHSYNTCISSIYKP 382
>Hs20533075 [R] KOG1940 Zn-finger protein
Length = 261
Score = 228 bits (582), Expect = 2e-59
Identities = 105/241 (43%), Positives = 143/241 (58%), Gaps = 6/241 (2%)
Query: 237 GVRGCPHYQRNCKLLCSQCNKWVSCRFCHDEEIDDHHFQREATQWILCTSCFHYQAPSTH 296
G RGC HY R C L C+K +CR CHD +DH R + + C +C Q
Sbjct: 16 GQRGCEHYDRGCLLKAPCCDKLYTCRLCHDNN-EDHQLDRFKVKEVQCINCEKIQHAQQT 74
Query: 297 CDHCGIEFALYYCPICILYDNDETKDIYHCDKCGICRLGLGLGQDFFHCDQCDACLSIEL 356
C+ C F YYC IC L+D D+ + YHC+ CGICR+G +DFFHC +C+ CL++ L
Sbjct: 75 CEECSTLFGEYYCDICHLFDKDKKQ--YHCENCGICRIGPK--EDFFHCLKCNLCLAMNL 130
Query: 357 LGNHKCIENSTRSNCPICREYMFTSTMAVVYMDPCGHAIHQHCFDEYIKHSYKCPNCNVS 416
G HKCIEN +R NCPIC E + TS + V ++ PCGH +H+ C++E +K Y+CP C S
Sbjct: 131 QGRHKCIENVSRQNCPICLEDIHTSRV-VAHVLPCGHLLHRTCYEEMLKEGYRCPLCMHS 189
Query: 417 VINMEREFRILHQEIQDYRLPEPYCFWKCKVQCNDCRKKSMVDYHILGLCCQQCGSYNTR 476
++M R +R L E+ +P Y + CNDC +S V +HILG+ C+ C SYNT
Sbjct: 190 ALDMTRYWRQLDDEVAQTPMPSEYQNMTVDILCNDCNGRSTVQFHILGMKCKICESYNTA 249
Query: 477 Q 477
Q
Sbjct: 250 Q 250
>At5g18650 [R] KOG1940 Zn-finger protein
Length = 267
Score = 216 bits (549), Expect = 1e-55
Identities = 99/247 (40%), Positives = 143/247 (57%), Gaps = 11/247 (4%)
Query: 240 GCPHYQRNCKLLCSQCNKWVSCRFCHDEEI-------DDHHFQREATQWILCTSCFHYQA 292
GC HY+R C++ CN+ CR CH+E D H R+ + ++C+ C Q
Sbjct: 17 GCKHYKRRCQIRAPCCNEVFDCRHCHNESTSTLRNIYDRHDLVRQDVKQVICSVCDTEQP 76
Query: 293 PSTHCDHCGIEFALYYCPICILYDNDETKDIYHCDKCGICRLGLGLGQDFFHCDQCDACL 352
+ C +CG+ Y+C ICI YD+D K +HCD CGICR +G ++FFHC +C +C
Sbjct: 77 AAQVCSNCGVNMGEYFCSICIFYDDDTEKQQFHCDDCGICR--VGGRENFFHCKKCGSCY 134
Query: 353 SIELLGNHKCIENSTRSNCPICREYMFTSTMAVVYMDPCGHAIHQHCFDEYIKH-SYKCP 411
++ L NH+C+ENS R +CPIC EY+F S M CGH +H C++E IK + CP
Sbjct: 135 AVGLRNNHRCVENSMRHHCPICYEYLFDSLKDTNVM-KCGHTMHVECYNEMIKRDKFCCP 193
Query: 412 NCNVSVINMEREFRILHQEIQDYRLPEPYCFWKCKVQCNDCRKKSMVDYHILGLCCQQCG 471
C+ SVI+M + ++ L +EI+ +P Y K + CNDC + V +HI+G C C
Sbjct: 194 ICSRSVIDMSKTWQRLDEEIEATAMPSDYRDKKVWILCNDCNDTTEVHFHIIGQKCGHCR 253
Query: 472 SYNTRQL 478
SYNTR +
Sbjct: 254 SYNTRAI 260
>At3g18290 [R] KOG1940 Zn-finger protein
Length = 1254
Score = 210 bits (535), Expect = 5e-54
Identities = 107/252 (42%), Positives = 144/252 (56%), Gaps = 10/252 (3%)
Query: 238 VRGCPHYQRNCKLLCSQCNKWVSCRFCHDEEIDDHHFQREATQWILCTSCFHYQAPSTHC 297
+ GC HY+RNCKL + C++ +CRFCHD+ + DH R+ +LC C Q C
Sbjct: 1003 IYGCEHYKRNCKLRAACCDQLFTCRFCHDK-VSDHSMDRKLVTEMLCMRCLKVQPVGPIC 1061
Query: 298 D--HC-GIEFALYYCPICILYDNDETKDIYHCDKCGICRLGLGLGQDFFHCDQCDACLSI 354
C G A +YC IC L+D++ +YHC C +CR+G GLG DFFHC C+ CL +
Sbjct: 1062 TTPSCDGFPMAKHYCSICKLFDDERA--VYHCPFCNLCRVGEGLGIDFFHCMTCNCCLGM 1119
Query: 355 ELLGNHKCIENSTRSNCPICREYMFTSTMAVVYMDPCGHAIHQHCFDEYIKHSYKCPNCN 414
+L+ NHKC+E S +NCPIC E++FTS+ AV + PCGH +H CF Y Y CP C
Sbjct: 1120 KLV-NHKCLEKSLETNCPICCEFLFTSSEAVRAL-PCGHYMHSACFQAYTCSHYTCPICG 1177
Query: 415 VSVINMEREFRILHQEIQDYRLPEPYCFWKCKVQCNDCRKKSMVDYHILGLCCQQCGSYN 474
S+ +M F +L + LPE Y + CNDC +K +H L C CGSYN
Sbjct: 1178 KSLGDMAVYFGMLDALLAAEELPEEYKNRCQDILCNDCERKGTTRFHWLYHKCGSCGSYN 1237
Query: 475 TRQL--ELIKPE 484
TR + E I P+
Sbjct: 1238 TRVIKSETIPPD 1249
>At1g74760 [R] KOG1940 Zn-finger protein
Length = 255
Score = 209 bits (533), Expect = 8e-54
Identities = 102/241 (42%), Positives = 139/241 (57%), Gaps = 7/241 (2%)
Query: 240 GCPHYQRNCKLLCSQCNKWVSCRFCHDEEIDDHHFQREATQWILCTSCFHYQAPSTHCDH 299
GC HY+RNCKLL C+K +C CHDEE D H R+ ++C C Q +C +
Sbjct: 20 GCNHYKRNCKLLAPCCDKLFTCIRCHDEEAD-HSVDRKQITKMMCMKCLLIQPIGANCSN 78
Query: 300 --CGIEFALYYCPICILYDNDETKDIYHCDKCGICRLGLGLGQDFFHCDQCDACLSIELL 357
C Y+C IC LYD++ + IYHC C +CR+G GLG D+FHC +C+AC+S L+
Sbjct: 79 TSCKSSMGKYFCKICKLYDDE--RKIYHCPYCNLCRVGKGLGIDYFHCMKCNACMSRTLV 136
Query: 358 GNHKCIENSTRSNCPICREYMFTSTMAVVYMDPCGHAIHQHCFDEYIKHSYKCPNCNVSV 417
H C E NCPIC EY+FTS+ V + PCGH +H CF EY Y CP C+ S+
Sbjct: 137 -EHVCREKCLEDNCPICHEYIFTSSSPVKAL-PCGHLMHSTCFQEYTCSHYTCPVCSKSL 194
Query: 418 INMEREFRILHQEIQDYRLPEPYCFWKCKVQCNDCRKKSMVDYHILGLCCQQCGSYNTRQ 477
+M+ F++L + + ++P+ Y + CNDC +K YH L C CGSYN+R
Sbjct: 195 GDMQVYFKMLDALLAEEKMPDEYSNKTQVILCNDCGRKGNAPYHWLYHKCTTCGSYNSRL 254
Query: 478 L 478
L
Sbjct: 255 L 255
>At3g62970 [R] KOG1940 Zn-finger protein
Length = 274
Score = 207 bits (527), Expect = 4e-53
Identities = 97/248 (39%), Positives = 140/248 (56%), Gaps = 27/248 (10%)
Query: 240 GCPHYQRNCKLLCSQCNKWVSCRFCHDEEIDD-------HHFQREATQWILCTSCFHYQA 292
GC HY+R CK+ CN SCR CH++ + H R+ + ++C+ C Q
Sbjct: 34 GCEHYKRRCKIRAPCCNLIFSCRHCHNDSANSLPDPKERHDLVRQNVKQVVCSICQTEQE 93
Query: 293 PSTHCDHCGIEFALYYCPICILYDNDETKDIYHCDKCGICRLGLGLGQD-FFHCDQCDAC 351
+ C +CG+ Y+C IC +D+D +K+ +HCD CGICR+G G+D FFHC C AC
Sbjct: 94 VAKVCSNCGVNMGEYFCDICKFFDDDISKEQFHCDDCGICRVG---GRDKFFHCQNCGAC 150
Query: 352 LSIELLGNHKCIENSTRSNCPICREYMFTSTMAVVYMDPCGHAIHQHCFDEYI-KHSYKC 410
+ L H CIENST+++CP+C EY+F S A M CGH +H CF++ I ++ Y+C
Sbjct: 151 YGMGLRDKHSCIENSTKNSCPVCYEYLFDSVKAAHVM-KCGHTMHMDCFEQMINENQYRC 209
Query: 411 PNCNVSVINMEREFRILHQEIQDYRLPEPYCFWKCKVQCNDCRKKSMVDYHILGLCCQQC 470
P C S+++M + +L E+ + CNDC K S +HILG C C
Sbjct: 210 PICAKSMVDMSPSWHLLDFEV--------------SILCNDCNKGSKAMFHILGHKCSDC 255
Query: 471 GSYNTRQL 478
GSYNTR++
Sbjct: 256 GSYNTRRI 263
>At5g22920 [R] KOG1940 Zn-finger protein
Length = 291
Score = 195 bits (495), Expect = 2e-49
Identities = 94/273 (34%), Positives = 144/273 (52%), Gaps = 12/273 (4%)
Query: 216 EYNFDPPEPTEEDKKDIDQIPGVRGCPHYQRNCKLLCSQCNKWVSCRFCHDE-----EID 270
+ F E +E ++ G GC HY+R CK+ C++ CR CH+E I+
Sbjct: 2 DMGFHENEQNQEFANLMEIGSGHYGCSHYRRRCKIRAPCCDEIFDCRHCHNEAKDSLHIE 61
Query: 271 DHH---FQREATQWILCTSCFHYQAPSTHCDHCGIEFALYYCPICILYDNDETKDIYHCD 327
HH R ++C+ C Q +C +CG+ Y+C C +D+D +K YHCD
Sbjct: 62 QHHRHELPRHEVSKVICSLCETEQDVQQNCSNCGVCMGKYFCSKCKFFDDDLSKKQYHCD 121
Query: 328 KCGICRLGLGLGQDFFHCDQCDACLSIELLGNHKCIENSTRSNCPICREYMFTSTMAVVY 387
+CGICR G ++FFHC +C C S + H+C+E + NCP+C EY+F ST +
Sbjct: 122 ECGICR--TGGEENFFHCKRCRCCYSKIMEDKHQCVEGAMHHNCPVCFEYLFDSTRDITV 179
Query: 388 MDPCGHAIHQHCFDEYIKHS-YKCPNCNVSVINMEREFRILHQEIQDYRLPEPYCFWKCK 446
+ CGH +H C + H+ Y CP C+ S+ +M ++ L +E+ Y +P+ Y
Sbjct: 180 L-RCGHTMHLECTKDMGLHNRYTCPVCSKSICDMSNLWKKLDEEVAAYPMPKMYENKMVW 238
Query: 447 VQCNDCRKKSMVDYHILGLCCQQCGSYNTRQLE 479
+ CNDC + V +H++ C CGSYNTRQ +
Sbjct: 239 ILCNDCGSNTNVRFHLIAHKCSSCGSYNTRQTQ 271
>7297117 [R] KOG1940 Zn-finger protein
Length = 496
Score = 194 bits (492), Expect = 5e-49
Identities = 91/225 (40%), Positives = 131/225 (57%), Gaps = 7/225 (3%)
Query: 255 CNKWVSCRFCHDEEIDDHHFQREATQWILCTSCFHYQAPSTHCDHCGIEFALYYCPICIL 314
CNK+ CRFCHDE + HHF R+ ++C+ C Q C +CG+ F Y C IC L
Sbjct: 261 CNKFYKCRFCHDEN-ETHHFDRKTLTELICSECNTRQTVREQCLNCGVRFGKYTCLICNL 319
Query: 315 YDNDETKDIYHCDKCGICRLGLGLGQDFFHCDQCDACLSIEL-LGNHKCIENSTRSNCPI 373
+D D K YHC CGICR+G ++FFHC+ C+ CL I+L + H+C+EN +RS+CP+
Sbjct: 320 FD-DADKQQYHCHGCGICRIGGA--ENFFHCEVCNMCLPIQLKIDGHRCVENISRSHCPV 376
Query: 374 CREYMFTSTMAVVYMDPCGHAIHQHCFDEYIKHS-YKCPNCNVSVINMEREFRILHQEIQ 432
C + TS + ++ CGH +H+ CFD+ + Y CP C S+I+M + L + +
Sbjct: 377 CLGDIHTSRIPC-HIPDCGHLLHKMCFDQLLASGHYTCPTCQTSLIDMTALWVYLDDQAE 435
Query: 433 DYRLPEPYCFWKCKVQCNDCRKKSMVDYHILGLCCQQCGSYNTRQ 477
+P Y + + CNDC K S +H +GL C CG+YNT Q
Sbjct: 436 RMPVPLKYENQRVHIFCNDCHKTSKTKFHFIGLKCVHCGAYNTTQ 480
>At1g18910 [R] KOG1940 Zn-finger protein
Length = 195
Score = 172 bits (437), Expect = 1e-42
Identities = 82/197 (41%), Positives = 110/197 (55%), Gaps = 6/197 (3%)
Query: 282 ILCTSCFHYQAPSTHCDH--CGIEFALYYCPICILYDNDETKDIYHCDKCGICRLGLGLG 339
++C C Q C + C YYC IC L+D+D ++IYHC C +CRLG GL
Sbjct: 1 MMCMKCMIIQPVGASCSNISCSSSMGKYYCKICKLFDDD--REIYHCPYCNLCRLGKGLS 58
Query: 340 QDFFHCDQCDACLSIELLGNHKCIENSTRSNCPICREYMFTSTMAVVYMDPCGHAIHQHC 399
D+FHC +C+AC+S L+ H C E NCPIC EY+FTS V + PCGH +H C
Sbjct: 59 IDYFHCMKCNACMS-RLIVEHVCREKCLEDNCPICHEYIFTSNSPVKAL-PCGHVMHSTC 116
Query: 400 FDEYIKHSYKCPNCNVSVINMEREFRILHQEIQDYRLPEPYCFWKCKVQCNDCRKKSMVD 459
F EY Y CP C+ S+ +M+ FR+L + + ++P+ Y + CNDC +K
Sbjct: 117 FQEYTCSHYTCPICSKSLGDMQVYFRMLDALLAEQKMPDEYLNQTQVILCNDCGRKGNAP 176
Query: 460 YHILGLCCQQCGSYNTR 476
YH L C C SYNTR
Sbjct: 177 YHWLYHKCSSCASYNTR 193
>At5g25560 [R] KOG1940 Zn-finger protein
Length = 272
Score = 138 bits (347), Expect = 3e-32
Identities = 79/248 (31%), Positives = 108/248 (42%), Gaps = 50/248 (20%)
Query: 240 GCPHYQRNCKLLCSQCNKWVSCRFCHDE------EIDD---HHFQREATQWILCTSCFHY 290
GCPHY+R C + CN+ C CH E +D H R + ++C C
Sbjct: 62 GCPHYRRRCCIRAPCCNEIFGCHHCHYEAKQNNINVDQKQRHDIPRHQVEQVICLLCGTE 121
Query: 291 QAPSTHCDHCGIEFALYYCPICILYDNDETKDIYHCDKCGICRLGLGLGQDFFHCDQCDA 350
Q C HCG+ Y+ C +C+L + D
Sbjct: 122 QEVGQICIHCGVCMGKYF--------------------CKVCKL---------YDDD--- 149
Query: 351 CLSIELLGNHKCIENSTRSNCPICREYMFTSTMAVVYMDPCGHAIHQHCFDEYIKH-SYK 409
H C+E + +CPIC E++F S V + PCGH IHQ C +E H Y
Sbjct: 150 -------NGHPCVEGAMHHDCPICFEFLFESRNDVTVL-PCGHTIHQKCLEEMRDHYQYA 201
Query: 410 CPNCNVSVINMEREFRILHQEIQDYRLPEPYCFWKCKVQCNDCRKKSMVDYHILGLCCQQ 469
CP C+ SV +M + + EI +PEPY ++ CNDC KK+ V YH++ C
Sbjct: 202 CPLCSKSVCDMSKVWEKFDMEIAATPMPEPYQNRMVQILCNDCGKKAEVQYHVVAQKCPN 261
Query: 470 CGSYNTRQ 477
C SYNTRQ
Sbjct: 262 CKSYNTRQ 269
>ECU11g0340 [R] KOG1940 Zn-finger protein
Length = 254
Score = 137 bits (345), Expect = 5e-32
Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 10/188 (5%)
Query: 241 CPHYQRNCKLLCSQCNKWVSCRFCHDEEIDDHHFQREATQWILCTSCFHYQAPSTHCDHC 300
C HY NC + C+ CR CHD+ + H R I+C +C Q + C C
Sbjct: 10 CEHYSNNCLVRFECCSSLYPCRLCHDKA-EAHRANRYEVSQIVCGTCNLLQPKTQTCLQC 68
Query: 301 GIEFALYYCPICILYDNDETKDIYHCDKCGICRLGLGLGQDFFHCDQCDACLSIELLGNH 360
+ Y+C C L+D+ + + I+HCD C +CR G + FHCD C CL +H
Sbjct: 69 LAAVSKYFCSKCNLWDSSDDQ-IFHCDGCNVCRRGDP--KSSFHCDICQTCLVTRGPRDH 125
Query: 361 KCIENSTRSNCPICREYMFTSTMAVVYMDPCGHAIHQHCFDEYIKHSYKCPNC-----NV 415
+EN+ NCPIC E M + +M V+ + CGH++H+ CF+E+IK +Y CP C +
Sbjct: 126 THVENTASGNCPICAEEM-SESMEVLVLLRCGHSLHERCFNEFIKETYTCPMCSKPIGDT 184
Query: 416 SVINMERE 423
S+IN + E
Sbjct: 185 SIINRKVE 192
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.134 0.423
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,466,702
Number of Sequences: 60738
Number of extensions: 1944693
Number of successful extensions: 6501
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 6415
Number of HSP's gapped (non-prelim): 11
length of query: 650
length of database: 30,389,216
effective HSP length: 113
effective length of query: 537
effective length of database: 23,525,822
effective search space: 12633366414
effective search space used: 12633366414
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)