ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV4907 check: MH R KOG0974 General function prediction only WD-repeat protein WDR6, WD repeat superfamily
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV4907 1680775 1683744 990
(990 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL183c [R] KOG0974 WD-repeat protein WDR6 WD repeat superfamily 874 0.0
SPBC1306.02 [R] KOG0974 WD-repeat protein WDR6 WD repeat superfa... 221 4e-57
At4g01860 [R] KOG0974 WD-repeat protein WDR6 WD repeat superfamily 106 2e-22
Hs11072093 [R] KOG0974 WD-repeat protein WDR6 WD repeat superfamily 97 2e-19
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 85 5e-16
At4g02730 [R] KOG0266 WD40 repeat-containing protein 72 3e-12
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 68 8e-11
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 67 1e-10
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 67 1e-10
Hs13376840 [R] KOG4155 FOG: WD40 repeat 67 2e-10
SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 66 3e-10
CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 65 5e-10
At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 65 5e-10
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 64 9e-10
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 64 2e-09
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 63 2e-09
7290331 [R] KOG0266 WD40 repeat-containing protein 63 2e-09
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 63 3e-09
CE17845 [R] KOG0286 G-protein beta subunit 62 3e-09
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 62 6e-09
ECU01g1290 [U] KOG0292 Vesicle coat complex COPI alpha subunit 62 6e-09
At3g49660 [R] KOG0266 WD40 repeat-containing protein 62 6e-09
YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 61 8e-09
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 61 8e-09
At5g49430 [R] KOG0644 Uncharacterized conserved protein contains... 61 1e-08
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 61 1e-08
YDR267c [R] KOG0645 WD40 repeat protein 60 1e-08
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 60 1e-08
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 60 1e-08
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 60 1e-08
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 60 1e-08
SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein 60 2e-08
SPBC3D6.12 [A] KOG0306 WD40-repeat-containing subunit of the 18S... 60 2e-08
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 60 2e-08
7292737 [A] KOG0285 Pleiotropic regulator 1 60 2e-08
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 59 4e-08
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 59 4e-08
7290895 [R] KOG0286 G-protein beta subunit 59 4e-08
YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 59 5e-08
YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 59 5e-08
Hs5174447 [T] KOG0279 G protein beta subunit-like protein 59 5e-08
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 59 5e-08
YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 58 6e-08
Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S... 58 6e-08
Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein 58 6e-08
Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 58 6e-08
Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 58 6e-08
Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 58 6e-08
CE29339 [S] KOG0295 WD40 repeat-containing protein 58 6e-08
YKL021c [S] KOG0294 WD40 repeat-containing protein 58 8e-08
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 58 8e-08
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 58 8e-08
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 58 8e-08
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 58 8e-08
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 57 1e-07
SPAC4D7.05 [JT] KOG0643 Translation initiation factor 3 subunit ... 57 1e-07
At3g18130 [T] KOG0279 G protein beta subunit-like protein 57 1e-07
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 57 1e-07
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 57 1e-07
At1g48630 [T] KOG0279 G protein beta subunit-like protein 57 1e-07
At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S ... 57 1e-07
7290824 [DK] KOG0973 Histone transcription regulator HIRA WD rep... 57 1e-07
Hs4759276 [A] KOG0299 U3 snoRNP-associated protein (contains WD4... 57 2e-07
Hs4505895 [A] KOG0285 Pleiotropic regulator 1 57 2e-07
At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein 57 2e-07
7297305 [T] KOG0279 G protein beta subunit-like protein 57 2e-07
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 56 2e-07
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 56 2e-07
At2g47410 [R] KOG0644 Uncharacterized conserved protein contains... 56 2e-07
At1g18080 [T] KOG0279 G protein beta subunit-like protein 56 2e-07
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 56 3e-07
Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 56 3e-07
CE06574 [R] KOG0266 WD40 repeat-containing protein 56 3e-07
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 55 4e-07
SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein 55 4e-07
At5g13840 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 55 4e-07
At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i... 55 4e-07
7302600 [R] KOG4155 FOG: WD40 repeat 55 4e-07
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 55 4e-07
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 55 5e-07
7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 55 5e-07
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 55 7e-07
Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 55 7e-07
Hs22057360 [S] KOG1408 WD40 repeat protein 55 7e-07
ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 55 7e-07
CE11748 [R] KOG0266 WD40 repeat-containing protein 55 7e-07
At3g18140 [R] KOG0315 G-protein beta subunit-like protein (conta... 55 7e-07
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 55 7e-07
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 55 7e-07
7302979 [S] KOG0295 WD40 repeat-containing protein 55 7e-07
7299285 [R] KOG4155 FOG: WD40 repeat 55 7e-07
CE29560 [S] KOG0300 WD40 repeat-containing protein 54 9e-07
CE26861 [S] KOG0300 WD40 repeat-containing protein 54 9e-07
At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein 54 9e-07
At3g16650 [A] KOG0285 Pleiotropic regulator 1 54 9e-07
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 54 9e-07
CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 54 1e-06
At2g22040 [R] KOG0315 G-protein beta subunit-like protein (conta... 54 1e-06
7294830 [K] KOG0263 Transcription initiation factor TFIID subuni... 54 1e-06
YBR103w [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 54 2e-06
SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1 54 2e-06
At5g50230 [R] KOG0288 WD40 repeat protein TipD 54 2e-06
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 54 2e-06
SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 53 2e-06
SPAC343.04c [S] KOG0293 WD40 repeat-containing protein 53 2e-06
CE20751 [S] KOG0308 Conserved WD40 repeat-containing protein 53 2e-06
CE03286 [S] KOG0308 Conserved WD40 repeat-containing protein 53 2e-06
Hs14150011_2 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 53 2e-06
ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID sub... 53 3e-06
CE06090 [T] KOG0279 G protein beta subunit-like protein 53 3e-06
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 53 3e-06
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 53 3e-06
CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit 53 3e-06
YDL145c [U] KOG0292 Vesicle coat complex COPI alpha subunit 52 3e-06
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 52 3e-06
Hs11321585 [R] KOG0286 G-protein beta subunit 52 3e-06
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 52 3e-06
CE06118 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 re... 52 3e-06
At2g46280 [JT] KOG0643 Translation initiation factor 3 subunit i... 52 3e-06
7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 52 3e-06
YCR084c [R] KOG0266 WD40 repeat-containing protein 52 5e-06
Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 52 5e-06
CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein 52 5e-06
7303130 [R] KOG0645 WD40 repeat protein 52 5e-06
7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 52 5e-06
At2g26060 [R] KOG0645 WD40 repeat protein 52 6e-06
7302720 [R] KOG0266 WD40 repeat-containing protein 52 6e-06
7296910 [JT] KOG0643 Translation initiation factor 3 subunit i (... 52 6e-06
7296030_1 [S] KOG1408 WD40 repeat protein 52 6e-06
SPBPJ4664.04 [U] KOG0292 Vesicle coat complex COPI alpha subunit 51 8e-06
Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 51 8e-06
CE25603 [JT] KOG0643 Translation initiation factor 3 subunit i (... 51 8e-06
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 51 8e-06
7290304 [S] KOG0310 Conserved WD40 repeat-containing protein 51 8e-06
Hs7108333_2 [R] KOG4155 FOG: WD40 repeat 51 8e-06
Hs4502123_2 [R] KOG4155 FOG: WD40 repeat 51 8e-06
>YPL183c [R] KOG0974 WD-repeat protein WDR6 WD repeat superfamily
Length = 1013
Score = 874 bits (2258), Expect = 0.0
Identities = 463/1018 (45%), Positives = 655/1018 (63%), Gaps = 37/1018 (3%)
Query: 2 LQKLNHVGPSLAVKFYEKWCLCSQGPFIEVFDYSNGSSINRCHIFHRNKVHGISIDKTSG 61
++ L+H GP+L VKFY + L GPFI V+DY + + IN+C +FH NKVHG+S+ + G
Sbjct: 1 MKDLSHYGPALCVKFYNDYVLAGYGPFIHVYDYHSATLINKCRLFHYNKVHGLSLS-SEG 59
Query: 62 NVLVYGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVLIID 121
+L YG+RS +IV + D+ K ++D E++ +WI FSF+ +IYLLT YN+VLI D
Sbjct: 60 KILAYGARSVTIVELEDVLKKESLVDFERINSDWITGATFSFDNLQIYLLTCYNKVLICD 119
Query: 122 PDNFTVKSTHFVEGERSILYSGSIKVLR-HKVLVNAGTIMNGIIVWELDSKKKIHTLRGH 180
N V + GERSILYSG IKV KV VNAGT+M G+I+W+L S+ KIH L GH
Sbjct: 120 L-NCEVLFRKSLGGERSILYSGIIKVFGPDKVYVNAGTVMGGVIIWDLFSETKIHNLLGH 178
Query: 181 EGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLIS 240
EGSIFYV SNNG+ +ASCSDDRSI +WD+ +GK LS W HTARIWNL FF++D++LIS
Sbjct: 179 EGSIFYVNLSNNGRYVASCSDDRSIRLWDLETGKQLSVGWSHTARIWNLMFFDNDSKLIS 238
Query: 241 VSEDCTCRVWNYKND-----ELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLKVT 295
VSEDCTCRVWN EL+I +++E HL K++WGVDV++ +IA++ GNDGRLK+
Sbjct: 239 VSEDCTCRVWNIIESRENVAELSISNVYEVHLIKSIWGVDVKDDEMIAVTSGNDGRLKLI 298
Query: 296 ELVPHNRSCNIE--LSLESISEQCDGFIHKANEIVKGFHWFDFGLVLITSEGNILEYLQN 353
+L+ R + E SL+ I++QC G I + NE +KGF WF FG++ ITS G IL+Y
Sbjct: 299 DLLQLKRHGDEETSFSLDDIAKQC-GDIFEKNESIKGFQWFSFGVIAITSLGKILKYSDV 357
Query: 354 IEEWKFLDYDDRFFSFSITQG--NENTIFFMNNKCLLTSFKFDK-FGSVLQKVDYELELL 410
++WK L +++F S+ IT G +N F NNK + KF K +++ ++ L+ L
Sbjct: 358 TKQWKLLLTNEKFNSYPITNGIQTQNIAVFSNNKSDILLIKFSKDSADIIETEEFHLDEL 417
Query: 411 TKTVNCLSVRH-TAHFYLIIESPNPRDPLLMLKFNHGSCAPTERYTFSKPENMISSCAEV 469
+KT NCL + F L ++SPNPR+ + L+ + + ++ F+KPEN SSC
Sbjct: 418 SKTNNCLVTEYDDDSFLLTLQSPNPREKFVCLEISLQNLKIKSKHCFNKPENFSSSCLTS 477
Query: 470 HNNRLLVGARFSLAFIFDLASETKPPIVV-KTQAADAITSINYLETTENDALFSMTNRDG 528
N +LVG+RFS I++L E++ P ++ + D TSI ++E +N A+FS+TNRDG
Sbjct: 478 FRNHILVGSRFSTLVIYNLLDESEEPFIIRRLSPGDTTTSIEFVEDKDNSAVFSVTNRDG 537
Query: 529 TYFFVAVDFRS-------SVYKTIHANKISRGFLEGSFYDSNDDFFVYGFKSNLFHIYNE 581
Y F+ + S YK +H+NK+ +GFLEG+F++S ++ YGFKS+LF++YNE
Sbjct: 538 YYVFIELTKNSLEEGPYRLSYKVLHSNKMMKGFLEGAFFNSKGEYITYGFKSSLFYLYNE 597
Query: 582 SQQYEVFSQPCGGAHRQWKLFGSQEQQQVLCFVKNSTLNITKIPKGKYPGALKNGTHGRE 641
+ YE+ S+ CGG+HR W L VL ++K S ++ KI P L+NG HGRE
Sbjct: 598 TNCYELASEVCGGSHRLWNL-AKITDGHVLMYIKASRFHLRKIYNSIVPETLENGVHGRE 656
Query: 642 IRDISFRKRSN-----YCKENLLFITGSEDTTVKLSSINSETGAIQNFWTLKSHVSGLQR 696
IRDIS SN K+ +F T SEDTT+KL N+ TG +QNFWT + HVSGLQR
Sbjct: 657 IRDISICPVSNTNTNDNFKDGHIFCTASEDTTIKLGYFNNRTGKVQNFWTQRKHVSGLQR 716
Query: 697 CKFICDNFFITCSAREELFLWELNDQFS-HPYVNLKQKLIPSMNNPDLRIMDFDVLFLNG 755
C+FI I+ SAREELFLWELND+++ PY+ ++Q L S NN DLRIMDFDV F++
Sbjct: 717 CQFINHKLMISSSAREELFLWELNDKYNKRPYMTIRQALPVSTNNSDLRIMDFDVKFIS- 775
Query: 756 DTCDFIMATVYSDSSVKVWHYFNEQNSFTLIIDGRYETCCIWNVAFIPLQNCLKLLIAPT 815
+ DF++ TVYSDS++K+WHY QN F LI+ GRY+TCC++NV FI L+ L ++I+PT
Sbjct: 776 QSGDFLLVTVYSDSTIKIWHYRENQNKFDLIMQGRYKTCCLFNVVFIALKEELLVVISPT 835
Query: 816 DGHLITWDITNSVPFEIR--NNELFDRGLKLETKQLQNWSEKILVHTAGIXXXXXXXXXX 873
DGHL+ ++IT VPF + + +L D L L ++ VH +G+
Sbjct: 836 DGHLVVYNITEYVPFSVDPISGDLVDHKLDATISNLPAPVAQLPVHQSGVKSLDYVANAT 895
Query: 874 XXXXXXYSGGDDNAVAITKFTNNDNYTMKAEILDHDSYAASSTVTSVNLLDNDTKLLATS 933
+GGDDN + ++ +D+ + + D + AASST+TS L++ +++ TS
Sbjct: 896 RTSATILTGGDDNGLGLSNLKLDDSNKVTLKTSDFIAAAASSTITSGMLINGGKEVITTS 955
Query: 934 VDQVIRIRDITNDKLKITESKYTTVADTGSSDIVTL---PNVQKTLILIGGLGLSCWR 988
VDQVIR +IT KL + + K TTVADTGS +I++ + +KTL LIGG+GLS W+
Sbjct: 956 VDQVIRAWEITAGKLSLVDKKRTTVADTGSLEIISNDEDADSEKTL-LIGGVGLSIWK 1012
>SPBC1306.02 [R] KOG0974 WD-repeat protein WDR6 WD repeat superfamily
Length = 984
Score = 221 bits (563), Expect = 4e-57
Identities = 243/1015 (23%), Positives = 442/1015 (42%), Gaps = 117/1015 (11%)
Query: 1 MLQKLNHVGP--SLAVKFYEKWCLCSQGPFIEVFDYSNGSS----INRCHIFHRNKVHGI 54
+L+ +N VGP SLA+ +K+ C+QGP + ++D S I + N++HG+
Sbjct: 9 VLEPVNFVGPVTSLALIHNDKFLCCAQGPCLRIYDVSESRHESDLIKSILLPFHNRIHGM 68
Query: 55 SIDKTSGNVLVYGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSY 114
K + V+G F++V++ S+V +WI + + + ++TS
Sbjct: 69 LPCKQG--LFVWGGTYFAVVDVET----SQVYYDR--ISDWIFNAAELGEENKFCVVTSK 120
Query: 115 NRVLIIDPDNFTVKSTHFVEGERS-ILYSGSIKVLRHKVLVNAGTIMNGIIVWELD---- 169
N+V ++ + + T+ + E++ +L+ ++++ +++ + + + I VW+ +
Sbjct: 121 NQVHLLSLSKGSWEVTNTISCEKTPLLFCATVQISGNEIYIASASAFQQIYVWKFNYNNP 180
Query: 170 -SKKKIHT-LRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGK-LLSRAWGHTARI 226
S I T L GHEG+ F + S++G+ L S S+DR++ +W + S L++ +GH+AR+
Sbjct: 181 PSCVSIDTYLVGHEGACFDLKFSSDGRYLCSVSEDRTLRLWSIESSPFLIATGFGHSARV 240
Query: 227 WNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISG 286
W F + ++ +VSED T R+W + + LT + H K++W + V N I +G
Sbjct: 241 WRCVFL-PNKEIATVSEDLTLRLWTWNDKTLTNTYTYTGHRGKHIWSLVVSSANPIIYTG 299
Query: 287 GNDGRLKVTELVPHNRSCNIELSLESISEQCDGFIHKANEIVKGFHWFDFGLVLITSEGN 346
GNDG ++ + I+ S S+S + + ++ F + +L ++
Sbjct: 300 GNDGSVRSWDY-----KTRIQESCISVSS-----LFTSKTLLASFCFVKCQKLLCLAKNG 349
Query: 347 ILEYLQN-----------------IEEWKFLDYDDRFFSFSITQGNENTIFFMNNKCLLT 389
+ + N I WK + FF + + +F N LL
Sbjct: 350 EMSIIDNKGKKAIPALTTTSDMSIIRSWK-----NSFFVAAASNKGTIYVFSYQNTNLLK 404
Query: 390 SFKFDKFGSVLQKVDYELELLTKTVNCLSVRHTAHFYLIIESPNPRDPLLMLKFNHGSCA 449
+ + G + Q + Y+++ ++ V + E D K N S
Sbjct: 405 AIDLHR-GKIQQLLTYQVKERYFLLSKSFVGKNQFRVYLQEFDFEAD-----KVNLISTI 458
Query: 450 PTERYTFSKPENMISSCAEVHNNRLLVGARFSLAFIFDLASETKPPIVVKTQAADAITSI 509
E P ++ + E ++N L+G+R ++++ + + DAI+SI
Sbjct: 459 ELELPATFDPTSL--TVDEEYSN-FLIGSRTGSLALYNIGESNYLSVWRRIHEFDAISSI 515
Query: 510 NYLETTENDALFSMTNRDG--TYFFVAVDFRSSVYKTIHANKISRGFLEG----SFYDSN 563
+ + + L RDG F + +S+V + + + K G L G +
Sbjct: 516 HIKSSKRDYLLIQTVGRDGYVNLFSIPRVEKSAVPQELCSKKCCDGILSGGLCKKLKNGK 575
Query: 564 DDFFVYGFKSNLFHIYNESQQYEVFSQPCGGAHRQWKLFGSQEQQQVLCFVKNST-LNIT 622
++ +V+GF ++ F + +E+ + VF CGG+HR W + Q + N + T
Sbjct: 576 ENQWVWGFHASNFFLRDETNETNVFFIDCGGSHRPWAFSMEMDIQSFASYRANQLYIYST 635
Query: 623 KIPKGKYPGALKNGTHGREIRDISFRKRSNYCKENLLFITGSEDTTVKLSSINSETGAIQ 682
+ + L+NG HGREIR + F + L ++GSEDT V L S G I
Sbjct: 636 ALNLLQRNSVLQNGLHGREIRAMDFNPSGD------LLLSGSEDTKVTLLEFQS-NGNII 688
Query: 683 NFWTLKSHVSGLQRCKFICDNFFITCSAREELFLWELNDQFSHPYVNLKQKLIPSMNNP- 741
++K H SG+Q + D+ + EEL ++ L P LK+ + + P
Sbjct: 689 PLNSVKFHNSGIQSLTWFSDDILFSTGGLEELNVYRL---IQKPEAYLKRIVHEKLCKPN 745
Query: 742 --------DLRIMDFDVLFLN--GDTCDFIMATVYSDSSVKVWHYFNEQNSFTLIIDGRY 791
DLRI D V+ G+ +I TV SDS++K + Y + I +Y
Sbjct: 746 KSNKTYDGDLRITDISVVKATHLGERVLWI-NTVQSDSTIKAFTYNVDTKQLNCIKSWKY 804
Query: 792 ETCCIWNVAFIPLQNCLKLLIAPTDGHLITWDITNSVPFEIRNNELFDRGLKLETKQLQN 851
+T C+ + + L L++A TDG++ W+ F R ++E L
Sbjct: 805 KTVCLVFAEAVIFGSHLLLVVASTDGNVAIWN-------------TFWRDPQIE--PLII 849
Query: 852 WSEKILVHTAGIXXXXXXXXXXXXXXXXYSGGDDNAV--AITKFTNNDNYTMKAEILDHD 909
W + VH + +GGDD A+ +I ++ L H+
Sbjct: 850 WIK--TVHQFCVKSLNISRDQDVLTIS--TGGDDGAISRSILLLEQISENSVVVNSL-HN 904
Query: 910 SYAASSTVTSVNLLDNDTK--LLATSVDQVIRIRDITNDKLKITESKYTTVADTG 962
+ A + +SV + + TK LL+ S+DQ I + + D LK +YT VAD G
Sbjct: 905 YFFAEAHASSVTGVLSITKELLLSVSIDQRILLWKVEGDSLKPILERYTHVADVG 959
>At4g01860 [R] KOG0974 WD-repeat protein WDR6 WD repeat superfamily
Length = 1216
Score = 106 bits (264), Expect = 2e-22
Identities = 93/337 (27%), Positives = 156/337 (45%), Gaps = 58/337 (17%)
Query: 20 WCLCSQGPFIEVFDYSNGSSINRCHIFHRNKVHGI--------SIDKTSGNVLVYGSRSF 71
+ L G I ++D S+G I +F +VHG S ++ + ++++G +
Sbjct: 38 YLLAGSGSEILLYDLSSGELIRSFQVFEGVRVHGTVCSKSFVHSAERYTYKLVIFGEKKV 97
Query: 72 SIVN-INDLFSKS-------EVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVLIID-P 122
I + I +L S S E + W+ + F ++ L +++L I
Sbjct: 98 KIFSLIVELASSSGEISVNLENFESLPRLSNWVF--DVCFLQDSTGSLEEEDKLLAIGCS 155
Query: 123 DN----FTVKSTHFV----EGERSILYS-----GSIKVLRHKVLVNAGTIMNGIIVWE-- 167
DN + VK + ER +LY+ SI LR + +GTI N IIVW
Sbjct: 156 DNSLSIWDVKESRMAFEIQSPERCLLYTMRLWGDSISTLR----IASGTIFNEIIVWRAV 211
Query: 168 -LDSKKKIH---------TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLS 217
LD H L GHEGSIF + S +G + S SDDRS IW++ S +++
Sbjct: 212 GLDGDNVDHGHYSASHMLRLTGHEGSIFRIVWSLDGSKIVSVSDDRSARIWEIDSQEVVG 271
Query: 218 RA-WGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDV 276
+GH+ R+W+ D+ +++ EDCTCRVW +L ++ + H+ + +W
Sbjct: 272 PVLFGHSVRVWDCCI--SDSLIVTAGEDCTCRVWGVDGTQL---EVIKEHIGRGIWRCLY 326
Query: 277 EETNLIAISGGNDGRLKVTELVPHNRSCNIELSLESI 313
+ + + ++ G D +KV +L HNR E SL+++
Sbjct: 327 DPNSSLLVTAGFDSAIKVHQL--HNRGS--ETSLDAV 359
>Hs11072093 [R] KOG0974 WD-repeat protein WDR6 WD repeat superfamily
Length = 1121
Score = 96.7 bits (239), Expect = 2e-19
Identities = 186/938 (19%), Positives = 350/938 (36%), Gaps = 156/938 (16%)
Query: 22 LCSQGPFIEVFDYSNGSSINRC----HIFHRNKVHGISI-DKTSGN------VLVYGSRS 70
L +GP + V+ G + ++ +HG + + +G+ V V+GS+
Sbjct: 32 LAGEGPDVLVYSLDFGGHLRMIKRVQNLLGHYLIHGFRVRPEPNGDLDLEAMVAVFGSKG 91
Query: 71 FSIVNINDLFSKSEVLDQEKMTGEWIMSG---EFSFNKEEIYLLTSYNRVLIIDPDNFTV 127
+V I+ + + + + +G W MS + + + I L +N V++ DP +
Sbjct: 92 LRVVKIS--WGQGHFWELWR-SGLWNMSDWIWDARWLEGNIALALGHNSVVLYDPVVGCI 148
Query: 128 KSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVW----ELDSKKKI---HTLRGH 180
++ + I ++ + AG + N ++VW L K + + GH
Sbjct: 149 LQEVPCTDRCTLSSACLIGDAWKELTIVAGAVSNQLLVWYPATALADNKPVAPDRRISGH 208
Query: 181 EGSIFYVTTSNNGKLLASCSDDRSIIIWDM----VSG---KLLSRAWGHTARIWNLKFFN 233
G IF ++ + LLA+ S+DRS+ IW + V G + + +GH+AR+W +K
Sbjct: 209 VGIIFSMSYLESKGLLATASEDRSVRIWKVGDLRVPGGRVQNIGHCFGHSARVWQVKLL- 267
Query: 234 DDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLK 293
+ LIS EDC C VW+++ + I F H + + + E I+GG+D ++
Sbjct: 268 -ENYLISAGEDCVCLVWSHEGE---ILQAFRGHQGRGIRAIAAHERQAWVITGGDDSGIR 323
Query: 294 VTELVPHNRSCNIELSLESISEQCDGFIHKANEIVKGFHWFDFGLVLITSEGNILEYLQN 353
+ LV L + ++ + + W L+ +T G + Y
Sbjct: 324 LWHLVGRGYR---GLGVSALCFKSRSRPGTLKAVTLAGSW---RLLAVTDTGALYLYDVE 377
Query: 354 IEEWKFLDYDDRFFSFSITQGNENTIFFMNNKCLLTS----FKFDKFGSVLQKVDYELEL 409
++ W+ L D F S+ + + F C + + K + VD L
Sbjct: 378 VKCWEQLLEDKHFQSYCLLEAAPGPEGF--GLCAMANGEGRVKVVPINTPTAAVDQ--TL 433
Query: 410 LTKTVNCLSVRHTAHFYLIIESPNPRDPLLMLKFNHGSCAPTERYTFSK----------- 458
V+ LS + L++ + P + L+ S AP+ + F K
Sbjct: 434 FPGKVHSLSWALRGYEELLLLASGPGGVVACLEI---SAAPSGKAIFVKERCRYLLPPSK 490
Query: 459 ----------PENMISSCAEVHNNRLLVGARFSLAFIFDLASETK----PPIV--VKTQA 502
P C + + LL +R L + + + P+V +
Sbjct: 491 QRWHTCSAFLPPGDFLVCGDRRGSVLLFPSRPGLLKDPGVGGKARAGAGAPVVGSGSSGG 550
Query: 503 ADAITSINYLETTEN----DALFSMTNRDGTYFFVAVD-------FRSSVYKTIHANKIS 551
+A T + + T + + S+T G + D R + + K
Sbjct: 551 GNAFTGLGPVSTLPSLHGKQGVTSVTCHGGYVYTTGRDGAYYQLFVRDGQLQPVLRQKSC 610
Query: 552 RG--FLEGSFYDSNDDFFVYGFKSNLFHIYNESQQYEVFSQPCGGAHRQWKLFGSQEQQQ 609
RG +L G + + GF +N F ++N ++ CGG HR W F E
Sbjct: 611 RGMNWLAGLRIVPDGSMVILGFHANEFVVWNPRSHEKLHIVNCGGGHRSW-AFSDTEAAM 669
Query: 610 VLCFVKNSTLNITKIPKG--KYPGALKNGTHGREIRDI----------SFRKRSNYCKEN 657
++K+ + + + G + L+ G HGREI + + S ++
Sbjct: 670 AFAYLKDGDVMLYRALGGCTRPHVILREGLHGREITCVKRVGTITLGPEYGVPSFMQPDD 729
Query: 658 L-----------LFITGSEDTTVKLSSINSETGAIQNFWTLKSHVSGLQ----------- 695
L + IT SEDTTV + ++ + TG+ + +H+S ++
Sbjct: 730 LEPGSEGPDLTDIVITCSEDTTVCVLALPTTTGSAHALTAVCNHISSVRAVAVWGIGTPG 789
Query: 696 ------------------RCKFICDNFFIT----CSAREELFLWELNDQFSHPYVNLKQK 733
R + C + +T +R + L+ Y + ++
Sbjct: 790 GPQDPQPGLTAHVVSAGGRAEMHCFSIMVTPDPSTPSRLACHVMHLSSHRLDEYWDRQRN 849
Query: 734 LIPSMN-NPDLRIMDFDVLFLNGDTCDFIMATVYSDSSVKVWHYFNEQNSFTLIIDGRYE 792
+ +P+ R M V L+ ++A SD +V+++ + L+ + +
Sbjct: 850 RHRMVKVDPETRYMSLAVCELDQPGLGPLVAAACSDGAVRLFLLQDSGRILQLLAETFHH 909
Query: 793 TCCIWNVAFIP-----LQNCLKLLIAPTDGHLITWDIT 825
C+ V + L L A TDG L WD+T
Sbjct: 910 KRCVLKVHSFTHEAPNQRRRLLLCSAATDGSLAFWDLT 947
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 85.1 bits (209), Expect = 5e-16
Identities = 67/222 (30%), Positives = 110/222 (49%), Gaps = 12/222 (5%)
Query: 99 GEFSFNKEEIYLLTSYNRVL-IIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAG 157
G F + + ++ + V+ I+D + +VKST +EGE L + ++ K+L +AG
Sbjct: 23 GPFIVSSDGSFIACACGDVINIVDSTDSSVKST--IEGESDTLTALALSP-DDKLLFSAG 79
Query: 158 TIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLS 217
I VW+L++ K I + +GHEG + + +G LLA+ DR +++WD+ G
Sbjct: 80 HSRQ-IRVWDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTH 138
Query: 218 RAWGHTARIWNLKFFNDDTQ--LISVSEDCTCRVW--NYKNDELTIKDIFESHLTKNVWG 273
GH + ++ F D + LIS S+D T RVW N KN E I E H + V
Sbjct: 139 YFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSA-VTS 197
Query: 274 VDVEETNLIAISGGNDGRLKVTELVPHNRSCNIELSLESISE 315
+ + E L S G D + + +L H+ SC ++ + E
Sbjct: 198 IALSEDGLTLFSAGRDKVVNLWDL--HDYSCKATVATYEVLE 237
Score = 72.8 bits (177), Expect = 3e-12
Identities = 63/242 (26%), Positives = 106/242 (43%), Gaps = 20/242 (8%)
Query: 59 TSGNVLVYGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVL 118
+SGNVL+ V + + SKS + G+ I++ F+ ++ S +R L
Sbjct: 413 SSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGD-ILAVAFAKKSFSFFVSGSGDRTL 471
Query: 119 II-----------DPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVWE 167
+ +P N +S ++ I S+ V R+ LV G+ +W
Sbjct: 472 KVWSLDGISEDSEEPINLKTRSV-VAAHDKDI---NSVAVARNDSLVCTGSEDRTASIWR 527
Query: 168 LDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIW 227
L + TL+GH+ IF V S + + + S D+++ IW + G L GHT+ +
Sbjct: 528 LPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVL 587
Query: 228 NLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDV-EETNLIAISG 286
F D TQ +S D ++WN E ++ H K VW + V ++T +IA G
Sbjct: 588 RASFITDGTQFVSCGADGLLKLWNVNTSECIA--TYDQHEDK-VWALAVGKKTEMIATGG 644
Query: 287 GN 288
G+
Sbjct: 645 GD 646
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 72.4 bits (176), Expect = 3e-12
Identities = 46/143 (32%), Positives = 77/143 (53%), Gaps = 5/143 (3%)
Query: 155 NAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGK 214
NAGT N I + + TL GH +I V SN+G LLAS S D+++I+W +
Sbjct: 20 NAGTSGNVPIY---KPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYS 76
Query: 215 LLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGV 274
L+ R GH++ I +L + +D S S+DCT R+W+ ++ +K + H T V+ V
Sbjct: 77 LIHRYEGHSSGISDLAWSSDSHYTCSASDDCTLRIWDARSPYECLK-VLRGH-TNFVFCV 134
Query: 275 DVEETNLIAISGGNDGRLKVTEL 297
+ + + +SG D +++ E+
Sbjct: 135 NFNPPSNLIVSGSFDETIRIWEV 157
Score = 54.3 bits (129), Expect = 9e-07
Identities = 27/90 (30%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 165 VWELDSKKK-IHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHT 223
+W+ S + + LRGH +F V + L+ S S D +I IW++ +GK + H+
Sbjct: 111 IWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHS 170
Query: 224 ARIWNLKFFNDDTQLISVSEDCTCRVWNYK 253
I ++ F D + ++S S D +C++W+ K
Sbjct: 171 MPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 67.8 bits (164), Expect = 8e-11
Identities = 61/257 (23%), Positives = 105/257 (40%), Gaps = 19/257 (7%)
Query: 43 CHIFHRNKVHGISIDKTSGNVLVYGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFS 102
C + +S K G L+Y V + D+ S+ ++ K W+
Sbjct: 270 CQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWV------ 323
Query: 103 FNKEEIYLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLR-----HKVLVNAG 157
+ L T Y L I + T K E + K+ + +++V A
Sbjct: 324 ---NHLSLSTDY--ALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGNSEEMMVTAS 378
Query: 158 TIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLS 217
+ L S K I + GH+ + +V S +G+ + S S D SI +WD GK +S
Sbjct: 379 DDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRDGKFIS 438
Query: 218 RAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVE 277
GH A ++ + + +D L+S S+D T +VW+ + +L++ H V+ VD
Sbjct: 439 TFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVD--LPGH-KDEVYTVDWS 495
Query: 278 ETNLIAISGGNDGRLKV 294
SGG D +++
Sbjct: 496 VDGKRVCSGGKDKMVRL 512
Score = 58.2 bits (139), Expect = 6e-08
Identities = 29/92 (31%), Positives = 50/92 (53%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
N I +W+ K I T RGH S++ V S++ +LL SCS D ++ +WD+ + KL
Sbjct: 424 NSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLP 483
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNY 252
GH ++ + + D ++ S +D R+W +
Sbjct: 484 GHKDEVYTVDWSVDGKRVCSGGKDKMVRLWTH 515
Score = 57.4 bits (137), Expect = 1e-07
Identities = 53/217 (24%), Positives = 103/217 (47%), Gaps = 22/217 (10%)
Query: 101 FSFNKEEIYLLTSYNRVLIIDPDNFTVKSTHFVEGERS-ILYSGSIKVLRHKVLVNAGTI 159
++ +++I LL + V + P +S+ + G S IL S +++ AG
Sbjct: 110 YNSTEDQITLLYTPRAVFKVKP---VTRSSSAIAGHGSTILCSAFAPHTSSRMVTGAGD- 165
Query: 160 MNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRA 219
N +W+ D++ +HTL+GH + V+ S +G+++A+ S D +I +WD SG+ L A
Sbjct: 166 -NTARIWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDA 224
Query: 220 W-GHTARIWNLKFF-------NDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNV 271
GH+ I +L + +L S S+D T ++W+ T+ + + ++ +
Sbjct: 225 LRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWD------TVSRVCQYTMSGHT 278
Query: 272 WGVDVEE--TNLIAISGGNDGRLKVTELVPHNRSCNI 306
V + + SG +D ++V ++ R NI
Sbjct: 279 NSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINI 315
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 67.0 bits (162), Expect = 1e-10
Identities = 41/133 (30%), Positives = 67/133 (49%), Gaps = 4/133 (3%)
Query: 163 IIVWE-LDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWG 221
+ +W + KK + + GH+ I V S + +++AS S D+SI +WD +GK L+ G
Sbjct: 353 LFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRG 412
Query: 222 HTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNL 281
H A ++ + + D L+S S D T +VW+ K +L + H V+ VD
Sbjct: 413 HVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAMD--LPGH-ADEVYAVDWSPDGQ 469
Query: 282 IAISGGNDGRLKV 294
SGG D L++
Sbjct: 470 RVASGGKDKCLRI 482
Score = 52.8 bits (125), Expect = 3e-06
Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 14/154 (9%)
Query: 111 LTSYNRV-------LIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVL-------VNA 156
L+ YN V L+ D+FT+ E ++ + + L ++VL V +
Sbjct: 330 LSRYNLVRGQGPERLVSGSDDFTLFLWSPAEDKKPLTRMTGHQALINQVLFSPDSRIVAS 389
Query: 157 GTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLL 216
+ I +W+ + K + +LRGH +++ + S + +LL S S D ++ +WD+ + KL
Sbjct: 390 ASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLA 449
Query: 217 SRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVW 250
GH ++ + + D ++ S +D R+W
Sbjct: 450 MDLPGHADEVYAVDWSPDGQRVASGGKDKCLRIW 483
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 67.0 bits (162), Expect = 1e-10
Identities = 41/138 (29%), Positives = 61/138 (43%), Gaps = 8/138 (5%)
Query: 157 GTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLL 216
G+ + +W + GH G + + S NGK LAS +D+ + +WD+ SG L
Sbjct: 444 GSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 217 SRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTI-KDIFESHLT------- 268
GHT I +L F D + S S D + RVW+ +N + D S L
Sbjct: 504 KELRGHTDNITSLTFSPDSGLIASASMDNSVRVWDIRNTYCSAPADGSSSELVGVYTGQM 563
Query: 269 KNVWGVDVEETNLIAISG 286
NV V NL+ ++G
Sbjct: 564 SNVLSVQFMACNLLLVTG 581
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 66.6 bits (161), Expect = 2e-10
Identities = 49/157 (31%), Positives = 73/157 (46%), Gaps = 9/157 (5%)
Query: 138 SILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLA 197
SI YS K L +G I I ++++ + K +HTL GH I +T S + +LL
Sbjct: 153 SIAYSPDGKYLA------SGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 206
Query: 198 SCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDEL 257
+ SDD I I+D+ L GH + + N+ F DDT +S S D + +VW+
Sbjct: 207 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDV--GTR 264
Query: 258 TIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLKV 294
T F H VWGV +S G+D + +
Sbjct: 265 TCVHTFFDH-QDQVWGVKYNGNGSKIVSVGDDQEIHI 300
>SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 605
Score = 65.9 bits (159), Expect = 3e-10
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 16/192 (8%)
Query: 106 EEIYLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYS-----GSIKVLRHKVLVNAGTIM 160
+ + LT + +L+ + TVK HF G+R L S++++R + LV +G+
Sbjct: 354 DSVLCLTFDSTLLVSGSADCTVKLWHFSGGKRITLRGHTGPVNSVRIIRDRGLVLSGSDD 413
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
+ I +W L++ +HT H G + + +++ L SCS D +I WD+ K + +
Sbjct: 414 STIKIWSLETNTCLHTFSAHIGPVQSLALADS--RLFSCSLDGTIKQWDIEKKKCVHTLF 471
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETN 280
GH +W + D +LIS + D +VW T+K+ E + + +V
Sbjct: 472 GHIEGVWEIA--ADHLRLISGAHDGVVKVWEACECVHTLKNHSEPVTSVALGDCEV---- 525
Query: 281 LIAISGGNDGRL 292
+SG DG++
Sbjct: 526 ---VSGSEDGKI 534
Score = 54.3 bits (129), Expect = 9e-07
Identities = 50/178 (28%), Positives = 83/178 (46%), Gaps = 14/178 (7%)
Query: 153 LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVS 212
L+ +G+ + +W K+I TLRGH G + V + L+ S SDD +I IW + +
Sbjct: 365 LLVSGSADCTVKLWHFSGGKRI-TLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLET 423
Query: 213 GKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVW 272
L H + +L D++L S S D T + W+ + + + +F H+ + VW
Sbjct: 424 NTCLHTFSAHIGPVQSLAL--ADSRLFSCSLDGTIKQWDIEKKK-CVHTLF-GHI-EGVW 478
Query: 273 GVDVEETNLIAISGGNDGRLKVTELVPHNRSCNIELSLESISEQCDGFIHKANEIVKG 330
+ + L ISG +DG +KV E +C +L++ SE E+V G
Sbjct: 479 EIAADHLRL--ISGAHDGVVKVWE------ACECVHTLKNHSEPVTSVALGDCEVVSG 528
>CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 793
Score = 65.1 bits (157), Expect = 5e-10
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 145 IKVLRHKVLVNAGTIMNGIIVWELDSKKK----IHTLRGHEGSIFYVTTSNNGKLLASCS 200
+ + L+ G + + +W++D+ K TL GH + V + N LASCS
Sbjct: 483 VDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGDVKFAKNSHKLASCS 542
Query: 201 DDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIK 260
D +I IW++ L GH+ ++ + F +D+QLIS ++W K +
Sbjct: 543 GDMTIKIWNISEKSCLQTISGHSCAVFRVIFARNDSQLISADSAGIIKIWTIKTADCECS 602
Query: 261 DIFESHLTKNVWGVDVEETNLIAISGGNDGRLKV 294
++H T +W + ++ G DGR+ V
Sbjct: 603 --IDAH-TDKIWSLSKNHNESEFVTAGTDGRIVV 633
Score = 51.2 bits (121), Expect = 8e-06
Identities = 49/160 (30%), Positives = 72/160 (44%), Gaps = 30/160 (18%)
Query: 177 LRGHEGSIFYVTTSN-NGKLLASCSDDRSIIIWDMVSGK---------LLSRAWGHTARI 226
+RGH S+ V + + LLASCS D SII W +V+ ++ A GH +
Sbjct: 356 IRGHTESVLSVVSPTWDTSLLASCSKDNSIIFWRLVTSPENDSCSTLVPVAAATGHANTV 415
Query: 227 WNLKFFNDDTQ--LISVSEDCTCRVW----NYKNDELTI---KDIFES--HLT------- 268
L N L SVS DCT ++W + K E+ I KD E LT
Sbjct: 416 TALAISNTGRAPFLASVSTDCTIKLWGLGVSTKLKEVKIDAEKDFVEQLPKLTCSSTMVA 475
Query: 269 --KNVWGVDVEETNLIAISGGNDGRLKVTELVPHNRSCNI 306
K+V VD+ E++ + +GG D +K+ ++ H I
Sbjct: 476 HGKDVNCVDISESDALIATGGMDKLVKLWQVDTHKMQLGI 515
>At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 65.1 bits (157), Expect = 5e-10
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 153 LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVS 212
LV G I +W+ + H+G++ + + G +LAS S D II+WD+V
Sbjct: 78 LVAVGYADGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKVGSMLASGSKDNDIILWDVVG 137
Query: 213 GKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVW 272
L R GH ++ +L F + +L+S S+D RVW+ + I H ++ VW
Sbjct: 138 ESGLFRLRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQH--CMQIVSGHHSE-VW 194
Query: 273 GVDVEETNLIAISGGNDGRLK 293
VD + ++G D L+
Sbjct: 195 SVDTDPEERYVVTGSADQELR 215
Score = 56.2 bits (134), Expect = 2e-07
Identities = 34/147 (23%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 141 YSGSIKVLRHKV---LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLA 197
+ G++ LR+ ++ +G+ N II+W++ + + LRGH + + + GK L
Sbjct: 105 HKGAVTALRYNKVGSMLASGSKDNDIILWDVVGESGLFRLRGHRDQVTDLVFLDGGKKLV 164
Query: 198 SCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCR---VWNYKN 254
S S D+ + +WD+ + + GH + +W++ ++ +++ S D R V Y +
Sbjct: 165 SSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAVKEYSS 224
Query: 255 DELTIKD-------IFESHLTKNVWGV 274
+ + D E H T+N W +
Sbjct: 225 NGSLVSDSNANEIKASEEHSTENKWEI 251
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 64.3 bits (155), Expect = 9e-10
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 163 IIVWELD-SKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWG 221
+I+W+ S K I + GH+ + + + S +G+ +A+ S D S+ +WD +GK L+ G
Sbjct: 370 LILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDSSVRLWDGKTGKFLATLRG 429
Query: 222 HTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNL 281
H A ++ + D L+S S+D T +VW+ ++ ++ K H V+ VD
Sbjct: 430 HVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKM--KFDLPGH-EDQVFAVDWSPDGQ 486
Query: 282 IAISGGNDGRLKV 294
SGG D +++
Sbjct: 487 RVASGGADKAVRI 499
Score = 52.0 bits (123), Expect = 5e-06
Identities = 24/92 (26%), Positives = 50/92 (54%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
+ + +W+ + K + TLRGH +++ S + +LL S S D ++ +WD+ S K+
Sbjct: 411 SSVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLP 470
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNY 252
GH +++ + + D ++ S D R+W++
Sbjct: 471 GHEDQVFAVDWSPDGQRVASGGADKAVRIWSH 502
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 63.5 bits (153), Expect = 2e-09
Identities = 32/98 (32%), Positives = 56/98 (56%)
Query: 154 VNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSG 213
V +G+ I +W++ K + RGH ++ + S +GK LAS +DD ++ +WD+ +G
Sbjct: 120 VASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG 179
Query: 214 KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWN 251
K++S GHT + ++F ++ L S S D T R W+
Sbjct: 180 KMMSEFPGHTGPVNVVEFHPNEYLLASGSSDGTIRFWD 217
Score = 61.6 bits (148), Expect = 6e-09
Identities = 42/154 (27%), Positives = 78/154 (50%), Gaps = 3/154 (1%)
Query: 144 SIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDR 203
S+++ + L+ AG+ I VW+L++ K + TL G + +I + G+ +AS S D
Sbjct: 68 SVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGLKANICSLDFHPYGEFVASGSQDT 127
Query: 204 SIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIF 263
+I +WD+ + R GH+ + L+F D L S ++D T ++W+ ++ + F
Sbjct: 128 NIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSE--F 185
Query: 264 ESHLTKNVWGVDVEETNLIAISGGNDGRLKVTEL 297
H T V V+ + SG +DG ++ +L
Sbjct: 186 PGH-TGPVNVVEFHPNEYLLASGSSDGTIRFWDL 218
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 63.2 bits (152), Expect = 2e-09
Identities = 39/133 (29%), Positives = 69/133 (51%), Gaps = 4/133 (3%)
Query: 163 IIVWELD-SKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWG 221
+ +WE SK+ L GH+ + +V S +GK +AS S D+S+ +W+ ++G+ ++ G
Sbjct: 341 MFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRG 400
Query: 222 HTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNL 281
H ++ + + D L+S S+D T ++W + +L K H V+ VD
Sbjct: 401 HVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKL--KQDLPGH-ADEVFAVDWSPDGE 457
Query: 282 IAISGGNDGRLKV 294
+SGG D LK+
Sbjct: 458 KVVSGGKDRVLKL 470
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 63.2 bits (152), Expect = 2e-09
Identities = 32/99 (32%), Positives = 53/99 (53%)
Query: 153 LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVS 212
L+ +G+ + VWEL + K + TL+GH +F + L+ S S D S+ IWD+ +
Sbjct: 128 LLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVRT 187
Query: 213 GKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWN 251
GK L H+ + + F D + ++S S D CR+W+
Sbjct: 188 GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 226
Score = 52.0 bits (123), Expect = 5e-06
Identities = 27/91 (29%), Positives = 49/91 (53%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
I +W K T+ GH+ I V S++ +LL S SDD+++ +W++ +GK L GH
Sbjct: 96 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGH 155
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYK 253
+ ++ F ++S S D + R+W+ +
Sbjct: 156 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
Score = 51.2 bits (121), Expect = 8e-06
Identities = 29/75 (38%), Positives = 40/75 (52%)
Query: 176 TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDD 235
TL GH ++ V S NG+ LAS S D+ I IW GK GH I ++ + +D
Sbjct: 67 TLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 126
Query: 236 TQLISVSEDCTCRVW 250
L+S S+D T +VW
Sbjct: 127 RLLVSGSDDKTLKVW 141
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 62.8 bits (151), Expect = 3e-09
Identities = 28/102 (27%), Positives = 60/102 (58%)
Query: 153 LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVS 212
LV G++ +W++ + ++++TLRGH I ++ + +G + + S D ++++WD +
Sbjct: 108 LVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVVWDADT 167
Query: 213 GKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKN 254
G+ ++ GH A I + F D + +++ S D TC++W+ N
Sbjct: 168 GRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATN 209
Score = 54.7 bits (130), Expect = 7e-07
Identities = 51/244 (20%), Positives = 103/244 (41%), Gaps = 15/244 (6%)
Query: 8 VGPSLAVKFYEKWCLCSQGPFIEVFDYSNGSSINRCHIFHRNKVHGISIDKTSGNVLVYG 67
+GPS Y++ C +++D ++G +N HRN V+ I+ + G+ + G
Sbjct: 20 LGPSFITGSYDRTC--------KLWDTASGEELNTLE-GHRNVVYAIAFNNPYGDKIATG 70
Query: 68 SRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVLIIDPDNFTV 127
S + L+S G SFN + + T D
Sbjct: 71 SFDKTC----KLWSVETGKCYHTFRGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNG 126
Query: 128 KSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYV 187
+ + + G + + S S +++ G+ + ++VW+ D+ +K++ L GH I
Sbjct: 127 EEVYTLRGHSAEIISLSFNTSGDRIIT--GSFDHTVVVWDADTGRKVNILIGHCAEISSA 184
Query: 188 TTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTC 247
+ + + L+ + S D++ +WD +GK ++ GH I + F + + S D T
Sbjct: 185 SFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTA 244
Query: 248 RVWN 251
R+++
Sbjct: 245 RIFS 248
Score = 54.3 bits (129), Expect = 9e-07
Identities = 28/93 (30%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNN-GKLLASCSDDRSIIIWDMVSGKLLSRAWGHT 223
+W+ S ++++TL GH ++ + +N G +A+ S D++ +W + +GK GHT
Sbjct: 35 LWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 94
Query: 224 ARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDE 256
A I L F T + + S D T ++W+ +N E
Sbjct: 95 AEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGE 127
>CE17845 [R] KOG0286 G-protein beta subunit
Length = 356
Score = 62.4 bits (150), Expect = 3e-09
Identities = 52/210 (24%), Positives = 93/210 (43%), Gaps = 11/210 (5%)
Query: 91 MTGEWIMSGEFSFNKEEIYLLTSYNRVLIIDPDNFTVKSTHFVEGERSIL----YSGSIK 146
M W+M+ FS + + I N+ ++ P +F ++ +R + Y
Sbjct: 108 MPTTWVMACAFSPSSQMIACGGLDNKCSVV-PLSF---EDDIIQKKRQVATHTSYMSCCT 163
Query: 147 VLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTS--NNGKLLASCSDDRS 204
LR L+ G+ + +W+++S + I GH G +F + + G S D+
Sbjct: 164 FLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKH 223
Query: 205 IIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFE 264
++WD+ SG+ + GH A I ++F + + S+D TCR+++ + D E
Sbjct: 224 SLVWDIRSGQCVQSFEGHEADINTVRFHPNGDAFATGSDDATCRLFDLRADRQVCVYEKE 283
Query: 265 SHLTKNVWGVDVEETNLIAISGGNDGRLKV 294
S L V GVD + I +G D R+ V
Sbjct: 284 SILFP-VNGVDFSLSGRILFAGYGDYRVGV 312
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 61.6 bits (148), Expect = 6e-09
Identities = 38/122 (31%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 176 TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDD 235
TL GH ++ V S NG+ LAS S DR IIIW GK +GH I ++ + +D
Sbjct: 36 TLVGHTEAVSSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDS 95
Query: 236 TQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLKVT 295
++L+S S+D T ++W+ ++ + + H + V+ + + + ISG D +K+
Sbjct: 96 SRLVSASDDKTLKLWDVRSGKCL--KTLKGH-SNYVFCCNFNPPSNLIISGSFDETVKIW 152
Query: 296 EL 297
E+
Sbjct: 153 EV 154
Score = 57.4 bits (137), Expect = 1e-07
Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 3/132 (2%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
II+W K TL GH I V S++ L S SDD+++ +WD+ SGK L GH
Sbjct: 65 IIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDDKTLKLWDVRSGKCLKTLKGH 124
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLI 282
+ ++ F +IS S D T ++W K + +K + S + V V + +
Sbjct: 125 SNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGK-CLKTL--SAHSDPVSAVHFNCSGSL 181
Query: 283 AISGGNDGRLKV 294
+SG DG ++
Sbjct: 182 IVSGSYDGLCRI 193
Score = 51.6 bits (122), Expect = 6e-06
Identities = 25/87 (28%), Positives = 46/87 (52%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W++ S K + TL+GH +F + L+ S S D ++ IW++ +GK L H+
Sbjct: 109 LWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLSAHSD 168
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWN 251
+ + F + ++S S D CR+W+
Sbjct: 169 PVSAVHFNCSGSLIVSGSYDGLCRIWD 195
>ECU01g1290 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 983
Score = 61.6 bits (148), Expect = 6e-09
Identities = 39/145 (26%), Positives = 74/145 (50%), Gaps = 15/145 (10%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
I VW ++ + L+GH+ + + + S SDD++I++W+M++GKLL+ A GH
Sbjct: 80 IRVWSYSERRVTNRLKGHDDFVRSLDFHPTKPWILSASDDQTIMVWNMLTGKLLATARGH 139
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYKN-----------DELTIKDIFESHLTKNV 271
+ +F +++ ++S S D + RVW+ K ++ IK I + H + +
Sbjct: 140 CHYVMAARFLGEES-IVSGSLDQSIRVWDCKGLKEGSKKNSLLPDIVIKQIVDGH-DRGI 197
Query: 272 WGVDVEETNLIAISGGNDGRLKVTE 296
+ V + +SGG+D +K E
Sbjct: 198 NAIAVR--GEVFVSGGDDRDIKCWE 220
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 61.6 bits (148), Expect = 6e-09
Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 3/102 (2%)
Query: 157 GTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTS---NNGKLLASCSDDRSIIIWDMVSG 213
GT+ N + +W + S K + T GH + + ++++ NGK + S S+D + +W++ S
Sbjct: 216 GTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSK 275
Query: 214 KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND 255
KLL + GHT + N+ + + S S D T R+W K +
Sbjct: 276 KLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWTQKKE 317
Score = 56.6 bits (135), Expect = 2e-07
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 111 LTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVWELDS 170
LTS+NR V S F R + + + K +R + TI + I
Sbjct: 20 LTSHNRA---------VSSVKFSSDGRLLASASADKTIRTYTI---NTINDPIA------ 61
Query: 171 KKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLK 230
+ + GHE I V S++ + + S SDD+++ +WD+ +G L+ GHT + +
Sbjct: 62 -EPVQEFTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVN 120
Query: 231 FFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDG 290
F ++S S D T R+W+ + + +H + V VD + +S DG
Sbjct: 121 FNPQSNMIVSGSFDETVRIWDVTTGKCL--KVLPAH-SDPVTAVDFNRDGSLIVSSSYDG 177
Query: 291 RLKV 294
++
Sbjct: 178 LCRI 181
Score = 55.1 bits (131), Expect = 5e-07
Identities = 26/87 (29%), Positives = 46/87 (51%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W++++ I TL GH F V + ++ S S D ++ IWD+ +GK L H+
Sbjct: 97 LWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPAHSD 156
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWN 251
+ + F D + ++S S D CR+W+
Sbjct: 157 PVTAVDFNRDGSLIVSSSYDGLCRIWD 183
>YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 817
Score = 61.2 bits (147), Expect = 8e-09
Identities = 30/86 (34%), Positives = 41/86 (46%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W LD+ + TL GH ++ + N K L SC D I IWD SG+ L GH
Sbjct: 559 IWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGECLKTLDGHNN 618
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVW 250
R+W L ND ++S D + W
Sbjct: 619 RLWALSTMNDGDMIVSADADGVFQFW 644
Score = 55.1 bits (131), Expect = 5e-07
Identities = 31/126 (24%), Positives = 57/126 (44%), Gaps = 3/126 (2%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W L++ + TL H+ ++ V+ KLLA+ S D+++ IW + + ++ GHT
Sbjct: 517 IWNLENGELEATLANHKRGLWDVSFCQYDKLLATSSGDKTVKIWSLDTFSVMKTLEGHTN 576
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAI 284
+ F N QLIS D ++W+ + E + H +W + + +
Sbjct: 577 AVQRCSFINKQKQLISCGADGLIKIWDCSSGECL--KTLDGH-NNRLWALSTMNDGDMIV 633
Query: 285 SGGNDG 290
S DG
Sbjct: 634 SADADG 639
Score = 51.6 bits (122), Expect = 6e-06
Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 3/120 (2%)
Query: 175 HTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFND 234
+T HE I ++ S N + A+ S D++ IW++ +G+L + H +W++ F
Sbjct: 485 YTRHAHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQY 544
Query: 235 DTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLKV 294
D L + S D T ++W+ D ++ E H T V IS G DG +K+
Sbjct: 545 DKLLATSSGDKTVKIWSL--DTFSVMKTLEGH-TNAVQRCSFINKQKQLISCGADGLIKI 601
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 61.2 bits (147), Expect = 8e-09
Identities = 36/134 (26%), Positives = 66/134 (48%), Gaps = 3/134 (2%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
N + +W + K + + GH+ + V S + KL+AS S D+S+ +W G+ ++
Sbjct: 348 NTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFR 407
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETN 280
GH ++ + + D ++S S+D T +VW+ + +L + H V+GVD
Sbjct: 408 GHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQE--LPGH-ADEVFGVDWAPDG 464
Query: 281 LIAISGGNDGRLKV 294
SGG D +K+
Sbjct: 465 SRVASGGKDKVIKL 478
>At5g49430 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 1583
Score = 60.8 bits (146), Expect = 1e-08
Identities = 38/122 (31%), Positives = 61/122 (49%), Gaps = 5/122 (4%)
Query: 133 VEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNN 192
+ G R+ +Y + R V G+ + VW +D+ + + RGHEG I + S+N
Sbjct: 241 LRGHRNAVYCAILD--RSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAVSSN 298
Query: 193 GKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFF---NDDTQLISVSEDCTCRV 249
+AS S+D I +W + G +S GHT + + F QL+S S+D TCR+
Sbjct: 299 NIFIASASNDCVIRVWRLPDGLPVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRI 358
Query: 250 WN 251
W+
Sbjct: 359 WD 360
Score = 52.8 bits (125), Expect = 3e-06
Identities = 24/79 (30%), Positives = 41/79 (51%)
Query: 172 KKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKF 231
+ I LRGH +++ +G+ + + SDDR + +W M + L+ GH I +L
Sbjct: 236 QNIKRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTAYCLASCRGHEGDITDLAV 295
Query: 232 FNDDTQLISVSEDCTCRVW 250
+++ + S S DC RVW
Sbjct: 296 SSNNIFIASASNDCVIRVW 314
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 60.8 bits (146), Expect = 1e-08
Identities = 32/115 (27%), Positives = 59/115 (50%), Gaps = 3/115 (2%)
Query: 154 VNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSG 213
V G+ + +W+ + + + + GH+GS+ + S G+ LAS S D +IIIWD+ +G
Sbjct: 549 VATGSSDRTVRLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNG 608
Query: 214 KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLT 268
L++ HT+ + + F D T L + D +W++ +D +H+T
Sbjct: 609 SLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWDFHK---VTEDYISNHIT 660
>YDR267c [R] KOG0645 WD40 repeat protein
Length = 330
Score = 60.5 bits (145), Expect = 1e-08
Identities = 52/223 (23%), Positives = 94/223 (41%), Gaps = 21/223 (9%)
Query: 150 HKVLVNAGTIMNGIIVWELDSKKK-------IHTLRGHEGSIFYVTTSNNGKLLASCSDD 202
H L+ AG+ + + +W + + + GHE + V SN+G LA+CS D
Sbjct: 69 HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD 128
Query: 203 RSIIIWDMVSG----KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELT 258
+S+ IW+ + +S H+ + ++ + + L S S D T R+W +D+
Sbjct: 129 KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWE 188
Query: 259 IKDIFESHLTKNVWGVDVEETNLI--AISGGNDGRLKVTELVPHNRSCNIELSLESISEQ 316
+ H VW D ++T + SG +D ++V + + + E E+I
Sbjct: 189 CVAVLNGH-EGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD 247
Query: 317 CDGFIHKANEIVKGFHWFDFGLVLITSEGNILEYLQNIE-EWK 358
+HK V W GL+ +L + ++ EWK
Sbjct: 248 ----VHKRQ--VYNVAWGFNGLIASVGADGVLAVYEEVDGEWK 284
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 60.5 bits (145), Expect = 1e-08
Identities = 30/98 (30%), Positives = 53/98 (53%)
Query: 154 VNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSG 213
V G+ + +W++ + + GH+G I +T S NG+ LA+ + D +++WD+ G
Sbjct: 642 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 701
Query: 214 KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWN 251
++ GHT + +L+F D L S S D T R+W+
Sbjct: 702 LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 739
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 60.5 bits (145), Expect = 1e-08
Identities = 30/98 (30%), Positives = 53/98 (53%)
Query: 154 VNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSG 213
V G+ + +W++ + + GH+G I +T S NG+ LA+ + D +++WD+ G
Sbjct: 587 VATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHG 646
Query: 214 KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWN 251
++ GHT + +L+F D L S S D T R+W+
Sbjct: 647 LMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWD 684
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 60.5 bits (145), Expect = 1e-08
Identities = 28/87 (32%), Positives = 47/87 (53%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W++ S K + TL+GH +F + L+ S S D S+ IWD+ +GK L H+
Sbjct: 113 IWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 172
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWN 251
+ + F D + ++S S D CR+W+
Sbjct: 173 PVSAVHFNRDGSLIVSSSYDGLCRIWD 199
Score = 56.6 bits (135), Expect = 2e-07
Identities = 31/91 (34%), Positives = 48/91 (52%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
I +W K T+ GH+ I V S++ LL S SDD+++ IWD+ SGK L GH
Sbjct: 69 IKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGH 128
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYK 253
+ ++ F ++S S D + R+W+ K
Sbjct: 129 SNYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Score = 52.8 bits (125), Expect = 3e-06
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 176 TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDD 235
TL GH ++ V S NG+ LAS S D+ I IW GK GH I ++ + +D
Sbjct: 40 TLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDS 99
Query: 236 TQLISVSEDCTCRVWN 251
L+S S+D T ++W+
Sbjct: 100 NLLVSASDDKTLKIWD 115
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 60.5 bits (145), Expect = 1e-08
Identities = 42/147 (28%), Positives = 68/147 (45%), Gaps = 3/147 (2%)
Query: 151 KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDM 210
+VLV AG I +W+L+ K + TL GH + V G+ AS S D ++ IWD+
Sbjct: 71 EVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDI 130
Query: 211 VSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKN 270
+ GHT + L+F D ++S ED +VW+ +L + F+SH
Sbjct: 131 RKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTE--FKSH-EGQ 187
Query: 271 VWGVDVEETNLIAISGGNDGRLKVTEL 297
+ +D + +G D +K +L
Sbjct: 188 IQSLDFHPHEFLLATGSADRTVKFWDL 214
Score = 60.1 bits (144), Expect = 2e-08
Identities = 28/102 (27%), Positives = 55/102 (53%)
Query: 156 AGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKL 215
+G++ + +W++ K IHT +GH + + + +G+ + S +D + +WD+ +GKL
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL 177
Query: 216 LSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDEL 257
L+ H +I +L F + L + S D T + W+ + EL
Sbjct: 178 LTEFKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFEL 219
>SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 297
Score = 60.1 bits (144), Expect = 2e-08
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W + S IH GH I + + ASC D+ I +WD+ +GK+ R GH A
Sbjct: 40 LWNVKSGACIHEYAGHGHEILDLDLVYDSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLA 99
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAI 284
+I +++ D + L S S D R+W+ +++ + + + +V +D+ E + +
Sbjct: 100 QINTIRYNEDSSILASGSFDSKVRLWDCRSNSFSPIQVL-ADAKDSVSSIDIAEH--LIV 156
Query: 285 SGGNDGRLKVTEL 297
+G DG L+ ++
Sbjct: 157 TGSTDGTLRTYDI 169
>SPBC3D6.12 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 922
Score = 60.1 bits (144), Expect = 2e-08
Identities = 42/153 (27%), Positives = 73/153 (47%), Gaps = 5/153 (3%)
Query: 144 SIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDR 203
++K+ V A + N + V+ LDS K L GH+ + + S + KLL +CS D+
Sbjct: 539 AVKISPDGRFVAASLLDNTVKVYYLDSLKFFLNLYGHKLPVLSMDISYDSKLLVTCSADK 598
Query: 204 SIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIF 263
++ IW + G + H I + F D + S+D R W+ K+ +L +K
Sbjct: 599 NVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFFTCSKDREVRYWDGKSFDLILK--L 656
Query: 264 ESHLTKNVWGVDVEETNLIAISGGNDGRLKVTE 296
H ++ VW + V T +SG +D +++ E
Sbjct: 657 RGHHSE-VWALAVGPT--FVVSGSHDHSIRLWE 686
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 60.1 bits (144), Expect = 2e-08
Identities = 28/102 (27%), Positives = 54/102 (52%)
Query: 156 AGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKL 215
+G++ + +W++ K IHT +GH + + + +G+ + S +D + +WD+ +GKL
Sbjct: 211 SGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKL 270
Query: 216 LSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDEL 257
L H +I +L F + L + S D T + W+ + EL
Sbjct: 271 LHEFKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFEL 312
Score = 60.1 bits (144), Expect = 2e-08
Identities = 42/145 (28%), Positives = 67/145 (45%), Gaps = 3/145 (2%)
Query: 153 LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVS 212
LV AG I +W+L+ K + TL GH + V G+ AS S D ++ IWD+
Sbjct: 166 LVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRK 225
Query: 213 GKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVW 272
+ GHT + L+F D ++S ED +VW+ +L + F+SH K +
Sbjct: 226 KGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHE--FKSHEGK-IQ 282
Query: 273 GVDVEETNLIAISGGNDGRLKVTEL 297
+D + +G D +K +L
Sbjct: 283 SLDFHPHEFLLATGSADKTVKFWDL 307
>7292737 [A] KOG0285 Pleiotropic regulator 1
Length = 482
Score = 60.1 bits (144), Expect = 2e-08
Identities = 38/151 (25%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
I +W+L S K +L GH ++ V S L SC +DR + WD+ K++ GH
Sbjct: 196 IKIWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGH 255
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLI 282
+ +++L L + D T R+W+ + H T V V + TN
Sbjct: 256 LSAVYSLALHPTIDVLATSGRDSTARIWDMRTKANV--HTLTGH-TNTVASVVAQATNPQ 312
Query: 283 AISGGNDGRLKVTELVPHNRSCNIELSLESI 313
I+G +D +++ +L C + +S+
Sbjct: 313 IITGSHDSTVRLWDLAAGKSVCTLTNHKKSV 343
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 58.9 bits (141), Expect = 4e-08
Identities = 32/105 (30%), Positives = 56/105 (52%), Gaps = 2/105 (1%)
Query: 150 HKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWD 209
H ++ G+ N + VW +D + ++TL GH G ++ S G+ + S S DR++ +W
Sbjct: 263 HDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWS 322
Query: 210 MVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKN 254
V G LL GHT+ + + + L++ S D T RVW+ ++
Sbjct: 323 TVDGSLLHTLQGHTSTVRCMAMAG--SILVTGSRDTTLRVWDVES 365
Score = 52.8 bits (125), Expect = 3e-06
Identities = 37/152 (24%), Positives = 73/152 (47%), Gaps = 10/152 (6%)
Query: 111 LTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIM------NGII 164
++ R ++ + TVK V+G G +R + AG+I+ +
Sbjct: 302 ISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLR 359
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
VW+++S + + TL GH ++ V +G + S D ++ IW+ +G+ + GH
Sbjct: 360 VWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNN 417
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDE 256
R+++L F ++ + + S S D + RVW++ E
Sbjct: 418 RVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 449
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 58.9 bits (141), Expect = 4e-08
Identities = 32/105 (30%), Positives = 56/105 (52%), Gaps = 2/105 (1%)
Query: 150 HKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWD 209
H ++ G+ N + VW +D + ++TL GH G ++ S G+ + S S DR++ +W
Sbjct: 265 HDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTVKVWS 324
Query: 210 MVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKN 254
V G LL GHT+ + + + L++ S D T RVW+ ++
Sbjct: 325 TVDGSLLHTLQGHTSTVRCMAMAG--SILVTGSRDTTLRVWDVES 367
Score = 52.8 bits (125), Expect = 3e-06
Identities = 37/152 (24%), Positives = 73/152 (47%), Gaps = 10/152 (6%)
Query: 111 LTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIM------NGII 164
++ R ++ + TVK V+G G +R + AG+I+ +
Sbjct: 304 ISQCGRYIVSGSTDRTVKVWSTVDGSLLHTLQGHTSTVR--CMAMAGSILVTGSRDTTLR 361
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
VW+++S + + TL GH ++ V +G + S D ++ IW+ +G+ + GH
Sbjct: 362 VWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRTLTGHNN 419
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDE 256
R+++L F ++ + + S S D + RVW++ E
Sbjct: 420 RVYSLLFESERSIVCSGSLDTSIRVWDFTRPE 451
>7290895 [R] KOG0286 G-protein beta subunit
Length = 358
Score = 58.9 bits (141), Expect = 4e-08
Identities = 34/142 (23%), Positives = 68/142 (46%), Gaps = 3/142 (2%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNN--GKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
+W+++S + + + GH G + + + N G S S DR IWDM SG ++ GH
Sbjct: 184 LWDVESGQLLQSFHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGH 243
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLI 282
+ + ++KF + + S+D +CR+++ + D + + + V VD + +
Sbjct: 244 QSDVNSVKFHPCGDAIATGSDDSSCRLYDMRADR-EVAVFAKESIIFGVNSVDFSVSGRL 302
Query: 283 AISGGNDGRLKVTELVPHNRSC 304
+G ND + + + + R C
Sbjct: 303 LFAGYNDYTVNLWDTLKSERVC 324
>YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 58.5 bits (140), Expect = 5e-08
Identities = 46/159 (28%), Positives = 77/159 (47%), Gaps = 11/159 (6%)
Query: 161 NGII-VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRA 219
+G+I VW+L SK + GH+ +I + G L S S D +II+WD+V L +
Sbjct: 100 DGVIKVWDLMSKTVLLNFNGHKAAITLLQFDGTGTRLISGSKDSNIIVWDLVGEVGLYKL 159
Query: 220 WGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHL--TKNVWGVDVE 277
H I +D LIS S+D ++W+ K + E+H+ T WG+ V+
Sbjct: 160 RSHKDSITGFWCQGED-WLISTSKDGMIKLWDLKTHQ-----CIETHIAHTGECWGLAVK 213
Query: 278 ETNLIAISGGNDGRLKVTELVPHNRSCNIELSLESISEQ 316
+ + I+ G D ++K+ +L N +L+ I E+
Sbjct: 214 DD--LLITTGTDSQVKIWKLDIENDKMGGKLTEMGIFEK 250
Score = 53.1 bits (126), Expect = 2e-06
Identities = 35/136 (25%), Positives = 63/136 (45%), Gaps = 3/136 (2%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
N + V+ LDS K +L GH+ + + S + K++ + S D++I IW + G +
Sbjct: 553 NTVKVFFLDSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLF 612
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETN 280
H I N+KF S S+D + W+ + E K +H ++ VW + V
Sbjct: 613 AHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQK--LYAHQSE-VWALAVATDG 669
Query: 281 LIAISGGNDGRLKVTE 296
+S +D +++ E
Sbjct: 670 GFVVSSSHDHSIRIWE 685
Score = 52.8 bits (125), Expect = 3e-06
Identities = 34/138 (24%), Positives = 61/138 (43%), Gaps = 6/138 (4%)
Query: 151 KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDM 210
K+++ + N I +W LD +L H+ SI V SCS D + WD
Sbjct: 586 KMIITSSADKN-IKIWGLDFGDCHKSLFAHQDSIMNVKFLPQSHNFFSCSKDAVVKYWDG 644
Query: 211 VSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKN 270
+ + + + H + +W L D ++S S D + R+W D++ +++ E L +
Sbjct: 645 EKFECIQKLYAHQSEVWALAVATDGGFVVSSSHDHSIRIWEETEDQVFLEEEKEKELEE- 703
Query: 271 VWGVDVEETNLIAISGGN 288
E+T L ++ GN
Sbjct: 704 ----QYEDTLLTSLEEGN 717
>YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 640
Score = 58.5 bits (140), Expect = 5e-08
Identities = 45/132 (34%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 173 KIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFF 232
+I +GH + +T N +LL + S D +I IWD+ +GKL+ R GH+ + L F
Sbjct: 294 RIQEFKGHMDGV--LTLQFNYRLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYF- 350
Query: 233 NDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRL 292
DD +LI+ S D T RVWNY E + H + +V VD + + +SG D +
Sbjct: 351 -DDRKLITGSLDKTIRVWNYITGECI--STYRGH-SDSVLSVDSYQK--VIVSGSADKTV 404
Query: 293 KVTELVPHNRSC 304
KV + +R+C
Sbjct: 405 KVWHV--ESRTC 414
>Hs5174447 [T] KOG0279 G protein beta subunit-like protein
Length = 317
Score = 58.5 bits (140), Expect = 5e-08
Identities = 42/141 (29%), Positives = 70/141 (48%), Gaps = 7/141 (4%)
Query: 163 IIVWELDSKKKIH-----TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLS 217
II+W+L + + LRGH + V S++G+ S S D ++ +WD+ +G
Sbjct: 40 IIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTR 99
Query: 218 RAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKN-DELTIKDIFESHLTKNVWGVDV 276
R GHT + ++ F +D+ Q++S S D T ++WN + T++D S V
Sbjct: 100 RFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCV-RFSP 158
Query: 277 EETNLIAISGGNDGRLKVTEL 297
+N I +S G D +KV L
Sbjct: 159 NSSNPIIVSCGWDKLVKVWNL 179
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 58.5 bits (140), Expect = 5e-08
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 176 TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDD 235
TL+GH G++ + + +G +L S S D+++ +WD +G+ + R GHT+ + +
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKS 163
Query: 236 TQLISV-SEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLKV 294
QL+ S+D T ++W+ + F++ T V V +T+ ISGG D +KV
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAI--QTFQN--TYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 295 TEL 297
+L
Sbjct: 220 WDL 222
>YFL009w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 779
Score = 58.2 bits (139), Expect = 6e-08
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 130 THFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSKKKI-------------HT 176
TH +G S + I ++ + G+ N + VW+L + + HT
Sbjct: 456 THVFKGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHT 515
Query: 177 ----------LRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARI 226
LRGH S+ T S +G ++ S S D ++I+WD+ K L GHT RI
Sbjct: 516 PEENPYFVGVLRGHMASVR--TVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRI 573
Query: 227 WNLKFFNDDTQLISVSEDCTCRVWNYKN 254
++ + ++ + IS S D T R+W+ +N
Sbjct: 574 YSTIYDHERKRCISASMDTTIRIWDLEN 601
>Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 808
Score = 58.2 bits (139), Expect = 6e-08
Identities = 38/149 (25%), Positives = 69/149 (45%), Gaps = 3/149 (2%)
Query: 144 SIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDR 203
S+ + + L+ G+ +W L + + GH ++ V S ++LA+ S D
Sbjct: 484 SVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADG 543
Query: 204 SIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIF 263
+I +W + L GH A + + F + TQL+S D ++W KN+E
Sbjct: 544 TIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECV--RTL 601
Query: 264 ESHLTKNVWGVDVEETNLIAISGGNDGRL 292
++H K VWG+ + A++G +D R+
Sbjct: 602 DAHEDK-VWGLHCSRLDDHALTGASDSRV 629
>Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 677
Score = 58.2 bits (139), Expect = 6e-08
Identities = 55/262 (20%), Positives = 108/262 (40%), Gaps = 18/262 (6%)
Query: 46 FHRNKVHGISIDKTSGNVLVYGSRSF-SIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFN 104
++RN V+ + +D + G S I ++N + E T +W+ N
Sbjct: 28 YNRNGVNALQLDPALNRLFTAGRDSIIRIWSVNQHKQDPYIASMEHHT-DWVNDIVLCCN 86
Query: 105 KEEIYLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNGII 164
+ + +S V + + ST + Y ++ + K LV + + I
Sbjct: 87 GKTLISASSDTTVKVWNAHKGFCMSTLRTHKD----YVKALAYAKDKELVASAGLDRQIF 142
Query: 165 VWELDSKKKI---------HTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKL 215
+W++++ + +L G++ SI+ + + G ++ S S ++ + +WD +
Sbjct: 143 LWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAK 202
Query: 216 LSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVD 275
L + GHT + L D TQ +S S D T R+W+ + H + VW +
Sbjct: 203 LMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRCIA--TYRVH-DEGVWALQ 259
Query: 276 VEETNLIAISGGNDGRLKVTEL 297
V + SGG D ++ T+L
Sbjct: 260 VNDAFTHVYSGGRDRKIYCTDL 281
>Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 508
Score = 58.2 bits (139), Expect = 6e-08
Identities = 44/163 (26%), Positives = 87/163 (52%), Gaps = 17/163 (10%)
Query: 141 YSGSIKVLRH--KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLAS 198
++GS+ L++ +V+V G+ + + VW++++ + ++TL H ++ ++ SN L+ +
Sbjct: 245 HTGSVLCLQYDERVIVT-GSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVT 301
Query: 199 CSDDRSIIIWDMVSG---KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND 255
CS DRSI +WDM S L GH A + + F DD ++S S D T +VW+
Sbjct: 302 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTC 359
Query: 256 ELTIKDIFESHLTKNVWGVD-VEETNLIAISGGNDGRLKVTEL 297
E F L + G+ ++ + + +SG +D +++ ++
Sbjct: 360 E------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 396
Score = 51.2 bits (121), Expect = 8e-06
Identities = 33/135 (24%), Positives = 73/135 (53%), Gaps = 8/135 (5%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
N I +W+ S + + L GH GS+ + + +++ + S D ++ +WD+ +G++L+
Sbjct: 226 NSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLI 283
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKN-DELTIKDIFESHLTKNVWGVDVEET 279
H + +L+F N +++ S+D + VW+ + ++T++ + H V VD ++
Sbjct: 284 HHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAA-VNVVDFDDK 340
Query: 280 NLIAISGGNDGRLKV 294
+++ SG D +KV
Sbjct: 341 YIVSASG--DRTIKV 353
>Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 529
Score = 58.2 bits (139), Expect = 6e-08
Identities = 44/163 (26%), Positives = 87/163 (52%), Gaps = 17/163 (10%)
Query: 141 YSGSIKVLRH--KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLAS 198
++GS+ L++ +V+V G+ + + VW++++ + ++TL H ++ ++ SN L+ +
Sbjct: 266 HTGSVLCLQYDERVIVT-GSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVT 322
Query: 199 CSDDRSIIIWDMVSG---KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND 255
CS DRSI +WDM S L GH A + + F DD ++S S D T +VW+
Sbjct: 323 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTC 380
Query: 256 ELTIKDIFESHLTKNVWGVD-VEETNLIAISGGNDGRLKVTEL 297
E F L + G+ ++ + + +SG +D +++ ++
Sbjct: 381 E------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 417
Score = 51.2 bits (121), Expect = 8e-06
Identities = 33/135 (24%), Positives = 73/135 (53%), Gaps = 8/135 (5%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
N I +W+ S + + L GH GS+ + + +++ + S D ++ +WD+ +G++L+
Sbjct: 247 NSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLI 304
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKN-DELTIKDIFESHLTKNVWGVDVEET 279
H + +L+F N +++ S+D + VW+ + ++T++ + H V VD ++
Sbjct: 305 HHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAA-VNVVDFDDK 361
Query: 280 NLIAISGGNDGRLKV 294
+++ SG D +KV
Sbjct: 362 YIVSASG--DRTIKV 374
>Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 542
Score = 58.2 bits (139), Expect = 6e-08
Identities = 44/163 (26%), Positives = 87/163 (52%), Gaps = 17/163 (10%)
Query: 141 YSGSIKVLRH--KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLAS 198
++GS+ L++ +V+V G+ + + VW++++ + ++TL H ++ ++ SN L+ +
Sbjct: 279 HTGSVLCLQYDERVIVT-GSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNG--LMVT 335
Query: 199 CSDDRSIIIWDMVSG---KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND 255
CS DRSI +WDM S L GH A + + F DD ++S S D T +VW+
Sbjct: 336 CSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWSTSTC 393
Query: 256 ELTIKDIFESHLTKNVWGVD-VEETNLIAISGGNDGRLKVTEL 297
E F L + G+ ++ + + +SG +D +++ ++
Sbjct: 394 E------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 430
Score = 51.2 bits (121), Expect = 8e-06
Identities = 33/135 (24%), Positives = 73/135 (53%), Gaps = 8/135 (5%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
N I +W+ S + + L GH GS+ + + +++ + S D ++ +WD+ +G++L+
Sbjct: 260 NSIKIWDKTSLECLKVLTGHTGSV--LCLQYDERVIVTGSSDSTVRVWDVNTGEVLNTLI 317
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKN-DELTIKDIFESHLTKNVWGVDVEET 279
H + +L+F N +++ S+D + VW+ + ++T++ + H V VD ++
Sbjct: 318 HHNEAVLHLRFSNG--LMVTCSKDRSIAVWDMASATDITLRRVLVGHRAA-VNVVDFDDK 374
Query: 280 NLIAISGGNDGRLKV 294
+++ SG D +KV
Sbjct: 375 YIVSASG--DRTIKV 387
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 58.2 bits (139), Expect = 6e-08
Identities = 88/319 (27%), Positives = 130/319 (40%), Gaps = 41/319 (12%)
Query: 3 QKLN-HVGPSLAVKFYEKWCL---CSQGPFIEVFDYSNGSSINRCHIFHRNKVHGISIDK 58
QKL H P V F+ W + CS+ I+V+DY G + R H + V+ I+ID
Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQ-LERTLKGHTDAVNDIAID- 157
Query: 59 TSGNVLVYGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVL 118
+G LV S SI + D + L K + S F L + + VL
Sbjct: 158 AAGKQLVSCSSDLSI-KLWDFGQTYDCLKSLKGHEHTVSSVTF---------LPTGDFVL 207
Query: 119 IIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNG------IIVWELDSKK 172
D+ T+K G + G +R + N GT+ + VW +K
Sbjct: 208 SASRDH-TIKQWDISTGYCVYTFRGHNDWVRMIRISNDGTLFASASLDQTVTVWSFATKS 266
Query: 173 KIHTLRGHEGSIFYVTTS---------------NNGKLLASCSDDRSIIIWDMVSGKLLS 217
LR HE ++ V + N+ +L S S DRSI W++ +G +L
Sbjct: 267 AKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNINTGDVLF 326
Query: 218 RAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVE 277
H + L F LISV++D T RVW + + +K I E+H V V
Sbjct: 327 TLLAHENWVRGLAFHPKGKYLISVADDKTLRVWEL-SAQRCMKAI-EAH-EHFVSTVAFH 383
Query: 278 ETNLIAISGGNDGRLKVTE 296
+T+ I+G D KV E
Sbjct: 384 QTSPFVITGSVDMSCKVWE 402
>YKL021c [S] KOG0294 WD40 repeat-containing protein
Length = 468
Score = 57.8 bits (138), Expect = 8e-08
Identities = 43/146 (29%), Positives = 72/146 (48%), Gaps = 18/146 (12%)
Query: 123 DNFTVKSTHFVEGERSILYSGSIKVLR--HKVLVNAGTIMNGIIVWELDSKKKIHTLRGH 180
+N K+ HF+ +S SIK L + LV+ G+ I +++L +K++ TL H
Sbjct: 87 ENDAAKTPHFMPIFHFQAHSLSIKCLAVSRRYLVS-GSNDEHIRIYDLQKRKELGTLLSH 145
Query: 181 EGSIFYVTTSN---------------NGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTAR 225
+GSI + S+ N K L S S+D I++W + + + GHTAR
Sbjct: 146 QGSITALQFSHPASSSEDAAVSKGSKNSKWLLSASEDHKIMVWRVKDWETVGTLKGHTAR 205
Query: 226 IWNLKFFNDDTQLISVSEDCTCRVWN 251
+ ++ + ISVS+D + R+WN
Sbjct: 206 VNDVDIHPTNRIAISVSDDHSIRLWN 231
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 57.8 bits (138), Expect = 8e-08
Identities = 27/95 (28%), Positives = 45/95 (46%), Gaps = 5/95 (5%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W++ + GH + V + +G +AS + I +WD+ +G+ + GH
Sbjct: 489 LWDVHRGHSVRVFNGHTQPVTAVAIAPDGHTMASADSEGLIHLWDIGTGRRIKTMRGHRG 548
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVW-----NYKN 254
I++L F + T L+S DCT R W NY N
Sbjct: 549 NIYSLSFSRESTVLVSGGSDCTVRAWDVFKTNYNN 583
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 57.8 bits (138), Expect = 8e-08
Identities = 50/187 (26%), Positives = 82/187 (43%), Gaps = 28/187 (14%)
Query: 65 VYGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVLIIDPD- 123
++ S ++N + L+ + LD G +++S +FN I D D
Sbjct: 169 IFDSNGRPLLNWSYLYKEHAHLDSNWRHGRFLVS---TFNNPSIRFPA--------DQDF 217
Query: 124 NFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGS 183
T+ S + V+ + I+ SGS + VW+++S+ ++ L GH GS
Sbjct: 218 RATLDSVYCVQYDDEIMVSGSKD--------------RTVSVWDVNSRFILYKLYGHSGS 263
Query: 184 IFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSE 243
+ + LL S S D +IIIWD + + L +GHT + L + +IS S
Sbjct: 264 VLCLDFCRRRNLLVSGSSDSTIIIWDWQNRRPLKVYFGHTDNV--LGVVVSENYIISSSR 321
Query: 244 DCTCRVW 250
D T RVW
Sbjct: 322 DHTARVW 328
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 57.8 bits (138), Expect = 8e-08
Identities = 27/88 (30%), Positives = 48/88 (53%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
I VW+ ++ TL+GH S+ ++ ++GKLLASCS D +I +WD + + GH
Sbjct: 132 IKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGH 191
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVW 250
+ ++ + ++S S D T ++W
Sbjct: 192 DHNVSSVAIMPNGDHIVSASRDKTIKMW 219
Score = 51.2 bits (121), Expect = 8e-06
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 151 KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDM 210
K+L + M I +W+ + I T+ GH+ ++ V NG + S S D++I +W++
Sbjct: 163 KLLASCSADMT-IKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWEV 221
Query: 211 VSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVW 250
+G + GH + ++ D T + S S D T RVW
Sbjct: 222 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVW 261
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 57.8 bits (138), Expect = 8e-08
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 5/123 (4%)
Query: 176 TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDD 235
TL+GH G++ + + +G +L S S D+++ +WD +G+ + R GHT+ + +
Sbjct: 104 TLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRG 163
Query: 236 TQLISV-SEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLKV 294
QL+ S+D T ++W+ + F++ T V V +T+ ISGG D +KV
Sbjct: 164 PQLVCTGSDDGTVKLWDIRKKAAI--QTFQN--TYQVLAVTFNDTSDQIISGGIDNDIKV 219
Query: 295 TEL 297
+L
Sbjct: 220 WDL 222
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 57.4 bits (137), Expect = 1e-07
Identities = 41/152 (26%), Positives = 76/152 (49%), Gaps = 8/152 (5%)
Query: 156 AGTIMNGIIVWEL-DSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGK 214
+G + I++W + K L G +G+I + S + +++ S D ++ WD VSG+
Sbjct: 67 SGGMDRQILLWNVFGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTHLMSWDAVSGQ 126
Query: 215 LLSRAWGHTARIWNLKFFNDDTQLI-SVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWG 273
+ + GH + L ++L+ SVS+DCT +VW+ ++ + IK I E + +
Sbjct: 127 KIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKD-CIKTIEEKY---PLTA 182
Query: 274 VDVEETNLIAISGGNDGRLKVTELVPHNRSCN 305
V + + GG DG +K+ +L N C+
Sbjct: 183 VAIAQQGTQVFIGGIDGAIKIWDL--RNNHCS 212
>SPAC4D7.05 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 57.4 bits (137), Expect = 1e-07
Identities = 31/109 (28%), Positives = 57/109 (51%), Gaps = 2/109 (1%)
Query: 177 LRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDT 236
L+GHE + + +++G LL SC+ D+ I +W +G+ L GHT IW T
Sbjct: 6 LQGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSST 65
Query: 237 QLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAIS 285
++S + D T R+W+ K + K F + + + + D +T ++A++
Sbjct: 66 LMVSGAADNTMRLWDVKTGKQLYKWEFPTAVKRVEFNED--DTRILAVT 112
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 57.4 bits (137), Expect = 1e-07
Identities = 30/94 (31%), Positives = 50/94 (52%), Gaps = 5/94 (5%)
Query: 163 IIVWELDSKKKIH-----TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLS 217
II+W+L K + L GH + V S++G+ S S D + +WD+ +G+
Sbjct: 40 IILWKLTKDDKSYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTR 99
Query: 218 RAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWN 251
R GHT + ++ F D+ Q++S S D T ++WN
Sbjct: 100 RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 57.0 bits (136), Expect = 1e-07
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 93 GEWIMSGEFSFNKEEIYLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKV 152
G ++SG + F V + DP+ T H ++G + +YS +
Sbjct: 511 GRRVVSGAYDF------------MVKVWDPETETC--LHTLQGHTNRVYSLQFDGIH--- 553
Query: 153 LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVS 212
V +G++ I VW++++ IHTL GH+ + +N +L S + D ++ IWD+ +
Sbjct: 554 -VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKT 610
Query: 213 GKLLSRAWG---HTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDEL--TIKDIFESHL 267
G+ L G H + + L+F + +I+ S+D T ++W+ K E + +
Sbjct: 611 GQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 668
Query: 268 TKNVWGVDVEETNLIAISGGNDGRLKVTELV 298
VW + T L+ G +G + LV
Sbjct: 669 GGVVWRIRASNTKLVCAVGSRNGTEETKLLV 699
Score = 53.1 bits (126), Expect = 2e-06
Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 150 HKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWD 209
H+ V +G+ + VW++++ + +H L GH ++ V +G+ + S + D + +WD
Sbjct: 470 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWD 527
Query: 210 MVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTK 269
+ L GHT R+++L+F D ++S S D + RVW+ + LT
Sbjct: 528 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 585
Query: 270 NVWGVDVEETNLIAISGGNDGRLKVTEL 297
G+++++ I +SG D +K+ ++
Sbjct: 586 ---GMELKDN--ILVSGNADSTVKIWDI 608
Score = 52.8 bits (125), Expect = 3e-06
Identities = 38/132 (28%), Positives = 61/132 (45%), Gaps = 8/132 (6%)
Query: 166 WELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTAR 225
W K L+GH+ + G + S SDD ++ +W V+GK L GHT
Sbjct: 365 WRRGELKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 423
Query: 226 IWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAIS 285
+W+ + D +IS S D T +VWN + E I ++ T V + + E + +S
Sbjct: 424 VWSSQM--RDNIIISGSTDRTLKVWNAETGE-CIHTLYGH--TSTVRCMHLHEKRV--VS 476
Query: 286 GGNDGRLKVTEL 297
G D L+V ++
Sbjct: 477 GSRDATLRVWDI 488
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 57.0 bits (136), Expect = 1e-07
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 27/211 (12%)
Query: 93 GEWIMSGEFSFNKEEIYLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKV 152
G ++SG + F V + DP+ T H ++G + +YS +
Sbjct: 431 GRRVVSGAYDF------------MVKVWDPETETC--LHTLQGHTNRVYSLQFDGIH--- 473
Query: 153 LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVS 212
V +G++ I VW++++ IHTL GH+ + +N +L S + D ++ IWD+ +
Sbjct: 474 -VVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN--ILVSGNADSTVKIWDIKT 530
Query: 213 GKLLSRAWG---HTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDEL--TIKDIFESHL 267
G+ L G H + + L+F + +I+ S+D T ++W+ K E + +
Sbjct: 531 GQCLQTLQGPNKHQSAVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 588
Query: 268 TKNVWGVDVEETNLIAISGGNDGRLKVTELV 298
VW + T L+ G +G + LV
Sbjct: 589 GGVVWRIRASNTKLVCAVGSRNGTEETKLLV 619
Score = 53.1 bits (126), Expect = 2e-06
Identities = 37/148 (25%), Positives = 75/148 (50%), Gaps = 9/148 (6%)
Query: 150 HKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWD 209
H+ V +G+ + VW++++ + +H L GH ++ V +G+ + S + D + +WD
Sbjct: 390 HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCV--QYDGRRVVSGAYDFMVKVWD 447
Query: 210 MVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTK 269
+ L GHT R+++L+F D ++S S D + RVW+ + LT
Sbjct: 448 PETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTS 505
Query: 270 NVWGVDVEETNLIAISGGNDGRLKVTEL 297
G+++++ I +SG D +K+ ++
Sbjct: 506 ---GMELKDN--ILVSGNADSTVKIWDI 528
Score = 52.8 bits (125), Expect = 3e-06
Identities = 38/132 (28%), Positives = 61/132 (45%), Gaps = 8/132 (6%)
Query: 166 WELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTAR 225
W K L+GH+ + G + S SDD ++ +W V+GK L GHT
Sbjct: 285 WRRGELKSPKVLKGHDDHVI-TCLQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGG 343
Query: 226 IWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAIS 285
+W+ + D +IS S D T +VWN + E I ++ T V + + E + +S
Sbjct: 344 VWSSQM--RDNIIISGSTDRTLKVWNAETGE-CIHTLYGH--TSTVRCMHLHEKRV--VS 396
Query: 286 GGNDGRLKVTEL 297
G D L+V ++
Sbjct: 397 GSRDATLRVWDI 408
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 57.0 bits (136), Expect = 1e-07
Identities = 29/94 (30%), Positives = 51/94 (53%), Gaps = 5/94 (5%)
Query: 163 IIVWELDSKKKIH-----TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLS 217
II+W+L + K + + GH + V S++G+ S S D + +WD+ +G+
Sbjct: 40 IILWKLTKEDKSYGVAQRRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTR 99
Query: 218 RAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWN 251
R GHT + ++ F D+ Q++S S D T ++WN
Sbjct: 100 RFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWN 133
>At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 900
Score = 57.0 bits (136), Expect = 1e-07
Identities = 29/91 (31%), Positives = 50/91 (54%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
++VW+ ++ I +GH + VT S + +LLA+ +DD + +W+++SG H
Sbjct: 371 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEH 430
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYK 253
T + L F D+ L+S S D T R W++K
Sbjct: 431 TNAVTALHFMADNHSLLSASLDGTVRAWDFK 461
>7290824 [DK] KOG0973 Histone transcription regulator HIRA WD repeat
superfamily
Length = 1047
Score = 57.0 bits (136), Expect = 1e-07
Identities = 38/115 (33%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 169 DSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWD-MVSGKLLSRAWGHTARIW 227
+S K +TLRGH+G + + S N LASCS D ++IIWD ++ GHT +
Sbjct: 117 ESWKCFYTLRGHDGDVLDLAWSPNDVYLASCSIDNTVIIWDAQAFPHSVATLKGHTGLVK 176
Query: 228 NLKFFNDDTQLISVSEDCTCRVWNYKNDEL--TIKDIFE-----SHLTKNVWGVD 275
+ + L S S+D + ++WN N L TI + FE +H+ + W D
Sbjct: 177 GVSWDPLGRFLASQSDDRSIKIWNTMNWSLSHTITEPFEECGGTTHILRLSWSPD 231
>Hs4759276 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 475
Score = 56.6 bits (135), Expect = 2e-07
Identities = 39/146 (26%), Positives = 65/146 (43%), Gaps = 14/146 (9%)
Query: 163 IIVWELDSKKKIHTLR-----------GHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMV 211
II W ++S +K+H + GH + + S++GK LAS + I+IW+
Sbjct: 170 IIKWSVESGRKLHVIPRAKKGAEGKPPGHSSHVLCMAISSDGKYLASGDRSKLILIWEAQ 229
Query: 212 SGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNV 271
S + L GH + L F QL S S D + +VWN + ++ +F V
Sbjct: 230 SCQHLYTFTGHRDAVSGLAFRRGTHQLYSTSHDRSVKVWNVAENSY-VETLFGHQ--DAV 286
Query: 272 WGVDVEETNLIAISGGNDGRLKVTEL 297
+D +GG DG ++V ++
Sbjct: 287 AALDALSRECCVTAGGRDGTVRVWKI 312
>Hs4505895 [A] KOG0285 Pleiotropic regulator 1
Length = 514
Score = 56.6 bits (135), Expect = 2e-07
Identities = 36/142 (25%), Positives = 67/142 (46%), Gaps = 3/142 (2%)
Query: 157 GTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLL 216
G+ I +W+L S K +L GH ++ V S L SC +D+ + WD+ K++
Sbjct: 222 GSADRTIKIWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVI 281
Query: 217 SRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDV 276
GH + ++ L L++ S D T R+W+ + + ++ + S T V V
Sbjct: 282 RHYHGHLSAVYGLDLHPTIDVLVTCSRDSTARIWDVRT-KASVHTL--SGHTNAVATVRC 338
Query: 277 EETNLIAISGGNDGRLKVTELV 298
+ I+G +D +++ +LV
Sbjct: 339 QAAEPQIITGSHDTTIRLWDLV 360
>At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 522
Score = 56.6 bits (135), Expect = 2e-07
Identities = 31/108 (28%), Positives = 56/108 (51%)
Query: 149 RHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIW 208
R ++ +G+ I +W + + I H + ++ S +G L S S D++ I
Sbjct: 284 RDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQLLSTSFDQTARIH 343
Query: 209 DMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDE 256
+ SGKLL GHT+ + + F +D +++I+ S DCT +VW+ K +
Sbjct: 344 GLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTTD 391
>7297305 [T] KOG0279 G protein beta subunit-like protein
Length = 318
Score = 56.6 bits (135), Expect = 2e-07
Identities = 42/142 (29%), Positives = 70/142 (48%), Gaps = 8/142 (5%)
Query: 163 IIVWELDSKKKIH------TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLL 216
+IVW+L + + L GH I V S++G S S D+++ +WD+ +GK
Sbjct: 40 LIVWKLTRDEDTNYGYPQKRLYGHSHFISDVVLSSDGNYALSGSWDQTLRLWDLAAGKTT 99
Query: 217 SRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND-ELTIKDIFESHLTKNVWGVD 275
R GHT + ++ F D+ Q++S S D T ++WN + + TI++ + V
Sbjct: 100 RRFEGHTKDVLSVAFSADNRQIVSGSRDKTIKLWNTLAECKFTIQEDGHTDWVSCV-RFS 158
Query: 276 VEETNLIAISGGNDGRLKVTEL 297
+N I +S G D +KV L
Sbjct: 159 PNHSNPIIVSCGWDRTVKVWNL 180
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 56.2 bits (134), Expect = 2e-07
Identities = 41/162 (25%), Positives = 86/162 (52%), Gaps = 15/162 (9%)
Query: 141 YSGSIKVLRH-KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASC 199
++GS+ L++ + ++ G+ + + VW++++ + ++TL H ++ ++ +N ++ +C
Sbjct: 306 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTC 363
Query: 200 SDDRSIIIWDMVSG---KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDE 256
S DRSI +WDM S L GH A + + F DD ++S S D T +VWN E
Sbjct: 364 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 421
Query: 257 LTIKDIFESHLTKNVWGVD-VEETNLIAISGGNDGRLKVTEL 297
F L + G+ ++ + + +SG +D +++ ++
Sbjct: 422 ------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 457
Score = 52.0 bits (123), Expect = 5e-06
Identities = 60/260 (23%), Positives = 119/260 (45%), Gaps = 27/260 (10%)
Query: 7 HVGPSLAVKFYEKWCLC-SQGPFIEVFDYSNGSSINRCHIFHRNKVHGISIDKTSGNVLV 65
H G L +++ E+ + S + V+D + G +N I H V + + + ++V
Sbjct: 306 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL-IHHCEAVLHL---RFNNGMMV 361
Query: 66 YGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVLIIDPDNF 125
S+ SI + D+ S +++ + + G F+ + Y++++ I +
Sbjct: 362 TCSKDRSIA-VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTS 418
Query: 126 TVKSTHFVEGERSILYSGSIKVLRHKV-LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSI 184
T + + G + I L+++ LV +G+ N I +W+++ + L GHE +
Sbjct: 419 TCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 473
Query: 185 FYVTTSNNGKLLASCSDDRSIIIWDMVS--------GKLLSRAW-GHTARIWNLKFFNDD 235
+ N K + S + D I +WD+V+ G L R H+ R++ L+F D+
Sbjct: 474 RCIRFDN--KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 529
Query: 236 TQLISVSEDCTCRVWNYKND 255
Q++S S D T +W++ ND
Sbjct: 530 FQIVSSSHDDTILIWDFLND 549
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 56.2 bits (134), Expect = 2e-07
Identities = 41/162 (25%), Positives = 86/162 (52%), Gaps = 15/162 (9%)
Query: 141 YSGSIKVLRH-KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASC 199
++GS+ L++ + ++ G+ + + VW++++ + ++TL H ++ ++ +N ++ +C
Sbjct: 342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG--MMVTC 399
Query: 200 SDDRSIIIWDMVSG---KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDE 256
S DRSI +WDM S L GH A + + F DD ++S S D T +VWN E
Sbjct: 400 SKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCE 457
Query: 257 LTIKDIFESHLTKNVWGVD-VEETNLIAISGGNDGRLKVTEL 297
F L + G+ ++ + + +SG +D +++ ++
Sbjct: 458 ------FVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDI 493
Score = 52.0 bits (123), Expect = 5e-06
Identities = 60/260 (23%), Positives = 119/260 (45%), Gaps = 27/260 (10%)
Query: 7 HVGPSLAVKFYEKWCLC-SQGPFIEVFDYSNGSSINRCHIFHRNKVHGISIDKTSGNVLV 65
H G L +++ E+ + S + V+D + G +N I H V + + + ++V
Sbjct: 342 HTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTL-IHHCEAVLHL---RFNNGMMV 397
Query: 66 YGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVLIIDPDNF 125
S+ SI + D+ S +++ + + G F+ + Y++++ I +
Sbjct: 398 TCSKDRSIA-VWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSASGDRTIKVWNTS 454
Query: 126 TVKSTHFVEGERSILYSGSIKVLRHKV-LVNAGTIMNGIIVWELDSKKKIHTLRGHEGSI 184
T + + G + I L+++ LV +G+ N I +W+++ + L GHE +
Sbjct: 455 TCEFVRTLNGHKR-----GIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELV 509
Query: 185 FYVTTSNNGKLLASCSDDRSIIIWDMVS--------GKLLSRAW-GHTARIWNLKFFNDD 235
+ N K + S + D I +WD+V+ G L R H+ R++ L+F D+
Sbjct: 510 RCIRFDN--KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE 565
Query: 236 TQLISVSEDCTCRVWNYKND 255
Q++S S D T +W++ ND
Sbjct: 566 FQIVSSSHDDTILIWDFLND 585
>At2g47410 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 1389
Score = 56.2 bits (134), Expect = 2e-07
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 4/126 (3%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W +++ + + RGHEG I + S+N L+AS S+D I +W + G +S GHT
Sbjct: 262 IWSMETALCLASCRGHEGDITDLAVSSNNALVASASNDFVIRVWRLPDGMPISVLRGHTG 321
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAI 284
+ + F + + S+D TCR+W+ + + + S N ++V
Sbjct: 322 AVTAIAF----SPRQASSDDGTCRIWDARYSQWLPRIYVPSPSDANTGSLEVSLLGESTF 377
Query: 285 SGGNDG 290
+ N G
Sbjct: 378 TSSNTG 383
>At1g18080 [T] KOG0279 G protein beta subunit-like protein
Length = 327
Score = 56.2 bits (134), Expect = 2e-07
Identities = 34/110 (30%), Positives = 56/110 (50%), Gaps = 6/110 (5%)
Query: 163 IIVWELDSKKKIH-----TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLS 217
II+W+L K + L GH + V S++G+ S S D + +WD+ +G
Sbjct: 40 IILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR 99
Query: 218 RAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND-ELTIKDIFESH 266
R GHT + ++ F D+ Q++S S D T ++WN + + TI + E H
Sbjct: 100 RFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGH 149
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 55.8 bits (133), Expect = 3e-07
Identities = 54/209 (25%), Positives = 90/209 (42%), Gaps = 30/209 (14%)
Query: 103 FNKEEIYLLTSYNRVLIIDPDNFTVKSTHFV----------EGE---RSILYSGSIKVLR 149
F+ + +L T NR ++ F V++ + EG+ RS+ +S K L
Sbjct: 295 FSADGKFLATGCNRAAMV----FNVETGKLITLLQEESSKREGDLYVRSVAFSPDGKYLA 350
Query: 150 HKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWD 209
G I +W++ K+ L GHE I+ + S +GK L S S DR++ +WD
Sbjct: 351 ------TGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDRTVCLWD 404
Query: 210 MVSGKLLSRAWGHTARIWNLKFFNDDTQLISV-SEDCTCRVWNYKNDELTIKDIFESHLT 268
+ +G+ + HT F+ D Q I+ S D R+W T+ + H
Sbjct: 405 VEAGE--QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIWTSSG---TLVEQLHGH-E 458
Query: 269 KNVWGVDVEETNLIAISGGNDGRLKVTEL 297
++V+ V +SG D +K+ EL
Sbjct: 459 ESVYSVAFSPDGKYLVSGSLDNTIKLWEL 487
>Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 55.8 bits (133), Expect = 3e-07
Identities = 31/140 (22%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 118 LIIDPDNFTVKSTHFVEGERSILYSG---SIKVLRHKVL---VNAGTIMNGIIVWELDSK 171
L + ++ +++ + GE ++ ++G +I L++ L + +G+ IIVW++ ++
Sbjct: 80 LAVGYEDGSIRIFSLLSGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINE 139
Query: 172 KKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKF 231
++ L+GH+ +I LL + D + WD+ + GH +W L
Sbjct: 140 SGLYRLKGHKDAITQALFLREKNLLVTSGKDTMVKWWDLDTQHCFKTMVGHRTEVWGLVL 199
Query: 232 FNDDTQLISVSEDCTCRVWN 251
+++ +LI+ + D RVW+
Sbjct: 200 LSEEKRLITGASDSELRVWD 219
>CE06574 [R] KOG0266 WD40 repeat-containing protein
Length = 501
Score = 55.8 bits (133), Expect = 3e-07
Identities = 31/100 (31%), Positives = 50/100 (50%)
Query: 154 VNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSG 213
+ G+ I VW + TL H+ I + S+N + +AS SDD ++ I+D++SG
Sbjct: 228 LGTGSADKQIKVWNTVDMTYLQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISG 287
Query: 214 KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYK 253
L GHT ++ F + + S D T RVW++K
Sbjct: 288 ACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFK 327
>SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 703
Score = 55.5 bits (132), Expect = 4e-07
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 12/170 (7%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
N I WE + +HTL GH S+ T S G +L S S D SI IW + +G+ L
Sbjct: 488 NSIDRWE-KNPYFVHTLIGHTDSVR--TISGYGDILVSGSYDSSIRIWRVSTGECLYHLR 544
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETN 280
GH+ RI+++ + + IS S D + RVW+ T K + E H V ++V +
Sbjct: 545 GHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTG--TCKYVLEGH-DAFVTLLNVFQNR 601
Query: 281 LIAISGGNDGRLKVTELVPHNRSCNIELSLESISEQCDGFIHKANEIVKG 330
L ISG D +++ +L + + L S S F+ ++I+ G
Sbjct: 602 L--ISGSADSTIRIWDL----NTGKPLMVLPSNSGYISSFVSDEHKIISG 645
Score = 52.0 bits (123), Expect = 5e-06
Identities = 38/142 (26%), Positives = 67/142 (46%), Gaps = 8/142 (5%)
Query: 156 AGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKL 215
+G+ + I +W + + + ++ LRGH I+ V + S S D+SI +WD+ +G
Sbjct: 522 SGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGTC 581
Query: 216 LSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVD 275
GH A + L F + +LIS S D T R+W+ + + L N +
Sbjct: 582 KYVLEGHDAFVTLLNVFQN--RLISGSADSTIRIWDLNTGKPLMV------LPSNSGYIS 633
Query: 276 VEETNLIAISGGNDGRLKVTEL 297
++ I GNDG +K+ ++
Sbjct: 634 SFVSDEHKIISGNDGSVKLWDV 655
>SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 962
Score = 55.5 bits (132), Expect = 4e-07
Identities = 48/239 (20%), Positives = 100/239 (41%), Gaps = 17/239 (7%)
Query: 78 DLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVLIIDPDNFTVKSTHFVEGER 137
D S+ L + + W+ + + E + +S + V + P +
Sbjct: 64 DYGKASQPLAKIQAHSAWVNDIALTHDSEGVISCSSDSTVKLWKPHVLNASCLSTIGEHT 123
Query: 138 SILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLR---------GHEGSIFYVT 188
+ SI LV +G + IIVW+ + +++ G ++ +
Sbjct: 124 DYVKRVSIPKYSKSPLVASGGLDKRIIVWDYNVGQEVMRFEQLPDCSLVVGPRSGVYSLA 183
Query: 189 TSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCR 248
+NN ++A+ + I +WD VS K ++ GHT + ++ +D +++ S D T +
Sbjct: 184 ANNN--IIANGGLQKDIQLWDCVSKKRITDLVGHTDNVRDILISDDGRTILTASSDATIK 241
Query: 249 VWNYKNDELTIKDIFESHLTKNVWGVDVEETNL-IAISGGNDGRLKVTEL--VPHNRSC 304
+W+ + + I S +VW + E +L + +G G + T++ P+N+SC
Sbjct: 242 LWSLRAQKCLFSFIAHS---DSVWALYSEHPDLKVFYAGDRSGLITRTDIRNQPNNQSC 297
>At5g13840 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 472
Score = 55.5 bits (132), Expect = 4e-07
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 6/150 (4%)
Query: 144 SIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDR 203
S++ R ++ GT + VW+ K++ T+ GH+ + N ++L+S S DR
Sbjct: 220 SVQWTREGSYISIGTSHGQVQVWDGTQCKRVRTMGGHQTRTGVLAW--NSRILSSGSRDR 277
Query: 204 SIIIWDM-VSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDI 262
+I+ D+ V +S+ GH + + LK+ +DD +L S D VWN + + +K
Sbjct: 278 NILQHDIRVQSDFVSKLVGHKSEVCGLKWSHDDRELASGGNDNQLLVWNNHSQQPILKLT 337
Query: 263 FESHLTKNV-WGVDVEETNLIAISGGNDGR 291
+ K + W +++L+A GG R
Sbjct: 338 EHTAAVKAITW--SPHQSSLLASGGGTADR 365
>At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 55.5 bits (132), Expect = 4e-07
Identities = 24/78 (30%), Positives = 44/78 (55%)
Query: 177 LRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDT 236
++GHE + ++ + NG LL SC+ D + +W +G+ L GH+ +W D +
Sbjct: 6 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISRDSS 65
Query: 237 QLISVSEDCTCRVWNYKN 254
+LI+ S D T ++W+ K+
Sbjct: 66 RLITGSADQTAKLWDVKS 83
>7302600 [R] KOG4155 FOG: WD40 repeat
Length = 1240
Score = 55.5 bits (132), Expect = 4e-07
Identities = 37/138 (26%), Positives = 63/138 (44%), Gaps = 10/138 (7%)
Query: 176 TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDD 235
TL GH + + + NG+ LA+ S+DR + IW++ G++ + GHTA + + D
Sbjct: 779 TLEGHTAGVSCLKFAPNGEFLATGSEDRLVHIWNLALGEICNSFKGHTAPVVKVVVLMDS 838
Query: 236 TQLISVSEDCTCRVWNYKNDEL--TIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLK 293
++IS D VW + L TI+ ++S + V A+S D LK
Sbjct: 839 LRVISTDRDSMLLVWMAHSGNLLQTIQGPYKS--------LSVTNNMRFAVSTNGDNTLK 890
Query: 294 VTELVPHNRSCNIELSLE 311
+ L + ++ S E
Sbjct: 891 IWSLTQEDEKYSVSHSDE 908
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 55.5 bits (132), Expect = 4e-07
Identities = 36/135 (26%), Positives = 73/135 (53%), Gaps = 8/135 (5%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAW 220
N I +W+ + + TL GH GS+ + + K++ S S D ++ +WD+ +G++++
Sbjct: 230 NTIKIWDRTDLQCVKTLMGHTGSV--LCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTLI 287
Query: 221 GHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKN-DELTIKDIFESHLTKNVWGVDVEET 279
H + +L+F N +++ S+D + VW+ + E+T++ + H V VD +E
Sbjct: 288 HHCEAVLHLRFNNG--MMVTCSKDRSIAVWDMTSPSEITLRRVLVGHRAA-VNVVDFDEK 344
Query: 280 NLIAISGGNDGRLKV 294
+++ SG D +KV
Sbjct: 345 YIVSASG--DRTIKV 357
Score = 55.1 bits (131), Expect = 5e-07
Identities = 41/163 (25%), Positives = 89/163 (54%), Gaps = 17/163 (10%)
Query: 141 YSGSIKVLRH--KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLAS 198
++GS+ L++ KV+++ G+ + + VW++++ + ++TL H ++ ++ +N ++ +
Sbjct: 249 HTGSVLCLQYDDKVIIS-GSSDSTVRVWDVNTGEMVNTLIHHCEAVLHLRFNNG--MMVT 305
Query: 199 CSDDRSIIIWDMVSGK---LLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND 255
CS DRSI +WDM S L GH A + + F D+ ++S S D T +VW+ +
Sbjct: 306 CSKDRSIAVWDMTSPSEITLRRVLVGHRAAVNVVDF--DEKYIVSASGDRTIKVWSTSSC 363
Query: 256 ELTIKDIFESHLTKNVWGVD-VEETNLIAISGGNDGRLKVTEL 297
E F L + G+ ++ + + +SG +D +++ ++
Sbjct: 364 E------FVRTLNGHKRGIACLQYRDRLVVSGSSDNSIRLWDI 400
Score = 54.7 bits (130), Expect = 7e-07
Identities = 59/261 (22%), Positives = 116/261 (43%), Gaps = 27/261 (10%)
Query: 5 LNHVGPSLAVKFYEKWCLC-SQGPFIEVFDYSNGSSINRCHIFHRNKVHGISIDKTSGNV 63
+ H G L +++ +K + S + V+D + G +N I H V + + + +
Sbjct: 247 MGHTGSVLCLQYDDKVIISGSSDSTVRVWDVNTGEMVNTL-IHHCEAVLHL---RFNNGM 302
Query: 64 LVYGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKEEIYLLTSYNRVLIIDPD 123
+V S+ SI + D+ S SE+ + + G F+++ I + + +
Sbjct: 303 MVTCSKDRSIA-VWDMTSPSEITLRRVLVGHRAAVNVVDFDEKYIVSASGDRTIKV---- 357
Query: 124 NFTVKSTHFVEGERSILYSGSIKVLRHKV-LVNAGTIMNGIIVWELDSKKKIHTLRGHEG 182
++ S FV + I L+++ LV +G+ N I +W+++ + L GHE
Sbjct: 358 -WSTSSCEFVRTLNG--HKRGIACLQYRDRLVVSGSSDNSIRLWDIECGACLRVLEGHEE 414
Query: 183 SIFYVTTSNNGKLLASCSDDRSIIIWDMVSG---------KLLSRAWGHTARIWNLKFFN 233
+ + K + S + D I +WD+V+ L+ HT R++ L+F
Sbjct: 415 LVRCIRFDT--KRIVSGAYDGKIKVWDLVAALDPRAASNTLCLNTLVEHTGRVFRLQF-- 470
Query: 234 DDTQLISVSEDCTCRVWNYKN 254
D+ Q++S S D T +W++ N
Sbjct: 471 DEFQIVSSSHDDTILIWDFLN 491
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 55.1 bits (131), Expect = 5e-07
Identities = 43/145 (29%), Positives = 73/145 (49%), Gaps = 13/145 (8%)
Query: 157 GTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLL 216
GT I +W+L ++K + GHE I+ + S+NG+ + S S DR+ +WD+ +G+ +
Sbjct: 378 GTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDFSHNGRFIVSGSGDRTARLWDVETGQCI 437
Query: 217 SRAW---GHTARIWNLKFFNDDTQLISV-SEDCTCRVWNYKNDELTIKDIFESHLTKNVW 272
+ G TA + + Q I+V S D RVW+ T+ + E H ++V+
Sbjct: 438 LKLEIENGVTAIA-----ISPNDQFIAVGSLDQIIRVWSVSG---TLVERLEGH-KESVY 488
Query: 273 GVDVEETNLIAISGGNDGRLKVTEL 297
+ + I +SG D +KV EL
Sbjct: 489 SIAFSPDSSILLSGSLDKTIKVWEL 513
>7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 787
Score = 55.1 bits (131), Expect = 5e-07
Identities = 32/115 (27%), Positives = 56/115 (47%), Gaps = 4/115 (3%)
Query: 180 HEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLI 239
H+ + V + N KL+A+ S D++ +W S L GHT +W+++F D ++
Sbjct: 477 HDKEVNCVAYAPNNKLIATASQDKTAKVWLAESNTLQGVLRGHTRGVWSVRFSPVDQIVL 536
Query: 240 SVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLKV 294
+ S DCT R+W+ N + F+ T + + + IS +DG LK+
Sbjct: 537 TSSSDCTLRIWSISNFSCIKR--FDQECT--ILRAEFLDHGKFIISAASDGLLKL 587
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 54.7 bits (130), Expect = 7e-07
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 3/122 (2%)
Query: 176 TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDD 235
TL GHE S+ V+ S N + +A+ S D +I IW ++ +L +GH I +K+
Sbjct: 49 TLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGS 108
Query: 236 TQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLKVT 295
L S S+D T R+W+++ +++ + H T V +D + +SG D +++
Sbjct: 109 KYLASASDDKTIRIWDFEK-RCSVR-CLKGH-TNYVSSIDFNPLGTLLVSGSWDETVRIW 165
Query: 296 EL 297
L
Sbjct: 166 NL 167
Score = 52.0 bits (123), Expect = 5e-06
Identities = 37/136 (27%), Positives = 64/136 (46%), Gaps = 3/136 (2%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
I +W + + TL GH I V + K LAS SDD++I IWD + GH
Sbjct: 78 IKIWSALTFRLECTLFGHYRGISQVKWATGSKYLASASDDKTIRIWDFEKRCSVRCLKGH 137
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLI 282
T + ++ F T L+S S D T R+WN ++ T + +H ++ + V + +
Sbjct: 138 TNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDG--TCLRMLPAH-SEPIISVSISADGTL 194
Query: 283 AISGGNDGRLKVTELV 298
+ DG ++ +++
Sbjct: 195 CATASYDGMARIWDVL 210
>Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 522
Score = 54.7 bits (130), Expect = 7e-07
Identities = 32/133 (24%), Positives = 61/133 (45%), Gaps = 3/133 (2%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W LDS + + + GH + V +G+ L + DRS +WD+ + + + GH+
Sbjct: 307 LWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSM 366
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAI 284
++++ F D + + D RVW+ + + E HL K ++G++
Sbjct: 367 GVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIM--FLEGHL-KEIYGINFSPNGYHIA 423
Query: 285 SGGNDGRLKVTEL 297
+G D KV +L
Sbjct: 424 TGSGDNTCKVWDL 436
>Hs22057360 [S] KOG1408 WD40 repeat protein
Length = 1514
Score = 54.7 bits (130), Expect = 7e-07
Identities = 30/89 (33%), Positives = 50/89 (55%), Gaps = 1/89 (1%)
Query: 171 KKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLK 230
KK +G +G++ V T +G +A+ D+++ I+D SG+ ++ +GH+ + +K
Sbjct: 651 KKLFKGSQGEDGTLIKVQTDPSGIYIATSCSDKNLSIFDFSSGECVATMFGHSEIVTGMK 710
Query: 231 FFNDDTQLISVSEDCTCRVWNYKNDELTI 259
F ND LISVS D VW + E+TI
Sbjct: 711 FSNDCKHLISVSGDSCIFVWRL-SSEMTI 738
>ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 423
Score = 54.7 bits (130), Expect = 7e-07
Identities = 47/160 (29%), Positives = 80/160 (49%), Gaps = 21/160 (13%)
Query: 174 IHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFN 233
I T GH+G ++ T N K L S S D++ IWD+ +G L GH + + +LK ++
Sbjct: 147 IRTFVGHKGGVW--TFMFNDKYLVSGSTDKTARIWDLWTGCTLCVLIGHKSVVRSLKIYD 204
Query: 234 DDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLK 293
D + + S D R+WN++ T ++ + H T +V +D+ E+ L +SG DG +
Sbjct: 205 D--YIATGSRDAEIRIWNFRG---TCLNVLKGH-TMSVRCMDMGESYL--VSGSYDGSVA 256
Query: 294 VTE---------LVPHN-RSCNIELSLESI-SEQCDGFIH 322
+ + L PH+ R ++ LS + S D +H
Sbjct: 257 LWDYRRGKLLRYLKPHSLRVYSVSLSSSYVASGSLDSSVH 296
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 54.7 bits (130), Expect = 7e-07
Identities = 32/101 (31%), Positives = 54/101 (52%), Gaps = 1/101 (0%)
Query: 154 VNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSG 213
+ +G+ I +W +D + TL GH I + S++ KL+ SCSDD+ + ++D+ SG
Sbjct: 122 MGSGSADCSIKIWRMDFVYE-KTLMGHRLGINEFSWSSDSKLIVSCSDDKLVKVFDVSSG 180
Query: 214 KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKN 254
+ + GHT ++ F T + S S D T R+W +N
Sbjct: 181 RCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCARN 221
>At3g18140 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 305
Score = 54.7 bits (130), Expect = 7e-07
Identities = 34/115 (29%), Positives = 52/115 (44%), Gaps = 7/115 (6%)
Query: 144 SIKVLRHKVLVNAGTIMNGIIVWELDSKKK-------IHTLRGHEGSIFYVTTSNNGKLL 196
S+ V+ +V A VW L K+ +H L+ H G I S K L
Sbjct: 167 SLTVMWDGTMVVAANNRGTCYVWRLLRGKQTMTEFEPLHKLQAHNGHILKCLLSPANKYL 226
Query: 197 ASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWN 251
A+ S D+++ IW++ KL GH +W+ F D L++ S D T R+W+
Sbjct: 227 ATASSDKTVKIWNVDGFKLEKVLTGHQRWVWDCVFSVDGEFLVTASSDMTARLWS 281
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 54.7 bits (130), Expect = 7e-07
Identities = 34/133 (25%), Positives = 61/133 (45%), Gaps = 4/133 (3%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W+ D + T GH + V +GK L + S D++ +WD+ +G L GH+
Sbjct: 324 LWKTDGTL-LQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSR 382
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAI 284
++ + F D S D RVW+ + + +F+ H+ K V+ V+
Sbjct: 383 SVYGIAFQQDGALAASCGLDSLARVWDLRTGRSIL--VFQGHI-KPVFSVNFSPNGYHLA 439
Query: 285 SGGNDGRLKVTEL 297
SGG D + ++ +L
Sbjct: 440 SGGEDNQCRIWDL 452
Score = 54.3 bits (129), Expect = 9e-07
Identities = 23/89 (25%), Positives = 47/89 (51%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W++++ ++ GH S++ + +G L ASC D +WD+ +G+ + GH
Sbjct: 365 LWDINTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIK 424
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYK 253
++++ F + L S ED CR+W+ +
Sbjct: 425 PVFSVNFSPNGYHLASGGEDNQCRIWDLR 453
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 54.7 bits (130), Expect = 7e-07
Identities = 54/261 (20%), Positives = 106/261 (39%), Gaps = 18/261 (6%)
Query: 47 HRNKVHGISIDKTSGNVLVYGSRSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFSFNKE 106
HRN V+ + +D +G + G + V S + + + +W+ N
Sbjct: 27 HRNGVNALQLDANNGKLYSAGRDAIIRVWNTRTDSSEKYIQSMEHHNDWVNDIVLCCNGR 86
Query: 107 EIYLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVW 166
+ + V + + ST + Y ++ + + V + + I +W
Sbjct: 87 NLISASCDTTVKVWNAQKGFCMSTLRTHRD----YVQALAYAKDREQVASAGLDKAIFLW 142
Query: 167 ELDSKKKI---------HTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLS 217
++++ + +L G + SI+ + + +G ++ S S + + IWD +
Sbjct: 143 DVNTLTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRIWDPRTCMRRM 202
Query: 218 RAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTK-NVWGVDV 276
+ GHT + L D Q++S S D T +VWN + ++ I H+ K VW + +
Sbjct: 203 KLRGHTENVRCLVVSPDGNQVVSGSSDGTIKVWNL-GQQRCVQTI---HVHKEGVWSLLM 258
Query: 277 EETNLIAISGGNDGRLKVTEL 297
E ISG D + VTE+
Sbjct: 259 SENFQYIISGSRDRNIIVTEM 279
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 54.7 bits (130), Expect = 7e-07
Identities = 41/158 (25%), Positives = 73/158 (45%), Gaps = 10/158 (6%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWD-MVSGKLLSRAWG 221
I +W+ ++ + +L+GH S+ V GKLLASCS D SI +WD S + + G
Sbjct: 132 IRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQSYECIKTMHG 191
Query: 222 HTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVW--GVDVEET 279
H + ++ F ++S S D T ++W E+ +++ W V V
Sbjct: 192 HDHNVSSVAFVPAGDYVLSASRDRTIKMW-----EVATGYCVKTYTGHREWVRMVRVHIE 246
Query: 280 NLIAISGGNDGRLKVTELVPHNRSCNIELSLESISEQC 317
I + ND ++V + +++ C +EL + +C
Sbjct: 247 GSIFATCSNDQTIRV--WLTNSKDCKVELRDHEHTVEC 282
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 54.7 bits (130), Expect = 7e-07
Identities = 37/147 (25%), Positives = 64/147 (43%), Gaps = 3/147 (2%)
Query: 154 VNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSG 213
+ +G I I ++++ + K + TL GH + + S N +LL + SDD + ++D+
Sbjct: 185 IASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMKLYDVTHS 244
Query: 214 KLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWG 273
++ GH + + + F D S S D + ++W+ E F H T VWG
Sbjct: 245 DVVGTLSGHASWVLCVAFSEDGKHFASSSSDNSVKIWD--TSERKCLHTFAEH-TDQVWG 301
Query: 274 VDVEETNLIAISGGNDGRLKVTELVPH 300
V N S D L + P+
Sbjct: 302 VRYSPGNDKVASASEDKSLNIYYCPPN 328
>CE29560 [S] KOG0300 WD40 repeat-containing protein
Length = 486
Score = 54.3 bits (129), Expect = 9e-07
Identities = 25/91 (27%), Positives = 53/91 (57%), Gaps = 2/91 (2%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSG-KLLSRAWGHT 223
VW+++ + ++ L GHE + + +T +N KL+ + S D + +WD + ++ GH
Sbjct: 306 VWDVEKGEVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQ 365
Query: 224 ARIWNLKFFNDDTQLISVSEDCTCRVWNYKN 254
+ ++ FN D +++S S+D T ++W+ +N
Sbjct: 366 DSVTSVS-FNTDYRIVSSSDDATVKIWDLRN 395
>CE26861 [S] KOG0300 WD40 repeat-containing protein
Length = 484
Score = 54.3 bits (129), Expect = 9e-07
Identities = 25/91 (27%), Positives = 53/91 (57%), Gaps = 2/91 (2%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSG-KLLSRAWGHT 223
VW+++ + ++ L GHE + + +T +N KL+ + S D + +WD + ++ GH
Sbjct: 304 VWDVEKGEVVNILSGHESELNHCSTHSNQKLVLTSSKDSTFRLWDFREAIQSVAVFQGHQ 363
Query: 224 ARIWNLKFFNDDTQLISVSEDCTCRVWNYKN 254
+ ++ FN D +++S S+D T ++W+ +N
Sbjct: 364 DSVTSVS-FNTDYRIVSSSDDATVKIWDLRN 393
>At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 343
Score = 54.3 bits (129), Expect = 9e-07
Identities = 37/158 (23%), Positives = 73/158 (45%), Gaps = 4/158 (2%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
I +W I T + H + V +++ SC DR + WD+ +G+++ + GH
Sbjct: 42 IRLWNPHRGILIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGH 101
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLI 282
+ +KF + + ++S D + RVW+ ++ + I ++ L V V + +T +
Sbjct: 102 DGEVNAVKFNDSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFL-DTVMSVVLTKTEI- 159
Query: 283 AISGGNDGRLKVTEL-VPHNRSCNIELSLESISEQCDG 319
I G DG ++ ++ + S N+ + IS DG
Sbjct: 160 -IGGSVDGTVRTFDMRIGREMSDNLGQPVNCISISNDG 196
Score = 51.6 bits (122), Expect = 6e-06
Identities = 31/130 (23%), Positives = 58/130 (43%), Gaps = 3/130 (2%)
Query: 172 KKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKF 231
K+ H L+GHEG++ + +G +C DR+I +W+ G L+ H + ++
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHV 68
Query: 232 FNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGR 291
+D+ + S D W+ + K F H V V +++ + +S G D
Sbjct: 69 TSDNAKFCSCGGDRQVYYWDVSTGRVIRK--FRGH-DGEVNAVKFNDSSSVVVSAGFDRS 125
Query: 292 LKVTELVPHN 301
L+V + H+
Sbjct: 126 LRVWDCRSHS 135
>At3g16650 [A] KOG0285 Pleiotropic regulator 1
Length = 477
Score = 54.3 bits (129), Expect = 9e-07
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 4/141 (2%)
Query: 157 GTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLL 216
G+ I +W++ + TL GH G + + SN + S DD+ + WD+ K++
Sbjct: 186 GSADRTIKIWDVATGVLKLTLTGHIGQVRGLAVSNRHTYMFSAGDDKQVKCWDLEQNKVI 245
Query: 217 SRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDV 276
GH ++ L +++ D CRVW+ + T IF +V+ V
Sbjct: 246 RSYHGHLHGVYCLALHPTLDVVLTGGRDSVCRVWDIR----TKMQIFVLPHDSDVFSVLA 301
Query: 277 EETNLIAISGGNDGRLKVTEL 297
T+ I+G +D +K +L
Sbjct: 302 RPTDPQVITGSHDSTIKFWDL 322
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 54.3 bits (129), Expect = 9e-07
Identities = 65/255 (25%), Positives = 115/255 (44%), Gaps = 37/255 (14%)
Query: 52 HGISIDKTSGNVLVYGS-----RSFSIVN---INDLFSKSEVLDQEKMTGEWIMSGEFSF 103
H I+ + SGN +V GS + +S VN + L + + +M+G I+SG
Sbjct: 996 HVITCLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSSQMSGNIIISG---- 1051
Query: 104 NKEEIYLLTSYNRVLII-DPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNG 162
S +R L + D D+ H ++G S + + H V +G+
Sbjct: 1052 ---------STDRTLKVWDMDSGAC--VHTLQGHTSTVRCMHL----HGSKVVSGSRDAT 1096
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
+ VW+++ +H L GH ++ V +GKL+ S + D + IW + L GH
Sbjct: 1097 LRVWDIEQGSCLHVLVGHLAAVRCV--QYDGKLIVSGAYDYMVKIWHPERQECLHTLQGH 1154
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLI 282
T R+++L+F D ++S S D + RVW+ + + LT G+++ + I
Sbjct: 1155 TNRVYSLQF--DGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSLTS---GMELRQN--I 1207
Query: 283 AISGGNDGRLKVTEL 297
+SG D +KV ++
Sbjct: 1208 LVSGNADSTVKVWDI 1222
>CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 665
Score = 53.9 bits (128), Expect = 1e-06
Identities = 44/170 (25%), Positives = 90/170 (52%), Gaps = 19/170 (11%)
Query: 141 YSGSIKVLRH--KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLAS 198
++GS+ L++ +V+++ G+ + VW++++ + I TL H ++ ++ +N ++ +
Sbjct: 261 HTGSVLCLQYDNRVIIS-GSSDATVRVWDVETGECIKTLIHHCEAVLHLRFANG--IMVT 317
Query: 199 CSDDRSIIIWDMVSGK---LLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND 255
CS DRSI +WDMVS + + GH A + + F DD ++S S D T +VW+
Sbjct: 318 CSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKVWSMDTL 375
Query: 256 ELTIKDIFESHLTKNVWGVD-VEETNLIAISGGNDGRLKVTELVPHNRSC 304
E F L + G+ ++ + +SG +D +++ ++ H+ C
Sbjct: 376 E------FVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDI--HSGVC 417
>At2g22040 [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 312
Score = 53.9 bits (128), Expect = 1e-06
Identities = 25/80 (31%), Positives = 40/80 (49%)
Query: 174 IHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFN 233
+H L+ H I S K LA+ S D+++ IW++ KL GH +W+ F
Sbjct: 210 LHKLQAHNSHILKCLLSPGNKYLATASSDKTVKIWNLDGFKLEKVLTGHERWVWDCDFSM 269
Query: 234 DDTQLISVSEDCTCRVWNYK 253
D L++ S D T R+W+ +
Sbjct: 270 DGEYLVTASSDTTARLWSMR 289
>7294830 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 942
Score = 53.9 bits (128), Expect = 1e-06
Identities = 38/134 (28%), Positives = 63/134 (46%), Gaps = 4/134 (2%)
Query: 138 SILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSKKKI--HTLRGHEGSIFYVTTSNNGKL 195
S+ S ++V + L N T M G+ +D KK TL GH+G ++ + + +
Sbjct: 581 SLKPSKLVQVKAAQWLKNLDTGMAGVDKDMIDPIKKFTRRTLYGHQGPVYGCSFNPEDRF 640
Query: 196 LASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND 255
L +CS+D S+ +W ++S + GH A + + F + S+DCT RVW D
Sbjct: 641 LITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFVVFAPRGYYFATASDDCTARVW--MQD 698
Query: 256 ELTIKDIFESHLTK 269
I + HL +
Sbjct: 699 NTKPARILQGHLAE 712
>YBR103w [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 535
Score = 53.5 bits (127), Expect = 2e-06
Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
I V+++ K L GH G I + ++ KLL S SDD ++ IW +G + +GH
Sbjct: 341 IFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGH 400
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFE 264
+ I + + DD ++IS S D + R+W+ K + L I +
Sbjct: 401 SQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVD 441
>SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1
Length = 473
Score = 53.5 bits (127), Expect = 2e-06
Identities = 32/135 (23%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 163 IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGH 222
I +W+L S TL GH ++ + S L SC +D+ + WD+ + K++ GH
Sbjct: 187 IKIWDLASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGH 246
Query: 223 TARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLI 282
+ ++ LK L++ D RVW+ + + + H V + V+E +
Sbjct: 247 LSGVYALKLHPTLDVLVTAGRDAVARVWDMRTRQNV--HVLSGH-KSTVASLAVQEFDPQ 303
Query: 283 AISGGNDGRLKVTEL 297
++G D +++ +L
Sbjct: 304 VVTGSMDSTIRLWDL 318
>At5g50230 [R] KOG0288 WD40 repeat protein TipD
Length = 515
Score = 53.5 bits (127), Expect = 2e-06
Identities = 35/151 (23%), Positives = 72/151 (47%), Gaps = 14/151 (9%)
Query: 155 NAGTIMNG-----IIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWD 209
N+GT+ G + +W+ +S I +L G G+I + +++ K + + + ++ +WD
Sbjct: 242 NSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWD 301
Query: 210 MVSGKLLSRAWGHTARIWNL---KFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESH 266
+ SG++ GHT ++ + KF ++S + D T ++W+ T +F S+
Sbjct: 302 VSSGRVRHTLTGHTDKVCAVDVSKF--SSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSN 359
Query: 267 LTKNVWGVDVEETNLIAISGGNDGRLKVTEL 297
+D L SG DG L++ ++
Sbjct: 360 CNAICLSID----GLTVFSGHMDGNLRLWDI 386
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 53.5 bits (127), Expect = 2e-06
Identities = 39/154 (25%), Positives = 66/154 (42%), Gaps = 3/154 (1%)
Query: 144 SIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDR 203
S+ +VLV AG I +W+L+ K + GH + V G+ LAS S D
Sbjct: 12 SVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDT 71
Query: 204 SIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIF 263
++ +WD + GHT I ++F D ++S D +VW+ +L + F
Sbjct: 72 NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHE--F 129
Query: 264 ESHLTKNVWGVDVEETNLIAISGGNDGRLKVTEL 297
+ H + +D + +G D +K +L
Sbjct: 130 KCH-EGPIRSLDFHPLEFLLATGSADRTVKFWDL 162
Score = 53.1 bits (126), Expect = 2e-06
Identities = 41/156 (26%), Positives = 69/156 (43%), Gaps = 2/156 (1%)
Query: 102 SFNKEEIYLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMN 161
+FN EE+ +L + +I D K G RS +++ + +G+
Sbjct: 14 AFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRS--NCSAVEFHPFGEFLASGSSDT 71
Query: 162 GIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWG 221
+ VW+ K I T +GH I + S +G+ + S D + +WD+ +GKLL
Sbjct: 72 NLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKC 131
Query: 222 HTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDEL 257
H I +L F + L + S D T + W+ + EL
Sbjct: 132 HEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFEL 167
>SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 775
Score = 53.1 bits (126), Expect = 2e-06
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
VW+ + +H LRGH G ++ VT + + + S D I IW++ SG+LL GH+
Sbjct: 601 VWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESGELLQTLHGHSN 660
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWN 251
+ + F + S D + RVW+
Sbjct: 661 LVSQVTFNQNILVSASAPPDTSLRVWD 687
Score = 53.1 bits (126), Expect = 2e-06
Identities = 42/156 (26%), Positives = 78/156 (49%), Gaps = 15/156 (9%)
Query: 131 HFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTS 190
H + G +YS +I R + ++AGT I +W L+S + + TL GH + VT +
Sbjct: 611 HVLRGHVGRVYSVTINPSRQQC-ISAGTDAK-IRIWNLESGELLQTLHGHSNLVSQVTFN 668
Query: 191 NNGKLLASCSDDRSIIIWDMVSGK---LLSRAWGHTARIWNLKFFNDDTQLISVSEDCTC 247
N + AS D S+ +WD+ +G +L GH + F +D+++++S S T
Sbjct: 669 QNILVSASAPPDTSLRVWDLNTGSCRDILKCPLGH------IFFQHDESKVVSGSHS-TL 721
Query: 248 RVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIA 283
++W+ ++ +L ++D+ +W V E +A
Sbjct: 722 QLWDIRSGKL-VRDLLTD--LDIIWQVAYNENVCVA 754
Score = 52.8 bits (125), Expect = 3e-06
Identities = 46/161 (28%), Positives = 71/161 (43%), Gaps = 14/161 (8%)
Query: 174 IHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFN 233
I TLRGH S+ V G L+ S S D ++ +W +G L GH R++++
Sbjct: 570 IRTLRGHTDSVREVACL--GDLIVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINP 627
Query: 234 DDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGNDGRLK 293
Q IS D R+WN ++ EL S+L V + L++ S D L+
Sbjct: 628 SRQQCISAGTDAKIRIWNLESGELLQTLHGHSNLVSQ---VTFNQNILVSASAPPDTSLR 684
Query: 294 VTELVPHNRSCN--IELSLESISEQCDGFIHKANEIVKGFH 332
V +L + SC ++ L I F H +++V G H
Sbjct: 685 VWDL--NTGSCRDILKCPLGHIF-----FQHDESKVVSGSH 718
>SPAC343.04c [S] KOG0293 WD40 repeat-containing protein
Length = 507
Score = 53.1 bits (126), Expect = 2e-06
Identities = 26/80 (32%), Positives = 47/80 (58%)
Query: 172 KKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKF 231
K+ H H ++ ++ S+NG+ LAS S D++ II+D+V+ K + R GH + +++
Sbjct: 204 KEYHVFHDHSDEVWQISYSHNGRYLASASKDKTAIIFDVVNLKRVFRLIGHIDTVAYIRW 263
Query: 232 FNDDTQLISVSEDCTCRVWN 251
DD L+S S D + +W+
Sbjct: 264 SPDDRYLLSCSCDKSVILWD 283
Score = 52.0 bits (123), Expect = 5e-06
Identities = 39/153 (25%), Positives = 74/153 (47%), Gaps = 10/153 (6%)
Query: 164 IVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHT 223
I++++ + K++ L GH ++ Y+ S + + L SCS D+S+I+WD +G+ L R + H
Sbjct: 238 IIFDVVNLKRVFRLIGHIDTVAYIRWSPDDRYLLSCSCDKSVILWDAFTGEKL-RDYKHG 296
Query: 224 ARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIK----DIFESHLTKNVWGVDVEET 279
+ + D I+ S DC W+ N E+ K +I++ LT + G +
Sbjct: 297 FSVSCCCWLPDGLSFITGSPDCHITHWSL-NGEILYKWEDVNIYDMALTSD--GTKLYIV 353
Query: 280 NLIAISGGNDGRLKVTELVPHNRSCNIELSLES 312
+ D + + + R C ++SL+S
Sbjct: 354 GFEQLINAEDKHIAIYSV--ETRECIKKISLQS 384
>CE20751 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 683
Score = 53.1 bits (126), Expect = 2e-06
Identities = 57/277 (20%), Positives = 115/277 (40%), Gaps = 27/277 (9%)
Query: 47 HRNKVHGISIDKTSGNVLVYGS----RSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFS 102
+R+ V + D +G + GS R++S+ + D FS + G
Sbjct: 28 NRSAVSALQYDAQNGRLFTGGSDTIIRTWSVPHHKDAFSARGGVRSPGKNSPVQYQGSLE 87
Query: 103 FNKEEI--YLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLR-HKVLVN---- 155
+ + + +L + ++LI ++ TVK + + G I +R HK V+
Sbjct: 88 QHTDWVNDMILCGHGKILISASNDTTVKVWNIERDNKH----GFIDCIRTHKDYVSCLAY 143
Query: 156 --------AGTIMNGIIVWELDSK-KKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSII 206
+ + + I V+++++ K ++ L G + SI+ + T+ N L+ ++ I
Sbjct: 144 APIVEKAVSASFDHNIFVYDINANFKTVNNLIGCKDSIYSLATTPNLSLVLGAGTEKCIR 203
Query: 207 IWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESH 266
++D + + + + GHT + L +D T+ +S D T R+W+ I
Sbjct: 204 LFDPRTNEKIMKLRGHTDNVRALVVNDDGTRALSAGSDATIRLWDIGQQRCIATCIAHE- 262
Query: 267 LTKNVWGVDVEETNLIAISGGNDGRLKVTELVPHNRS 303
+ VW + V+ + S G D + T L +S
Sbjct: 263 --EGVWTLQVDSSFTTVYSAGKDKMVVKTPLYDFTKS 297
>CE03286 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 686
Score = 53.1 bits (126), Expect = 2e-06
Identities = 57/277 (20%), Positives = 115/277 (40%), Gaps = 27/277 (9%)
Query: 47 HRNKVHGISIDKTSGNVLVYGS----RSFSIVNINDLFSKSEVLDQEKMTGEWIMSGEFS 102
+R+ V + D +G + GS R++S+ + D FS + G
Sbjct: 28 NRSAVSALQYDAQNGRLFTGGSDTIIRTWSVPHHKDAFSARGGVRSPGKNSPVQYQGSLE 87
Query: 103 FNKEEI--YLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLR-HKVLVN---- 155
+ + + +L + ++LI ++ TVK + + G I +R HK V+
Sbjct: 88 QHTDWVNDMILCGHGKILISASNDTTVKVWNIERDNKH----GFIDCIRTHKDYVSCLAY 143
Query: 156 --------AGTIMNGIIVWELDSK-KKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSII 206
+ + + I V+++++ K ++ L G + SI+ + T+ N L+ ++ I
Sbjct: 144 APIVEKAVSASFDHNIFVYDINANFKTVNNLIGCKDSIYSLATTPNLSLVLGAGTEKCIR 203
Query: 207 IWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESH 266
++D + + + + GHT + L +D T+ +S D T R+W+ I
Sbjct: 204 LFDPRTNEKIMKLRGHTDNVRALVVNDDGTRALSAGSDATIRLWDIGQQRCIATCIAHE- 262
Query: 267 LTKNVWGVDVEETNLIAISGGNDGRLKVTELVPHNRS 303
+ VW + V+ + S G D + T L +S
Sbjct: 263 --EGVWTLQVDSSFTTVYSAGKDKMVVKTPLYDFTKS 297
>Hs14150011_2 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 342
Score = 53.1 bits (126), Expect = 2e-06
Identities = 62/228 (27%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 29 IEVFDYSNGSSINRCHIFHRNKVHGISIDKTSGNVLVYGSRSFSIVNINDLFSKSEVLDQ 88
I V+D N +N H N V + +S NVL GS + + D+ +E+ +
Sbjct: 133 IIVWDIQNLQKVNTIRA-HDNPVCTLV---SSHNVLFSGS--LKAIKVWDIVG-TELKLK 185
Query: 89 EKMTG--EWIMSGEFSFNKEEIYLLT-SYNRVLIIDPDNFTVKSTHFVEGERSILYSGSI 145
+++TG W+ + + YL + SY + I D T+ H ++ +YS I
Sbjct: 186 KELTGLNHWVRA----LVAAQSYLYSGSYQTIKIWDIR--TLDCIHVLQTSGGSVYS--I 237
Query: 146 KVLRHKVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIF---YVTTSNNGKLLASCSDD 202
V H ++ GT N I VW+++SK+++ TL GH G+++ ++T + K+ S S D
Sbjct: 238 AVTNHHIV--CGTYENLIHVWDIESKEQVRTLTGHVGTVYALAVISTPDQTKVF-SASYD 294
Query: 203 RSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVW 250
RS+ +W M + H + L +L S + D T +VW
Sbjct: 295 RSLRVWSMDNMICTQTLLRHQGSVTALAVSRG--RLFSGAVDSTVKVW 340
>ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 556
Score = 52.8 bits (125), Expect = 3e-06
Identities = 25/85 (29%), Positives = 47/85 (54%)
Query: 167 ELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARI 226
++ + + GH ++ + S+ GK LAS S DR++++WD+ S KLL + GH +
Sbjct: 434 DISTASVVRIFCGHTDTVTCMDVSHCGKFLASGSKDRTVLLWDIQSSKLLGKYVGHENTV 493
Query: 227 WNLKFFNDDTQLISVSEDCTCRVWN 251
+++ F + L S D + R+W+
Sbjct: 494 FSVSFCFYGSVLASCGADNSVRLWD 518
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/134 (24%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 127 VKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSK---------KKIHTL 177
+K T +EG + + K V + + I+VW++DS + + +L
Sbjct: 6 MKLTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSL 65
Query: 178 RGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQ 237
GH + V S++G+ S S D+++ +WD+ G + HT + ++ F D+ Q
Sbjct: 66 TGHNHFVSDVVISSDGQFALSGSWDKTLRLWDLNQGVSTRQFISHTKDVLSVAFSADNRQ 125
Query: 238 LISVSEDCTCRVWN 251
++S S D + ++WN
Sbjct: 126 IVSGSRDKSIKLWN 139
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 52.8 bits (125), Expect = 3e-06
Identities = 48/218 (22%), Positives = 93/218 (42%), Gaps = 10/218 (4%)
Query: 47 HRNKVHGISIDKTSGNVLVYGSRSFSIVNINDLFSKSEVLDQEKMTGEW-IMSGEFS--- 102
H V+ +SI K + + + G + VN+ + + ++ + + W + G S
Sbjct: 34 HSANVNCLSIGKKTSRLFITGGDDYK-VNLWAIGKPTSLMKNDAIAFYWQSLCGHTSAVD 92
Query: 103 ---FNKEEIYLLTSYNRVLIIDPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTI 159
F+ E+ +L + +I D K G RS +++ + +G+
Sbjct: 93 SVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRS--NCSAVEFHPFGEFLASGSS 150
Query: 160 MNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRA 219
+ +W++ K I T +GH I + + +G+ + S D + +WD+ +GKLL
Sbjct: 151 DANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEF 210
Query: 220 WGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDEL 257
H I +L F + L + S D T + W+ + EL
Sbjct: 211 KFHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFEL 248
Score = 51.2 bits (121), Expect = 8e-06
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 3/147 (2%)
Query: 151 KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDM 210
+VLV AG I +W+++ K + GH + V G+ LAS S D ++ IWD+
Sbjct: 100 EVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDI 159
Query: 211 VSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKN 270
+ GH+ I ++F D ++S D +VW+ +L + F+ H
Sbjct: 160 RKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHE--FKFH-EGP 216
Query: 271 VWGVDVEETNLIAISGGNDGRLKVTEL 297
+ +D + +G D +K +L
Sbjct: 217 IRSLDFHPLEFLLATGSADRTVKFWDL 243
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 52.8 bits (125), Expect = 3e-06
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 3/147 (2%)
Query: 151 KVLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDM 210
+VLV G N + +W + + +L GH SI V + + S D I WD+
Sbjct: 31 RVLVTGGEDRN-VNLWAIGQNECFMSLTGHNRSIDCVRFAYKDNFVYSADDIGIIRRWDL 89
Query: 211 VSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKN 270
S K+ S GH + L F ++S S D T R+W+ +N+ IK + H++ +
Sbjct: 90 NSQKIYSTLNGHMKSVRTLDFNPSGEYVVSGSNDTTVRLWDVQNENNCIK-VCRGHMS-H 147
Query: 271 VWGVDVEETNLIAISGGNDGRLKVTEL 297
V V L S G +G + + ++
Sbjct: 148 VNSVKFSPDGLWIASAGLEGSILIWDI 174
>CE20251_2 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 287
Score = 52.8 bits (125), Expect = 3e-06
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 8/140 (5%)
Query: 156 AGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKL 215
+G++ + VW+L ++ I TL GHE + V G+++ S SDD SI +WD+ + K
Sbjct: 153 SGSLDKTLKVWKLGEQESICTLEGHEKGVNCVEFLTGGRIV-SGSDDCSICVWDIQTQKC 211
Query: 216 LSRAWGHTARIWNLKFFND-DTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGV 274
+ A N+ F T +IS +ED T ++WN + L + FE W V
Sbjct: 212 IETL--KNAHKNNVTFVTPFKTWIISGAEDSTVKIWNSQTFSLEKELNFEK---GRAWCV 266
Query: 275 DVEETNLIAISGGNDGRLKV 294
+++ IA+ G + G + V
Sbjct: 267 AAGKSDAIAV-GFDSGAVTV 285
>YDL145c [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1201
Score = 52.4 bits (124), Expect = 3e-06
Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 1/100 (1%)
Query: 152 VLVNAGTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMV 211
+ V+AG I VW LD+ K ++TL GH + V + S SDD++I IW+
Sbjct: 67 IFVSAGDDYT-IKVWSLDTNKCLYTLTGHLDYVRTVFFHRELPWIISASDDQTIRIWNWQ 125
Query: 212 SGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWN 251
+ K ++ GH + +F D ++S S D T R+W+
Sbjct: 126 NRKEIACLTGHNHFVMCAQFHPTDDLIVSASLDETIRIWD 165
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 52.4 bits (124), Expect = 3e-06
Identities = 26/90 (28%), Positives = 47/90 (51%), Gaps = 1/90 (1%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W++ + + GH + + +G+ L++ S+D I +WD+ +GK L + GH
Sbjct: 635 MWDVSTGDSVRLFLGHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGK 694
Query: 225 R-IWNLKFFNDDTQLISVSEDCTCRVWNYK 253
I++L + + LIS D T RVW+ K
Sbjct: 695 NAIYSLSYSKEGNVLISGGADHTVRVWDLK 724
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/139 (20%), Positives = 68/139 (48%), Gaps = 1/139 (0%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W++++ ++ T GH G + ++ + + +L S + D S +WD+ G GH +
Sbjct: 168 LWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES 227
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAI 284
I + FF + + S+D TCR+++ + D+ + ++ + V ++ + +
Sbjct: 228 DINAICFFPNGNAFATGSDDATCRLFDLRADQ-ELMTYSHDNIICGITSVSFSKSGRLLL 286
Query: 285 SGGNDGRLKVTELVPHNRS 303
+G +D V + + +R+
Sbjct: 287 AGYDDFNCNVWDALKADRA 305
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 52.4 bits (124), Expect = 3e-06
Identities = 41/124 (33%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 177 LRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRA--WGHTARIWNLKFFND 234
L+GH G I+ S++G LAS D+ I +W+ V G+ + A GH I +KF D
Sbjct: 32 LQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWN-VFGECENFAVLKGHKGAIMEVKFNAD 90
Query: 235 DTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETN-LIAISGGNDGRLK 293
+ L+S D T RVW+ + F+SH T V VDV + S +DG +
Sbjct: 91 SSHLVSAGTDKTVRVWDMETGSCIRN--FKSH-TDIVNSVDVNRRGPQMICSASDDGTVM 147
Query: 294 VTEL 297
V ++
Sbjct: 148 VHDM 151
>CE06118 [D] KOG0642 Cell-cycle nuclear protein contains WD-40 repeats
Length = 638
Score = 52.4 bits (124), Expect = 3e-06
Identities = 34/123 (27%), Positives = 55/123 (44%), Gaps = 23/123 (18%)
Query: 163 IIVWELDSKKK------------IHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDM 210
I +W LD KK ++T RGH+G + + S G L + D +I +++
Sbjct: 383 IKLWNLDQKKDEKHNSGGTELEPVYTFRGHKGPVLCLVLSPTGDHLYTGGIDGNICCFNV 442
Query: 211 VSGK-----------LLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTI 259
S L GHT IW++ + + +++L+S S D T R+W N E I
Sbjct: 443 PSSNGDPFDSYDPRVLTETLTGHTDAIWSVAYHSSNSRLVSASSDSTVRLWEPGNGEPLI 502
Query: 260 KDI 262
+ I
Sbjct: 503 RTI 505
>At2g46280 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 52.4 bits (124), Expect = 3e-06
Identities = 28/108 (25%), Positives = 52/108 (47%), Gaps = 4/108 (3%)
Query: 177 LRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDT 236
++GHE + ++ + G LL SC+ D + +W +G+ L GH +W D +
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSRDSS 65
Query: 237 QLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAI 284
+LI+ S D T ++W+ K+ K++F VD + +A+
Sbjct: 66 RLITGSADQTAKLWDVKSG----KELFTFKFNAPTRSVDFAVGDRLAV 109
>7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 436
Score = 52.4 bits (124), Expect = 3e-06
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 5/144 (3%)
Query: 157 GTIMNGIIVWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVS-GKL 215
G+ + +W++ SK H LRGH + + +G L+A+ S D + IWD +
Sbjct: 254 GSFDHSAAIWDVRSKSLGHQLRGHSAELSNCVWNFSGSLIATGSLDNTARIWDTRKLDQE 313
Query: 216 LSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYK-NDELTIKDIFESHLTKNVWGV 274
L A H+ + ++ F L + S DCT RVW + + EL + + H + V V
Sbjct: 314 LYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVWRLEGSSELEMLSLMAGH-SDEVSKV 372
Query: 275 DVEETN--LIAISGGNDGRLKVTE 296
+ L+ S N RL +TE
Sbjct: 373 CFSPSGCMLLTASADNTARLWLTE 396
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 52.0 bits (123), Expect = 5e-06
Identities = 27/82 (32%), Positives = 47/82 (56%)
Query: 187 VTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCT 246
V S +GK LA+ ++DR I IWD+ + K++ GH I++L +F +L+S S D T
Sbjct: 449 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRT 508
Query: 247 CRVWNYKNDELTIKDIFESHLT 268
R+W+ + + ++ E +T
Sbjct: 509 VRIWDLRTGQCSLTLSIEDGVT 530
>Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 52.0 bits (123), Expect = 5e-06
Identities = 47/157 (29%), Positives = 70/157 (43%), Gaps = 28/157 (17%)
Query: 124 NFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTIMNGIIVWELDSKK-KIHTLRGHEG 182
N T K +H V+ + + S +L G+ + +W+L + K K+HT H+
Sbjct: 259 NTTSKPSHLVDAHTAEVNCLSFNPYSEFILAT-GSADKTVALWDLRNLKLKLHTFESHKD 317
Query: 183 SIFYVTTS-NNGKLLASCSDDRSIIIWDMVS--------------GKLLSRAWGHTARI- 226
IF V S +N +LAS DR + +WD+ +LL GHTA+I
Sbjct: 318 EIFQVHWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 227 ---WNLKFFNDDTQLISVSEDCTCRVW----NYKNDE 256
WN N+ + SVSED ++W N NDE
Sbjct: 378 DFSWNP---NEPWVICSVSEDNIMQIWQMAENIYNDE 411
>CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 52.0 bits (123), Expect = 5e-06
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 3/126 (2%)
Query: 169 DSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWN 228
++K+ I+ + GH + V S + + +AS S D+S+ +W +GK L+ GH ++
Sbjct: 348 ETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQ 407
Query: 229 LKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAISGGN 288
+ + D L+S S D T +V+ K L H V+ VD +SGG
Sbjct: 408 VAWSADSRLLVSGSADSTLKVFELKTKSLYYD--LPGH-GDEVFTVDWSPEGTKVVSGGK 464
Query: 289 DGRLKV 294
D LK+
Sbjct: 465 DKVLKL 470
>7303130 [R] KOG0645 WD40 repeat protein
Length = 335
Score = 52.0 bits (123), Expect = 5e-06
Identities = 28/95 (29%), Positives = 45/95 (46%), Gaps = 3/95 (3%)
Query: 175 HTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSR---AWGHTARIWNLKF 231
HTL+GH+G I+ V G + ASC +D++I IW + ++ + GH I +++
Sbjct: 8 HTLQGHKGRIWGVAWHPKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRW 67
Query: 232 FNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESH 266
L S S D T +W+ + E E H
Sbjct: 68 SPCGQYLASASFDATTAIWSKSSGEFECNATLEGH 102
>7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 52.0 bits (123), Expect = 5e-06
Identities = 62/241 (25%), Positives = 109/241 (44%), Gaps = 35/241 (14%)
Query: 47 HRNKVHGISIDKTSGNVLVYGSRSFSIV--NINDLFSKSEVLDQEKM-TGEWIMSGEFSF 103
H+ + +G+S + L+ S +I +IN + V+D + + TG + + ++
Sbjct: 180 HQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAW 239
Query: 104 N--KEEIYLLTSYNRVLII--DPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTI 159
+ E ++ + ++ L+I +N T K +H V+ + + S +L G+
Sbjct: 240 HLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILAT-GSA 298
Query: 160 MNGIIVWELDSKK-KIHTLRGHEGSIFYVTTS-NNGKLLASCSDDRSIIIWDMVS----- 212
+ +W+L + K K+H+ H+ IF V S +N +LAS DR + +WD+
Sbjct: 299 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358
Query: 213 ---------GKLLSRAWGHTARI----WNLKFFNDDTQLISVSEDCTCRVW----NYKND 255
+LL GHTA+I WN N+ + SVSED +VW N ND
Sbjct: 359 STEDAEDGPPELLFIHGGHTAKISDFSWNP---NEPWIICSVSEDNIMQVWQMAENVYND 415
Query: 256 E 256
E
Sbjct: 416 E 416
>At2g26060 [R] KOG0645 WD40 repeat protein
Length = 323
Score = 51.6 bits (122), Expect = 6e-06
Identities = 36/129 (27%), Positives = 64/129 (48%), Gaps = 8/129 (6%)
Query: 174 IHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRA---WGHTARIWNLK 230
I TL GHE + V+ + +G LA+CS D+S+ IW+++ G A GHT + ++
Sbjct: 103 ISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQ 162
Query: 231 FFNDDTQLISVSEDCTCRVWNYKNDE---LTIKDIFESH--LTKNVWGVDVEETNLIAIS 285
+ L S S D T +VW ++D+ ++ + ES+ + VW + ++
Sbjct: 163 WHPTMDVLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMVT 222
Query: 286 GGNDGRLKV 294
+D LK+
Sbjct: 223 CSDDLTLKI 231
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 51.6 bits (122), Expect = 6e-06
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
+W+L + + I +L GH + V S G L+ASCSDD ++ +WD S + GH+
Sbjct: 82 LWDLSATRCIQSLAGHGDGVNDVAWSAAG-LIASCSDDMTVRLWDARSKLCVKVLEGHSR 140
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAI 284
++ F L S S D T R+W+ + + T+K I +H + VD I +
Sbjct: 141 YSFSCCFNPQANLLASTSFDETVRLWDVRTGK-TLK-IVHAH-QDPITSVDFHRDGNIFV 197
Query: 285 SGGNDGRLKV 294
+ DG +++
Sbjct: 198 TSSYDGLVRL 207
>7296910 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 326
Score = 51.6 bits (122), Expect = 6e-06
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 177 LRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDDT 236
L+GHE SI + + G LL SCS D+ +W ++G+ L GH +W L +
Sbjct: 6 LQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDVDWESR 65
Query: 237 QLISVSEDCTCRVWN 251
+LI+ + D T ++W+
Sbjct: 66 KLITGAGDMTAKIWD 80
>7296030_1 [S] KOG1408 WD40 repeat protein
Length = 793
Score = 51.6 bits (122), Expect = 6e-06
Identities = 27/94 (28%), Positives = 50/94 (52%), Gaps = 3/94 (3%)
Query: 165 VWELDSKKKIHTLRGH---EGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWG 221
V+ + K+ T +G EGS+ ++ +G +A+ D+++ ++D S + ++R +G
Sbjct: 628 VYGTQNAKQTKTFKGSHSDEGSLIKLSLDPSGIYVATSCTDKTLAVYDYYSNECMARMYG 687
Query: 222 HTARIWNLKFFNDDTQLISVSEDCTCRVWNYKND 255
H+ + LKF ND LIS S D +W +D
Sbjct: 688 HSELVTGLKFTNDCRHLISASGDGCIFIWQVPHD 721
>SPBPJ4664.04 [U] KOG0292 Vesicle coat complex COPI alpha subunit
Length = 1207
Score = 51.2 bits (121), Expect = 8e-06
Identities = 27/87 (31%), Positives = 44/87 (50%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
VW S+K + +L GH + T + + SCSDD++I IW+ S ++ GH+
Sbjct: 79 VWNYKSRKLLFSLCGHMDYVRVCTFHHEYPWILSCSDDQTIRIWNWQSRNCIAILTGHSH 138
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWN 251
+ F + ++S S D T RVW+
Sbjct: 139 YVMCAAFHPSEDLIVSASLDQTVRVWD 165
>Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 51.2 bits (121), Expect = 8e-06
Identities = 62/241 (25%), Positives = 110/241 (44%), Gaps = 35/241 (14%)
Query: 47 HRNKVHGISIDKTSGNVLVYGSRSFSIV--NINDLFSKSEVLDQEKM-TGEWIMSGEFSF 103
H+ + +G+S + L+ S +I +I+ + + +V+D + + TG + + S+
Sbjct: 176 HQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSW 235
Query: 104 N--KEEIYLLTSYNRVLII--DPDNFTVKSTHFVEGERSILYSGSIKVLRHKVLVNAGTI 159
+ E ++ + ++ L+I N T K +H V+ + + S +L G+
Sbjct: 236 HLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILAT-GSA 294
Query: 160 MNGIIVWELDSKK-KIHTLRGHEGSIFYVTTS-NNGKLLASCSDDRSIIIWDMVS----- 212
+ +W+L + K K+H+ H+ IF V S +N +LAS DR + +WD+
Sbjct: 295 DKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQ 354
Query: 213 ---------GKLLSRAWGHTARI----WNLKFFNDDTQLISVSEDCTCRVW----NYKND 255
+LL GHTA+I WN N+ + SVSED +VW N ND
Sbjct: 355 SPEDAEDGPPELLFIHGGHTAKISDFSWNP---NEPWVICSVSEDNIMQVWQMAENIYND 411
Query: 256 E 256
E
Sbjct: 412 E 412
>CE25603 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 318
Score = 51.2 bits (121), Expect = 8e-06
Identities = 21/76 (27%), Positives = 41/76 (53%)
Query: 176 TLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTARIWNLKFFNDD 235
+L+GHE ++ V + G L SC+ D+ +W +G+ + GH +W++ D
Sbjct: 5 SLKGHERALTRVRFNREGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDIDVSWDT 64
Query: 236 TQLISVSEDCTCRVWN 251
T+ ++ S D T ++W+
Sbjct: 65 TKCVTASGDLTVKIWD 80
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 51.2 bits (121), Expect = 8e-06
Identities = 34/139 (24%), Positives = 71/139 (50%), Gaps = 10/139 (7%)
Query: 163 IIVWEL-DSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWG 221
I +W++ + + + + GH G++ + +G + +CS D+++ WD+ +G+ R G
Sbjct: 79 IYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAFWDIATGQRQRRFKG 138
Query: 222 HTARIWNLKFFNDDTQLI-SVSEDCTCRVWN--YKNDELTIKDIFESHLTKNVWGVDVEE 278
H + +++ QL+ S S+D T ++W+ K+ T++ F+ V V +
Sbjct: 139 HGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTLESPFQ------VTAVCFGD 192
Query: 279 TNLIAISGGNDGRLKVTEL 297
T ISGG D +K+ ++
Sbjct: 193 TGEQVISGGIDNEVKIWDI 211
>7290304 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 535
Score = 51.2 bits (121), Expect = 8e-06
Identities = 31/130 (23%), Positives = 65/130 (49%), Gaps = 1/130 (0%)
Query: 165 VWELDSKKKIHTLRGHEGSIFYVTTSNNGKLLASCSDDRSIIIWDMVSGKLLSRAWGHTA 224
++ L + + L + + + T +G+LLA+ ++ + ++D S +L GHTA
Sbjct: 65 IYNLVTMLVVKNLSRFQKTAYGATFRQDGRLLAAGDEEGHVKLFDTTSRNILRLFKGHTA 124
Query: 225 RIWNLKFFNDDTQLISVSEDCTCRVWNYKNDELTIKDIFESHLTKNVWGVDVEETNLIAI 284
+ F D QL S +D + R+W+ N+++ ++ ++H G + + +
Sbjct: 125 PVHRTFFTADKLQLASFGDDKSVRLWDVANEKV-VQTYEDTHTDYVRAGAMHPQAGHMFV 183
Query: 285 SGGNDGRLKV 294
SGG DG++K+
Sbjct: 184 SGGYDGKIKL 193
>Hs7108333_2 [R] KOG4155 FOG: WD40 repeat
Length = 668
Score = 51.2 bits (121), Expect = 8e-06
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTT--------SNNGKLLASCSDDRSIIIWDMVS 212
N ++V +D +++ + G G I Y+T S + + +A ++ +I I ++V+
Sbjct: 353 NEVMVLAVDHIRRLQLINGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILELVN 412
Query: 213 GKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDEL--------TIKDIFE 264
++ + H +W+++F D+ LIS S+D +VWN++ D+ T+KD
Sbjct: 413 NRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETVKDF-- 470
Query: 265 SHLTKNVWGVDVEETNLIAISGGNDGRLKVTELVPHNR 302
L K N +S DG +KV ++ N+
Sbjct: 471 -RLLK----------NSRLLSWSFDGTVKVWNIITGNK 497
>Hs4502123_2 [R] KOG4155 FOG: WD40 repeat
Length = 625
Score = 51.2 bits (121), Expect = 8e-06
Identities = 38/158 (24%), Positives = 74/158 (46%), Gaps = 29/158 (18%)
Query: 161 NGIIVWELDSKKKIHTLRGHEGSIFYVTT--------SNNGKLLASCSDDRSIIIWDMVS 212
N ++V +D +++ + G G I Y+T S + + +A ++ +I I ++V+
Sbjct: 310 NEVMVLAVDHIRRLQLINGRTGQIDYLTEAQVSCCCLSPHLQYIAFGDENGAIEILELVN 369
Query: 213 GKLLSRAWGHTARIWNLKFFNDDTQLISVSEDCTCRVWNYKNDEL--------TIKDIFE 264
++ + H +W+++F D+ LIS S+D +VWN++ D+ T+KD
Sbjct: 370 NRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAEIQVWNWQLDKCIFLRGHQETVKDF-- 427
Query: 265 SHLTKNVWGVDVEETNLIAISGGNDGRLKVTELVPHNR 302
L K N +S DG +KV ++ N+
Sbjct: 428 -RLLK----------NSRLLSWSFDGTVKVWNIITGNK 454
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.321 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,895,519
Number of Sequences: 60738
Number of extensions: 2674445
Number of successful extensions: 9500
Number of sequences better than 1.0e-05: 136
Number of HSP's better than 0.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 8370
Number of HSP's gapped (non-prelim): 788
length of query: 990
length of database: 30,389,216
effective HSP length: 116
effective length of query: 874
effective length of database: 23,343,608
effective search space: 20402313392
effective search space used: 20402313392
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)