ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV5192 good L KOG3020 Replication, recombination and repair TatD-related DNase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV5192 1777217 1778560 448
(448 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBL055c [L] KOG3020 TatD-related DNase 318 1e-86
SPBC17A3.08 [L] KOG3020 TatD-related DNase 204 2e-52
7302323 [L] KOG3020 TatD-related DNase 149 8e-36
Hs14042943 [L] KOG3020 TatD-related DNase 147 2e-35
At3g52390 [L] KOG3020 TatD-related DNase 137 2e-32
Hs20473129 [L] KOG3020 TatD-related DNase 134 3e-31
ECU03g0200 [L] KOG3020 TatD-related DNase 104 3e-22
>YBL055c [L] KOG3020 TatD-related DNase
Length = 418
Score = 318 bits (814), Expect = 1e-86
Identities = 176/407 (43%), Positives = 240/407 (58%), Gaps = 41/407 (10%)
Query: 55 IRYFDIGFNISDHMFKGKYHGKKQHETDLSNILNRCRLTNVDKLLITGSSLEESRHSIKL 114
++Y+DIG N++D MF G Y+GK+ H D +L R +V L+TGSS+ ES+ +I+L
Sbjct: 36 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGSSIAESQSAIEL 95
Query: 115 CSEFATENGPKMMYTIGVHPCQVNEFMPKHSKSYRKSDSSEDLPF------------AIE 162
S + K+ +TIGVHPC VNEF K+ +S D P I
Sbjct: 96 VSSVKDLSPLKLYHTIGVHPCCVNEFADASQGD--KASASIDNPSMDEAYNESLYAKVIS 153
Query: 163 NHQFTKARLHELYDLWKLQAMTDNEHFRAIGEIGLDYDRFHFSGLEIQKFFFLEQLKLSC 222
N F + +L ELYDL QA + FR+IGEIGLDYDRFH+S E+QK FF EQLK+SC
Sbjct: 154 NPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSSKEMQKVFFEEQLKISC 213
Query: 223 F---FPDKPLFLHMRSCADDFLHILKLFINGFNDDKDLFGYKSWIDPSVPDSPILNTDGS 279
PLFLHMRS DDF+ IL+ FI GF D++D F + + + S
Sbjct: 214 LNDKLSSYPLFLHMRSACDDFVQILERFIAGFTDERDTFQLQK----------LGASSSS 263
Query: 280 VTYKFSAARKFVVHSFTGSVQDMEILLDCSQNCYFSVNGCSMRSEESIEMIKSLPVDKLL 339
YKF RK VVHSFTGS D++ LL+ S N + VNGCS+R+EE++ ++K +P ++LL
Sbjct: 264 GFYKFHPDRKLVVHSFTGSAIDLQKLLNLSPNIFIGVNGCSLRTEENLAVVKQIPTERLL 323
Query: 340 LETDAPWCDVRRTHASYRFLNQDADPKIENCWDHGLSAAYPTLDQWFKSVKKEKLQTIPR 399
LETDAPWC+++RTHAS+++L + + + YP FKSVKK KL
Sbjct: 324 LETDAPWCEIKRTHASFQYLAKYQEVR---------DFEYPA----FKSVKKNKLADKLN 370
Query: 400 EQWDLYMVKSRNEPCTMGHVATAVANIKQIPLIDLVDQVWHTSCLVY 446
+ +LYMVK RNEPC M VA V+ +K + L L+D W T+C ++
Sbjct: 371 AE-ELYMVKGRNEPCNMEQVAIVVSEVKDVDLATLIDTTWKTTCKIF 416
>SPBC17A3.08 [L] KOG3020 TatD-related DNase
Length = 312
Score = 204 bits (519), Expect = 2e-52
Identities = 127/395 (32%), Positives = 199/395 (50%), Gaps = 101/395 (25%)
Query: 52 LKQIRYFDIGFNISDHMFKGKYHGKKQHETDLSNILNRCRLTNVDKLLITGSSLEESRHS 111
+K +R++DIG+N +D +F+G YH K +H D +I++R + V+K++ITG ++E S +
Sbjct: 9 VKSLRFYDIGYNATDPVFRGIYHEKLKHPDDFDSIISRAKAVGVEKMMITGDNVENSEEA 68
Query: 112 IKLCSEFATENGPKMMYTIGVHPCQVNEFMPKHSKSYRKSDSSEDLPFAIENHQFTKARL 171
+ L + + T+GVHPCQ F+ R S+ ED
Sbjct: 69 LNLATNYECFTS-----TVGVHPCQAQCFL-------RHSEGPEDY-------------- 102
Query: 172 HELYDLWKLQAMTDNEHFR----AIGEIGLDYDRFHFSGLEIQKFFFLEQLKLSCFFPDK 227
L KL+A+ + A GE GLDYDR H++ ++QK +F EQLK++
Sbjct: 103 -----LVKLEALANKGKASGKVVAFGEFGLDYDRLHYAPADVQKMYFEEQLKVAVRV-QL 156
Query: 228 PLFLHMRSCADDFLHILKLFINGFNDDKDLFGYKSWIDPSVPDSPILNTDGSVTYKFSAA 287
PLFLH R+ +DF IL+ ++ P +P
Sbjct: 157 PLFLHSRNAENDFFAILEKYL-----------------PELP------------------ 181
Query: 288 RKFVVHSFTGSVQDMEILLDCSQNCYFSVNGCSMRSEESIEMIKSLPVDKLLLETDAPWC 347
+K VVHSFTGS+ +M ++ Y VNGCS+++EE++E+++++P++K+LLETDAPWC
Sbjct: 182 KKGVVHSFTGSIDEMRRCIE--HGLYVGVNGCSLKTEENLEVVRAIPLEKMLLETDAPWC 239
Query: 348 DVRRTHASYRFLNQDADPKIENCWDHGLSAAYPTLDQWFKSVKKEKLQTIPREQWDLYMV 407
+VR +HA ++FL F S KKE+ + + M+
Sbjct: 240 EVRPSHAGHQFLKTKLP---------------------FDSCKKERFK-------EGCMI 271
Query: 408 KSRNEPCTMGHVATAVANIKQIPLIDLVDQVWHTS 442
+ RNEPC VA VA +K I L +L +Q+W S
Sbjct: 272 RGRNEPCNTYIVAEIVAALKDISLEELSEQIWENS 306
>7302323 [L] KOG3020 TatD-related DNase
Length = 291
Score = 149 bits (376), Expect = 8e-36
Identities = 103/364 (28%), Positives = 165/364 (45%), Gaps = 98/364 (26%)
Query: 68 MFKGKYHGKKQHETDLSNILNRCRLTNVDKLLITGSSLEESRHSIKLCSEFATENGPKMM 127
MF+G Y G ++HE DL +L R + K+++T L++ +++L S+ ++
Sbjct: 1 MFQGCYGGTQKHEPDLHIVLERAWQQGLQKVIVTAGCLKDVDEALELASK-----DERIY 55
Query: 128 YTIGVHPCQVNEFMPKHSKSYRKSDSSEDLPFAIENHQFTKARLHELYDLWKLQAMTDNE 187
T+G HP + EF+P + Y YD + + +
Sbjct: 56 TTVGTHPTRCEEFVPD-PEGY--------------------------YDQLRSRIKANRT 88
Query: 188 HFRAIGEIGLDYDRFHFSGLEIQKFFFLEQLKLSCFFPDKPLFLHMRSCADDFLHILKLF 247
RA+GE GLDYDR HF E Q+ +F +QL L+ F PLFLHMR+ A+DF+ IL+
Sbjct: 89 KVRAVGECGLDYDRLHFCAQETQRLYFEKQLDLAAEFK-LPLFLHMRNAAEDFMGILERN 147
Query: 248 INGFNDDKDLFGYKSWIDPSVPDSPILNTDGSVTYKFSAARKFVVHSFTGSVQDMEILLD 307
N K VVHSFTG++++ + +L
Sbjct: 148 RN---------------------------------KIEECGGGVVHSFTGTLEEAQRILA 174
Query: 308 CSQNCYFSVNGCSMRSEESIEMIKSLPVDKLLLETDAPWCDVRRTHASYRFLNQDADPKI 367
Y NGCS++++E+ E+++ LP D+++LETD PWC +R +HA ++ +
Sbjct: 175 FG-GLYIGFNGCSLKTDENAEVVRKLPNDRIMLETDCPWCGIRPSHAGHKHVTTK----- 228
Query: 368 ENCWDHGLSAAYPTLDQWFKSVKKEKLQTIPREQWDL-YMVKSRNEPCTMGHVATAVANI 426
F +VKK +E+W ++ R EPC + V ++A I
Sbjct: 229 ------------------FPTVKK-------KEKWTAESLIDGRCEPCQISQVLESIAGI 263
Query: 427 KQIP 430
KQ P
Sbjct: 264 KQEP 267
>Hs14042943 [L] KOG3020 TatD-related DNase
Length = 297
Score = 147 bits (372), Expect = 2e-35
Identities = 107/395 (27%), Positives = 180/395 (45%), Gaps = 102/395 (25%)
Query: 52 LKQIRYFDIGFNISDHMFKGKYHGKKQHETDLSNILNRCRLTNVDKLLITGSSLEESRHS 111
+ + ++ DIG N++D MF+G Y G ++H+ DL +++ R V K +ITG +L++S+ +
Sbjct: 1 MSRFKFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDA 60
Query: 112 IKLCSEFATENGPKMMYTIGVHPCQVNEFMPKHSKSYRKSDSSEDLPFAIENHQFTKARL 171
+ L A NG T+G HP + EF + Y K
Sbjct: 61 LHL----AQTNG-MFFSTVGCHPTRCGEFEKNNPDLYLK--------------------- 94
Query: 172 HELYDLWKLQAMTDNEHFRAIGEIGLDYDRFHFSGLEIQKFFFLEQLKLSCFFPDKPLFL 231
EL +L A + AIGE GLD+DR F + Q +F +Q +LS P+FL
Sbjct: 95 -ELLNL----AENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELS-EQTKLPMFL 148
Query: 232 HMRSCADDFLHILKLFINGFNDDKDLFGYKSWIDPSVPDSPILNTDGSVTYKFSAARKFV 291
H R+ +FL I+K N D+ + G V
Sbjct: 149 HCRNSHAEFLDIMKR-----NRDRCVGG-------------------------------V 172
Query: 292 VHSFTGSVQDMEILLDCSQNCYFSVNGCSMRSEESIEMIKSLPVDKLLLETDAPWCDVRR 351
VHSF G+ + L+D + Y NGCS+++E ++E++KS+P +KL++ETDAPWC V+
Sbjct: 173 VHSFDGTKEAAAALIDL--DLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKS 230
Query: 352 THASYRFLNQDADPKIENCWDHGLSAAYPTLDQWFKSVKKEKLQTIPREQWDLYMVKSRN 411
THA +++ A+PT +W + +K RN
Sbjct: 231 THAGSKYIR----------------TAFPTKKKWESG----------------HCLKDRN 258
Query: 412 EPCTMGHVATAVANIKQIPLIDLVDQVWHTSCLVY 446
EPC + + ++ ++ ++L + +++ + V+
Sbjct: 259 EPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVF 293
>At3g52390 [L] KOG3020 TatD-related DNase
Length = 299
Score = 137 bits (346), Expect = 2e-32
Identities = 104/346 (30%), Positives = 160/346 (46%), Gaps = 97/346 (28%)
Query: 99 LITGSSLEESRHSIKLCSEFATENGPKMMYTIGVHPCQVNEFMPKHSKSYRKSDSSEDLP 158
++TG SLEESR ++ + E ++ T+GVHP + NEF
Sbjct: 34 IVTGGSLEESREALAIA-----ETDGRLFCTVGVHPTRCNEF------------------ 70
Query: 159 FAIENHQFTKARLHELYDLWKLQAMTDNEHFRAIGEIGLDYDRFHFSGLEIQKFFFLEQL 218
E + L+ L K + M + AIGE GLDYDR F ++IQK +F +Q
Sbjct: 71 ---EESGDPEKHYQALFSLAK-EGMQKGKVV-AIGECGLDYDRLQFCSVDIQKKYFEKQF 125
Query: 219 KLSCFFPDKPLFLHMRSCADDFLHILKLFINGFNDDKDLFGYKSWIDPSVPDSPILNTDG 278
+L+ + P+FLHMR+ A+DF I++ N F T G
Sbjct: 126 ELA-YATKLPMFLHMRAAAEDFCEIVERNKNRF------------------------TGG 160
Query: 279 SVTYKFSAARKFVVHSFTGSVQDMEILLDCSQNCYFSVNGCSMRSEESIEMIKSLPVDKL 338
V HSFTGS D + LL + Y VNGCS+++ E++E++K +PV+++
Sbjct: 161 ------------VAHSFTGSASDRDKLLSFDK-MYLGVNGCSLKTAENLEVMKGIPVERM 207
Query: 339 LLETDAPWCDVRRTHASYRFLNQDADPKIENCWDHGLSAAYPTLDQWFKSVKKEKLQTIP 398
++ETD+P+CD++ THA +F +++ W S KKEK
Sbjct: 208 MIETDSPYCDIKNTHAGIKF--------VKSTW---------------PSKKKEKYD--- 241
Query: 399 REQWDLYMVKSRNEPCTMGHVATAVANIKQIPLIDLVDQ-VWHTSC 443
+VK RNEPC + V VA K + ++ V ++H +C
Sbjct: 242 ----QESLVKGRNEPCLVRQVLEVVAGYKGLGDLNQVSSTLYHNTC 283
>Hs20473129 [L] KOG3020 TatD-related DNase
Length = 297
Score = 134 bits (337), Expect = 3e-31
Identities = 99/395 (25%), Positives = 173/395 (43%), Gaps = 102/395 (25%)
Query: 52 LKQIRYFDIGFNISDHMFKGKYHGKKQHETDLSNILNRCRLTNVDKLLITGSSLEESRHS 111
+ ++ DI N++D MF+G Y G ++H+ DL ++ R V K +ITG +L++S+ +
Sbjct: 1 MSHFKFIDIVINLTDTMFRGIYRGVQKHQDDLQDVTGRAVEIGVKKFMITGGNLQDSKDA 60
Query: 112 IKLCSEFATENGPKMMYTIGVHPCQVNEFMPKHSKSYRKSDSSEDLPFAIENHQFTKARL 171
+ L + T G HP + +F + Y K + D EN++
Sbjct: 61 LHLA-----QTNHMFFSTAGCHPTRCGKFEKNNPDLYLKELLNLD-----ENNKGKVV-- 108
Query: 172 HELYDLWKLQAMTDNEHFRAIGEIGLDYDRFHFSGLEIQKFFFLEQLKLSCFFPDKPLFL 231
A+GE GLD+DR HF + Q + +Q +LS P+FL
Sbjct: 109 -------------------AVGECGLDFDRLHFCPKDTQLKYCEKQFELS-EQTKLPMFL 148
Query: 232 HMRSCADDFLHILKLFINGFNDDKDLFGYKSWIDPSVPDSPILNTDGSVTYKFSAARKFV 291
H R+ +FL I+K N D+ + G V
Sbjct: 149 HCRNSHAEFLDIIKR-----NRDRCVEG-------------------------------V 172
Query: 292 VHSFTGSVQDMEILLDCSQNCYFSVNGCSMRSEESIEMIKSLPVDKLLLETDAPWCDVRR 351
VHSF G+ + L+D + Y NGCS+++E ++E++KS+P +KL++ETDAPWC V+
Sbjct: 173 VHSFDGTKEAAAALIDL--DLYIGFNGCSLKTETNLEVLKSIPSEKLMIETDAPWCGVKS 230
Query: 352 THASYRFLNQDADPKIENCWDHGLSAAYPTLDQWFKSVKKEKLQTIPREQWDLYMVKSRN 411
THA ++ + A+PT +W + +K RN
Sbjct: 231 THAGSKY----------------IKTAFPTKKKWESG----------------HCLKDRN 258
Query: 412 EPCTMGHVATAVANIKQIPLIDLVDQVWHTSCLVY 446
EPC + + ++ ++ ++ + +++ + V+
Sbjct: 259 EPCHIIQILEIMSAVRDEDPLESANTLYNNTIKVF 293
>ECU03g0200 [L] KOG3020 TatD-related DNase
Length = 273
Score = 104 bits (259), Expect = 3e-22
Identities = 84/307 (27%), Positives = 135/307 (43%), Gaps = 99/307 (32%)
Query: 59 DIGFNISDHMFKGKYHGKKQHETDLSNILNRCRLTNVDKLLITGSSLEESRHSIKLCSEF 118
DI NI+D + + E+ + ++ RC+ + V + TG + S+ I L ++
Sbjct: 4 DIAVNITDKLLA-------KDESSVEEVIRRCKDSKVLPIF-TGLDHQTSKICINLAKKY 55
Query: 119 ATENGPKMMYTIGVHPCQVNEFMPKHSKSYRKSDSSEDLPFAIENHQFTKARLHELYDLW 178
T + T G+HP + S R S+ E +P
Sbjct: 56 KTVS------TAGIHP----------TSSSRYSNIDEIVP-------------------- 79
Query: 179 KLQAMTDNEHFRAIGEIGLDYDRFHFSGLEIQKFFFLEQLKL--SCFFPDKPLFLHMRSC 236
+ ++E AIGE GLDYDR F+ QK F QL L SC+F H RSC
Sbjct: 80 ----LVNDETVVAIGECGLDYDRLEFADKVSQKRIFRSQLDLGGSCYF------FHSRSC 129
Query: 237 ADDFLHILKLF-INGFNDDKDLFGYKSWIDPSVPDSPILNTDGSVTYKFSAARKFVVHSF 295
DF+ I+ + I G VVHSF
Sbjct: 130 HRDFMEIVSDYRIRG----------------------------------------VVHSF 149
Query: 296 TGSVQDMEILLDCSQNCYFSVNGCSMRSEESIEMIKSLPVDKLLLETDAPWCDVRRTHAS 355
TGS+++ L+ + + +NGCS+++ E IE+++SLP++ LL+ETD+P+C +RR++A
Sbjct: 150 TGSIEEARELI--KKGLFIGINGCSVKTLEGIEIVRSLPLESLLIETDSPYCKIRRSYAG 207
Query: 356 YRFLNQD 362
+ ++ D
Sbjct: 208 FEYVTTD 214
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.324 0.138 0.431
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,919,716
Number of Sequences: 60738
Number of extensions: 1215497
Number of successful extensions: 3515
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3473
Number of HSP's gapped (non-prelim): 17
length of query: 448
length of database: 30,389,216
effective HSP length: 110
effective length of query: 338
effective length of database: 23,708,036
effective search space: 8013316168
effective search space used: 8013316168
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)