ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV5239 good D KOG3694 Cell cycle control, cell division, chromosome partitioning Protein required for meiosis
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV5239 1793664 1789711 -1318
(1318 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER093c [D] KOG3694 Protein required for meiosis 848 0.0
SPBC12C2.02c [D] KOG3694 Protein required for meiosis 263 1e-69
7293569 [D] KOG3694 Protein required for meiosis 97 2e-19
Hs22047806 [D] KOG3694 Protein required for meiosis 65 7e-10
CE23689_1 [D] KOG3694 Protein required for meiosis 55 1e-06
>YER093c [D] KOG3694 Protein required for meiosis
Length = 1430
Score = 848 bits (2191), Expect = 0.0
Identities = 513/1409 (36%), Positives = 821/1409 (57%), Gaps = 138/1409 (9%)
Query: 13 SRSNTNGTSNVPKRQNLVLSTSFVSTRRFDDGVPVPTSPLLTKHRSSTIN----TLKSEI 68
S S S+ +QNLVLSTSF+ST+R ++ P PTSPL+ + ST+ LK+EI
Sbjct: 50 SPSTITNESSKRNKQNLVLSTSFISTKRLENSAPSPTSPLMARRTRSTMTKALLNLKAEI 109
Query: 69 TQLEQEIDRQRKRKVDHARLKKSSNSNDIYVDKYSTNHLENHSMRLRANSEIRDIEINIX 128
QE+ R RK+K D L+ S+ S DIY YSTNHL+ HSMR+RAN+++R+I+ +I
Sbjct: 110 NNQYQELARLRKKKDDIEHLRDSTIS-DIYSGSYSTNHLQKHSMRIRANTQLREIDNSIK 168
Query: 129 XXXXXXXXXXXXXXXSEAGAGDLITPSK------PIQNINAQSNESIXXXXXXXXXXXXX 182
+ L T S I+N + Q+N+S
Sbjct: 169 RVEKHIFDLKQQFDKKRQRS--LTTSSSIKADVGSIRNDDGQNNDSEELGDHDSLTDQVT 226
Query: 183 XXIGHRLTPTK---------------------------SIPTL-----VFQSDDMDHSSE 210
+ TPT SIP L V + D +
Sbjct: 227 LDDEYLTTPTSGTERNSQQNLNRNSTVNSRNNENHSTLSIPDLDGSNKVNLTGDTEKDLG 286
Query: 211 HL-SMNMLYESPTKETATWLISDHLQSLQDINASVDFILQKANGLVILLHKNPEIKEDLV 269
L + N ++ S T E ATWL+SD++QS Q+ N + DFI QKANGLV LL ++ EI++DLV
Sbjct: 287 DLENENQIFTSTTTEAATWLVSDYMQSFQEKNVNPDFIAQKANGLVTLLKEHSEIRKDLV 346
Query: 270 ITAFASTIQNLLLNSNQKIRSAGYRIVRYLILNENTIDFMTKLHIDVFITMSLGKDKAHQ 329
+T+F S+IQNLLLN N+ I ++ YR+ RYLI + ID + +L +D FI +SL KD + Q
Sbjct: 347 LTSFMSSIQNLLLNGNKLIAASAYRVCRYLINSSIFIDELLELRLDAFIIISLAKDNSFQ 406
Query: 330 EEREQALKLTRRFIDFNAYGINKSITQAVVSCVELQDDALRIVAFETLIELTFIKPELID 389
EREQALK+ RRFI++N G+ + I QA++SCVE +D+LR +A ETL+EL F+ PE++
Sbjct: 407 IEREQALKMVRRFIEYNN-GVTQGIMQAIISCVEKPEDSLRHMALETLLELCFVAPEMVK 465
Query: 390 ECRAFPIIQAFILDPNTKN-EELAISSMIEMLSYPQIRPYFIKNFHTGNLLSGFSDYQTK 448
ECR +I+ F+ D + + + + +++++++ + R +F+++F+ L + FSD TK
Sbjct: 466 ECRGMRVIEGFLQDYTSFSLASVILDTILQLMATHKTRQHFLEDFNVSVLTTVFSDTNTK 525
Query: 449 LTGSLDKVQRSVRVIVRILQDFNGLLLFALNDCQLLKQLIAFAQSPSLFKYIMNIFMISL 508
+++K+Q + +I L +NG +LF+ N+ + LKQL++F Q P +Y+++IF+ L
Sbjct: 526 SNVNVEKMQNASTLISITLNSYNGFMLFSNNNFKPLKQLVSFFQIPICAQYLIDIFLDVL 585
Query: 509 RIK--------------RNIPEKI--DCSQIDQYVYLLISMMNNADFVNKIMKYSLAALP 552
+IK + IP + +C ++Q + L++ ++ N++FV +++
Sbjct: 586 KIKPLPYKPRGRHSHSFKPIPSQYYKECMSVNQRLALIVLILENSEFVPHLLEL------ 639
Query: 553 KLDSSTRDNT-----RLILAKNFDASMHLTTVITKFNNLKFPEKLDQYKLFHETFVFNNA 607
L+ RD+ R +L + F+ M+L V K+ ++ P + + +ETF F
Sbjct: 640 -LNEEDRDDHLVAKGRYLLTEYFNLRMNL--VDKKYTSVSKPIYKENFTYVNETFQFKKI 696
Query: 608 VYSTRSKLATTN------TQKMMLKSAGVMQLNSSKKNIDDVGFKKMVFDSKVLQTKNFS 661
Y T Q + S + + N+ + +DD F++MV+DSKVLQTK+F+
Sbjct: 697 AYKMNRNRNTIGMSGIDYAQNIKSFSKNIKE-NTLLREVDDFRFRRMVYDSKVLQTKDFT 755
Query: 662 FWNWQVIGELCKSPLMNKKRLDELAKSTRFVRRMLVFYRPFRFRFTSVSLKDPMANTYVE 721
WNW +I EL + PL+NKK+L+EL KST+F+RR+LVFYRP R RF++V+ ++ YV+
Sbjct: 756 RWNWNIINELLEGPLLNKKQLEELVKSTKFIRRLLVFYRPLRLRFSNVNKGAKLSQKYVQ 815
Query: 722 VGCLFFRMLLSSNVGTKILADDTKLIPQIASVLYNNIQGHFVSDMLFTENALNEKLCSGY 781
VGC FF+ L ++ G KIL DDTK+IPQ+AS+++ ++G+ +S +F +N L EK+ GY
Sbjct: 816 VGCQFFKTLTATPEGMKILMDDTKIIPQLASLMFRAMEGN-ISGNIFNKNKLREKIIFGY 874
Query: 782 FKIIFGVFTENSSGMSFLEKWNVFTVINNMFSKKSSISIKYLMLALPELNFRF-SRCKMF 840
FK I G+ T++ +G+ L +WN FTVI MF +S + +++L+L +PEL+ ++ S C++
Sbjct: 875 FKFI-GILTQSKNGVHILTRWNFFTVIYKMFQFESKLGLEFLLLTIPELDLKYSSHCRVI 933
Query: 841 LNKALLDDREAIRILATETLGEKLQ----------SLEEDEVKLEAYFIQLTCRQLYDLA 890
+ KAL+ E +RI AT+ +G+KL+ L+ ++VKL+ + +++ RQLYDL+
Sbjct: 934 IGKALVVANEKVRIEATKHIGDKLKELLSTKESDLKLKANKVKLQQFKMEMLTRQLYDLS 993
Query: 891 PTVVAIADKILYDYCSTNVHPTKILQSSIKNCLDQLIFIGSPTLLKLMETSEGFQQLRGL 950
P+VVA+AD+ LY+ C + ++ L +S + L+Q++FI SP L +L+ GFQ L +
Sbjct: 994 PSVVAVADQALYE-CIVAGNGSEELGTSFRMFLNQMVFIRSPILFELLSRPYGFQLLNEI 1052
Query: 951 NYTNKERINWKTFKNREFVFKVEQFLEQEISKPEST----SKRSFPLHFYQYLCKSEEGA 1006
N+ +ER +W + KN E+V VE+FL++ S + K PLHFY+ L K+E+G
Sbjct: 1053 NFVKEERDSWLSKKNIEYVHIVEEFLKKNESINAKSLTFQQKSRLPLHFYESLTKTEDGI 1112
Query: 1007 NLLSKSDDIKDFVTVIKKHIINEQTDNDPPHSEEGIIKLTSCMWACGFIGATDYGINLLD 1066
LLS++ D+ F+ VIKK+ +N +++E I+ L + +W GFIG+T+ GI LLD
Sbjct: 1113 LLLSQTGDLVTFMNVIKKY-VNGNNMATVENAKE-ILDLKAALWCVGFIGSTELGIGLLD 1170
Query: 1067 KYSFVQDIVELANESQYTSIKNTAFYVLGLVSYTMEGREMLEEVGWESIMDTRGMPIGVC 1126
YS V+DI+E+A + TS++ TAFYVLGL+S T EG E+L+E+GW + + PIG+
Sbjct: 1171 NYSLVEDIIEVAYNASVTSVRFTAFYVLGLISMTREGCEILDEMGWNCCVSVQDEPIGIA 1230
Query: 1127 VPKNADTLLHWSDLGPIKIPPGDIQIEWDEVNEHNQNAASICNNELNSNIIVG--DHEIP 1184
+P D L ++ + +W E++ I N+ + ++I E
Sbjct: 1231 LPNRLDRFLSYN------------EHKWSAFGEYSDE--MIVFNKSDGDLIEKCLPIEFD 1276
Query: 1185 LDNLLEWERSETSVNPDQQEEDKQELERAIREISQTNESKLPDVF--------------- 1229
LD LL + +T+ NP ++ + + I + T + +F
Sbjct: 1277 LDKLL--KEKDTAENPLNEKIITNKYDNDITSQTITVSGENSSLFANEGLSSPYVTQYRN 1334
Query: 1230 EDDKINNRILRIVSDMGNNILLNGAIKEITALQSKYGPSRFQSPEMFEQVYELLGEYRFK 1289
+DD I +++L IVS +GN+IL N A+KEIT + +KYGP F++ +MF +V+ ++ +YRFK
Sbjct: 1335 DDDSIESKVLHIVSQLGNHILSNHAVKEITEINNKYGPRLFENEKMFFKVFNMMSKYRFK 1394
Query: 1290 PSVRKFLLELFINTRAVENMIRNERRRKR 1318
P VRKFL LFIN RA+EN+IR++ +R +
Sbjct: 1395 PHVRKFLCGLFINNRALENVIRHDNKRDK 1423
>SPBC12C2.02c [D] KOG3694 Protein required for meiosis
Length = 1309
Score = 263 bits (673), Expect = 1e-69
Identities = 167/508 (32%), Positives = 279/508 (54%), Gaps = 28/508 (5%)
Query: 640 IDDVGFKKMVFDSKVLQTKNFSFWNWQVIGELCKSPLMNKKRLDELAKSTRFVRRMLVFY 699
IDD F+ M+ ++ VL TKN+ W W + ++ + PL++ KR+DE ++T+F+RR+L FY
Sbjct: 696 IDDSHFRSMLAETNVLATKNYQKWRWDTLVQIMEGPLLSPKRIDETLRTTKFMRRLLAFY 755
Query: 700 RPFRFRFTSVSLKDPMANTYVEVGCLFFRMLLSSNVGTKILADDTKLIPQIASVLYNNIQ 759
+PF RF+S+ P +++VGCL FR LL++ G K L++ +K+I QIA L + I
Sbjct: 756 KPFSNRFSSIQNTKPNQK-FIKVGCLVFRTLLANPEGVKYLSE-SKVIKQIAESL-SQID 812
Query: 760 GHF--VSDMLFTENALNEKLCSGYFKIIFGVFTENSSGMSFLEKWNVFTVINNMFSKKSS 817
G+ VS+ +F+ + L + L GYF ++ V + G + +E+W +FT + ++ ++
Sbjct: 813 GYSEQVSEPIFSNSRLQKTLTHGYFPML-KVLSSQKEGHAIMERWRIFTTLYHLTELRNR 871
Query: 818 ISIKYLMLALPELNFRFS-RCKMFLNKALLDDREAIRILATETLGEKLQSLEEDEVKLEA 876
+ +++ L L++R ++ +KAL ++A+R+ AT+ L + S E L
Sbjct: 872 DDL--IIIFLTNLDYRLEGHTRIIFSKALNTGQQAVRLTATKHLAALINS-ESANDNLNH 928
Query: 877 YFIQLTCRQLYDLAPTVVAIADKILYDYCSTNVHP-TKILQSSIKNCLDQLIFIGSPTLL 935
+ I L QLYD V A K+L + C+ N + +++Q ++ L L IGSP LL
Sbjct: 929 WAISLLIFQLYDPCLEVCKTAVKVLNEVCARNENLLAQVVQ--LQPSLAHLGEIGSPLLL 986
Query: 936 KLMETSEGFQQLRGLNYTNKERINWKTFKNREFVFKVEQ-FLEQEISKPESTSKRS---- 990
+ + T+ GF L +N+ E NW +N ++V +EQ F +S + K++
Sbjct: 987 RFLATTVGFHYLSEINFIEHELDNWYHHRNIDYVDLLEQNFFLSFVSNLKIIDKKNNEPD 1046
Query: 991 ---FPLHFYQYLCKSEEGANLLSKSDDIKDFVTVIKKHIINEQTDNDPPHSEEGIIKLTS 1047
PLHFY L KS +G +L S + F+ + + D P E I +L S
Sbjct: 1047 ENILPLHFYGELVKSPQGCEVLESSGHFESFMGTLVEFY-------DKPLGNEAIRQLKS 1099
Query: 1048 CMWACGFIGATDYGINLLDKYSFVQDIVELANESQYTSIKNTAFYVLGLVSYTMEGREML 1107
+WA G IG TD GI L + + IV+ A S +++ TA++VLGL+S T +G E+L
Sbjct: 1100 ALWAIGNIGKTDQGITFLINHDTIPLIVKYAENSLIPTVRGTAYFVLGLISRTSKGVEIL 1159
Query: 1108 EEVGWESIMDTRGMPIGVCVPKNADTLL 1135
E + W S+M G G+C+P++A +L
Sbjct: 1160 ESLHWYSLMSLMGTSQGICIPRHAGQVL 1187
Score = 82.0 bits (201), Expect = 6e-15
Identities = 69/274 (25%), Positives = 134/274 (48%), Gaps = 20/274 (7%)
Query: 240 INASVDFILQKANGLVILLHKNPEIKEDLVITAFASTIQNLLLNSNQKIRSAGYRIVRYL 299
+ S+ ++ +N L LH++ + + TI ++L + ++ ++ YR++R+L
Sbjct: 226 LEGSMKDVIDSSNNLCEYLHEHSDPAYAKNFSLITPTILSMLELNVSEVTASVYRLLRHL 285
Query: 300 ILNENTIDFMTKLHIDVFITMSL--GKDKAHQEEREQALKLTRRFIDFNAYGINKS---- 353
L+ L++ ++ SL G D A+Q EREQA +L R ++ ++
Sbjct: 286 FLDATAFSCCQMLNLPWILSKSLLSGTD-AYQIEREQAFRLIRTLYFLSSTEGHEDYLSG 344
Query: 354 ITQAVVSCVELQDDALRIVAFETLIELTFIKPELIDECRAFPIIQAFILDPNTKNEELAI 413
IT+ ++S E D R +A ETLIEL I+P+++ + ++ ++D + +E LA
Sbjct: 345 ITRTIISICEHVSDVSRGIAVETLIELMIIRPKILFKANGLRVLMISLID-GSISENLAA 403
Query: 414 S---SMIEMLSYPQIRPYFIKNFHTGNLLSGFSDYQTKLTGSLDKVQ---------RSVR 461
S +++ +L P+ Y + G LLS F+ ++ T + + Q S +
Sbjct: 404 SAALALVYLLDDPESACYVNLPYDIGILLSPFTSSSSRDTFNSSEEQSEQAAKAMKSSAK 463
Query: 462 VIVRILQDFNGLLLFALNDCQLLKQLIAFAQSPS 495
V +L ++GLL + ND Q L+ ++ + PS
Sbjct: 464 VASVLLNSWSGLLALSTNDFQALRSIVDTLRVPS 497
>7293569 [D] KOG3694 Protein required for meiosis
Length = 1922
Score = 96.7 bits (239), Expect = 2e-19
Identities = 109/498 (21%), Positives = 204/498 (40%), Gaps = 58/498 (11%)
Query: 645 FKKMVFDSKVLQTKNFSFWNWQVIGELCKSPLMNKKRLDELAKSTRFVRRMLVFYRPFRF 704
F +++ DS+VL + W+W VI + KS L+ K LD +F++R++ FY+P
Sbjct: 571 FNRLLTDSRVLSQADAHLWDWDVITTILKSNLIRK--LD--YTQGKFLKRLVDFYKPRNN 626
Query: 705 RFTSVSL-KDPMANTYVEVGCLFFRMLLSSN--VGTKILADDTKLIPQIASVLYNNIQGH 761
RF+ L TYV G +LLSSN + + D I Q + + + + H
Sbjct: 627 RFSHQDLVPGQRLPTYVSAGLDLIDVLLSSNELECMRFITDYFSDISQQLAAVTTSNRAH 686
Query: 762 FVSDMLFTENALNEKLCSGYFKIIFGVFTENSSGMSFLEKWNVFTVINNMFSKKSSISIK 821
D LF+ +N +C YF + G G+ L+ VF + N+ + + +
Sbjct: 687 ---DCLFSPQHMNNTMCQQYF-LYIGRMCRTVKGIEVLKNTTVFEYLINLV--RVTDHVC 740
Query: 822 YLMLALPELNFRFSRC-KMFLNKALLDDREAIRILATETLGEKLQSLEEDEVKLEAYFIQ 880
Y+ L + LN+ + + + L KAL + R+ +T+ + L++ E + I
Sbjct: 741 YVKLIVSGLNYSYEKLPRQVLEKALTSAKTRGRLYSTQFMAVLLRARLP---HFEVWGIP 797
Query: 881 LTCRQLYDLAPTVVAIADKILYDYCSTNVHPTKILQSSIKNCLDQLIFIGSPTLLKLMET 940
L Q D +V A +L + C + +I+ L G L +
Sbjct: 798 LIINQTRDSDRSVGLAAMDVLEEACHDKYYLEEIVSR-----WPNLTHRGDAGRLLM--- 849
Query: 941 SEGFQQLRGLNYT----NKERINWKTFKNREFVFKVEQFLEQEIS--------------- 981
+ + RGLN T E W+ N+ +V VE ++
Sbjct: 850 ARYYSLPRGLNSTMARIEDEIRYWRNGYNKRYVLLVEADTHSSLTLHIRNEDGYYSRRNC 909
Query: 982 --KPESTSKRSFPLHFYQYLCKSEEGANLLSKSDDIKDFVTVIKKHIINEQTDNDPPHSE 1039
+P++ P H Y + ++ +G L K D+ + ++++ + +
Sbjct: 910 NQRPQTVPPNVAP-HLYGQMAQTGQGMTALRKHGDLPQLLELLRRAKCTDDAE------- 961
Query: 1040 EGIIKLTSCMWACGFIGATDYGINLLDKYS--FVQDIVELANESQYTSIKNTAFYVLGLV 1097
++L + +WA GI + + + ++ L + + S++ T F LGL+
Sbjct: 962 --CLELKAAIWALAHASTHSNGIEYFVELNARLYEKLIVLVTKCEVYSVRATCFSALGLI 1019
Query: 1098 SYTMEGREMLEEVGWESI 1115
+ T G +L ++ W S+
Sbjct: 1020 AGTQAGANILFKLNWLSV 1037
Score = 54.3 bits (129), Expect = 1e-06
Identities = 40/151 (26%), Positives = 70/151 (45%), Gaps = 6/151 (3%)
Query: 281 LLNSNQKIRSAGYRIVRYLILNENTIDFMTKLHIDVFITMSLGKDKAHQEEREQALKLTR 340
L+++ ++R+A R +RY I N I L + + S+ + +ER QALKL R
Sbjct: 83 LVHTFTQVRAAALRTIRYAISTPNDIKTFNALQLQHLLCRSIDLMLKNDDERVQALKLVR 142
Query: 341 RFIDFNAYGINKSITQAVVSC----VELQDDALRIVAFETLIELTFIKPELIDECRAFPI 396
+ + I+ ++ + +VS +E D+ LR TL E + P L+ C
Sbjct: 143 KMLAIAPEDISPAVVRCLVSLADSGIEENDNLLR-ACLATLAEFAVLNPALLIVCGGVTS 201
Query: 397 IQAFILD-PNTKNEELAISSMIEMLSYPQIR 426
I +L+ N + E ++ +L +PQ R
Sbjct: 202 ITRNVLECHNPRIAESLCGVLLYLLEWPQTR 232
>Hs22047806 [D] KOG3694 Protein required for meiosis
Length = 265
Score = 65.1 bits (157), Expect = 7e-10
Identities = 45/167 (26%), Positives = 88/167 (51%), Gaps = 9/167 (5%)
Query: 266 EDLVITAFASTIQNLLLNSNQKIRSAGYRIVRYLILNENTIDFMTKLHIDVFITMSLGKD 325
ED++I ++ LLN +++R+AG R +RYLI + + + + KL +D I +
Sbjct: 82 EDIIIC-----LRLALLNEAKEVRAAGLRALRYLIQDSSILQKVLKLKVDYLIARCIDIQ 136
Query: 326 KAHQEEREQALKLTRRFIDFNAYGINKSITQAVVSCVE--LQD-DALRIVAFETLIELTF 382
++++ ER QAL+L R+ I NA S+T ++++ LQ+ D + + EL
Sbjct: 137 QSNEVERTQALRLVRKMITVNASLFPSSVTNSLIAVGNDGLQERDRMVRACIAIICELAL 196
Query: 383 IKPELIDECRAFPIIQAFILDPN-TKNEELAISSMIEMLSYPQIRPY 428
PE++ I ++D ++ E I++++ +L++P+ R Y
Sbjct: 197 QNPEVVALRGGLNTILKNVIDCQLSRINEALITTILHLLNHPKTRQY 243
>CE23689_1 [D] KOG3694 Protein required for meiosis
Length = 314
Score = 54.7 bits (130), Expect = 1e-06
Identities = 69/293 (23%), Positives = 126/293 (42%), Gaps = 41/293 (13%)
Query: 838 KMFLNKALLDDREAIRILATETLGEKLQSLEEDEVKLEAYFIQLTCRQLYDLAPTVVAIA 897
++ + KAL EA R T L L S D + IQ RQL D + VV
Sbjct: 3 RVIIGKALTSTSEASRKWTTRYLAV-LASF--DLPTFSDWGIQYMLRQLADESSKVVRHT 59
Query: 898 DKILYDYCSTNVHPTKILQSSIKNCLDQLIFIGSPTLLKL------METSEGFQQLRG-- 949
+IL + HP++ L+ +D +F + LL+ E + ++R
Sbjct: 60 IRILNRWLPE--HPSRNLRK-----IDWSLFGEAGDLLRAHVFAMESECASDEDEVRDVV 112
Query: 950 ---LNYTNKERINWKTFKNREFVFKVEQFLEQEISK-----PESTSKRSFPLHFYQYLCK 1001
++ NK+ +N + +E +F V++ ++ S+ P+++ PLH + L
Sbjct: 113 RFWMSDFNKKYLNIIDEEMKEMMFHVKRSIDGSFSRSSSDIPDTSLGVQAPLHLFAALGS 172
Query: 1002 SEEGANLLSKSDDIKDFVTVIKKHIINEQTDNDPPHSEEGIIKLTSCMWACGFIGATDYG 1061
E G ++L + +D +++ K E+ + + + A IG+TD G
Sbjct: 173 HETGRHILIDENVAEDLLSICKTGKCFEE--------------IKASLLAVSSIGSTDGG 218
Query: 1062 INLLDKYSFVQDIVELANESQYTSIKNTAFYVLGLVSYTMEGREMLEEVGWES 1114
+L + V ++++A E +++ AF+ L S +EG + L GWES
Sbjct: 219 FEILPADA-VPVVIKIAEEHPVLTVRGIAFWALCTFSQCIEGAKRLGSFGWES 270
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.135 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,178,654
Number of Sequences: 60738
Number of extensions: 3086970
Number of successful extensions: 9896
Number of sequences better than 1.0e-05: 5
Number of HSP's better than 0.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 9858
Number of HSP's gapped (non-prelim): 12
length of query: 1318
length of database: 30,389,216
effective HSP length: 118
effective length of query: 1200
effective length of database: 23,222,132
effective search space: 27866558400
effective search space used: 27866558400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)