ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV5368 good YU KOG1900 Intracellular trafficking, secretion, and vesicular transport Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170)
r_klactV5368 good YU KOG1900 Nuclear structure Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV5368 1835104 1830749 -1452
(1452 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBL079w [YU] KOG1900 Nuclear pore complex Nup155 component (D Nu... 1589 0.0
YER105c [YU] KOG1900 Nuclear pore complex Nup155 component (D Nu... 1078 0.0
SPAC890.06 [YU] KOG1900 Nuclear pore complex Nup155 component (D... 449 e-125
Hs4758844 [YU] KOG1900 Nuclear pore complex Nup155 component (D ... 237 1e-61
7297801 [YU] KOG1900 Nuclear pore complex Nup155 component (D Nu... 127 1e-28
CE27626 [YU] KOG1900 Nuclear pore complex Nup155 component (D Nu... 90 2e-17
CE27625 [YU] KOG1900 Nuclear pore complex Nup155 component (D Nu... 90 2e-17
At1g14850 [YU] KOG1900 Nuclear pore complex Nup155 component (D ... 73 4e-12
>YBL079w [YU] KOG1900 Nuclear pore complex Nup155 component (D Nup154 sc
Nup157/Nup170)
Length = 1502
Score = 1589 bits (4115), Expect = 0.0
Identities = 801/1480 (54%), Positives = 1067/1480 (71%), Gaps = 58/1480 (3%)
Query: 21 PSANVNGLPMNGIGN--TSLVPQQQGSDGTIGTYGANMTNVIS-----GLNGNTVNPLNF 73
P N +P NG+ +S QQ + +Y +N + G ++NP N
Sbjct: 25 PLTNHQEVPRNGLNELASSATKAQQQPTHILNSYPITGSNPLMRASAMGATSGSINP-NM 83
Query: 74 NASHEHIKVTGLGAANPLNLASQYIDHLLRRDISTPVLDERSYYNNGVNYNFSKEVGGLG 133
+ +EHI+V+G+G + PL+LA +YIDHL +D +TPVLDERSYYN+GV+YNFS+E GLG
Sbjct: 84 SNMNEHIRVSGMGTSKPLDLAGKYIDHLQHKDSNTPVLDERSYYNSGVDYNFSREKNGLG 143
Query: 134 PFTPFERLNVINIPDEILQQVSTAEIKTNMGLFPDIERCWITVDSKLILWHYNNPSDFQS 193
FTPFE+ +V NIPDEIL + ST++ KT+MG+FP++ RCWIT+D+KLILW+ NN +++Q
Sbjct: 144 AFTPFEKQDVFNIPDEILHEFSTSQTKTDMGIFPELNRCWITIDNKLILWNINNDNEYQV 203
Query: 194 IDDIKHTILQVALVKPKPDTFVESINHLLLITTPFDIYILAISYDRISGSFNIFNTGMSV 253
+DD+KHTI +VALV+PKP+TFV ++ HLLLI+T ++++ AIS D+ + ++FNT +SV
Sbjct: 204 VDDMKHTIQKVALVRPKPNTFVPAVKHLLLISTTMELFMFAISLDKATNELSVFNTHLSV 263
Query: 254 SVHGLDVHEIVYYEKTGQIFFSGNSNGTNIWELQYSSSEDWFNNKCSKXXXXXXXXXXXX 313
V G+DV +IV +E++G+IFF+G ++G NIWEL YS S+DWFN+KCSK
Sbjct: 264 PVQGIDVIDIVSHERSGRIFFAGQASGLNIWELHYSGSDDWFNSKCSKVCLTKSALLSLL 323
Query: 314 PTNIFSKIPGSALVQSLFEEDSK----YAQEYITHLTVDQSRGILYSLSSKSVIRAYKIN 369
PTN+ S+IPG +Q+LFE++S ++QE IT LT+DQ RGI+YSLSSKS IRAY I
Sbjct: 324 PTNMLSQIPGVDFIQALFEDNSNGNGGFSQETITQLTIDQQRGIIYSLSSKSTIRAYVIT 383
Query: 370 GKSLDGPTTIEPSYIKRIMGTTPARGAAILGNKYLXXXXXXXXXXXXXXXLFLVAITIGG 429
KSL+GP +IEP+YI RI+GTT AR A ILG KYL LFLVA+T+GG
Sbjct: 384 EKSLEGPMSIEPAYISRIIGTTTARAAPILGPKYLKIVKISSVAPEENNNLFLVALTVGG 443
Query: 430 VRLYFNGSVNSGSVEALRLESIKFPPSSVSPETIEIELXXXXXXXTRKLTPFYSSLNSME 489
VRLYFNGS+ ++EALRLESIKFPPSSV+PE I+ EL ++ PF+S+L S E
Sbjct: 444 VRLYFNGSMGRFNIEALRLESIKFPPSSVTPEVIQQELLHQQQEQAKRSFPFFSNLMSSE 503
Query: 490 SVQLKYQXXXXXXXXXXXXXXIISPGIFFSAVTK-----HPAEQ--------TLGTMGTP 536
V LK+Q IISPGIFFSAV K H E+ T T G+
Sbjct: 504 PVLLKFQKKSSVLLETTKASTIISPGIFFSAVIKSSQQTHQQEKKENSSVTGTTATAGSK 563
Query: 537 VATVQNTPIQHKLFVSVPDYGILKNHGRYVENSVFLDTTAPVREVIPISSLFNGANKPEG 596
Q +QHKLFVSVPDYGILK HG+YVEN+ FL+T PV+++IP+S LFN KP+G
Sbjct: 564 TVKQQPVTLQHKLFVSVPDYGILKTHGKYVENATFLETAGPVQQIIPLSGLFNATTKPQG 623
Query: 597 YANAFATQYSVEPLKVAVLTNTSVEIYKYRNPDQILESLINNPLPFIVNYGLVETCSSAL 656
+AN FATQY+ E L+VAVLT+TS+EIYKYR PD+I E LI+NPLPF++NYG E CS+AL
Sbjct: 624 FANEFATQYTSETLRVAVLTSTSIEIYKYRTPDEIFEDLIDNPLPFVLNYGAAEACSTAL 683
Query: 657 FVTCKFNKSESLRSNALTLFTVGIPNVVEIKPTYNKYANSAVSTLLGKPSLNLMTPQKSS 716
FVTCK NKSE LRSNALT T+GIP VV+IKP YN+Y+ S VS+LL KP+L+ T
Sbjct: 684 FVTCKSNKSEKLRSNALTFLTMGIPGVVDIKPVYNRYSVSTVSSLLSKPTLSTAT----- 738
Query: 717 TELSKTANTLSTPNVSGANNFNLDDVILSARFYGTALLIARLFRDIWDKDIF------QL 770
T L ++ S P+ + +F+LDDVILS RFYG ALLI RL RDIW + +F ++
Sbjct: 739 TNLQQSITGFSKPSPANKEDFDLDDVILSPRFYGIALLITRLLRDIWGRHVFMTFTDNRV 798
Query: 771 DPHVKINPDNSVMKS--SIKGD------NIITKIVVSRGDIEYYLSSVMILNEFFQSYGX 822
H I+ + + S ++K D NII+K+ +S+ IEYYLSS+ ILNEFF +YG
Sbjct: 799 TSHAFISSSDPITPSINNLKSDEISQNRNIISKVSISKDCIEYYLSSINILNEFFITYGD 858
Query: 823 XXXXXXXXXXXXGE---KVVDKGEDVAHQAENVAMNAVIKLLQSIKESLSFLNVLFEESE 879
+V+DK E+VA+QAE++A+NA+IK++QSIKE LSFLNVL+EESE
Sbjct: 859 SISQISAPYVLANNSNGRVIDKTEEVANQAESIAINAMIKMVQSIKEGLSFLNVLYEESE 918
Query: 880 VDGYEGQYLAFVDIMKYLNFDIQYDLSKLKFKDIFNPNEQTKNLIREILSSIINRSITKG 939
V+G++ QYL F DI+ +++ D+Q DL KL FKD+F PN++TK+LIREIL SIINR+ITKG
Sbjct: 919 VEGFDNQYLGFKDIISFVSLDVQKDLVKLDFKDLFAPNDKTKSLIREILLSIINRNITKG 978
Query: 940 GSIEYIATALQERCGSFCSTGDVLGFRAVEHLRKAKEIGLRDQETLNYHLTNAAKLFERI 999
SIEY ATALQERCGSFCS D+LGFRA+EHLR+AKEIGLR+ ++LNYHL NA L E+I
Sbjct: 979 ASIEYTATALQERCGSFCSASDILGFRAIEHLRRAKEIGLRNYDSLNYHLKNATALLEQI 1038
Query: 1000 VDDVSLDKIKEAVGIMLELNYYPKTVEFLLNIANAMDKGKLALQYVADGSLEHDERKKYY 1059
VDD+S++K+KEAV +ML +NYYPK++EFLLNIAN+MDKGKLA QYVA+G LE+D+RK+YY
Sbjct: 1039 VDDLSIEKLKEAVSMMLSVNYYPKSIEFLLNIANSMDKGKLACQYVANGFLENDDRKQYY 1098
Query: 1060 NARVSIYEIVFETLIKVDQLAALPE--------NVNNQDIQKTRDEVYNVTLKYNDKLFH 1111
+ R+ +Y++VF+TLIKVD+LA + +++N D K R + Y LKYND+LFH
Sbjct: 1099 DKRILVYDLVFDTLIKVDELAEKKQSSKTQNQISISNDDEVKLRQKSYEAALKYNDRLFH 1158
Query: 1112 YQMYDWLVQQKSEEKLLQLDSDFILPYLEEKAAKSLEISNLLWVYQSKRSHFLEAAQILY 1171
Y MYDWLV Q EEKLL +++ FILPYL EKA SL+ISN+LWVY S+RS F E+A+ILY
Sbjct: 1159 YHMYDWLVSQNREEKLLDIETPFILPYLMEKAGSSLKISNILWVYYSRRSKFFESAEILY 1218
Query: 1172 SLAISDFDIPLQNRIEYLSRANVFCNGVSPPSQRQAMIQLSGMIKEVVDVASIQDEIVRA 1231
LA S+FDI L RIE+LSRAN FCN VSP SQ+Q ++QL+ I++ +VA IQ +I+
Sbjct: 1219 RLATSNFDITLFERIEFLSRANGFCNSVSPLSQKQRIVQLASRIQDACEVAGIQGDILSL 1278
Query: 1232 LKDDLRIDSTVRNEALQQLEGKILTVTELYNDFAAPLSYYEICLLIFKVSDFRNHEEIIS 1291
+ D RIDS +++E ++ L+GKIL+ +EL+NDFA PLSY+EI L IFK++DFR+HE I++
Sbjct: 1279 VYTDARIDSAIKDELIKTLDGKILSTSELFNDFAVPLSYHEIALFIFKIADFRDHEVIMA 1338
Query: 1292 KWEELFSSFKEHLSENNATDELEKSTTFISLASSTVIRVGKNVRTSEFVFPVVDLFPHIC 1351
KW+ELF S + E N T + E S FI+L S+ +I++GKNV+ SEF+FP+ +LFP +C
Sbjct: 1339 KWDELFQSLR---MEFNNTGKKEDSMNFINLLSNVLIKIGKNVQDSEFIFPIFELFPIVC 1395
Query: 1352 SLIYENLPKEHIKAGSIASIFIQAGVSYDRMYHVLKDLIETTTSSNDIYEQEMVWLIKEW 1411
+ YE LPKEHI +GSI SIFI AGVS+++MY++LK+LIET+ S N ++ +EM WLI EW
Sbjct: 1396 NFFYETLPKEHIVSGSIVSIFITAGVSFNKMYYILKELIETSDSDNSVFNKEMTWLIHEW 1455
Query: 1412 YHSDRKLRDLIPLEEIRSFDKYSIENDPLENYKKRTGDSV 1451
Y SDRK RD+I +I +Y I+NDP+E Y K +G+++
Sbjct: 1456 YKSDRKFRDIISYNDIIHLKEYKIDNDPIEKYVKNSGNNL 1495
>YER105c [YU] KOG1900 Nuclear pore complex Nup155 component (D Nup154 sc
Nup157/Nup170)
Length = 1391
Score = 1078 bits (2788), Expect = 0.0
Identities = 591/1464 (40%), Positives = 871/1464 (59%), Gaps = 101/1464 (6%)
Query: 3 IYSTPLKSNWNGNANFANPSANVNGLPM---------NG---IGNTSLVPQQQGSDGTIG 50
+YSTPLK + + SA++ G + NG + + S + +++ +
Sbjct: 1 MYSTPLKKRIDYDRETFTASASLGGNRLRNRPRDDQNNGKPNLSSRSFLSERKTRKDVLN 60
Query: 51 TYGANMTNVISGLNGNTVNPLNFNASHEHIKVTGLGAANPLNLASQYIDHLLRRDISTPV 110
YG + S L T H+K++GL ++ PL LAS+++ L RD +TP+
Sbjct: 61 KYGEAGNTIESELRDVTT----------HVKISGLTSSEPLQLASEFVQDLSFRDRNTPI 110
Query: 111 LDERSYYNNGVNYNFSKEVGGLGPFTPFERLNVINIPDEILQQVSTAEIKTNMGLFPDIE 170
LD YY+ G++YNFS EVGGLG FTPF+R V NIPDE+L QVS EIK++MG+F ++
Sbjct: 111 LDNPDYYSKGLDYNFSDEVGGLGAFTPFQRQQVTNIPDEVLSQVSNTEIKSDMGIFLELN 170
Query: 171 RCWITVDSKLILWHYNNPSDFQSIDDIKHTILQVALVKPKPDTFVESINHLLLITTPFDI 230
CWIT D+KLILW+ NN S++ ID+I+HTIL+V LVKP P+TFV S+ +LL++ T FDI
Sbjct: 171 YCWITSDNKLILWNINNSSEYHCIDEIEHTILKVKLVKPSPNTFVSSVENLLIVATLFDI 230
Query: 231 YILAISYDRISGSFNIFNTGMSVSVHGLDVHEIVYYEKTGQIFFSGNSNGTNIWELQYSS 290
YIL IS++ + NIFNTG+ V+V G +V I+ YE+TGQIFF+G ++G N+WELQY+
Sbjct: 231 YILTISFNDRTHELNIFNTGLKVNVTGFNVSNIISYERTGQIFFTGATDGVNVWELQYNC 290
Query: 291 SEDWFNNKCSKXXXXXXXXXXXXPTNIFSKIPGSALVQSLFEEDSKYAQEYITHLTVDQS 350
SE+ FN+K +K PT + IPG L+Q + E D+ +E I+ L VDQS
Sbjct: 291 SENLFNSKSNKICLTKSNLANLLPTKLIPSIPGGKLIQKVLEGDAGTEEETISQLEVDQS 350
Query: 351 RGILYSLSSKSVIRAYKINGKSLDGPTTIEPSYIKRIMGTTPARGAAILGNKYLXXXXXX 410
RG+L++LS+KS++R+Y I L GP I+ ++I+R M + + +L N+
Sbjct: 351 RGVLHTLSTKSIVRSYLITSNGLVGPVLIDAAHIRRGMNALGVKNSPLLSNRAFKIAKIV 410
Query: 411 XXXXXXXXXLFLVAITIGGVRLYFNGSVNSGSVEALRLESIKFPPSSVSPETIEIELXXX 470
LFL IT GVRLYF GS++ S+ +L+L+S+KFPP+S+S
Sbjct: 411 SISMCENNDLFLAVITTTGVRLYFKGSISRRSIGSLKLDSVKFPPTSIS----------S 460
Query: 471 XXXXTRKLTPFYSSLNSMESVQLKYQXXXXXXXXXXXXXXIISPGIFFSAVTKHPAEQTL 530
+ + LN+ ++ L Q IISPGI+F+ V K L
Sbjct: 461 SLEQNKSFIIGHHPLNTHDTGPLSTQKASSTYINTTCASTIISPGIYFTCVRKRANSGEL 520
Query: 531 GTMGTPVATVQNTPIQHKLFVSVPDYGILKNHGRYVENSVFLDTTAPVREVIPISSLFNG 590
T A ++N +HKL+VS PDYGILKN+G+YVEN+ LDTT ++E++P++ FN
Sbjct: 521 SKGITNKALLENKE-EHKLYVSAPDYGILKNYGKYVENTALLDTTDEIKEIVPLTRSFNY 579
Query: 591 ANKPEGYANAFATQYSVEPLKVAVLTNTSVEIYKYRNPDQILESLINNPLPFIVNYGLVE 650
+ P+GYAN FA+QYS EPLKVAVLT+ ++EIY YR PD++ ESLI NPLPFI +YGL E
Sbjct: 580 TSTPQGYANVFASQYSAEPLKVAVLTSNALEIYCYRTPDEVFESLIENPLPFIHSYGLSE 639
Query: 651 TCSSALFVTCKFNKSESLRSNALTLFTVGIPNVVEIKPTYNKYANSAVSTLLGKPSLNLM 710
CS+AL++ CKFNKSE ++S+AL F+ GIP VVEIKP ++ + S
Sbjct: 640 ACSTALYLACKFNKSEHIKSSALAFFSAGIPGVVEIKPKSSRESGS-------------- 685
Query: 711 TPQKSSTELSKTANTLSTPNVSGANNFNLDDVILSARFYGTALLIARLFRDIWDKDIFQL 770
P S K+ D ++LS RFYG+ALLI RLF IW++ +F
Sbjct: 686 VPPISQNLFDKSG--------------ECDGIVLSPRFYGSALLITRLFSQIWEERVF-- 729
Query: 771 DPHVKINPDNSVMKSSIKGDNI-ITKIVVSRGDIEYYLSSVMILNEFFQSYGXXXXXXXX 829
V K + K + + I ++R +EYYLSS+ +L +FF +
Sbjct: 730 -----------VFKRASKTEKMDAFGISITRPQVEYYLSSISVLADFFNIHRPSFVSF-- 776
Query: 830 XXXXXGEKVVDKGED--VAHQAENVAMNAVIKLLQSIKESLSFLNVLFEESEVDGYEGQY 887
V KG + A AE++AMNA+I L+ SIK++LS +NV +E ++D ++
Sbjct: 777 --------VPPKGSNAITASDAESIAMNALILLINSIKDALSLINVFYE--DIDAFKSLL 826
Query: 888 LAFVDIMKYLNFDIQYDLSKLKFKDIFNPNEQTKNLIREILSSIINRSITKGGSIEYIAT 947
+ + + LKF D+F PN +TK LI+EIL ++N +I G S +YI
Sbjct: 827 NTLMGAGGVYDSKTREYFFDLKFHDLFTPNAKTKQLIKEILIEVVNANIASGTSADYIVN 886
Query: 948 ALQERCGSFCSTGDVLGFRAVEHLRKAKEIGLRDQETLNYHLTNAAKLFERIVDDVSLDK 1007
L+ER GSFC + D+L +RA EHL A++ + D + HL A L+ER +++ L +
Sbjct: 887 VLKERFGSFCHSADILCYRAGEHLEAAQKFEMIDSKISRNHLDTAIDLYERCAENIELCE 946
Query: 1008 IKEAVGIMLELNYYPKTVEFLLNIANAMDKGKLALQYVADGSLEHDERKKYYNARVSIYE 1067
++ V IM++LNY PKTV FLL A+ +DKG A +YV+ G D RK +Y+ R+++Y
Sbjct: 947 LRRVVDIMVKLNYQPKTVGFLLRFADKIDKGNQAQEYVSRGCNTADPRKVFYDKRINVYT 1006
Query: 1068 IVFETLIKVDQLAALPENVNNQDI------QKTRDEVYNVTLKYNDKLFHYQMYDWLVQQ 1121
++FE + VD ++ ++ + +I + VY+V + N++ FHY YDWLV
Sbjct: 1007 LIFEIVKSVDDYTSIEQSPSIANISIFSPASSLKKRVYSVIMNSNNRFFHYCFYDWLVAN 1066
Query: 1122 KSEEKLLQLDSDFILPYLEEKAAKSLEISNLLWVYQSKRSHFLEAAQILYSLAISDFDIP 1181
K ++ LL+LDS F+LPYL+E+A KSLEISNLLW Y K HFLEAA +LY+LA SDFD+
Sbjct: 1067 KRQDYLLRLDSQFVLPYLKERAEKSLEISNLLWFYLFKEEHFLEAADVLYALASSDFDLK 1126
Query: 1182 LQNRIEYLSRANVFCNGVSPPSQRQAMIQLSGMIKEVVDVASIQDEIVRALKDDLRIDST 1241
L RIE L+RAN C+ + Q+ A++QLS I E+ D+ASIQD+++ ++++ RID
Sbjct: 1127 LSERIECLARANGLCDSSTSFDQKPALVQLSENIHELFDIASIQDDLLNLVRNETRIDED 1186
Query: 1242 VRNEALQQLEGKILTVTELYNDFAAPLSYYEICLLIFKVSDFRNHEEIISKWEELFSSFK 1301
R + +L G++L +++L+ND A PL YYEI L IFKVS F++ + I +W L S K
Sbjct: 1187 YRKQLTLKLNGRVLPLSDLFNDCADPLDYYEIKLRIFKVSQFKDEKVIQGEWNRLLDSMK 1246
Query: 1302 EHLSENNATDELEKSTTFISLASSTVIRVGKNVRTSEFVFPVVDLFPHICSLIYENLPKE 1361
S + + E +F+S S+T+IR+GK R ++ VFPV L I + + K
Sbjct: 1247 NAPSPDVGSVGQE---SFLSSISNTLIRIGKTTRDTDVVFPVHFLMNKI---LESFIDKS 1300
Query: 1362 HIKAGSIASIFIQAGVSYDRMYHVLKDLIETTTSSNDIYEQEMVWLIKEWYHSDRKLRDL 1421
GS+ S+F+ AGVS+ ++Y++L +IE + + ++ ++EMVWLIK+WY SD LR
Sbjct: 1301 SAADGSVCSMFLLAGVSHLKLYYILSRIIENSEGNVELAKKEMVWLIKDWYQSDSDLRGS 1360
Query: 1422 IPLEEIRSFDKYSIENDPLENYKK 1445
I E+I+ +KY DP+++Y K
Sbjct: 1361 IAPEQIKKLEKYDPNTDPVQDYVK 1384
>SPAC890.06 [YU] KOG1900 Nuclear pore complex Nup155 component (D Nup154 sc
Nup157/Nup170)
Length = 1315
Score = 449 bits (1155), Expect = e-125
Identities = 363/1358 (26%), Positives = 623/1358 (45%), Gaps = 163/1358 (12%)
Query: 132 LGPFTPFERLNVINIPDEILQQVSTAEIKTNMGLFPDIERCWITVDSKLILWHYNNPSDF 191
L + PF +V+NIPD I +Q + E T MGLF +I+R WITVD++L LW Y + +F
Sbjct: 56 LSGWKPFYLRSVVNIPDRIFEQYNRTECFTQMGLFAEIQRAWITVDNRLFLWDYLSGQNF 115
Query: 192 QSIDDIKHTILQVALVKPKPDTFVESINHLLLITTPFDIYILAISYDRISGSFNIFNTGM 251
Q+ +D+ HTI+ V LV+PK + FV I HLL+I T ++ +L ++ D +G + F+TG+
Sbjct: 116 QAYEDLSHTIVNVKLVRPKANVFVSEIQHLLVIATSQEMLLLGVTIDEKTGELSFFSTGI 175
Query: 252 SVSVHGLDVHEIVYYEKTGQIFFSGNSNGTNIWELQYSSSEDWFNNKCSKXXXXXXXXXX 311
+SV G++V+ IV E G+IFFSGN + N++E Y E WF+ +CSK
Sbjct: 176 QISVQGINVNCIVSSED-GRIFFSGNKD-PNLYEFSYQLEEGWFSRRCSKINITGSVFDN 233
Query: 312 XXPTNIFSKIPGSALVQSLFEEDSKYAQEYITHLTVDQSRGILYSLSSKSVIRAYKINGK 371
P+ G + Q + VD SR +LY L S + Y++
Sbjct: 234 FIPSFFSFGTHGDGIKQ----------------IAVDDSRSLLYVLRETSSVSCYELTKN 277
Query: 372 SLDGPTTIEPSYI----KRIMGTTPARGAAILGNKYLXXXXXXXXXXXXXXXLFLVAITI 427
++ S + + + T+P +L + ++ VAIT
Sbjct: 278 GVNRCVFYSFSSMISQAQMLNATSP-----LLDPRTTQIVSIVPIPAYESQQIYCVAITS 332
Query: 428 GGVRLYFNG-------------SVNSGSVEALRLESIKFPPSSVSPETIEIELXXXXXXX 474
G R Y G +++S L+L ++FPP +++
Sbjct: 333 TGCRFYMRGGRGPISHYAPSNSTLSSTPPSTLQLTFVRFPPP--------MQVENYASSR 384
Query: 475 TRKLTPFYSSLNSMESVQLKYQXXXXXXXXXXXXXXIISPGIFFSAVTKHPAEQTLGTMG 534
PF+ S Q + I F A++
Sbjct: 385 NYPANPFFLQNQSTSQQQPERSSAVKTTPMKCSSLSNIYTSDLFFAISS----------- 433
Query: 535 TPVATVQNTPIQHKLFVSVPDYGILKNHGR------YVENSVFLDTTAPVREVIPISSLF 588
NT + + P+ G + N + +E+S+++ V+++ I
Sbjct: 434 ------SNTNEGDVVCCTAPEVGRIANAWQSGTQPSLIESSMYVPIKGFVQDIKCIQ--- 484
Query: 589 NGANKPEGYANAFATQYSVEPLKVAVLTNTSVEIYKYRNPDQILESLIN----------- 637
N E N +Q++ P A+LTNT V + +R P +L S I
Sbjct: 485 ---NSRE--RNELVSQFNTPPPTFAILTNTGVYVVVHRRPIDVLASAIRMGPSLSSGIDG 539
Query: 638 NPLPFIVNYGLVETCSSALFVTCKFNKSESLRSNALTLFTVGIPNVVEIKPTYNKYANSA 697
F + G E C++ L + S+A F S
Sbjct: 540 QVQLFFESVGRAEGCATCLGIVSGCLDQGDF-SHAAANF-------------------SG 579
Query: 698 VSTLLGKPSLNLMTPQKSSTELSKTANTLSTPNVSGANNFNLDDVILSARFYGTALLIAR 757
+T L + L L +K E A + + ++ +L+ V LS G A I+R
Sbjct: 580 STTKLAQADL-LDIVKKYYIEFGGKAFIDQSRYNNQYDSSSLEFVRLSGCHDGLASSISR 638
Query: 758 LFRDIWDKDIFQLDPHVKINPDNSVMKSSIKGDNIITKIVVSRGDIEYYLSSVMILNEFF 817
+ R++W + ++ ++ I + +I S ++ L+ F
Sbjct: 639 IIRNVWKNHV--------------IIAKKMQNKRIHYAPAFNATEILKIQSGLLYLSTFL 684
Query: 818 QSYGXXXXXXXXXXXXXGEKVVDKGEDVAHQAENVAMNAVIKLLQSIKESLSFLNVLFEE 877
++ G V +++A QAE+ A++A++ +LQ I E +SFL L +
Sbjct: 685 ENNKSFIEGLNSPNTLIGSSNV--ADEIAVQAEHRALSALLLVLQQIVEGISFLLFLNDT 742
Query: 878 SEVDGYEGQYLAFVDIMKYLNFDIQYDLSKLKFKDIFNPNEQTKNLIREILSSIINRSIT 937
D F +I+ + DIQ S + F + F +++ + + +E+++S++NR +
Sbjct: 743 GVSD--------FHEIVSSTSIDIQKSCSNMTFGEFFT-SKRGREVTKELVNSLVNRHLQ 793
Query: 938 KGGSIEYIATALQERCGSFCSTGDVLGFRAVEHLRKAKE-IGLRDQETLNYHLTNAAKLF 996
GG+I+ ++ L+++CGSFCS DVL F+AVE L+KAK+ + + ++++L + + LF
Sbjct: 794 SGGNIDMVSQLLRKKCGSFCSADDVLIFKAVESLKKAKDTVDIEERQSL---IELSYTLF 850
Query: 997 ERIVDDVSLDKIKEAVGIMLELNYYPKTVEFLLNIANAMDKGKLALQYVADGSLEHDERK 1056
++ + + ++ AV LN Y V L++A+A D AL Y+ DG E+D R+
Sbjct: 851 KKAAHVFTPEDLRLAVEEYKSLNAYTTAVNLALHVASARDDRNQALSYLVDGMPENDPRR 910
Query: 1057 KYYNARVSIYEIVFETLIKVDQLAALPENVNNQDIQKTRDEVYNVTLKYNDKLFHYQMYD 1116
+ + +R Y +FE L D L E+ + D + +VY+ + D+LFHY YD
Sbjct: 911 EPFESRTKCYSYIFEIL---DSL----ESQMSNDSSAIKVDVYDTIQRSKDELFHYCFYD 963
Query: 1117 WLVQQKSEEKLLQLDSDFILPYLEEKAAKSLEISNLLWVYQSKRSHFLEAAQILYSLAIS 1176
W + ++L+++DS +I YLE + K ++I++LLW Y +KR + +A+ +LY LA +
Sbjct: 964 WYSFKGLTDRLIEIDSPYIQSYLERNSTKDMKIADLLWQYYAKREQYYQASIVLYDLATT 1023
Query: 1177 DFDIPLQNRIEYLSRANVFCNGVSPPSQRQAMIQLSGMIKEVVDVASIQDEIVRALKDDL 1236
L+ RIEYL+RA F + P S R M ++ + E +DVASIQD+++ A++ D+
Sbjct: 1024 HLAFSLEQRIEYLTRAKGFGSCHVPNSLRHKMNKVMLSVLEQLDVASIQDDVLIAIRGDM 1083
Query: 1237 RIDSTVRNEALQQLEGKILTVTELYNDFAAPLSYYEICLLIFKVSDFRNHEEIISKWEEL 1296
RI ++ R E +QL+G+I+ +++L+N++A PL Y EICL IF+ +D+R EI++ WE +
Sbjct: 1084 RIPTSKREELSKQLDGEIIPLSDLFNNYADPLGYGEICLSIFQCADYRGINEILNCWESI 1143
Query: 1297 FSSFKEHLSENNATDELEKSTTFISLASSTVIRVGKNVRTSEFVFPVVDLFPHICSLIYE 1356
+ EN + S + SST+ + SE VFP+ + I
Sbjct: 1144 IKT----THENAIISPVGSSP--VEAVSSTLKNLTLRFSQSENVFPIEQII-DITERYAF 1196
Query: 1357 NLPKEHIKAGSIASIFIQAGVSYDRMYHVLKDLI---ETTTSSND---IYEQEMVWLIKE 1410
+ E + G + F+ AGVS++ ++ VL L E D +E+ L+K
Sbjct: 1197 DQQGEAVATGWVIDTFLGAGVSHELIFIVLNQLYDRREKPWQGKDRLFFLIKEVTHLLKL 1256
Query: 1411 WYHSDRKLRDLIPLEEIRSFDKYSIENDPLENYKKRTG 1448
W+ + +R + SFD + + +E YK G
Sbjct: 1257 WH--EVSVRAGVAQTSKPSFDA-PLVLEAIEKYKNALG 1291
>Hs4758844 [YU] KOG1900 Nuclear pore complex Nup155 component (D Nup154 sc
Nup157/Nup170)
Length = 1332
Score = 237 bits (604), Expect = 1e-61
Identities = 281/1332 (21%), Positives = 534/1332 (39%), Gaps = 192/1332 (14%)
Query: 144 INIPDEILQQVSTAEIKTNMGLFPDIERCWITVDSKLILWHYNNPSDFQSIDDIKHTILQ 203
+ +P E+++Q + MG+FP I R W+T+DS + +W+Y + D D + TIL
Sbjct: 28 VPLPPELVEQFGHMQCNCMMGVFPPISRAWLTIDSDIFMWNYEDGGDLAYFDGLSETILA 87
Query: 204 VALVKPKPDTFVESINHLLLITTPFDIYILAISYDRISGSFNIFNTGMSVSVHGL----- 258
V LVKPK F + HLL++ TP DI IL +SY + + N +S + L
Sbjct: 88 VGLVKPKAGIFQPHVRHLLVLATPVDIVILGLSYANLQTGSGVLNDSLSGGMQLLPDPLY 147
Query: 259 ----DVHEIVYYEKT--GQIFFSGNSNGTNIWELQYSSSEDWFNNKCSKXXXXXXXXXXX 312
D ++ T G+IF +G ++E+ Y + WF+ +C K
Sbjct: 148 SLPTDNTYLLTITSTDNGRIFLAGKDGC--LYEVAYQAEAGWFSQRCRKINHSKSSLSFL 205
Query: 313 XPTNIFSKIPGSALVQSLFEEDSKYAQEYITHLTVDQSRGILYSLSSKSVIRAYKINGKS 372
P+ L+Q F ED Q + +D SR ILY+ S K VI+ Y + G+
Sbjct: 206 VPS----------LLQFTFSEDDPILQ-----IAIDNSRNILYTRSEKGVIQVYDL-GQD 249
Query: 373 LDGPTTIEPSYIKRIMGTTPARGAAILGNKYLXXXXXXXXXXXXXXXLFLVAITIGGVRL 432
G + + I+ I + + L+A+T GVRL
Sbjct: 250 GQGMSRVASVSQNAIVSAAGNIARTIDRSVFKPIVQIAVIENSESLDCQLLAVTHAGVRL 309
Query: 433 YFNGSVNSGSVEALRLESIKFPPSSVSPETIEIELXXXXXXXTRKLTPFYSSLNSMESVQ 492
YF+ + F P T+ + +L P +S+ +++E
Sbjct: 310 YFS--------------TCPFRQPLARPNTLTLVHV--------RLPPGFSASSTVEKPS 347
Query: 493 LKYQXXXXXXXXXXXXXXIISPGIFFSAVTKHPAEQTLGTMGTPVATVQNTPIQHKLFVS 552
++ + S GI A +++ L + Q ++ ++
Sbjct: 348 KVHRA-------------LYSKGILLMAASENEDNDILWCVNHDTFPFQKPMMETQMTAG 394
Query: 553 VPDYGILKNHGRYVENSVFLDTTAPVREVIPISSLFNGANKPEGYANAFATQYSVEPLKV 612
V + + +D + + P+ N + P + Q+ + P K
Sbjct: 395 VDGHSWALSA---------IDELKVDKIITPL----NKDHIPITDSPVVVQQHMLPPKKF 441
Query: 613 AVLT-NTSVEIYKYRNPDQILESLINNP-------LPFIVNYGLVETCSSALFVTCKFNK 664
+L+ S+ +K R DQ+ L++N F + + C++ L + C
Sbjct: 442 VLLSAQGSLMFHKLRPVDQLRHLLVSNVGGDGEEIERFFKLHQEDQACATCLILACSTAA 501
Query: 665 SESLRS------------NALTLFTVGIPNVVEIKPTYNK--YANSAVST--------LL 702
+ S A F +P + P Y++S V + L
Sbjct: 502 CDREVSAWATRAFFRYGGEAQMRFPTTLPPPSNVGPILGSPVYSSSPVPSGSPYPNPSFL 561
Query: 703 GKPSLNLMTPQKSSTELSKTANTLSTPNVSGANNFNLDDVILSARFYGTALLIARLFRDI 762
G PS + P S+ + N+S +++ S + G + +R+ +I
Sbjct: 562 GTPSHGIQPPAMSTPVCALGNPATQATNMSCVTG---PEIVYSGKHNGICIYFSRIMGNI 618
Query: 763 WDKDIFQLDPHVKINPDNSVMKSSIKGDNIITKIVVSRGDIEYYLSSVMILNEFFQS--Y 820
WD + N + + ++SS+ + + + +G L + N F
Sbjct: 619 WDASLVVERIFKSGNREITAIESSVPCQLLESVLQELKG-----LQEFLDRNSQFAGGPL 673
Query: 821 GXXXXXXXXXXXXXGEKVVDKGEDVAHQ------------AENVAMNAVIKLLQSIKESL 868
G G + G Q +E +++ A+ +L++ ++L
Sbjct: 674 GNPNTTAKVQQRLIGFMRPENGNPQQMQQELQRKFHEAQLSEKISLQAIQQLVRKSYQAL 733
Query: 869 SFLNVLFEESEVDGYEGQYLAFVDIMKYLNFDIQYDLSKLKFKDIFNPNEQTKNLIREIL 928
+ +L E F I+ L ++Q L FKD+ + K L ++
Sbjct: 734 ALWKLLCEHQ-----------FTIIVAELQKELQEQLKITTFKDLVI---RDKELTGALI 779
Query: 929 SSIINRSITKGGSIEYIATALQERCGSFCSTGDVLGFRAVEHLRKAKEIGLRDQETLNYH 988
+S+IN I +++ I+ LQ+ C ST D + +A E L++++++ + ++
Sbjct: 780 ASLINCYIRDNAAVDGISLHLQDICPLLYSTDDAICSKANELLQRSRQVQNKTEK--ERM 837
Query: 989 LTNAAKLFERIVDDVSLDKIKEAVGIMLELNYYPKTVEFLLNIANAMDKGKLALQYVADG 1048
L + K +++I + V L + ++ +Y VE L A D L L + G
Sbjct: 838 LRESLKEYQKISNQVDLSNV---CAQYRQVRFYEGVVELSLTAAEKKDPQGLGLHFYKHG 894
Query: 1049 SLEHD-ERKKYYNARVSIYEIVFETLIK-VDQLAALPEN------------------VNN 1088
E D + + R++ Y+ + +TL + V+Q A P++ ++N
Sbjct: 895 EPEEDIVGLQAFQERLNSYKCITDTLQELVNQSKAAPQSPSVPKKPGPPVLSSDPNMLSN 954
Query: 1089 QDIQKTRDEVYNVTLKYNDKLFHYQMYDWLVQQKSEEKLLQLDSDFILPYLEEKA---AK 1145
++ +++ ++ + D+LF +Y+WL+Q +KLLQ+ S F+ P+L A
Sbjct: 955 EEAGHHFEQMLKLSQRSKDELFSIALYNWLIQVDLADKLLQVASPFLEPHLVRMAKVDQN 1014
Query: 1146 SLEISNLLWVYQSKRSHFLEAAQILYSLA-ISDFDIPLQNRIEYLSRANVFCNGVSPPSQ 1204
+ +LLW Y K F AA++L LA + +I LQ R+EY++RA + + S
Sbjct: 1015 RVRYMDLLWRYYEKNRSFSNAARVLSRLADMHSTEISLQQRLEYIARAILSAKSSTAISS 1074
Query: 1205 RQAMIQLSGMIKEVVDVASIQDEIVRALKDDLRIDSTVRNEALQQLEGKILTVTELYNDF 1264
A + ++E ++VA IQ +I L+ S+V+ +A+ QL+ +++ +T+LY +F
Sbjct: 1075 IAADGEFLHELEEKMEVARIQLQIQETLQRQYSHHSSVQ-DAVSQLDSELMDITKLYGEF 1133
Query: 1265 AAPLSYYEICLLIFKVSDFRNHEEIISKWEELFSSFKEHLSENNATDELEKSTTFISLAS 1324
A P E L I + + + + + W+++ ++ LS++ ++ + S
Sbjct: 1134 ADPFKLAECKLAIIHCAGYSDPILVQTLWQDI---IEKELSDSVTLSSSDR----MHALS 1186
Query: 1325 STVIRVGKNVRTSEFVFP----VVDLFPHICSLIYENLPKEHIKAGSIASIFIQAGVSYD 1380
++ +GK + FP V L +C+L ++ G + + GV
Sbjct: 1187 LKIVLLGKIYAGTPRFFPLDFIVQFLEQQVCTLNWD--------VGFVIQTMNEIGVPLP 1238
Query: 1381 RMYHVLKDLIET 1392
R+ V L ++
Sbjct: 1239 RLLEVYDQLFKS 1250
>7297801 [YU] KOG1900 Nuclear pore complex Nup155 component (D Nup154 sc
Nup157/Nup170)
Length = 1365
Score = 127 bits (319), Expect = 1e-28
Identities = 87/313 (27%), Positives = 138/313 (43%), Gaps = 64/313 (20%)
Query: 146 IPDEILQQVSTAEIKTNMGLFPDIERCWITVDSKLILWHYNNPSDFQSIDDIKHTILQVA 205
IP+EIL+ + MGLFP+I R W+T+DS++ +W +N D D + H I+ V
Sbjct: 78 IPNEILEHFKHIKCHCTMGLFPEIGRAWLTIDSEIYIWTFNQTRDVAYYDGLSHLIVSVG 137
Query: 206 LVKPKPDTFVESINHLLLITTPFDIYILAISYDRIS-GSFNIFNTGMSVSVHGLDVHEIV 264
LVKPKP FV+ + +LL++TTP ++ +L +++ S + N V V G D I
Sbjct: 138 LVKPKPGVFVQDVKYLLVLTTPIEVIVLGVTFGESSYNEMQLMN--RPVFVIGTDNVSIS 195
Query: 265 YYEKT--GQIFFSGNSNGTNIWELQYSSSEDWFNNKCSKXXXXXXXXXXXXPT--NIFSK 320
+ T G+IF G ++E+ Y + WF +C K P+ +FS+
Sbjct: 196 VIKGTDDGRIFLGGRDG--CLYEIYYQAESSWFGKRCKKINLSQGLVSYMVPSFLKVFSE 253
Query: 321 IPGSALVQSLFEEDSKYAQEYITHLTVDQSRGILYSLSSKSVIRAYKIN----------- 369
+ + I H+ +D SR +LY L+ K VI A+ I+
Sbjct: 254 V------------------DPIEHIEIDNSRKLLYVLTEKGVIEAWDISTSYTTARRLGR 295
Query: 370 -------GKSLDGPTTIEPSYIKRIMGTTPARGAAILGNKYLXXXXXXXXXXXXXXXLFL 422
+++ TT++PS K + P L L
Sbjct: 296 ITQNDITNQAVSLITTVDPSIFKSVKAICP-------------------LSADDADKLHL 336
Query: 423 VAITIGGVRLYFN 435
VA+T GVRL+F+
Sbjct: 337 VAVTQCGVRLFFS 349
Score = 93.2 bits (230), Expect = 3e-18
Identities = 89/395 (22%), Positives = 175/395 (43%), Gaps = 30/395 (7%)
Query: 927 ILSSIINRSITKGGSIEYIATALQERCGSFCSTGDVLGFRAVEHLRKAKEIGLRDQETLN 986
++ S+IN + + ++ L+E C + D + ++A E L AK ++
Sbjct: 819 LIISLINLYLKDAAGVSEVSKNLRENCPNLYRHEDDVTYKATELLMNAKNCTSATEK--E 876
Query: 987 YHLTNAAKLFERIVDDVSLDKIKEAVGIMLELNYYPKTVEFLLNIANAMDKGKLALQYVA 1046
+ L + + + L I + +++ +E A+ D ++ + +
Sbjct: 877 HMLRTTLHMCKEAAPTLPLHSICMQ---FISADFFEGVIELSAVCASKSDPEEVGVHFYN 933
Query: 1047 DGSLEHDERKKY--YNARVSIYEIVFETLIKVDQLAALPENVNNQDIQ------------ 1092
+G D+R+ Y + R++ Y+ V L + Q +V ++ I
Sbjct: 934 NGE-PADDREGYTCFATRMAYYKEVQLMLDHIYQRVCNKTHVQDKSINPLKGTAKASDAK 992
Query: 1093 ----KTRDEVYNVTLKYNDKLFHYQMYDWLVQQKSEEKLLQLDSDFILPYLEEKAAKSLE 1148
+T ++ TLK D L H +Y+WL+ ++LL + + +L +++++
Sbjct: 993 NGATQTIPKIVAHTLKVKDPLIHITLYEWLLAHDMLKELLDVVEPSLGEFLRRSVSQNVD 1052
Query: 1149 ---ISNLLWVYQSKRSHFLEAAQILYSLAISDFD-IPLQNRIEYLSRANVFCNGVSPPSQ 1204
+ +LLW Y K SH +AA IL +LA++ + I L+ RIEYL RA + + S
Sbjct: 1053 NVVLIDLLWKYYEKNSHHSQAAHILDNLAMTRSENINLEQRIEYLVRAVMCMRNGNVGSS 1112
Query: 1205 RQAMIQLSGMIKEVVDVASIQDEIVRALKDDLRIDSTVRNEALQQLEGKILTVTELYNDF 1264
I L + ++ +D+A +Q ++ A+ + L D A+++L + +T+LY F
Sbjct: 1113 LSNGIFLKEL-EDKLDIARVQKSVLAAMTE-LASDKLEAATAVKELNYALYDITQLYQHF 1170
Query: 1265 AAPLSYYEICLLIFKVSDFRNHEEIISKWEELFSS 1299
A P +E L I S + I S W ++ +S
Sbjct: 1171 AEPFDLWECQLSILNCSHHNDPLLIESVWGQIINS 1205
>CE27626 [YU] KOG1900 Nuclear pore complex Nup155 component (D Nup154 sc
Nup157/Nup170)
Length = 1215
Score = 90.1 bits (222), Expect = 2e-17
Identities = 96/407 (23%), Positives = 163/407 (39%), Gaps = 62/407 (15%)
Query: 85 LGAANPLNLASQYIDHLLRRDISTPVLDERSYYNNGVNYNFSKEVGGLGP------FTPF 138
LG+A+ A+ + H + + + T +R + + + V GLG F
Sbjct: 8 LGSADSAEAAANKVAHHVEQMMETSDFFDR------LTQHGTTPVSGLGEKFYVKGAPEF 61
Query: 139 ERLNVINIPDEILQQVSTAEIKTNMGLFPDIERCWITVDSKLILWHYNNPSDFQSIDDIK 198
I IP E+ Q+S + +MG F I R W+ +D+ L +W+Y D D
Sbjct: 62 VSTRRIPIPGELQMQMSNIHSEFSMGFFTQISRVWVVIDNNLYMWNYETNDDLAFFDSSD 121
Query: 199 HTILQVALVKPKPDTFVESINHLLLITTPFDIYILAISYDRISGSFNIFNTG----MSVS 254
IL+V+LV KP F I + L++ T DI + + +D + + + ++
Sbjct: 122 AAILKVSLVNIKPGVFEPEIQYGLVVGTISDICLYPV-FDFVENGASSISIDSKRCFKIA 180
Query: 255 VHGLDVHEIVYYEKTGQIFFSGNSNGTNIWELQYSSSEDWF---NNKCSKXXXXXXXXXX 311
+ G V++I Y G++F++ + ++E Y WF N+KC
Sbjct: 181 LDGATVNDI-SYTSNGRVFYTADD---QLFEFVYEKQNGWFGSTNHKC------------ 224
Query: 312 XXPTNIFSKIPGSALVQSLFEEDSKYAQEYITHLTVDQSRGILYSLSSKSVIRAYKIN-- 369
N + I G+ + F ++E + +T+D+SR I+Y L + + +
Sbjct: 225 -RGVNQTASILGTLISLPFFGS----SKEPLDQITIDKSRNIMYLLGRAGTVSVWDLGAD 279
Query: 370 ----GKSLDGPTT--IEPSYIKRIMGTTPARGAAILGNKYLXXXXXXXXXXXXXXXLFLV 423
K L P + ++I G +I K L L LV
Sbjct: 280 GAACAKFLSVPISKIAHEAHILTQFGHDETSFHSITSIKAL--------EASQSAALNLV 331
Query: 424 AITIGGVRLYFNGSVNSGSVEALRLES-----IKFPPSSVSPETIEI 465
A T GVRLYF+ S S A+ S P +SV P+ + +
Sbjct: 332 ATTAKGVRLYFSVSTGPQSTMAMFNNSGTPNERNRPQTSVRPQCLRV 378
>CE27625 [YU] KOG1900 Nuclear pore complex Nup155 component (D Nup154 sc
Nup157/Nup170)
Length = 411
Score = 90.1 bits (222), Expect = 2e-17
Identities = 96/407 (23%), Positives = 163/407 (39%), Gaps = 62/407 (15%)
Query: 85 LGAANPLNLASQYIDHLLRRDISTPVLDERSYYNNGVNYNFSKEVGGLGP------FTPF 138
LG+A+ A+ + H + + + T +R + + + V GLG F
Sbjct: 8 LGSADSAEAAANKVAHHVEQMMETSDFFDR------LTQHGTTPVSGLGEKFYVKGAPEF 61
Query: 139 ERLNVINIPDEILQQVSTAEIKTNMGLFPDIERCWITVDSKLILWHYNNPSDFQSIDDIK 198
I IP E+ Q+S + +MG F I R W+ +D+ L +W+Y D D
Sbjct: 62 VSTRRIPIPGELQMQMSNIHSEFSMGFFTQISRVWVVIDNNLYMWNYETNDDLAFFDSSD 121
Query: 199 HTILQVALVKPKPDTFVESINHLLLITTPFDIYILAISYDRISGSFNIFNTG----MSVS 254
IL+V+LV KP F I + L++ T DI + + +D + + + ++
Sbjct: 122 AAILKVSLVNIKPGVFEPEIQYGLVVGTISDICLYPV-FDFVENGASSISIDSKRCFKIA 180
Query: 255 VHGLDVHEIVYYEKTGQIFFSGNSNGTNIWELQYSSSEDWF---NNKCSKXXXXXXXXXX 311
+ G V++I Y G++F++ + ++E Y WF N+KC
Sbjct: 181 LDGATVNDI-SYTSNGRVFYTADD---QLFEFVYEKQNGWFGSTNHKC------------ 224
Query: 312 XXPTNIFSKIPGSALVQSLFEEDSKYAQEYITHLTVDQSRGILYSLSSKSVIRAYKIN-- 369
N + I G+ + F ++E + +T+D+SR I+Y L + + +
Sbjct: 225 -RGVNQTASILGTLISLPFFGS----SKEPLDQITIDKSRNIMYLLGRAGTVSVWDLGAD 279
Query: 370 ----GKSLDGPTT--IEPSYIKRIMGTTPARGAAILGNKYLXXXXXXXXXXXXXXXLFLV 423
K L P + ++I G +I K L L LV
Sbjct: 280 GAACAKFLSVPISKIAHEAHILTQFGHDETSFHSITSIKAL--------EASQSAALNLV 331
Query: 424 AITIGGVRLYFNGSVNSGSVEALRLES-----IKFPPSSVSPETIEI 465
A T GVRLYF+ S S A+ S P +SV P+ + +
Sbjct: 332 ATTAKGVRLYFSVSTGPQSTMAMFNNSGTPNERNRPQTSVRPQCLRV 378
>At1g14850 [YU] KOG1900 Nuclear pore complex Nup155 component (D Nup154 sc
Nup157/Nup170)
Length = 1461
Score = 72.8 bits (177), Expect = 4e-12
Identities = 61/249 (24%), Positives = 113/249 (44%), Gaps = 44/249 (17%)
Query: 146 IPDEILQQVSTA--EIKTNMGLFPDIERCWITVDSKLILWHYN-NPSDFQSIDDIKHTIL 202
+P ++++ +TA E G+FP+I R W +VD+ L LW ++ + I
Sbjct: 66 LPSVLIERYNTAGGEGTALCGIFPEIRRAWASVDNSLFLWRFDKRDGQCPEYSGEEQAIC 125
Query: 203 QVALVKPKPDTFVESINHLLLITTPFDIYILAI----------SYDRIS----GSFNIFN 248
V L K +P FVE+I +LL++ TP ++ ++ + Y IS + I +
Sbjct: 126 AVGLAKCRPGVFVEAIQYLLVLATPVELVLVGVCCTEGPDGRDPYAEISVQPLPDYTISS 185
Query: 249 TGMSVSVHGLDVHEIVYYEKTGQIFFSGNSNGTNIWELQYSSSEDWFNNKCSKXXXXXXX 308
G++++ V G+IF +G +I+EL Y++ W N +C K
Sbjct: 186 DGVTMT--------CVTCTNKGRIFMAGRDG--HIYELLYTTGSGW-NKRCRKVCLTAGV 234
Query: 309 XXXXXPTNIFSKIPGSALVQSLFEEDSKY-AQEYITHLTVDQSRGILYSLSSKSVIRAYK 367
GS + + + K+ A + + + VD R ILY+ + + ++AY
Sbjct: 235 --------------GSMISRWVVPNVFKFGAVDPVVEMVVDNERQILYARTEEMKLQAY- 279
Query: 368 INGKSLDGP 376
++G + +GP
Sbjct: 280 VSGPNGEGP 288
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.135 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,533,703
Number of Sequences: 60738
Number of extensions: 3439974
Number of successful extensions: 9134
Number of sequences better than 1.0e-05: 8
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 9080
Number of HSP's gapped (non-prelim): 20
length of query: 1452
length of database: 30,389,216
effective HSP length: 119
effective length of query: 1333
effective length of database: 23,161,394
effective search space: 30874138202
effective search space used: 30874138202
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)