ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV5384 check: MH A KOG0647 RNA processing and modification mRNA export protein (contains WD40 repeats)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV5384 1842207 1841095 -371
(371 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YER107c [A] KOG0647 mRNA export protein (contains WD40 repeats) 545 e-155
SPBC16A3.05c [A] KOG0647 mRNA export protein (contains WD40 repe... 364 e-100
Hs4506399 [A] KOG0647 mRNA export protein (contains WD40 repeats) 283 3e-76
At1g80670 [A] KOG0647 mRNA export protein (contains WD40 repeats) 272 7e-73
7291315 [A] KOG0647 mRNA export protein (contains WD40 repeats) 265 6e-71
CE09338 [A] KOG0647 mRNA export protein (contains WD40 repeats) 220 3e-57
Hs4757880 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD... 214 2e-55
At3g19590 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD... 199 7e-51
At1g49910 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD... 190 3e-48
7301804 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD r... 184 2e-46
CE19233 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD r... 177 3e-44
ECU06g1550 [A] KOG0647 mRNA export protein (contains WD40 repeats) 171 2e-42
SPAC23H3.08c [D] KOG1036 Mitotic spindle checkpoint protein BUB3... 168 1e-41
7291549 [A] KOG0647 mRNA export protein (contains WD40 repeats) 132 6e-31
At1g69400 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD... 120 3e-27
YOR026w [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD r... 90 6e-18
At1g15850 [A] KOG0647 mRNA export protein (contains WD40 repeats) 80 4e-15
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 70 5e-12
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 68 2e-11
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 68 2e-11
Hs14150171 [S] KOG1407 WD40 repeat protein 67 3e-11
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 66 7e-11
At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 65 2e-10
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 65 2e-10
7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 65 2e-10
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 64 3e-10
SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein 64 5e-10
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 63 6e-10
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 63 6e-10
SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein 62 1e-09
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 61 2e-09
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 60 4e-09
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 60 4e-09
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 60 4e-09
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 60 4e-09
At3g49660 [R] KOG0266 WD40 repeat-containing protein 60 4e-09
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 60 7e-09
CE06090 [T] KOG0279 G protein beta subunit-like protein 59 9e-09
At1g18080 [T] KOG0279 G protein beta subunit-like protein 59 9e-09
7290331 [R] KOG0266 WD40 repeat-containing protein 59 9e-09
YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 59 1e-08
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 59 1e-08
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 59 1e-08
At1g48630 [T] KOG0279 G protein beta subunit-like protein 59 1e-08
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 58 3e-08
CE11748 [R] KOG0266 WD40 repeat-containing protein 58 3e-08
7297305 [T] KOG0279 G protein beta subunit-like protein 58 3e-08
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 57 3e-08
At3g18130 [T] KOG0279 G protein beta subunit-like protein 57 3e-08
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 57 4e-08
CE00901 [R] KOG0266 WD40 repeat-containing protein 57 4e-08
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 57 6e-08
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 57 6e-08
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 57 6e-08
CE15742 [R] KOG0275 Conserved WD40 repeat-containing protein 57 6e-08
7290895 [R] KOG0286 G-protein beta subunit 56 7e-08
YCR084c [R] KOG0266 WD40 repeat-containing protein 56 1e-07
Hs9257257 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 56 1e-07
Hs4827056 [Z] KOG0318 WD40 repeat stress protein/actin interacti... 56 1e-07
7290304 [S] KOG0310 Conserved WD40 repeat-containing protein 56 1e-07
YJL112w [R] KOG4155 FOG: WD40 repeat 55 1e-07
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 55 1e-07
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 55 1e-07
CE25232 [S] KOG0310 Conserved WD40 repeat-containing protein 55 1e-07
Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein 55 2e-07
Hs5729852 [R] KOG0286 G-protein beta subunit 55 2e-07
Hs20336270 [R] KOG0286 G-protein beta subunit 55 2e-07
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 55 2e-07
SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18... 54 3e-07
Hs14149987 [S] KOG0269 WD40 repeat-containing protein 54 3e-07
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 54 3e-07
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 54 3e-07
At1g10580 [S] KOG0282 mRNA splicing factor 54 3e-07
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 54 3e-07
Hs11321585 [R] KOG0286 G-protein beta subunit 54 5e-07
SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subun... 53 6e-07
CE06574 [R] KOG0266 WD40 repeat-containing protein 53 6e-07
CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 53 6e-07
Hs21687048 [T] KOG0279 G protein beta subunit-like protein 53 8e-07
Hs19705568 [R] KOG0288 WD40 repeat protein TipD 53 8e-07
At3g16650 [A] KOG0285 Pleiotropic regulator 1 53 8e-07
At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein 53 8e-07
7302218 [R] KOG0302 Ribosome Assembly protein 53 8e-07
7300980 [R] KOG4155 FOG: WD40 repeat 53 8e-07
Hs22046076 [R] KOG0266 WD40 repeat-containing protein 52 1e-06
7299285 [R] KOG4155 FOG: WD40 repeat 52 1e-06
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 52 1e-06
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 52 1e-06
Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein 52 1e-06
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 52 1e-06
At4g15900 [A] KOG0285 Pleiotropic regulator 1 52 1e-06
Hs22052079 [R] KOG0266 WD40 repeat-containing protein 52 2e-06
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 52 2e-06
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 51 2e-06
Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 51 2e-06
Hs13899346 [R] KOG0302 Ribosome Assembly protein 51 2e-06
At5g56130 [S] KOG1407 WD40 repeat protein 51 2e-06
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 51 2e-06
Hs20357529 [R] KOG0286 G-protein beta subunit 51 3e-06
ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 51 3e-06
ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit ... 51 3e-06
CE28405 [S] KOG0282 mRNA splicing factor 51 3e-06
7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 51 3e-06
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 50 4e-06
CE02043 [R] KOG0289 mRNA splicing factor 50 4e-06
At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein 50 4e-06
SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1 50 5e-06
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 50 5e-06
At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 50 5e-06
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 50 7e-06
Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 50 7e-06
At5g54520 [S] KOG0282 mRNA splicing factor 50 7e-06
At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 50 7e-06
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 49 9e-06
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 49 9e-06
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 49 9e-06
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 49 9e-06
At4g34460 [R] KOG0286 G-protein beta subunit 49 9e-06
At4g33270 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 49 9e-06
At4g33260 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 49 9e-06
>YER107c [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 365
Score = 545 bits (1403), Expect = e-155
Identities = 252/367 (68%), Positives = 292/367 (78%), Gaps = 4/367 (1%)
Query: 1 MSFY-RXXXXXXXXXXXXMATEKDLANDIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSK 59
MSF+ R MA EKDLANDIV+N+ AEDSISDIAFSPQ DFMFS SSWD K
Sbjct: 1 MSFFNRSNTTSALGTSTAMANEKDLANDIVINSPAEDSISDIAFSPQQDFMFSASSWDGK 60
Query: 60 VRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQH 119
VRIWDVQ+G PQGRAQ++ +PVL TRWS DGTKVASGGCDN LK++D+ +GQ QQIG H
Sbjct: 61 VRIWDVQNGVPQGRAQHESSSPVLCTRWSNDGTKVASGGCDNALKLYDIASGQTQQIGMH 120
Query: 120 NSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQMPERVYCMDASQKLMV 179
++ ++ LRFV CGP+N ECI TGSWDKT+KYWD+R PQP+ T+ MPERVY MD Q L+V
Sbjct: 121 SAPIKVLRFVQCGPSNTECIVTGSWDKTIKYWDMRQPQPVSTVMMPERVYSMDNKQSLLV 180
Query: 180 VGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRSISCYNEGNGFAIGSIEGRCAVQYIDEQ 239
V AERHIA+I+L NP IFK + SPLKWQTR ++CYNE +G+AIGS+EGRC+++YID+
Sbjct: 181 VATAERHIAIINLANPTTIFKATTSPLKWQTRCVACYNEADGYAIGSVEGRCSIRYIDDG 240
Query: 240 EQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWD 299
Q+K GFSFKCHRQ N S VYPVNSI FHP++GTF TAGGDG+F+FWD
Sbjct: 241 MQKKSGFSFKCHRQTNPNRAPGSNGQSL---VYPVNSIAFHPLYGTFVTAGGDGTFNFWD 297
Query: 300 KNHRHRLKGFPKLNYSIPVCQFNRTGSVFAYALSYDWHQGHIGNRPDYPNVIRLHATTDE 359
KN RHRLKG+P L SIPVC FNR GSVFAYALSYDWHQGH+GNRPDYPNVIRLHATTDE
Sbjct: 298 KNQRHRLKGYPTLQASIPVCSFNRNGSVFAYALSYDWHQGHMGNRPDYPNVIRLHATTDE 357
Query: 360 EVKAKKK 366
EVK KKK
Sbjct: 358 EVKEKKK 364
>SPBC16A3.05c [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 352
Score = 364 bits (935), Expect = e-100
Identities = 180/345 (52%), Positives = 239/345 (69%), Gaps = 14/345 (4%)
Query: 23 DLANDIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQS-GSPQGRAQYDHQAP 81
DL D+ + EDSISD+AFSPQ++++ + SSWDSKVRI++VQ+ G G+A Y+HQ P
Sbjct: 18 DLKKDVEVAQPPEDSISDLAFSPQAEYL-AASSWDSKVRIYEVQATGQSIGKALYEHQGP 76
Query: 82 VLTTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIAT 141
VL+ WS DGTKVASG D KVFD+ TGQ QQ+ H+ AV+ +RFV T+ +AT
Sbjct: 77 VLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAVRCVRFVEAMGTSP-ILAT 135
Query: 142 GSWDKTVKYWDLRSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKT 201
GSWDKT+KYWDLR PI T+ +PERVY MD L+ V AER+I VI+L+ P +IFK
Sbjct: 136 GSWDKTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLTVATAERNICVINLSEPTKIFKL 195
Query: 202 SLSPLKWQTRSISCYNEGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAA 261
++SPLK+QTRS++C+ +G+G+AIGS+EGRCA+Q IDE+ ++ FSF+CHR Q N+
Sbjct: 196 AMSPLKFQTRSLACFIKGDGYAIGSVEGRCAIQNIDEKNASQN-FSFRCHRNQAGNS--- 251
Query: 262 GGRTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQF 321
VY VNSI FHP +GTF+TAG DG+F FWDK+ RLK +P + +I F
Sbjct: 252 -------ADVYSVNSIAFHPQYGTFSTAGSDGTFSFWDKDSHQRLKSYPNVGGTISCSTF 304
Query: 322 NRTGSVFAYALSYDWHQGHIGNRPDYPNVIRLHATTDEEVKAKKK 366
NRTG +FAYA+SYDW +G+ N PN I LH +E+K + K
Sbjct: 305 NRTGDIFAYAISYDWSKGYTFNNAQLPNKIMLHPVPQDEIKPRPK 349
>Hs4506399 [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 368
Score = 283 bits (724), Expect = 3e-76
Identities = 151/348 (43%), Positives = 205/348 (58%), Gaps = 19/348 (5%)
Query: 27 DIVLNNAAEDSISDIAFSPQS---DFMFSVSSWDSKVRIWDVQ-SGSPQGRAQYDHQAPV 82
DI + ++ +DSI ++FSP + +F+ + SW + VR W+VQ SG +AQ H PV
Sbjct: 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIA-GSWANDVRCWEVQDSGQTIPKAQQMHTGPV 89
Query: 83 LTTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATG 142
L WS DG+KV + CD K++D+++ QA QI QH++ V+++ ++ N C+ TG
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKA--PNYSCVMTG 147
Query: 143 SWDKTVKYWDLRSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTS 202
SWDKT+K+WD RS P+M LQ+PER YC D + VV AER + V L N F+
Sbjct: 148 SWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRI 207
Query: 203 LSPLKWQTRSISCY----NEGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNN 258
SPLK Q R ++ + N+ GFA+GSIEGR A+ YI+ KD F+FKCHR
Sbjct: 208 ESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSN---- 263
Query: 259 GAAGGRTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPV 318
G TS +Y VN I FHP+HGT AT G DG F FWDK+ R +LK +L+ I
Sbjct: 264 ---GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISA 320
Query: 319 CQFNRTGSVFAYALSYDWHQGHIGNRPDYPNVIRLHATTDEEVKAKKK 366
C FN G++FAYA SYDW +GH P N I L EE+K + K
Sbjct: 321 CCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLR-NAAEELKPRNK 367
>At1g80670 [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 349
Score = 272 bits (695), Expect = 7e-73
Identities = 140/341 (41%), Positives = 203/341 (59%), Gaps = 26/341 (7%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDV-QSGSPQG---RAQYDHQAPVLTTRWSIDG 91
DSIS ++FSP++D + + +SWD++VR W++ +SG+ +A H PVL + W DG
Sbjct: 26 DSISSLSFSPRADILVA-TSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDG 84
Query: 92 TKVASGGCDNVLKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKY 150
T V SGGCD K++ + +G Q + H + ++ ++ +ATGSWDKT+KY
Sbjct: 85 TTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIP----GMNLLATGSWDKTLKY 140
Query: 151 WDLRSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQT 210
WD R P+ T Q+P++ Y + LMVVG A+R++ V +L NP FK SPLK+QT
Sbjct: 141 WDTRQQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQT 200
Query: 211 RSISCYNEGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQ 270
R ++ + + GF +GSIEGR V ++D+ +Q K+ F+FKCHR
Sbjct: 201 RCVTAFPDQQGFLVGSIEGRVGVHHLDDSQQSKN-FTFKCHRD--------------GND 245
Query: 271 VYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQFNRTGSVFAY 330
+Y VNS+ FHP+HGTFATAG DG+F+FWDK+ + RLK + N IP FN GS++AY
Sbjct: 246 IYSVNSLNFHPVHGTFATAGSDGAFNFWDKDSKQRLKAMSRCNQPIPCSSFNHDGSIYAY 305
Query: 331 ALSYDWHQGHIGNRP-DYPNVIRLHATTDEEVKAKKKTTGT 370
A YDW +G + P + I LH + EVKAK + T
Sbjct: 306 AACYDWSKGAENHNPATAKSSIFLHLPQESEVKAKPRVGAT 346
>7291315 [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 346
Score = 265 bits (678), Expect = 6e-71
Identities = 144/342 (42%), Positives = 198/342 (57%), Gaps = 21/342 (6%)
Query: 26 NDIVLNNAAEDSISDIAFSP---QSDFMFSVSSWDSKVRIWDV-QSGSPQGRAQYDHQAP 81
ND + + +DS+S + FSP Q +F+ + SWDS VR W+V Q+G+ ++ P
Sbjct: 12 NDFEVASPPDDSVSALEFSPSTVQKNFLVA-GSWDSTVRCWEVEQNGATVPKSMKTMGGP 70
Query: 82 VLTTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIAT 141
VL WS DG+KV CD +K++D+ + Q Q+ H+ V++ V GPT C+ T
Sbjct: 71 VLDVCWSDDGSKVFVASCDKQVKLWDLASDQVMQVAAHDGPVKTCHMVK-GPT-YTCLMT 128
Query: 142 GSWDKTVKYWDLRSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKT 201
GSWDKT+K+WD RSP P+MT+ +PER YC D + VVG A R + + L N +K
Sbjct: 129 GSWDKTLKFWDTRSPNPMMTINLPERCYCADVEYPMAVVGTANRGLIIYSLQNSPTEYKR 188
Query: 202 SLSPLKWQTRSISCYN----EGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQN 257
SPLK+Q R+IS + E G A+GSIEGR A+QY++ KD F+FKCHR
Sbjct: 189 QESPLKYQHRAISIFRDKKKEPTGCALGSIEGRVAIQYVNPGNP-KDNFTFKCHR----T 243
Query: 258 NGAAGGRTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIP 317
G +G + +Y VN I FHP+HGT T G DG+F FWDK+ R +LK ++ SI
Sbjct: 244 TGTSGYQ-----DIYAVNDIAFHPVHGTLVTVGSDGTFSFWDKDARTKLKSSETMDQSIT 298
Query: 318 VCQFNRTGSVFAYALSYDWHQGHIGNRPDYPNVIRLHATTDE 359
C FN G +FAYA+ YDW +GH P I L + DE
Sbjct: 299 KCGFNANGQIFAYAVGYDWSKGHEYFNPAKKPQIFLRSCYDE 340
>CE09338 [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 373
Score = 220 bits (560), Expect = 3e-57
Identities = 123/352 (34%), Positives = 187/352 (52%), Gaps = 22/352 (6%)
Query: 26 NDIVLNNAAEDSISDIAFSP--QSDFMFSVSSWDSKVRIWDVQSGSP-QGRAQYDHQAPV 82
+D +++ A ED+I I FSP Q M + SWD +R+W + +G+AQ + AP+
Sbjct: 33 DDFLVDGAPEDTIQVIKFSPTPQDKPMLACGSWDGTIRVWMFNDANTFEGKAQQNIPAPI 92
Query: 83 LTTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATG 142
L W D +K+ D +++D+ + Q +G H+ V++ +++ N +C+ TG
Sbjct: 93 LDIAWIEDSSKIFIACADKEARLWDLASNQVAVVGTHDGPVKTCHWIN--GNNYQCLMTG 150
Query: 143 SWDKTVKYWDLRS---PQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIF 199
S+DKT+++WD+++ + +Q+PERVY D + VV +A +HI V +L N
Sbjct: 151 SFDKTLRFWDMKNLPNQTQMAQIQLPERVYAADVLYPMAVVALANKHIKVYNLENGPTEV 210
Query: 200 KTSLSPLKWQTRSISCYNEGN-----GFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQ 254
K S LK+Q R IS + + + GFA+GSIEGR AVQY+D KD F+FKCHR
Sbjct: 211 KDIESQLKFQIRCISIFKDKSNQNPAGFALGSIEGRVAVQYVDVANP-KDNFTFKCHRSA 269
Query: 255 VQNNGAAGGRTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNY 314
NG ++Y VN I FHP HGT T G DG + WDK+ R +LK
Sbjct: 270 ELVNGFQ--------EIYAVNDICFHPQHGTLVTIGSDGRYSMWDKDARTKLKTSEPHPM 321
Query: 315 SIPVCQFNRTGSVFAYALSYDWHQGHIGNRPDYPNVIRLHATTDEEVKAKKK 366
+ C + +G+ YAL YDW +GH GN ++ D + + KK
Sbjct: 322 PLTCCDVHSSGAFLVYALGYDWSRGHEGNTQPGSKIVIHKCIEDMKPRPTKK 373
>Hs4757880 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD repeat
superfamily
Length = 328
Score = 214 bits (545), Expect = 2e-55
Identities = 130/345 (37%), Positives = 181/345 (51%), Gaps = 21/345 (6%)
Query: 25 ANDIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLT 84
+N+ LN ED IS + FSP + VSSWD+ VR++DV + S R +Y H VL
Sbjct: 4 SNEFKLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSM--RLKYQHTGAVLD 61
Query: 85 TRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSW 144
+ D T SGG D+ LK+ D+ T Q +G H++ ++ + + C N + TGSW
Sbjct: 62 CAF-YDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEY--CPEVN--VMVTGSW 116
Query: 145 DKTVKYWDLRSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLS 204
D+TVK WD R+P T PE+VY + S ++VG A R + V DL N G + + S
Sbjct: 117 DQTVKLWDPRTPCNAGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRES 176
Query: 205 PLKWQTRSISCYNEGNGFAIGSIEGRCAVQYID-EQEQRKDGFSFKCHRQQVQNNGAAGG 263
LK+QTR I + G+ + SIEGR AV+Y+D E +K ++FKCHR + N
Sbjct: 177 SLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCHRLKENN------ 230
Query: 264 RTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQFNR 323
Q+YPVN+I FH IH TFAT G DG + WD ++ RL F + SI F+
Sbjct: 231 ----IEQIYPVNAISFHNIHNTFATGGSDGFVNIWDPFNKKRLCQFHRYPTSIASLAFSN 286
Query: 324 TGSVFAYALSYDWHQGHIGNRPDYPNVIRLHATTDEEVKAKKKTT 368
G+ A A SY + + D I + TD E K K T
Sbjct: 287 DGTTLAIASSYMYEMDDTEHPED---GIFIRQVTDAETKPKSPCT 328
>At3g19590 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD repeat
superfamily
Length = 354
Score = 199 bits (505), Expect = 7e-51
Identities = 132/356 (37%), Positives = 186/356 (52%), Gaps = 39/356 (10%)
Query: 30 LNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSI 89
L+N D IS++ FS SD + VSSWD +VR++DV + S +G ++ H VL +
Sbjct: 12 LSNPPSDGISNLRFSNNSDHLL-VSSWDKRVRLYDVSTNSLKG--EFLHGGAVLDCCFHD 68
Query: 90 DGTKVASGGCDNVLK-VFDVTTGQAQQIGQHNSAVQSLRFVS------------CGPTNQ 136
D + + G V + VF+V G+ +G H+ AV+ + + C T Q
Sbjct: 69 DFSGFSVGADYKVRRIVFNV--GKEDILGTHDKAVRCVEYFDFSILFFYTLCLFCDVTGQ 126
Query: 137 ECIATGSWDKTVKYWDLRSPQ-----PIMTLQMPERVYCMDASQKLMVVGMAERHIAVID 191
+ TGSWDKTVK WD R + T PERVY M +VV A RH+ + D
Sbjct: 127 --VITGSWDKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYD 184
Query: 192 LNNPGQIFKTSLSPLKWQTRSISCYNEGNGFAIGSIEGRCAVQYIDEQEQRK-DGFSFKC 250
L N Q + S LK+QTR + CY G G+A+ S+EGR A+++ D E + ++FKC
Sbjct: 185 LRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEAAQAKKYAFKC 244
Query: 251 HRQQVQNNGAAGGRTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFP 310
HR+ + GR VYPVNSI FHPI+GTFAT G DG + WD N++ RL +
Sbjct: 245 HRK------SEAGRDI----VYPVNSIAFHPIYGTFATGGCDGFVNIWDGNNKKRLYQYS 294
Query: 311 KLNYSIPVCQFNRTGSVFAYALSYDWHQGHIGNRPDYPNVIRLHATTDEEVKAKKK 366
K SI F+R G + A A SY + + G + P I + + + EVK K K
Sbjct: 295 KYPTSISALSFSRDGQLLAVASSYTFEE---GEKSQEPEAIFVRSVNEIEVKPKPK 347
>At1g49910 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD repeat
superfamily
Length = 339
Score = 190 bits (483), Expect = 3e-48
Identities = 118/343 (34%), Positives = 173/343 (50%), Gaps = 27/343 (7%)
Query: 30 LNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSI 89
L+N D IS++ FS SD + VSSWD VR++D +G ++ H VL +
Sbjct: 11 LSNPPSDGISNLRFSNNSDHLL-VSSWDKSVRLYDANGDLMRG--EFKHGGAVLDCCFHD 67
Query: 90 DGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVK 149
D + S D ++ D G+ +G H V+ + + + TGSWDKT+K
Sbjct: 68 DSSGF-SVCADTKVRRIDFNAGKEDVLGTHEKPVRCVEYSYAAGQ----VITGSWDKTIK 122
Query: 150 YWDLRSPQ-----PIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLS 204
WD R I T PERV + +VV A RH+ + DL N Q + S
Sbjct: 123 CWDPRGASGTERTQIGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDLRNMSQPEQRRES 182
Query: 205 PLKWQTRSISCYNEGNGFAIGSIEGRCAVQYIDEQEQRK-DGFSFKCHRQQVQNNGAAGG 263
LK+QTR + CY G G+A+ S+EGR ++++ D E + ++FKCHR+
Sbjct: 183 SLKYQTRCVRCYPNGTGYALSSVEGRVSMEFFDLSEAAQAKKYAFKCHRKSEDGRDI--- 239
Query: 264 RTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQFNR 323
VYPVN+I FHPI+GTFA+ G DG + WD N++ RL + K SI F+R
Sbjct: 240 -------VYPVNAIAFHPIYGTFASGGCDGFVNIWDGNNKKRLYQYSKYPTSIAALSFSR 292
Query: 324 TGSVFAYALSYDWHQGHIGNRPDYPNVIRLHATTDEEVKAKKK 366
G + A A SY + + G++P P+ I + + + EVK K K
Sbjct: 293 DGGLLAVASSYTFEE---GDKPHEPDAIFVRSVNEIEVKPKPK 332
>7301804 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD repeat
superfamily
Length = 326
Score = 184 bits (467), Expect = 2e-46
Identities = 118/342 (34%), Positives = 172/342 (49%), Gaps = 30/342 (8%)
Query: 30 LNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSI 89
LNN ED IS + F P+S+ + SSWD +R +DV + Q R ++ AP+L + +
Sbjct: 8 LNNPPEDLISAVKFGPKSNQYMAASSWDGTLRFYDVPAN--QLRQKFVQDAPLLDCAF-M 64
Query: 90 DGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVK 149
D V SG DN L++FDV T IG H ++ + I TGSWD TVK
Sbjct: 65 DIVHVVSGSLDNQLRLFDVNTQAESIIGAHEEPIRCVEHAEY----VNGILTGSWDNTVK 120
Query: 150 YWDLRSPQPIMTLQMPE-RVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKW 208
WD+R + + T + +VY M + +VV ++R + + DL S LK+
Sbjct: 121 LWDMREKRCVGTFEQNNGKVYSMSVIDEKIVVATSDRKVLIWDLRKMDSYIMKRESSLKY 180
Query: 209 QTRSISCYNEGNGFAIGSIEGRCAVQYID-EQEQRKDGFSFKCHRQQVQNNGAAGGRTST 267
QTR I + G+ + SIEGR AV+Y+D + E ++ F+FKCHR + QN
Sbjct: 181 QTRCIRLFPNKEGYVMSSIEGRVAVEYLDHDPEVQRRKFAFKCHRNREQNIE-------- 232
Query: 268 EVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQFNRTGSV 327
Q+YPVN++ FH ++ TFAT G DG + WD ++ RL F + + SI F+ GS
Sbjct: 233 --QIYPVNALSFHNVYQTFATGGSDGIVNIWDGFNKKRLCQFHEYDTSISTLNFSSDGSA 290
Query: 328 FAYALSYDWHQGHIGNRPDYP-----NVIRLHATTDEEVKAK 364
A SY + P+ P I + TD+E K K
Sbjct: 291 LAIGCSY------LDQLPETPATVPHPAIYIRYPTDQETKQK 326
>CE19233 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD repeat
superfamily
Length = 343
Score = 177 bits (448), Expect = 3e-44
Identities = 113/333 (33%), Positives = 175/333 (51%), Gaps = 21/333 (6%)
Query: 38 ISDIAFSPQSDF-MFSVSSWDSKVRIWDV-QSGSPQGRAQYDHQAPVLTTRWSIDGTKVA 95
IS + F ++ + + S WD R+++V + G + + H P+LT ++ KVA
Sbjct: 26 ISKVQFQREAGSRLLAASGWDGTCRVYEVGKLGDISEKLVFTHGKPLLTCTFA-GYNKVA 84
Query: 96 SGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
GG D+ +K+ D+ TG Q+G H AV+ + F P + I +G WD +VK WD RS
Sbjct: 85 FGGVDHNVKLADIETGNGTQLGSHALAVRCMEF---NPMSS-LIVSGGWDSSVKLWDARS 140
Query: 156 --PQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRSI 213
I ++ + VY MD + ++VG +R I + D + + SPLK+QTR++
Sbjct: 141 YGNGAIESVNVSSSVYAMDVLKHTILVGTKDRKIFMYDSRKLREPLQVRDSPLKYQTRAV 200
Query: 214 SCYNEGNGFAIGSIEGRCAVQYIDE--QEQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQV 271
+ G F + SIEGR AV+Y+D+ +E K ++FKCHR++ + TE+ +
Sbjct: 201 QFFPTGEAFVVSSIEGRVAVEYVDQSGEEMMKRKYAFKCHREKDTDG--------TEL-I 251
Query: 272 YPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQFNRTGSVFAYA 331
+PV+++ FHP +GTFAT G DG + WD +R R+ K SI FN GS A A
Sbjct: 252 HPVHTVAFHPKYGTFATGGADGIVNIWDPFNRKRIIQLHKFETSISSLSFNEDGSQLAIA 311
Query: 332 LSYDWHQGHIGNRPDYPNVIRLHATTDEEVKAK 364
SY + + I P N I + TD E + K
Sbjct: 312 TSYQYEK-EIDPSPLPNNSITIRHITDPESRPK 343
>ECU06g1550 [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 318
Score = 171 bits (433), Expect = 2e-42
Identities = 107/329 (32%), Positives = 170/329 (51%), Gaps = 31/329 (9%)
Query: 32 NAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDG 91
N D++S++AFS M + SSWD VR +D+++ + + P+LT +S +
Sbjct: 13 NPPSDTVSEVAFSQMHGLM-AASSWDGTVRTYDLENLYSPNTSVVNLNKPLLTCCFSKET 71
Query: 92 TKVA-SGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKY 150
+A +G D L++ D+ T Q HN+ V+S+R S + TGSWDKTVK+
Sbjct: 72 PSLAFAGAADGSLQIVDLQTSQVSSFQAHNAGVRSVRCFS------NMLVTGSWDKTVKF 125
Query: 151 WDLRSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQT 210
WD RS + + +L +P +VY MD ++++ + ++ +A +LN+ Q KT S L W
Sbjct: 126 WDTRSSKLVFSLDLPGKVYAMDLEKEMLAMSLSGNEVATYNLNDINQ-KKTHASKLNWMI 184
Query: 211 RSISCYNEGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQ 270
RSI+C + FA+G IEG+ + I+ ++ F+CHR + +
Sbjct: 185 RSIACAQDNETFALGGIEGKAEIFNINSPVKK---MIFRCHR--------------VDNK 227
Query: 271 VYPVNSIVFHPI-HGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVC-QFNRTGSVF 328
VY VNS+ F P H TAGGDG+ F+D + R+K F + C +FN +GS +
Sbjct: 228 VYAVNSVSFLPTNHNILVTAGGDGTIVFFDA--QARMKIFTQTESQPVTCGRFNTSGSYY 285
Query: 329 AYALSYDWHQGHIGN-RPDYPNVIRLHAT 356
YA DW G++ RP I++ T
Sbjct: 286 VYATGNDWSAGYVTTYRPTQLRAIQVSTT 314
>SPAC23H3.08c [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD repeat
superfamily
Length = 320
Score = 168 bits (426), Expect = 1e-41
Identities = 97/299 (32%), Positives = 150/299 (49%), Gaps = 17/299 (5%)
Query: 34 AEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTK 93
++D IS + FSP WD + + + S +P+ +YD +P+L+ ++ + T
Sbjct: 11 SKDGISSVIFSPSVKNELIAGCWDGSLLHYQI-SENPELLGKYDLSSPILSLEYTDEKTA 69
Query: 94 VASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
+ G D + D+ T + +G H V + + + C +GSWDK+ + WD+
Sbjct: 70 LV-GNLDGTVTTLDLNTRNHEFLGNHGKGVSCISKLRL----ENCFISGSWDKSFRVWDV 124
Query: 154 RSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRSI 213
R QP+ + ++++ + ++V+G +ER V D+ N F+ S K+ TRS+
Sbjct: 125 RVKQPVEGQDIGKKIFASSSRDNILVLGCSERENLVYDIRNLKLPFQRRPSSFKYMTRSV 184
Query: 214 SCYNEGNGFAIGSIEGRCAVQYID-EQEQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQVY 272
C GF SIEGR +V+YI+ QE + F+FKCHRQ ++ VY
Sbjct: 185 CCNQNFEGFVSSSIEGRTSVEYINPSQEAQSKNFTFKCHRQIQKDYDI----------VY 234
Query: 273 PVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQFNRTGSVFAYA 331
PVN + FHPIH T ATAGGDG FWD R RL+ +I FN GS+ A A
Sbjct: 235 PVNDLKFHPIHQTLATAGGDGVVAFWDIQVRKRLRVLNPSKINISSISFNVDGSMLAIA 293
>7291549 [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 336
Score = 132 bits (333), Expect = 6e-31
Identities = 91/320 (28%), Positives = 144/320 (44%), Gaps = 25/320 (7%)
Query: 27 DIVLNNAAEDSISDIAFSPQSDFMFSV--SSWDSKVRIWDVQSGSPQGRAQYDHQAPVLT 84
D L N D+IS + FSP+S ++ SWD+ VRIW+VQ+ + +
Sbjct: 14 DYELPNPPNDTISALEFSPRSSSWNAICAGSWDNTVRIWEVQADRLVPKVMNSLEGTPFD 73
Query: 85 TRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSW 144
W+ G KV + +D+ + Q +++G H A ++ +V GP +AT SW
Sbjct: 74 VTWNDSGNKVYLSDSSGQVTEWDLESNQLRKVGLHARAARTCHWV--GPY----LATTSW 127
Query: 145 DKTVKYWDLRSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLS 204
DK++++WD R+ + +++P+R Y D + VV +R I L S
Sbjct: 128 DKSIRFWDPRAAIELTRMELPDRSYAADVLNDVAVVACGDRSILAYTLRGGPVEQGRMKS 187
Query: 205 P--LKWQTRSISCYNEGN--GFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGA 260
P Q RS++ + + + I G + + R F +CHR+ +N+G
Sbjct: 188 PGESNTQVRSVALHQNRDLTSWLIAKTNG---MVFDQSMAHRTVSFPIRCHRR--ENSGI 242
Query: 261 AGGRTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQ 320
+ VY VN + + + AT G DG F FWD R +L I C
Sbjct: 243 --------LDVYAVNEVKVNMVTQHIATVGSDGVFCFWDSQMRSKLLESKVHPQPITKCA 294
Query: 321 FNRTGSVFAYALSYDWHQGH 340
+ G +FAYAL YDW +GH
Sbjct: 295 ISGDGKLFAYALGYDWSKGH 314
>At1g69400 [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD repeat
superfamily
Length = 315
Score = 120 bits (301), Expect = 3e-27
Identities = 88/307 (28%), Positives = 151/307 (48%), Gaps = 20/307 (6%)
Query: 32 NAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDG 91
N ED++S + FSPQS+ + V+SWDS +R++DV+S S + + QA +L + +
Sbjct: 10 NPIEDAVSRLRFSPQSNNLL-VASWDSYLRLYDVESSSLS--LELNSQAALLDCCFENES 66
Query: 92 TKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYW 151
T SG D ++ +D+ G IG+H+ S+ + E I+TG +D+ +K+W
Sbjct: 67 TSFTSGS-DGFIRRYDLNAGTVDTIGRHDDISTSIVY---SYEKGEVISTG-FDEKIKFW 121
Query: 152 DLRSPQPIM-TLQMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQT 210
D R + ++ + V C+ S +VV + + + DL N + F++ S ++
Sbjct: 122 DTRQRESLVFSTDAGGAVGCVTVSGNNLVV-CVDASMHIYDLRNLDEAFQSYASQVEVPI 180
Query: 211 RSISCYNEGN-GFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAAGGRTSTEV 269
R I+ G+A+GS++GR AV + + + +SF+CH + NG G +
Sbjct: 181 RCITSVPYSRAGYAVGSVDGRVAVDFPNTSCSSEIKYSFRCHPKS--RNGRLDGVCINAI 238
Query: 270 QVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQFNRTGSVFA 329
+ P S GTF T +G W+ R RL P+ + SI F+ TG + A
Sbjct: 239 EFSPCGS-------GTFVTGDNEGYVISWNAKSRRRLNELPRYSNSIASLAFDHTGELLA 291
Query: 330 YALSYDW 336
A S+ +
Sbjct: 292 IASSHTY 298
>YOR026w [D] KOG1036 Mitotic spindle checkpoint protein BUB3 WD repeat
superfamily
Length = 341
Score = 89.7 bits (221), Expect = 6e-18
Identities = 79/308 (25%), Positives = 139/308 (44%), Gaps = 40/308 (12%)
Query: 28 IVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIW--DVQSGSPQGRAQYDHQAPVLTT 85
+ + A +D ISDI P + ++SWD + ++ D+Q+ + ++ P+L
Sbjct: 4 VQIEQAPKDYISDIKIIPSKSLLL-ITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCC 62
Query: 86 RWSIDGT--KVASGGCDN-VLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATG 142
+ ID T ++ G +LKV + + Q + + + + R G + +
Sbjct: 63 NF-IDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG---DDKLIAA 118
Query: 143 SWDKTVKYWDLRSPQPIM---------TLQMPERVYCMDASQKLMVVGMAERHIAVIDL- 192
SWD ++ D R+ + ++ +++ MD + ++VGM + L
Sbjct: 119 SWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178
Query: 193 ---NNPGQIFKTSLSPLKWQTRSISCY-NEGNGFAIGSIEGRCAVQYIDEQEQRKDG--- 245
++ G I + S LK+Q R ++ E G+A SI+GR AV++ D+Q +
Sbjct: 179 LCEDDNGTIEE---SGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKR 235
Query: 246 FSFKCHRQQVQNNGAAGGRTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHR 305
F+F+CHR +++ A YPVNSI F P H TAG DG W+ R +
Sbjct: 236 FAFRCHRLNLKDTNLA----------YPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285
Query: 306 LKGFPKLN 313
+K F K N
Sbjct: 286 IKNFAKFN 293
>At1g15850 [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 140
Score = 80.5 bits (197), Expect = 4e-15
Identities = 42/129 (32%), Positives = 70/129 (53%), Gaps = 10/129 (7%)
Query: 26 NDIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQ----SGSPQGRAQYDHQAP 81
N + A DSIS ++FSP++D + + +SWD +VR W++ S + + + H P
Sbjct: 17 NSYEITPPATDSISSLSFSPKADILVA-TSWDCQVRCWEITRSDGSIASEPKVSMSHDQP 75
Query: 82 VLTTRWSIDGTKVASGGCDNVLKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQECIA 140
VL + W DGT V +GGCD K++ + +G Q + H++ + ++ +
Sbjct: 76 VLCSAWKDDGTTVFTGGCDKQAKMWPLLSGAQPSTVAMHDAPFNQIAWI----PGMNLLV 131
Query: 141 TGSWDKTVK 149
TGSWDKT+K
Sbjct: 132 TGSWDKTLK 140
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 70.1 bits (170), Expect = 5e-12
Identities = 49/135 (36%), Positives = 77/135 (56%), Gaps = 12/135 (8%)
Query: 39 SDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQY--DHQAPVLTTRWSIDGTKVAS 96
S + F P +F+ S SS D+ ++IWD++ +G Q H + T R++ DG V S
Sbjct: 134 SAVEFHPFGEFLASGSS-DANLKIWDIRK---KGCIQTYKGHSRGISTIRFTPDGRWVVS 189
Query: 97 GGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
GG DNV+KV+D+T G+ + H ++SL F + +ATGS D+TVK+WDL +
Sbjct: 190 GGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPL----EFLLATGSADRTVKFWDLET 245
Query: 156 PQPIMTLQMPERVYC 170
+ I + + PE + C
Sbjct: 246 FELIGSTR-PEVLAC 259
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 68.2 bits (165), Expect = 2e-11
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 11/126 (8%)
Query: 39 SDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQY--DHQAPVLTTRWSIDGTKVAS 96
S + F P +F+ S SS D+ +R+WD + +G Q H + T +S DG V S
Sbjct: 53 SAVEFHPFGEFLASGSS-DTNLRVWDTRK---KGCIQTYKGHTRGISTIEFSPDGRWVVS 108
Query: 97 GGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
GG DNV+KV+D+T G+ + H ++SL F + +ATGS D+TVK+WDL +
Sbjct: 109 GGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPL----EFLLATGSADRTVKFWDLET 164
Query: 156 PQPIMT 161
+ I T
Sbjct: 165 FELIGT 170
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 67.8 bits (164), Expect = 2e-11
Identities = 42/116 (36%), Positives = 64/116 (54%), Gaps = 7/116 (6%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCD 100
+ F P +F F+ S D+ ++IWD++ H V R++ DG + SGG D
Sbjct: 200 VNFHPFGEF-FASGSLDTNLKIWDIRKKGCI-HTYKGHTRGVNVLRFTPDGRWIVSGGED 257
Query: 101 NVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
NV+KV+D+T G+ + H +QSL F ++ +ATGS DKTVK+WDL +
Sbjct: 258 NVVKVWDLTAGKLLHEFKSHEGKIQSLDF----HPHEFLLATGSADKTVKFWDLET 309
>Hs14150171 [S] KOG1407 WD40 repeat protein
Length = 351
Score = 67.4 bits (163), Expect = 3e-11
Identities = 66/286 (23%), Positives = 115/286 (40%), Gaps = 33/286 (11%)
Query: 52 SVSSWDSK--VRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVT 109
SVSS S+ + + ++ G + R H A V + WS DG ++ASG D VF +
Sbjct: 26 SVSSGPSRYVLGMQELFRGHSKTREFLAHSAKVHSVAWSCDGRRLASGSFDKTASVFLLE 85
Query: 110 TGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQMP-ERV 168
+ + + S+ + P+N + T S DKT++ WD+R+ + I T+ E +
Sbjct: 86 KDRLVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENI 145
Query: 169 -YCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRSISCYNEGNGFAIGSI 227
C + + VG + + ID + K++ IS N+ N F +
Sbjct: 146 NICWSPDGQTIAVGNKDDVVTFIDAKTHR---SKAEEQFKFEVNEISWNNDNNMFFL--T 200
Query: 228 EGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQVYPVNSIV--FHPIHGT 285
G + + E + VQ+ + +P N I F P+
Sbjct: 201 NGNGCINILSYPELK-----------PVQS-----------INAHPSNCICIKFDPMGKY 238
Query: 286 FATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQFNRTGSVFAYA 331
FAT D WD + ++ F +L++ + F+ G + A A
Sbjct: 239 FATGSADALVSLWDVDELVCVRCFSRLDWPVRTLSFSHDGKMLASA 284
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 66.2 bits (160), Expect = 7e-11
Identities = 41/116 (35%), Positives = 64/116 (54%), Gaps = 7/116 (6%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCD 100
+ F P +F F+ S D+ ++IWD++ H V R++ DG V SGG D
Sbjct: 107 VDFHPFGEF-FASGSLDTNLKIWDIRKKGCI-HTYKGHTRGVNVLRFTPDGRWVVSGGED 164
Query: 101 NVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
N++KV+D+T G+ + H +QSL F ++ +ATGS D+TVK+WDL +
Sbjct: 165 NIVKVWDLTAGKLLTEFKSHEGQIQSLDF----HPHEFLLATGSADRTVKFWDLET 216
>At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 343
Score = 65.1 bits (157), Expect = 2e-10
Identities = 72/305 (23%), Positives = 124/305 (40%), Gaps = 33/305 (10%)
Query: 28 IVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW 87
I+L + ++ + F+P + S S D ++ +W V H+ +L W
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIAS-GSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHW 104
Query: 88 SIDGTKVASGGCDNVLKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQ--ECIATGSW 144
+ DG+++ S D ++ +DV TG Q +++ +H+S V SC PT + I +GS
Sbjct: 105 TSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVN-----SCCPTRRGPPLIISGSD 159
Query: 145 DKTVKYWDLRSPQPIMTLQMPERVYCM---DASQKLMVVGMAERHIAVIDLNNPGQIFKT 201
D T K WD+R I T ++ + DA+ K+ G+ + + V DL G+ T
Sbjct: 160 DGTAKLWDMRQRGAIQTFPDKYQITAVSFSDAADKIFTGGV-DNDVKVWDLRK-GEATMT 217
Query: 202 SLSPLKWQTRSISCYNEGNGFAIGSIEGR-CAVQYIDEQEQRKDGFSFKCHRQQVQNNGA 260
L + +S +G+ ++ + C Q + F+ H+ + N
Sbjct: 218 -LEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKN-- 274
Query: 261 AGGRTSTEVQVYPVNSIVFHPIHGTFATAG-GDGSFHFWDKNHRHRLKGFPKLNYSIPVC 319
+ + P GT TAG D H WD R + P S+ C
Sbjct: 275 -------------LLKCSWSP-DGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNEC 320
Query: 320 QFNRT 324
F+ T
Sbjct: 321 VFHPT 325
Score = 53.1 bits (126), Expect = 6e-07
Identities = 29/112 (25%), Positives = 58/112 (50%), Gaps = 9/112 (8%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRA-------QYDHQAPVLTTRW 87
+D+I+ ++ SP ++ + + D+K+ +WD++ +PQ R Q++ + +L W
Sbjct: 222 QDTITGMSLSPDGSYLLT-NGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSW 280
Query: 88 SIDGTKVASGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQEC 138
S DGTKV +G D ++ ++D T+ + ++ H +V F P C
Sbjct: 281 SPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPIIGSC 332
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 65.1 bits (157), Expect = 2e-10
Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 7/161 (4%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
E I F P+ + + S S +D ++ IW V A H V+ ++ DG+ +
Sbjct: 55 EGEIFTAEFHPEGELLLS-SGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHI 113
Query: 95 ASGGCDNVLKVFDVTTGQAQ-QIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
+ D L +D+ TGQ Q + H + V S++ G Q+ + +GS D+T+K WD
Sbjct: 114 FTCSTDKTLAFWDIATGQRQRRFKGHGNFVNSVQGSRRG---QQLLCSGSDDRTIKIWDA 170
Query: 154 RSPQPIMTLQMPERV--YCMDASQKLMVVGMAERHIAVIDL 192
R TL+ P +V C + + ++ G + + + D+
Sbjct: 171 RKKHAAHTLESPFQVTAVCFGDTGEQVISGGIDNEVKIWDI 211
Score = 55.1 bits (131), Expect = 2e-07
Identities = 37/136 (27%), Positives = 71/136 (52%), Gaps = 15/136 (11%)
Query: 23 DLANDIVLNNAA--EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRA------ 74
D+ VL++ D+I+ ++ SP+ DF+ + ++ D+ +R+WDV+ +P R
Sbjct: 210 DIRKQAVLHHLRGHSDTITGMSLSPEGDFILT-NAMDNTLRVWDVRPYAPGERCVKVFQG 268
Query: 75 -QYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCG 132
Q++ + +L WS K+ SG D + ++DV T + ++ HN +V ++ F
Sbjct: 269 HQHNFEKNLLRCAWSPGSDKITSGSADRHVYIWDVNTRRILYKLPGHNGSVNAVDF---- 324
Query: 133 PTNQECIATGSWDKTV 148
+ I +GS DKT+
Sbjct: 325 SPKEPLILSGSSDKTL 340
>7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 553
Score = 64.7 bits (156), Expect = 2e-10
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+S +AF P F+ + + +DS R+WD++ + + Q H PV + DG+ + +G
Sbjct: 356 VSKVAFHPSGRFL-ATACYDSSWRLWDLEQKT-EVLHQEGHAKPVHCLSYHSDGSVLVTG 413
Query: 98 GCDNVLKVFDVTTGQAQQIGQ-HNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSP 156
G D +V+D+ TG+ + H AV + F N IATGS D T K WDLR
Sbjct: 414 GLDAFGRVWDLRTGRCIMFLEGHLGAVFGVDF----SPNGFHIATGSQDNTCKIWDLRRR 469
Query: 157 QPIMTL 162
QP+ T+
Sbjct: 470 QPVYTI 475
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 64.3 bits (155), Expect = 3e-10
Identities = 48/174 (27%), Positives = 79/174 (44%), Gaps = 8/174 (4%)
Query: 42 AFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDN 101
AF+P + + D+ RIWD + +P + H VL WS DG +A+G DN
Sbjct: 150 AFAPHTSSRMVTGAGDNTARIWDCDTQTPMHTLK-GHYNWVLCVSWSPDGEVIATGSMDN 208
Query: 102 VLKVFDVTTGQ--AQQIGQHNSAVQSLRFVS---CGPTNQECIATGSWDKTVKYWDLRSP 156
++++D +GQ + H+ + SL + P ++ +A+ S D T+K WD S
Sbjct: 209 TIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSR 268
Query: 157 QPIMTLQ-MPERVYCMD-ASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKW 208
T+ V C+ Q L+ G +R + V D+N+ G+ S W
Sbjct: 269 VCQYTMSGHTNSVSCVKWGGQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHW 322
>SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein
Length = 314
Score = 63.5 bits (153), Expect = 5e-10
Identities = 41/120 (34%), Positives = 62/120 (51%), Gaps = 6/120 (5%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+SD A S S + S +SWD +R+WD++ G + H + VL+ S D +V SG
Sbjct: 66 VSDCALSFDSHYALS-ASWDKTIRLWDLEKGECTHQF-VGHTSDVLSVSISPDNRQVVSG 123
Query: 98 GCDNVLKVFDVTTGQAQQI--GQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
D +K++++ I G H+ V +RF S P N ++ G WDK VK WDL +
Sbjct: 124 SRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRF-SPNPDNLTFVSAG-WDKAVKVWDLET 181
Score = 50.1 bits (118), Expect = 5e-06
Identities = 37/133 (27%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 29 VLNNAAEDSISDIAFSPQSDFMFSVSS-WDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW 87
+ + D +S + FSP D + VS+ WD V++WD+++ S + + Y H V
Sbjct: 142 ITDGGHSDWVSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFSLR-TSHYGHTGYVSAVTI 200
Query: 88 SIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQ-ECIATGSWDK 146
S DG+ ASGG D L ++D+ + + + +L F P C ATGS
Sbjct: 201 SPDGSLCASGGRDGTLMLWDLNESTHLYSLEAKANINALVF---SPNRYWLCAATGS--- 254
Query: 147 TVKYWDLRSPQPI 159
+++ +DL + + +
Sbjct: 255 SIRIFDLETQEKV 267
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 63.2 bits (152), Expect = 6e-10
Identities = 48/170 (28%), Positives = 85/170 (49%), Gaps = 11/170 (6%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVA 95
+++S + FSP +++ S SS D + IW G + + Y H + WS D +++
Sbjct: 42 EAVSSVKFSPNGEWLAS-SSADRLIIIWGAYDGKYE-KTLYGHNLEISDVAWSSDSSRLV 99
Query: 96 SGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
S D LK++DV +G+ + + H++ V F P+N I +GS+D+TVK W+++
Sbjct: 100 SASDDKTLKLWDVRSGKCLKTLKGHSNYVFCCNFNP--PSN--LIISGSFDETVKIWEVK 155
Query: 155 SPQPIMTLQM---PERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKT 201
+ + + TL P + S L+V G + + D + GQ KT
Sbjct: 156 TGKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGLCRIWDAAS-GQCLKT 204
Score = 53.5 bits (127), Expect = 5e-07
Identities = 35/132 (26%), Positives = 60/132 (44%), Gaps = 1/132 (0%)
Query: 32 NAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDG 91
+A D +S + F+ + S S+D RIWD SG D PV ++S +G
Sbjct: 164 SAHSDPVSAVHFNCSGSLIVS-GSYDGLCRIWDAASGQCLKTLVDDDNPPVSFVKFSPNG 222
Query: 92 TKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYW 151
+ + DN LK++D + G+ + + F + T + I +GS D V W
Sbjct: 223 KYILTATLDNTLKLWDYSRGRCLKTYTGQKNEKYCIFANFSVTGGKWIVSGSEDNLVYIW 282
Query: 152 DLRSPQPIMTLQ 163
+L++ + + LQ
Sbjct: 283 NLQTKEIVQKLQ 294
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 63.2 bits (152), Expect = 6e-10
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 14/125 (11%)
Query: 43 FSPQSDFMFSVS-SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDN 101
+S Q D + VS S D+ +R+WDV++G+ + HQ+ LT+ + + SG D+
Sbjct: 1159 YSLQFDGLHVVSGSLDTSIRVWDVETGNCK-HTLMGHQS--LTSGMELRQNILVSGNADS 1215
Query: 102 VLKVFDVTTGQAQQI----GQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQ 157
+KV+D+TTGQ Q +H+SAV L+F N + T S D TVK WD+++
Sbjct: 1216 TVKVWDITTGQCLQTLSGPNKHHSAVTCLQF------NSRFVVTSSDDGTVKLWDVKTGD 1269
Query: 158 PIMTL 162
I L
Sbjct: 1270 FIRNL 1274
Score = 49.3 bits (116), Expect = 9e-06
Identities = 40/140 (28%), Positives = 63/140 (44%), Gaps = 11/140 (7%)
Query: 55 SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTR-WSIDGTKVASGGCDNVLKVFDVTTGQA 113
S D +++WD+ SG+ + Q T R + G+KV SG D L+V+D+ G
Sbjct: 1052 STDRTLKVWDMDSGA----CVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQGSC 1107
Query: 114 QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQ-MPERVYCMD 172
+ V L V C + + I +G++D VK W + + TLQ RVY +
Sbjct: 1108 LHV-----LVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQ 1162
Query: 173 ASQKLMVVGMAERHIAVIDL 192
+V G + I V D+
Sbjct: 1163 FDGLHVVSGSLDTSIRVWDV 1182
>SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 297
Score = 62.4 bits (150), Expect = 1e-09
Identities = 45/168 (26%), Positives = 90/168 (52%), Gaps = 12/168 (7%)
Query: 30 LNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSP-QGRAQYDHQAPVLTTRWS 88
L++ A++ I+ + ++ ++ + + + VR+W+V+SG+ A + H+ +L
Sbjct: 9 LSSKAKEPINVVKYNRTGKYVLAAGN-ERVVRLWNVKSGACIHEYAGHGHE--ILDLDLV 65
Query: 89 IDGTKVASGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKT 147
D TK AS G D ++V+DV TG+ +++G H + + ++R+ + +A+GS+D
Sbjct: 66 YDSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRY----NEDSSILASGSFDSK 121
Query: 148 VKYWDLRSP--QPIMTL-QMPERVYCMDASQKLMVVGMAERHIAVIDL 192
V+ WD RS PI L + V +D ++ L+V G + + D+
Sbjct: 122 VRLWDCRSNSFSPIQVLADAKDSVSSIDIAEHLIVTGSTDGTLRTYDI 169
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 61.2 bits (147), Expect = 2e-09
Identities = 47/181 (25%), Positives = 87/181 (47%), Gaps = 24/181 (13%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCD 100
++F+PQS + + S D+ ++WD+Q+G + H A +++ ++ G ++ +G D
Sbjct: 100 LSFNPQSTLV-ATGSMDTTAKLWDIQNGEEVYTLR-GHSAEIISLSFNTSGDRIITGSFD 157
Query: 101 NVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQEC--IATGSWDKTVKYWDLRSPQP 158
+ + V+D TG+ + N + +S N +C I TGS DKT K WD + +
Sbjct: 158 HTVVVWDADTGR-----KVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKC 212
Query: 159 IMTLQMPERVY---CMDASQKLMVVGMAE-----------RHIAVIDLNNPGQIFKTSLS 204
+ TL + C D + KL+ A+ + IA ++ + G+I K S +
Sbjct: 213 VATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKLE-GHEGEISKISFN 271
Query: 205 P 205
P
Sbjct: 272 P 272
Score = 50.1 bits (118), Expect = 5e-06
Identities = 66/296 (22%), Positives = 115/296 (38%), Gaps = 43/296 (14%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCD 100
IAF+ + S+D ++W V++G + H A ++ ++ T VA+G D
Sbjct: 57 IAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFR-GHTAEIVCLSFNPQSTLVATGSMD 115
Query: 101 NVLKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPI 159
K++D+ G + + H++ + SL F + G + I TGS+D TV WD + + +
Sbjct: 116 TTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSG----DRIITGSFDHTVVVWDADTGRKV 171
Query: 160 MTL-----QMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRSI- 213
L ++ + D S L++ G ++ + D N G+ T L I
Sbjct: 172 NILIGHCAEISSASFNWDCS--LILTGSMDKTCKLWDATN-GKCVAT----LTGHDDEIL 224
Query: 214 -SCYN-EGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQV 271
SC++ G A S +G + FS + + G G
Sbjct: 225 DSCFDYTGKLIATASADGTARI------------FSAATRKCIAKLEGHEG--------- 263
Query: 272 YPVNSIVFHPIHGTFATAGGDGSFHFWDKNHRHRLKGFPKLNYSIPVCQFNRTGSV 327
++ I F+P T D + WD L+ I C FN G++
Sbjct: 264 -EISKISFNPQGNHLLTGSSDKTARIWDAQTGQCLQVLEGHTDEIFSCAFNYKGNI 318
Score = 49.3 bits (116), Expect = 9e-06
Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 5/114 (4%)
Query: 51 FSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTT 110
F S+D ++WD SG + + G K+A+G D K++ V T
Sbjct: 24 FITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVET 83
Query: 111 GQAQQIGQ-HNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQ 163
G+ + H + + L F +ATGS D T K WD+++ + + TL+
Sbjct: 84 GKCYHTFRGHTAEIVCLSF----NPQSTLVATGSMDTTAKLWDIQNGEEVYTLR 133
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 60.5 bits (145), Expect = 4e-09
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 14/125 (11%)
Query: 43 FSPQSDFMFSVS-SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDN 101
+S Q D + VS S D+ +R+WDV++G+ HQ+ LT+ + + SG D+
Sbjct: 545 YSLQFDGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQS--LTSGMELKDNILVSGNADS 601
Query: 102 VLKVFDVTTGQAQQIGQ----HNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQ 157
+K++D+ TGQ Q Q H SAV L+F N+ + T S D TVK WDL++ +
Sbjct: 602 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF------NKNFVITSSDDGTVKLWDLKTGE 655
Query: 158 PIMTL 162
I L
Sbjct: 656 FIRNL 660
Score = 52.0 bits (123), Expect = 1e-06
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 55 SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQA- 113
++D V++WD ++ + Q H V + ++ DG V SG D ++V+DV TG
Sbjct: 518 AYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 574
Query: 114 QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQMPER----VY 169
+ H S + + +G+ D TVK WD+++ Q + TLQ P + V
Sbjct: 575 HTLTGHQSLTSGMEL------KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 628
Query: 170 CMDASQKLMVVGMAERHIAVIDL 192
C+ ++ ++ + + + DL
Sbjct: 629 CLQFNKNFVITSSDDGTVKLWDL 651
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 60.5 bits (145), Expect = 4e-09
Identities = 44/125 (35%), Positives = 67/125 (53%), Gaps = 14/125 (11%)
Query: 43 FSPQSDFMFSVS-SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDN 101
+S Q D + VS S D+ +R+WDV++G+ HQ+ LT+ + + SG D+
Sbjct: 465 YSLQFDGIHVVSGSLDTSIRVWDVETGNCI-HTLTGHQS--LTSGMELKDNILVSGNADS 521
Query: 102 VLKVFDVTTGQAQQIGQ----HNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQ 157
+K++D+ TGQ Q Q H SAV L+F N+ + T S D TVK WDL++ +
Sbjct: 522 TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQF------NKNFVITSSDDGTVKLWDLKTGE 575
Query: 158 PIMTL 162
I L
Sbjct: 576 FIRNL 580
Score = 52.0 bits (123), Expect = 1e-06
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 14/143 (9%)
Query: 55 SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQA- 113
++D V++WD ++ + Q H V + ++ DG V SG D ++V+DV TG
Sbjct: 438 AYDFMVKVWDPETETCLHTLQ-GHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCI 494
Query: 114 QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQMPER----VY 169
+ H S + + +G+ D TVK WD+++ Q + TLQ P + V
Sbjct: 495 HTLTGHQSLTSGMEL------KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVT 548
Query: 170 CMDASQKLMVVGMAERHIAVIDL 192
C+ ++ ++ + + + DL
Sbjct: 549 CLQFNKNFVITSSDDGTVKLWDL 571
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 60.5 bits (145), Expect = 4e-09
Identities = 45/177 (25%), Positives = 89/177 (49%), Gaps = 17/177 (9%)
Query: 55 SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQA- 113
S D+ +R+WDV+SG + H A V ++ DGT V SGG D +K+++ TG+
Sbjct: 353 SRDTTLRVWDVESGRHLATL-HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCI 409
Query: 114 QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQMPERVYCMDA 173
+ + HN+ V SL F S + + +GS D +++ WD P+ + + + + +
Sbjct: 410 RTLTGHNNRVYSLLFES----ERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 465
Query: 174 SQKL----MVVGMAERHIAVIDLNNPGQI-----FKTSLSPLKWQTRSISCYNEGNG 221
+L +V A+ H+ V D++ + +++++ L+W R++ + +G
Sbjct: 466 GMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDG 522
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 60.5 bits (145), Expect = 4e-09
Identities = 45/177 (25%), Positives = 89/177 (49%), Gaps = 17/177 (9%)
Query: 55 SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQA- 113
S D+ +R+WDV+SG + H A V ++ DGT V SGG D +K+++ TG+
Sbjct: 355 SRDTTLRVWDVESGRHLATL-HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCI 411
Query: 114 QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQMPERVYCMDA 173
+ + HN+ V SL F S + + +GS D +++ WD P+ + + + + +
Sbjct: 412 RTLTGHNNRVYSLLFES----ERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTS 467
Query: 174 SQKL----MVVGMAERHIAVIDLNNPGQI-----FKTSLSPLKWQTRSISCYNEGNG 221
+L +V A+ H+ V D++ + +++++ L+W R++ + +G
Sbjct: 468 GMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAITSLQWFGRNMVATSSDDG 524
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 60.5 bits (145), Expect = 4e-09
Identities = 53/199 (26%), Positives = 94/199 (46%), Gaps = 22/199 (11%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCD 100
+ F+PQS+ + S S+D VRIWDV +G + H PV ++ DG+ + S D
Sbjct: 119 VNFNPQSNMIVS-GSFDETVRIWDVTTGKCL-KVLPAHSDPVTAVDFNRDGSLIVSSSYD 176
Query: 101 NVLKVFDVTTGQAQQ--IGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQP 158
+ +++D TG + I N V +RF N + I G+ D T++ W++ S +
Sbjct: 177 GLCRIWDSGTGHCVKTLIDDENPPVSFVRF----SPNGKFILVGTLDNTLRLWNISSAKF 232
Query: 159 IMTLQ-MPERVYCMDA-----SQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTR- 211
+ T YC+ + + K +V G + + + +LN+ K L L+ T
Sbjct: 233 LKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNS-----KKLLQKLEGHTET 287
Query: 212 --SISCYNEGNGFAIGSIE 228
+++C+ N A GS++
Sbjct: 288 VMNVACHPTENLIASGSLD 306
Score = 57.0 bits (136), Expect = 4e-08
Identities = 48/197 (24%), Positives = 90/197 (45%), Gaps = 12/197 (6%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
E+ ISD+AFS + F+ S S D +++WDV++GS + H ++ +
Sbjct: 71 ENGISDVAFSSDARFIVSASD-DKTLKLWDVETGS-LIKTLIGHTNYAFCVNFNPQSNMI 128
Query: 95 ASGGCDNVLKVFDVTTGQAQQI-GQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
SG D ++++DVTTG+ ++ H+ V ++ F G I + S+D + WD
Sbjct: 129 VSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDG----SLIVSSSYDGLCRIWDS 184
Query: 154 RSPQPIMTL----QMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQ 209
+ + TL P + K ++VG + + + ++++ + KT + Q
Sbjct: 185 GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISS-AKFLKTYTGHVNAQ 243
Query: 210 TRSISCYNEGNGFAIGS 226
S ++ NG I S
Sbjct: 244 YCISSAFSVTNGKRIVS 260
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 59.7 bits (143), Expect = 7e-09
Identities = 37/116 (31%), Positives = 63/116 (53%), Gaps = 7/116 (6%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCD 100
+ F P S+++ + S D VR+W Q G+ R H+ PVL+ +S +G +AS G D
Sbjct: 432 VKFHPNSNYL-ATGSTDKTVRLWSAQQGNSV-RLFTGHRGPVLSLAFSPNGKYLASAGED 489
Query: 101 NVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
LK++D+ +G +++ H + SL F + IA+ S D +V+ WD+R+
Sbjct: 490 QRLKLWDLASGTLYKELRGHTDNITSLTF----SPDSGLIASASMDNSVRVWDIRN 541
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 59.3 bits (142), Expect = 9e-09
Identities = 37/119 (31%), Positives = 57/119 (47%), Gaps = 8/119 (6%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+SD+ S F S SWD +R+WD+ G R H VL+ +S D ++ SG
Sbjct: 72 VSDVVISSDGQFALS-GSWDKTLRLWDLNQG-VSTRQFISHTKDVLSVAFSADNRQIVSG 129
Query: 98 GCDNVLKVFDVTTGQAQQIGQ--HNSAVQSLRFVSCGPTNQE-CIATGSWDKTVKYWDL 153
D +K+++ I H V ++RF P+N++ I + WDK VK W+L
Sbjct: 130 SRDKSIKLWNTLAQCKYTITDDCHTDWVSTVRF---SPSNRDPVIVSAGWDKVVKVWNL 185
>At1g18080 [T] KOG0279 G protein beta subunit-like protein
Length = 327
Score = 59.3 bits (142), Expect = 9e-09
Identities = 37/120 (30%), Positives = 57/120 (46%), Gaps = 8/120 (6%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+ D+ S F S SWD ++R+WD+ +G R H VL+ +S+D ++ S
Sbjct: 66 VEDVVLSSDGQFALS-GSWDGELRLWDLAAG-VSTRRFVGHTKDVLSVAFSLDNRQIVSA 123
Query: 98 GCDNVLKVFDVTTGQAQQIGQ----HNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
D +K+++ I + H V +RF T Q I + SWDKTVK W+L
Sbjct: 124 SRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRF--SPNTLQPTIVSASWDKTVKVWNL 181
Score = 49.3 bits (116), Expect = 9e-06
Identities = 40/132 (30%), Positives = 64/132 (48%), Gaps = 11/132 (8%)
Query: 36 DSISDIAFSPQSDFMFSVS-SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
D +S + FSP + VS SWD V++W++ + + H V T S DG+
Sbjct: 151 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLA-GHTGYVSTVAVSPDGSLC 209
Query: 95 ASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQE--CIATGSWDKTVKYWD 152
ASGG D V+ ++D+ G+ + NS + +L C N+ C AT + +K WD
Sbjct: 210 ASGGKDGVVLLWDLAEGKKLYSLEANSVIHAL----CFSPNRYWLCAAT---EHGIKIWD 262
Query: 153 LRSPQPIMTLQM 164
L S + L++
Sbjct: 263 LESKSIVEDLKV 274
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 59.3 bits (142), Expect = 9e-09
Identities = 37/128 (28%), Positives = 70/128 (53%), Gaps = 9/128 (7%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVAS 96
++S + FSP +++ S SS D ++IW G + + H+ + WS D + S
Sbjct: 74 AVSAVKFSPNGEWLAS-SSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSSDSRLLVS 131
Query: 97 GGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQE--CIATGSWDKTVKYWDLR 154
G D LKV++++TG++ + + +S +V C N + I +GS+D++V+ WD+R
Sbjct: 132 GSDDKTLKVWELSTGKSLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESVRIWDVR 186
Query: 155 SPQPIMTL 162
+ + + TL
Sbjct: 187 TGKCLKTL 194
Score = 56.6 bits (135), Expect = 6e-08
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 33 AAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGT 92
A D +S + F+ + S SS+D RIWD SG D PV ++S +G
Sbjct: 196 AHSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 254
Query: 93 KVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWD 152
+ + DN LK++D + G+ + + + F + T + I +GS D V W+
Sbjct: 255 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNMVYIWN 314
Query: 153 LRSPQPIMTLQ 163
L+S + + LQ
Sbjct: 315 LQSKEVVQKLQ 325
>YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 465
Score = 58.9 bits (141), Expect = 1e-08
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 45/169 (26%)
Query: 27 DIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTR 86
+++L + + ++F + S DS +WD++SGS + H P+ T
Sbjct: 299 ELLLQEGHDKGVFSLSFQCDGSLVCS-GGMDSLSMLWDIRSGS-KVMTLAGHSKPIYTVA 356
Query: 87 WSIDGTKVASGGCDNVLKVFDV---TTGQAQQIGQHNSAVQSLRF---------VSCG-- 132
WS +G +VA+GG D ++ V+D+ GQ QI H + V +RF VSCG
Sbjct: 357 WSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHRNIVTQVRFSKEDGGKKLVSCGYD 416
Query: 133 -----------------------------PTNQECIATGSWDKTVKYWD 152
N + +G WD+++K W+
Sbjct: 417 NLINVYSSDTWLKMGSLAGHTDKIISLDISNNSHFLVSGGWDRSIKLWN 465
Score = 52.4 bits (124), Expect = 1e-06
Identities = 35/121 (28%), Positives = 59/121 (47%), Gaps = 7/121 (5%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
E ISD+ + P F+ S S D R+WD S + Q H V + + DG+ V
Sbjct: 265 ERRISDVKYHPSGKFIGSASH-DMTWRLWDA-STHQELLLQEGHDKGVFSLSFQCDGSLV 322
Query: 95 ASGGCDNVLKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
SGG D++ ++D+ +G + + H+ + + V+ P + +ATG D + WD+
Sbjct: 323 CSGGMDSLSMLWDIRSGSKVMTLAGHSKPIYT---VAWSPNGYQ-VATGGGDGIINVWDI 378
Query: 154 R 154
R
Sbjct: 379 R 379
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 58.9 bits (141), Expect = 1e-08
Identities = 35/117 (29%), Positives = 66/117 (55%), Gaps = 5/117 (4%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+ +AF P D++ S +S+D+ R+WDV +G + Q H + + DG+ V+SG
Sbjct: 268 VGRVAFHPSGDYLVS-ASFDTTWRLWDVHTGV-ELLMQEGHSEGIFSIACQPDGSLVSSG 325
Query: 98 GCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
G D + +++D+ +G++ + + ++ + ++ P + +AT S D TVK WDLR
Sbjct: 326 GNDAIGRIWDLRSGKSIMVLDEH--IRQIVAMAWSPNGYQ-LATSSADDTVKIWDLR 379
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 58.5 bits (140), Expect = 1e-08
Identities = 37/121 (30%), Positives = 63/121 (51%), Gaps = 8/121 (6%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVA 95
+ + ++F P ++F+ SS D R+WDV +G R H APV++ DG ++
Sbjct: 610 NDVDCVSFHPNGCYVFTGSS-DKTCRMWDVSTGDSV-RLFLGHTAPVISIAVCPDGRWLS 667
Query: 96 SGGCDNVLKVFDVTTGQ--AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
+G D ++ V+D+ TG+ Q G +A+ SL + G + +G D TV+ WDL
Sbjct: 668 TGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSKEG----NVLISGGADHTVRVWDL 723
Query: 154 R 154
+
Sbjct: 724 K 724
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 58.5 bits (140), Expect = 1e-08
Identities = 37/122 (30%), Positives = 60/122 (48%), Gaps = 9/122 (7%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+ D+ S F S SWD ++R+WD+ +G R H VL+ +S D ++ S
Sbjct: 66 VQDVVLSSDGQFALS-GSWDGELRLWDLATGE-STRRFVGHTKDVLSVAFSTDNRQIVSA 123
Query: 98 GCDNVLKVFDVTTGQAQ----QIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
D +K+++ T G+ + + H V +RF T I + SWDKTVK W+L
Sbjct: 124 SRDRTIKLWN-TLGECKYTISEADGHKEWVSCVRF--SPNTLVPTIVSASWDKTVKVWNL 180
Query: 154 RS 155
++
Sbjct: 181 QN 182
Score = 49.3 bits (116), Expect = 9e-06
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 38 ISDIAFSPQSDFMFSVS-SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVAS 96
+S + FSP + VS SWD V++W++Q+ + H + T S DG+ AS
Sbjct: 152 VSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLA-GHSGYLNTVAVSPDGSLCAS 210
Query: 97 GGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQE--CIATGSWDKTVKYWDLR 154
GG D V+ ++D+ G+ + S + SL C N+ C AT + +++ WDL
Sbjct: 211 GGKDGVILLWDLAEGKKLYSLEAGSIIHSL----CFSPNRYWLCAAT---ENSIRIWDLE 263
Query: 155 SPQPIMTLQM 164
S + L++
Sbjct: 264 SKSVVEDLKV 273
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 57.8 bits (138), Expect = 3e-08
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 9/169 (5%)
Query: 28 IVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW 87
I+L + E + F P + S + +D + +W+V H V+ +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLAS-AGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 88 SIDGTKVASGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDK 146
+ DG+ + S D + V+D TG+ +++ H S V S GP + + TGS D
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGP---QLVCTGSDDG 174
Query: 147 TVKYWDLRSPQPIMTLQMPERVYCM---DASQKLMVVGMAERHIAVIDL 192
TVK WD+R I T Q +V + D S ++ + G + I V DL
Sbjct: 175 TVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQI-ISGGIDNDIKVWDL 222
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 57.8 bits (138), Expect = 3e-08
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 8/132 (6%)
Query: 32 NAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDG 91
NA + SIS I FSP +M S S+ D ++IW + + H+ + WS D
Sbjct: 104 NAHKKSISGIKFSPDGRYMGSGSA-DCSIKIWRMDF--VYEKTLMGHRLGINEFSWSSDS 160
Query: 92 TKVASGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKY 150
+ S D ++KVFDV++G+ + + H + V F C + IA+GS+D+T++
Sbjct: 161 KLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYV----FCCCFNPSGTLIASGSFDETIRI 216
Query: 151 WDLRSPQPIMTL 162
W R+ I ++
Sbjct: 217 WCARNGNTIFSI 228
>7297305 [T] KOG0279 G protein beta subunit-like protein
Length = 318
Score = 57.8 bits (138), Expect = 3e-08
Identities = 38/119 (31%), Positives = 62/119 (51%), Gaps = 8/119 (6%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
ISD+ S ++ S SWD +R+WD+ +G R + H VL+ +S D ++ SG
Sbjct: 67 ISDVVLSSDGNYALS-GSWDQTLRLWDLAAGKTTRRFE-GHTKDVLSVAFSADNRQIVSG 124
Query: 98 GCDNVLKVFDVTTGQAQ---QIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
D +K+++ T + + Q H V +RF S +N ++ G WD+TVK W+L
Sbjct: 125 SRDKTIKLWN-TLAECKFTIQEDGHTDWVSCVRF-SPNHSNPIIVSCG-WDRTVKVWNL 180
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 57.4 bits (137), Expect = 3e-08
Identities = 35/128 (27%), Positives = 68/128 (52%), Gaps = 9/128 (7%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVAS 96
++S + FSP +++ S SS D ++IW G + + H+ + WS D + S
Sbjct: 47 AVSSVKFSPNGEWLAS-SSADKLIKIWGAYDGKFE-KTISGHKLGISDVAWSSDSNLLVS 104
Query: 97 GGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQE--CIATGSWDKTVKYWDLR 154
D LK++DV++G+ + + +S +V C N + I +GS+D++V+ WD++
Sbjct: 105 ASDDKTLKIWDVSSGKCLKTLKGHS-----NYVFCCNFNPQSNLIVSGSFDESVRIWDVK 159
Query: 155 SPQPIMTL 162
+ + + TL
Sbjct: 160 TGKCLKTL 167
Score = 55.1 bits (131), Expect = 2e-07
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 1/131 (0%)
Query: 33 AAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGT 92
A D +S + F+ + S SS+D RIWD SG D PV ++S +G
Sbjct: 169 AHSDPVSAVHFNRDGSLIVS-SSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK 227
Query: 93 KVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWD 152
+ + DN LK++D + G+ + + + F + T + I +GS D V W+
Sbjct: 228 YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWN 287
Query: 153 LRSPQPIMTLQ 163
L++ + + LQ
Sbjct: 288 LQTKEIVQKLQ 298
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 57.4 bits (137), Expect = 3e-08
Identities = 37/122 (30%), Positives = 60/122 (48%), Gaps = 9/122 (7%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+ D+ S F S SWD ++R+WD+ +G R H VL+ +S D ++ S
Sbjct: 66 VEDVVLSSDGQFALS-GSWDGELRLWDLATGETT-RRFVGHTKDVLSVAFSTDNRQIVSA 123
Query: 98 GCDNVLKVFDVTTGQAQ----QIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
D +K+++ T G+ + + H V +RF T I + SWDKTVK W+L
Sbjct: 124 SRDRTIKLWN-TLGECKYTISEGDGHKEWVSCVRF--SPNTLVPTIVSASWDKTVKVWNL 180
Query: 154 RS 155
++
Sbjct: 181 QN 182
Score = 49.7 bits (117), Expect = 7e-06
Identities = 38/130 (29%), Positives = 65/130 (49%), Gaps = 11/130 (8%)
Query: 38 ISDIAFSPQSDFMFSVS-SWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVAS 96
+S + FSP + VS SWD V++W++Q+ + + H + T S DG+ AS
Sbjct: 152 VSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRN-SLVGHSGYLNTVAVSPDGSLCAS 210
Query: 97 GGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQE--CIATGSWDKTVKYWDLR 154
GG D V+ ++D+ G+ + S + SL C N+ C AT + +++ WDL
Sbjct: 211 GGKDGVILLWDLAEGKKLYSLEAGSIIHSL----CFSPNRYWLCAAT---ENSIRIWDLE 263
Query: 155 SPQPIMTLQM 164
S + L++
Sbjct: 264 SKSVVEDLKV 273
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 57.0 bits (136), Expect = 4e-08
Identities = 36/128 (28%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVAS 96
+I + F P +F+ S S D+ +++WD++ R + H V R+S DG +AS
Sbjct: 107 NICSLDFHPYGEFVAS-GSQDTNIKLWDIRRKGCVFRYR-GHSQAVRCLRFSPDGKWLAS 164
Query: 97 GGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
D+ +K++D+T G+ + H V + F N+ +A+GS D T+++WDL
Sbjct: 165 AADDHTVKLWDLTAGKMMSEFPGHTGPVNVVEF----HPNEYLLASGSSDGTIRFWDLEK 220
Query: 156 PQPIMTLQ 163
Q + ++
Sbjct: 221 FQVVSRIE 228
Score = 49.3 bits (116), Expect = 9e-06
Identities = 55/214 (25%), Positives = 81/214 (37%), Gaps = 28/214 (13%)
Query: 109 TTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQ---MP 165
T + Q+I H S V SL G + +ATG D V W + P IM+L P
Sbjct: 9 TAWKLQEIVAHASNVSSLVL---GKASGRLLATGGDDCRVNLWSINKPNCIMSLTGHTSP 65
Query: 166 ERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRSISCYNEGNGFAIG 225
++ ++L+V G I V DL +I +T L LK S+ + G A G
Sbjct: 66 VESVRLNTPEELIVAGSQSGSIRVWDLE-AAKILRT-LMGLKANICSLDFHPYGEFVASG 123
Query: 226 SIEGRCAVQYIDEQ----EQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQVY--------- 272
S + + I + R + +C R A V+++
Sbjct: 124 SQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMS 183
Query: 273 -------PVNSIVFHPIHGTFATAGGDGSFHFWD 299
PVN + FHP A+ DG+ FWD
Sbjct: 184 EFPGHTGPVNVVEFHPNEYLLASGSSDGTIRFWD 217
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 57.0 bits (136), Expect = 4e-08
Identities = 47/169 (27%), Positives = 75/169 (43%), Gaps = 11/169 (6%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVAS 96
SIS FSP ++ SS D V+IW++ + R H+ V WS D V S
Sbjct: 89 SISSAKFSPCGKYL-GTSSADKTVKIWNMDHMICE-RTLTGHKLGVNDIAWSSDSRCVVS 146
Query: 97 GGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
D LK+F++ T + + + HN+ V F + +GS+D++V+ WD+++
Sbjct: 147 ASDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNF----NPQSSLVVSGSFDESVRIWDVKT 202
Query: 156 PQPIMTLQM---PERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKT 201
I TL P + L+ G + + + D N GQ KT
Sbjct: 203 GMCIKTLPAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTAN-GQCIKT 250
Score = 52.8 bits (125), Expect = 8e-07
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 33 AAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGT 92
A D +S ++F+ + S S+D VRIWD +G D PV ++S +G
Sbjct: 211 AHSDPVSAVSFNRDGSLIAS-GSYDGLVRIWDTANGQCIKTLVDDENPPVAFVKFSPNGK 269
Query: 93 KVASGGCDNVLKVFDVTTGQA--QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKY 150
+ + D+ LK++D + G+ Q G NS + F + T + I +GS D +
Sbjct: 270 YILASNLDSTLKLWDFSKGKTLKQYTGHENS--KYCIFANFSVTGGKWIISGSEDCKIYI 327
Query: 151 WDLRSPQPIMTLQ 163
W+L++ + + L+
Sbjct: 328 WNLQTREIVQCLE 340
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 56.6 bits (135), Expect = 6e-08
Identities = 34/119 (28%), Positives = 61/119 (50%), Gaps = 8/119 (6%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+S I F+P + S SWD VRIW++Q G+ R H P+++ S DGT A+
Sbjct: 141 VSSIDFNPLGTLLVS-GSWDETVRIWNLQDGTCL-RMLPAHSEPIISVSISADGTLCATA 198
Query: 98 GCDNVLKVFDVTTGQAQQ--IGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
D + +++DV +GQ + + N + +L+F N++ + + + ++ WD R
Sbjct: 199 SYDGMARIWDVLSGQCLKTLVEPINVPLSNLQFTE----NRKYLLVSNLNSQIRLWDYR 253
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 56.6 bits (135), Expect = 6e-08
Identities = 37/121 (30%), Positives = 66/121 (53%), Gaps = 7/121 (5%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVA 95
+++ +AFSP ++ S S D+ VR WD+ + +P + H+ VL+ WS DG K+A
Sbjct: 115 EAVISVAFSPTGKYLAS-GSGDTTVRFWDLSTETPHFTCK-GHRHWVLSISWSPDGKKLA 172
Query: 96 SGGCDNVLKVFDVTTGQ--AQQIGQHNSAVQSLRFVSCGPTNQEC--IATGSWDKTVKYW 151
SG + + ++D +TG+ + + H+ + L + N EC +A+ S D +V+ W
Sbjct: 173 SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPL-HANPECRYVASSSKDGSVRIW 231
Query: 152 D 152
D
Sbjct: 232 D 232
Score = 52.4 bits (124), Expect = 1e-06
Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 7/115 (6%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
I+ + FSP S + S +S+D +++WD ++G + H A V WS D + SG
Sbjct: 375 INQVLFSPDSRIVAS-ASFDKSIKLWDGRTGKYLASLR-GHVAAVYQIAWSADSRLLVSG 432
Query: 98 GCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYW 151
D+ LKV+DV + A + H V + V P Q +A+G DK ++ W
Sbjct: 433 SSDSTLKVWDVKAQKLAMDLPGHADEVYA---VDWSPDGQR-VASGGKDKCLRIW 483
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 56.6 bits (135), Expect = 6e-08
Identities = 46/171 (26%), Positives = 76/171 (43%), Gaps = 13/171 (7%)
Query: 28 IVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW 87
I+L + E + F P + S + +D + +W+V H V+ +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLAS-AGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY 117
Query: 88 SIDGTKVASGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQ--ECIATGSW 144
+ DG+ + S D + V+D TG+ +++ H S V S C P + + + TGS
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNS-----CYPARKSPQLVCTGSD 172
Query: 145 DKTVKYWDLRSPQPIMTLQMPERVYCM---DASQKLMVVGMAERHIAVIDL 192
D TVK WD+R I T Q +V + D S ++ + G + I V DL
Sbjct: 173 DGTVKLWDIRKKAAIQTFQNTYQVLAVTFNDTSDQI-ISGGIDNDIKVWDL 222
>CE15742 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 510
Score = 56.6 bits (135), Expect = 6e-08
Identities = 44/183 (24%), Positives = 89/183 (48%), Gaps = 15/183 (8%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCD 100
I+FS S+ M + S D K+++W V++G R H V R+S D + + SGG D
Sbjct: 270 ISFSRDSE-MLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILSGGND 328
Query: 101 NVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPI 159
+V++V + +G+ +++ H+S + +R+ G C S D +++ W +S + +
Sbjct: 329 HVVRVHGMKSGKCLKEMRGHSSYITDVRYSDEGNHIISC----STDGSIRVWHGKSGECL 384
Query: 160 MTLQMPERVYCM-------DASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRS 212
T ++ Y + + M+V + V++++ GQ+ +T S + +
Sbjct: 385 STFRVGSEDYPILNVIPIPKSDPPQMIVCNRSNTLYVVNIS--GQVVRTMTSGKREKGDF 442
Query: 213 ISC 215
I+C
Sbjct: 443 INC 445
>7290895 [R] KOG0286 G-protein beta subunit
Length = 358
Score = 56.2 bits (134), Expect = 7e-08
Identities = 36/118 (30%), Positives = 59/118 (49%), Gaps = 8/118 (6%)
Query: 45 PQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSID--GTKVASGGCDNV 102
P SD S DS +WDV+SG ++ + H V+ + + G SG CD +
Sbjct: 167 PNSDQQILTGSGDSTCALWDVESGQLL-QSFHGHSGDVMAIDLAPNETGNTFVSGSCDRM 225
Query: 103 LKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPI 159
++D+ +G Q H S V S++F CG + IATGS D + + +D+R+ + +
Sbjct: 226 AFIWDMRSGHVVQSFEGHQSDVNSVKFHPCG----DAIATGSDDSSCRLYDMRADREV 279
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 55.8 bits (133), Expect = 1e-07
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 30 LNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSG------SPQGRAQYDHQAPVL 83
L + ED ++ +A SP + S D VR+WD ++G + + H+ V
Sbjct: 521 LTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY 580
Query: 84 TTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQH-NSAVQSLRFVS--------CGPT 134
+ ++ DG V SG D +K++++ + + NS + ++
Sbjct: 581 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ 640
Query: 135 NQECIATGSWDKTVKYWDLRSPQPIMTLQ 163
N E I +GS D+ V +WD +S P++ LQ
Sbjct: 641 NDEYILSGSKDRGVLFWDKKSGNPLLMLQ 669
>Hs9257257 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 606
Score = 55.8 bits (133), Expect = 1e-07
Identities = 50/190 (26%), Positives = 86/190 (44%), Gaps = 19/190 (10%)
Query: 77 DHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTN 135
DH V R+S DG + A+ D + ++D TG+ +G + + +S P +
Sbjct: 187 DHSRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDS 246
Query: 136 QECIATGSWDKTVKYWDLR-----SPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVI 190
+ + S DKT K WD+ S P+ + + +++ C+ L+ V ++ +I +
Sbjct: 247 TH-LLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKDHLLSVSLS-GYINYL 304
Query: 191 DLNNPGQIFKTSLSPLKWQTRSISCY----NEGNGFAI-GSIEGRCAVQYIDEQEQRKDG 245
D NNP + L +K ++SI C N G + GS +G + Y D + D
Sbjct: 305 DRNNPSK----PLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGH--INYWDSETGENDS 358
Query: 246 FSFKCHRQQV 255
F+ K H QV
Sbjct: 359 FAGKGHTNQV 368
>Hs4827056 [Z] KOG0318 WD40 repeat stress protein/actin interacting protein
Length = 534
Score = 55.8 bits (133), Expect = 1e-07
Identities = 50/190 (26%), Positives = 86/190 (44%), Gaps = 19/190 (10%)
Query: 77 DHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTN 135
DH V R+S DG + A+ D + ++D TG+ +G + + +S P +
Sbjct: 187 DHSRFVNCVRFSPDGNRFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDS 246
Query: 136 QECIATGSWDKTVKYWDLR-----SPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVI 190
+ + S DKT K WD+ S P+ + + +++ C+ L+ V ++ +I +
Sbjct: 247 TH-LLSASGDKTSKIWDVSVNSVVSTFPMGSTVLDQQLGCLWQKDHLLSVSLS-GYINYL 304
Query: 191 DLNNPGQIFKTSLSPLKWQTRSISCY----NEGNGFAI-GSIEGRCAVQYIDEQEQRKDG 245
D NNP + L +K ++SI C N G + GS +G + Y D + D
Sbjct: 305 DRNNPSK----PLHVIKGHSKSIQCLTVHKNGGKSYIYSGSHDGH--INYWDSETGENDS 358
Query: 246 FSFKCHRQQV 255
F+ K H QV
Sbjct: 359 FAGKGHTNQV 368
>7290304 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 535
Score = 55.8 bits (133), Expect = 1e-07
Identities = 48/175 (27%), Positives = 87/175 (49%), Gaps = 15/175 (8%)
Query: 23 DLANDIVLNNAAEDSISDI----AFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDH 78
D+AN+ V+ ED+ +D A PQ+ MF +D K++++D ++ + R DH
Sbjct: 151 DVANEKVVQTY-EDTHTDYVRAGAMHPQAGHMFVSGGYDGKIKLYDTRAETAVQRT-LDH 208
Query: 79 QAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTG--QAQQIGQHNSAVQSLRFVSCGPTNQ 136
APV + + +G+ S G V +V+D+ +G + QH+ V LR S G
Sbjct: 209 GAPVESMLFLPNGSIFVSAGGSQV-RVWDLISGCRLLTMMSQHHKTVTCLRLGSDG---- 263
Query: 137 ECIATGSWDKTVKYWDLRSPQPIMTLQMPERVYCMDAS--QKLMVVGMAERHIAV 189
+ +G D+ VK +D+ + + + TL P V M + + +V GM + +++
Sbjct: 264 RRLLSGGLDRHVKIYDVSTYKTVHTLTYPNAVVSMAVADGDQAVVAGMVDGLVSI 318
>YJL112w [R] KOG4155 FOG: WD40 repeat
Length = 714
Score = 55.5 bits (132), Expect = 1e-07
Identities = 55/220 (25%), Positives = 101/220 (45%), Gaps = 49/220 (22%)
Query: 33 AAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGT 92
A D ++ ++ P F+ S S D +R WD++SG A VLTT ++D +
Sbjct: 500 AHTDEVTALSLDPS--FLVS-GSQDRTIRQWDLRSGKCLQTIDLSF-ANVLTTSTNVDLS 555
Query: 93 K----------------------VASGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFV 129
K +A+G D V++++D+ +G+ + + H A+ SL+F
Sbjct: 556 KSTLLTQRNERPSIGALQSFDAALATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSLKFD 615
Query: 130 SCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAV 189
S C+ TGS+D+TV+ WDLR+ L Y S ++ + + + + AV
Sbjct: 616 SA------CLVTGSYDRTVRIWDLRT-----GLLNKFHAY----SAPVLSLDLFQENAAV 660
Query: 190 IDLNNPG-QIFKTSLSPLKWQTRSISCYNEGNGFAIGSIE 228
+ + P QI+ + + S SC +GN ++ +++
Sbjct: 661 VVADEPSVQIYDSE------KDESWSCVEQGNETSVSTVK 694
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 55.5 bits (132), Expect = 1e-07
Identities = 37/111 (33%), Positives = 60/111 (53%), Gaps = 7/111 (6%)
Query: 43 FSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNV 102
F P S+++ + S D VR+WDV +G+ R H+ P+ + +S +G +A+G D
Sbjct: 635 FHPNSNYV-ATGSADRTVRLWDVLNGNCV-RIFTGHKGPIHSLTFSPNGRFLATGATDGR 692
Query: 103 LKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWD 152
+ ++D+ G ++ H V SLRF G E +A+GS D TV+ WD
Sbjct: 693 VLLWDIGHGLMVGELKGHTDTVCSLRFSRDG----EILASGSMDNTVRLWD 739
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 55.5 bits (132), Expect = 1e-07
Identities = 37/111 (33%), Positives = 60/111 (53%), Gaps = 7/111 (6%)
Query: 43 FSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNV 102
F P S+++ + S D VR+WDV +G+ R H+ P+ + +S +G +A+G D
Sbjct: 580 FHPNSNYV-ATGSADRTVRLWDVLNGNCV-RIFTGHKGPIHSLTFSPNGRFLATGATDGR 637
Query: 103 LKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWD 152
+ ++D+ G ++ H V SLRF G E +A+GS D TV+ WD
Sbjct: 638 VLLWDIGHGLMVGELKGHTDTVCSLRFSRDG----EILASGSMDNTVRLWD 684
>CE25232 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 547
Score = 55.5 bits (132), Expect = 1e-07
Identities = 44/158 (27%), Positives = 76/158 (47%), Gaps = 10/158 (6%)
Query: 28 IVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW 87
I+ A ED+I A S +D + +D KVR+WD++ S + + D + PV + +
Sbjct: 156 IIEIQAHEDAIRCGAVSSINDHIVLTGGYDHKVRLWDIR--SKEKSLELDCEHPVESVLF 213
Query: 88 SIDGTKVASGGCDNVLKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDK 146
+ G ++ + ++K++D TTG Q + H V SLR TN C+ + D+
Sbjct: 214 -LPGEQLIATAAGPIVKIWDTTTGRQLTALQAHYKTVTSLRLA----TNSTCLLSAGIDR 268
Query: 147 TVKYWDLRSPQPIMTLQMPERVYCMDASQ--KLMVVGM 182
V + + I + MP V +D S+ + M +GM
Sbjct: 269 RVNAFRTTNYSLINSWSMPSPVLDIDVSRDDQTMAIGM 306
>Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 315
Score = 55.1 bits (131), Expect = 2e-07
Identities = 61/276 (22%), Positives = 118/276 (42%), Gaps = 42/276 (15%)
Query: 32 NAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDG 91
+ + ++ + F+ ++ + S D +++W+ G+ R H VL S D
Sbjct: 22 DCGQGAVRAVRFNVDGNYCLTCGS-DKTLKLWNPLRGTLL-RTYSGHGYEVLDAAGSFDN 79
Query: 92 TKVASGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQEC--IATGSWDKTV 148
+ + SGG D + ++DV +GQ ++ H V +++F N+E I +GS D ++
Sbjct: 80 SSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQF------NEEATVILSGSIDSSI 133
Query: 149 KYWDLRS--PQPIMTL-QMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSL-S 204
+ WD RS P+P+ TL + + V + S ++ G + + DL GQ+F + S
Sbjct: 134 RCWDCRSRRPEPVQTLDEARDGVSSVKVSDHEILAGSVDGRVRRYDL-RMGQLFSDYVGS 192
Query: 205 PLKWQTRSISCYN-EGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAAGG 263
P+ + +C++ +G + S++ ++ +D+ G +K H+ Q
Sbjct: 193 PI-----TCTCFSRDGQCTLVSSLDS--TLRLLDKDTGELLG-EYKGHKNQEYKLDCCLS 244
Query: 264 RTSTEVQVYPVNSIVFHPIHGTFATAGGDGSFHFWD 299
T V + DG FWD
Sbjct: 245 ERDTHV-----------------VSCSEDGKVFFWD 263
>Hs5729852 [R] KOG0286 G-protein beta subunit
Length = 353
Score = 54.7 bits (130), Expect = 2e-07
Identities = 38/116 (32%), Positives = 57/116 (48%), Gaps = 8/116 (6%)
Query: 47 SDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW--SIDGTKVASGGCDNVLK 104
SD +S D +WDV+SG ++ + H A VL S G SGGCD
Sbjct: 164 SDMQILTASGDGTCALWDVESGQLL-QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 222
Query: 105 VFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPI 159
V+D+ +GQ Q H S + S+R+ G + A+GS D T + +DLR+ + +
Sbjct: 223 VWDMRSGQCVQAFETHESDINSVRYYPSG----DAFASGSDDATCRLYDLRADREV 274
>Hs20336270 [R] KOG0286 G-protein beta subunit
Length = 395
Score = 54.7 bits (130), Expect = 2e-07
Identities = 38/116 (32%), Positives = 57/116 (48%), Gaps = 8/116 (6%)
Query: 47 SDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW--SIDGTKVASGGCDNVLK 104
SD +S D +WDV+SG ++ + H A VL S G SGGCD
Sbjct: 206 SDMQILTASGDGTCALWDVESGQLL-QSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAM 264
Query: 105 VFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPI 159
V+D+ +GQ Q H S + S+R+ G + A+GS D T + +DLR+ + +
Sbjct: 265 VWDMRSGQCVQAFETHESDINSVRYYPSG----DAFASGSDDATCRLYDLRADREV 316
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 54.7 bits (130), Expect = 2e-07
Identities = 45/193 (23%), Positives = 77/193 (39%), Gaps = 24/193 (12%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSP------------QGRAQYDHQAPV 82
E + A++P D + S S DS RIWD+ + +G A+ V
Sbjct: 355 ESEVFICAWNPSRDLLAS-GSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAEVPSNKDV 413
Query: 83 LTTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATG 142
+ W+ DG+ +A+G D +++ A +GQH + +L++ CG I +
Sbjct: 414 TSLDWNCDGSLLATGSYDGYARIWKTDGRLASTLGQHKGPIFALKWNKCG----NYILSA 469
Query: 143 SWDKTVKYWDLRSPQPIMTL---QMPERVYCMDASQKLMVVGMAER-HIAVIDLNNPGQI 198
DKT WD + Q P +Q +R H+ + +N P +
Sbjct: 470 GVDKTTIIWDASTGQCTQQFAFHSAPALDVDWQTNQAFASCSTDQRIHVCRLGVNEPIKT 529
Query: 199 FK---TSLSPLKW 208
FK ++ +KW
Sbjct: 530 FKGHTNEVNAIKW 542
>SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 854
Score = 54.3 bits (129), Expect = 3e-07
Identities = 51/197 (25%), Positives = 90/197 (44%), Gaps = 11/197 (5%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
+ +I + + D++ SS ++ +W+ QS S + Q H + T ++S DG ++
Sbjct: 296 QSNIDTLTVNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQ-SHYDALSTLQYSSDGQRI 354
Query: 95 ASGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
+G D +KV+D+ +G QH SAV L F G + + S D +V+ WDL
Sbjct: 355 ITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRG----NVLFSSSLDGSVRAWDL 410
Query: 154 RSPQPIMTLQMPERV----YCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQ 209
+ T P RV +D S +++ G + + GQ+ +T L+ +
Sbjct: 411 IRYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLET-LAGHEGP 469
Query: 210 TRSISCYNEGNGFAIGS 226
S+S + G+ A GS
Sbjct: 470 VSSLSFNSSGSLLASGS 486
Score = 52.0 bits (123), Expect = 1e-06
Identities = 42/132 (31%), Positives = 65/132 (48%), Gaps = 19/132 (14%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDV------QSGSPQGRAQYDHQAPVLTTRWSID 90
++S + FS + + +FS SS D VR WD+ ++ + R Q+ A
Sbjct: 383 AVSGLCFSKRGNVLFS-SSLDGSVRAWDLIRYRNFRTFTAPSRVQFSCIAV------DPS 435
Query: 91 GTKVASGGCDNV-LKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTV 148
G V +G D+ + ++ V TGQ + + H V SL F S G +A+GSWDKTV
Sbjct: 436 GEIVCAGSQDSFEIFMWSVQTGQLLETLAGHEGPVSSLSFNSSG----SLLASGSWDKTV 491
Query: 149 KYWDLRSPQPIM 160
+ WD+ S I+
Sbjct: 492 RIWDIFSRSGIV 503
>Hs14149987 [S] KOG0269 WD40 repeat-containing protein
Length = 790
Score = 54.3 bits (129), Expect = 3e-07
Identities = 38/127 (29%), Positives = 65/127 (50%), Gaps = 10/127 (7%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW-SIDGTKV 94
+S+ D+ FS + F F+ + + V++WD++ R H PV W D +
Sbjct: 164 ESVRDVQFSIRDYFTFASTFENGNVQLWDIRRPDRCERMFTAHNGPVFCCDWHPEDRGWL 223
Query: 95 ASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQEC---IATGSW--DKTVK 149
A+GG D ++KV+D+TT +A+++ VQ++ V+ EC +AT S D +
Sbjct: 224 ATGGRDKMVKVWDMTTHRAKEM----HCVQTIASVARVKWRPECRHHLATCSMMVDHNIY 279
Query: 150 YWDLRSP 156
WD+R P
Sbjct: 280 VWDVRRP 286
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 54.3 bits (129), Expect = 3e-07
Identities = 47/151 (31%), Positives = 71/151 (46%), Gaps = 35/151 (23%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+SD+ + P +++ + SS D VR+WDVQ+G R H++ VL+ S DG +ASG
Sbjct: 502 LSDVDWHPNCNYIATGSS-DKTVRLWDVQTGECV-RIFIGHRSMVLSLAMSPDGRYMASG 559
Query: 98 GCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRF-----------------VSC-------- 131
D + ++D++T + + HNS V SL + V C
Sbjct: 560 DEDGTIMMWDLSTARCITPLMGHNSCVWSLSYRVVQGYDIEWYGFLSWVVECCIGLMCWV 619
Query: 132 --GPTNQEC-----IATGSWDKTVKYWDLRS 155
G T C +A+GS D TVK WD+ S
Sbjct: 620 VNGMTGFGCGEGSLLASGSADCTVKLWDVTS 650
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 54.3 bits (129), Expect = 3e-07
Identities = 36/120 (30%), Positives = 61/120 (50%), Gaps = 7/120 (5%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVA 95
D ++ +AF P ++ +S+D R+WD+ +G+ + Q H V + DG A
Sbjct: 340 DRLARVAFHPSGKYL-GTTSYDKTWRLWDINTGA-ELLLQEGHSRSVYGIAFQQDGALAA 397
Query: 96 SGGCDNVLKVFDVTTGQAQQIGQ-HNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
S G D++ +V+D+ TG++ + Q H V S+ F N +A+G D + WDLR
Sbjct: 398 SCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNF----SPNGYHLASGGEDNQCRIWDLR 453
>At1g10580 [S] KOG0282 mRNA splicing factor
Length = 616
Score = 54.3 bits (129), Expect = 3e-07
Identities = 60/268 (22%), Positives = 103/268 (38%), Gaps = 28/268 (10%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+S I F P+ + + D KV+IWDV + R H V +S DG+K +
Sbjct: 285 VSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTA 344
Query: 98 GCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQ 157
G D +K +D TGQ ++ ++ Q + G DK + WD+ + +
Sbjct: 345 GYDKNIKYWDTETGQVISTFSTGKIPYVVK-LNPDDDKQNILLAGMSDKKIVQWDINTGE 403
Query: 158 PIMTLQMPERVYCMDA-----SQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRS 212
+T + + + ++ + + V ++ + V + P + K P S
Sbjct: 404 --VTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIP-VVIKYISEPHMHSMPS 460
Query: 213 ISCYNEGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQVY 272
IS + GN A S++ + + E+ Q F H AG + +V
Sbjct: 461 ISVHPNGNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHI-------VAG--YACQVNFS 511
Query: 273 PVNSIVFHPIHGTFATAG-GDGSFHFWD 299
P G F +G G+G FWD
Sbjct: 512 P---------DGRFVMSGDGEGKCWFWD 530
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 54.3 bits (129), Expect = 3e-07
Identities = 35/118 (29%), Positives = 57/118 (47%), Gaps = 7/118 (5%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
++ ++D+ +SP + S +S+D VR+W G + H V T WS D +
Sbjct: 368 QNVVNDVKYSPDVKLIAS-ASFDKSVRLWRASDGQYMATFR-GHVQAVYTVAWSADSRLI 425
Query: 95 ASGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYW 151
SG D+ LKV+ V T + AQ++ H V + + G +A+G DK +K W
Sbjct: 426 VSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDWAPDGSR----VASGGKDKVIKLW 479
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 53.5 bits (127), Expect = 5e-07
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 6/115 (5%)
Query: 48 DFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFD 107
D SS D+ +WD+++G Q H V++ + D SG CD K++D
Sbjct: 154 DNQIVTSSGDTTCALWDIETGQ-QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWD 212
Query: 108 VTTGQAQQ-IGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMT 161
V G +Q H S + ++ F N ATGS D T + +DLR+ Q +MT
Sbjct: 213 VREGMCRQTFTGHESDINAICFFP----NGNAFATGSDDATCRLFDLRADQELMT 263
>SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 509
Score = 53.1 bits (126), Expect = 6e-07
Identities = 39/143 (27%), Positives = 69/143 (47%), Gaps = 5/143 (3%)
Query: 26 NDIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTT 85
N++ + A E + D+AFSP +D F +S D +++W+ + + + H V T
Sbjct: 155 NNVKIVQAHEMEVRDVAFSP-NDSKFVTASDDGSLKVWNFHMSTEELKLT-GHGWDVKTV 212
Query: 86 RWSIDGTKVASGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSW 144
W +ASG DN++K +D TG + H + + F +N +AT S
Sbjct: 213 DWHPSKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQASFQKNFGSNY--LATVSR 270
Query: 145 DKTVKYWDLRSPQPIMTLQMPER 167
D T + +DLR+ + + L+ E+
Sbjct: 271 DSTCRVFDLRAMKDVRVLRGHEK 293
>CE06574 [R] KOG0266 WD40 repeat-containing protein
Length = 501
Score = 53.1 bits (126), Expect = 6e-07
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 11/159 (6%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
I+D ++S S F+ S S D+ V+I+DV SG+ R H V ++ + +AS
Sbjct: 258 INDFSWSSNSQFIASASD-DTTVKIFDVISGACL-RTMRGHTNYVFCCSFNPQSSLIASA 315
Query: 98 GCDNVLKVFDVTTGQAQQ-IGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSP 156
G D ++V+D TG + I H+ + S+ + G T +AT S+D ++ WD S
Sbjct: 316 GFDETVRVWDFKTGLCVKCIPAHSDPITSISYNHDGNT----MATSSYDGCIRVWDAASG 371
Query: 157 QPIMTL----QMPERVYCMDASQKLMVVGMAERHIAVID 191
+ TL P C + K ++ + + + D
Sbjct: 372 SCLKTLVDTDHAPVTFVCFSPNGKYLLSAQLDSSLKLWD 410
>CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 496
Score = 53.1 bits (126), Expect = 6e-07
Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 8/150 (5%)
Query: 27 DIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTR 86
+++ S++D+AF P + D R+WD+++G H + +
Sbjct: 330 ELLYQEGHSKSVADVAFHPDGSVALT-GGHDCYGRVWDMRTGRCIMFLD-GHTKEIHSVE 387
Query: 87 WSIDGTKVASGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWD 145
W +G ++ +G DN +KV+D+ + + H S V +R + G + + + S+D
Sbjct: 388 WMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVVTRVRADAAG----QYLVSASFD 443
Query: 146 KTVKYWDLRSPQPIMTLQMPE-RVYCMDAS 174
T+K W QP+ LQ + R+ C+D S
Sbjct: 444 CTLKMWSTTGWQPLRQLQGHDTRILCVDIS 473
>Hs21687048 [T] KOG0279 G protein beta subunit-like protein
Length = 366
Score = 52.8 bits (125), Expect = 8e-07
Identities = 42/124 (33%), Positives = 62/124 (49%), Gaps = 6/124 (4%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLT-TRWSIDGTK 93
E I+ +A P+S FS S D V +WD+ GS Q R Q A V+T S D ++
Sbjct: 102 EHEITKVACIPKSSQFFSASR-DRMVMMWDLH-GSSQPRQQLCGHAMVVTGLAVSPDSSQ 159
Query: 94 VASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
+ +G DN L ++DV TGQ+ + S +++ C + I S DKT++ WD
Sbjct: 160 LCTGSRDNTLLLWDVVTGQSV---ERASVSRNVVTHLCWVPREPYILQTSEDKTLRLWDS 216
Query: 154 RSPQ 157
R Q
Sbjct: 217 RGLQ 220
>Hs19705568 [R] KOG0288 WD40 repeat protein TipD
Length = 293
Score = 52.8 bits (125), Expect = 8e-07
Identities = 45/196 (22%), Positives = 88/196 (43%), Gaps = 12/196 (6%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
I+ I F ++ + S+ D RIW V + H VL+ ++ +D ++ SG
Sbjct: 28 ITSIEFDSAGSYLLAASN-DFASRIWTVDDYRLR-HTLTGHSGKVLSAKFLLDNARIVSG 85
Query: 98 GCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQ 157
D LK++D+ +++ + A S + C ++C+ +G +DK +++WD+RS
Sbjct: 86 SHDRTLKLWDL---RSKVCIKTVFAGSSCNDIVC---TEQCVMSGHFDKKIRFWDIRSES 139
Query: 158 PIMTLQMPERVYCMDASQKLMVVGMAERH--IAVIDL--NNPGQIFKTSLSPLKWQTRSI 213
+ +++ ++ +D + + + R + VIDL N Q F +
Sbjct: 140 IVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTNAIKQTFSAPGFKCGSDWTRV 199
Query: 214 SCYNEGNGFAIGSIEG 229
+G+ A GS EG
Sbjct: 200 VFSPDGSYVAAGSAEG 215
>At3g16650 [A] KOG0285 Pleiotropic regulator 1
Length = 477
Score = 52.8 bits (125), Expect = 8e-07
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 6/125 (4%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+ +A S + +MFS D +V+ WD++ R+ + H V V +G
Sbjct: 213 VRGLAVSNRHTYMFSAGD-DKQVKCWDLEQNKVI-RSYHGHLHGVYCLALHPTLDVVLTG 270
Query: 98 GCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQ 157
G D+V +V+D+ T + H+S V S V PT+ + I TGS D T+K+WDLR +
Sbjct: 271 GRDSVCRVWDIRTKMQIFVLPHDSDVFS---VLARPTDPQVI-TGSHDSTIKFWDLRYGK 326
Query: 158 PIMTL 162
+ T+
Sbjct: 327 SMATI 331
>At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 522
Score = 52.8 bits (125), Expect = 8e-07
Identities = 64/266 (24%), Positives = 107/266 (40%), Gaps = 21/266 (7%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
+D + I FS S+ + S S D K++IW +++G R H V + +S DG+++
Sbjct: 274 DDPVLCIDFSRDSEMLAS-GSQDGKIKIWRIRTGVCIRRFDA-HSQGVTSLSFSRDGSQL 331
Query: 95 ASGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
S D ++ + +G+ ++ H S V F S G I T S D TVK WD
Sbjct: 332 LSTSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSR----IITASSDCTVKVWDS 387
Query: 154 RSPQPIMTLQMPERVYCMDAS-QKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRS 212
++ + T + P + DAS + + HI V N I+ +L ++ S
Sbjct: 388 KTTDCLQTFKPPPPLRGTDASVNSIHLFPKNTEHIVV--CNKTSSIYIMTLQGQVVKSFS 445
Query: 213 ISCYNEGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQVY 272
S EG F + + Y ++++ F+++ + G V
Sbjct: 446 -SGNREGGDFVAACVSTKGDWIYCIGEDKKLYCFNYQ----------SGGLEHFMMVHEK 494
Query: 273 PVNSIVFHPIHGTFATAGGDGSFHFW 298
V I HP AT D + W
Sbjct: 495 DVIGITHHPHRNLLATYSEDCTMKLW 520
Score = 50.4 bits (119), Expect = 4e-06
Identities = 38/121 (31%), Positives = 57/121 (46%), Gaps = 13/121 (10%)
Query: 43 FSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYD-------HQAPVLTTRWSIDGTKVA 95
FSP F+ S SS D + +WD SG + QY H PVL +S D +A
Sbjct: 232 FSPDGQFLAS-SSVDGFIEVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLA 290
Query: 96 SGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
SG D +K++ + TG ++ H+ V SL F G + + S+D+T + L+
Sbjct: 291 SGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLSFSRDGSQ----LLSTSFDQTARIHGLK 346
Query: 155 S 155
S
Sbjct: 347 S 347
>7302218 [R] KOG0302 Ribosome Assembly protein
Length = 422
Score = 52.8 bits (125), Expect = 8e-07
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 6/122 (4%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYD----HQAPVLTTRWSIDGT 92
S+ D+ +SP + + S D +RIWD ++ SPQ HQ+ V W+ +
Sbjct: 237 SVEDLQWSPNERSVLASCSVDKTIRIWDCRA-SPQKACMLTCEDAHQSDVNVISWNRNEP 295
Query: 93 KVASGGCDNVLKVFDVTTGQAQQ-IGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYW 151
+ASGG D L ++D+ Q+++ I + V P +A+G D + W
Sbjct: 296 FIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHITTVEWSPAEATVLASGGDDDQIALW 355
Query: 152 DL 153
DL
Sbjct: 356 DL 357
>7300980 [R] KOG4155 FOG: WD40 repeat
Length = 743
Score = 52.8 bits (125), Expect = 8e-07
Identities = 33/120 (27%), Positives = 62/120 (51%), Gaps = 7/120 (5%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCD 100
+AF P +++ + S D VR+W SG R D + V +S DG +A+ G +
Sbjct: 587 VAFHPNGNYI-ATGSADHSVRLWCATSGKLM-RVFADCRQAVTQLAFSPDGKMLAAAGEE 644
Query: 101 NVLKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPI 159
+++FD+ G Q ++ H++++ SL + T+ +AT D T++ WD++ P+
Sbjct: 645 TKVRIFDLAAGAQLAELKDHSASISSLSW----STHNRHLATACSDGTLRLWDIKKLSPM 700
>Hs22046076 [R] KOG0266 WD40 repeat-containing protein
Length = 177
Score = 52.4 bits (124), Expect = 1e-06
Identities = 50/182 (27%), Positives = 82/182 (44%), Gaps = 21/182 (11%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSP--QGRAQYDHQAPVLTTRWSIDGTK 93
DSI FSP + + + SWDS V IWD++ +P +A H A + +S G
Sbjct: 10 DSIQSSDFSPTVNCL-ATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCLCYSASGL- 67
Query: 94 VASGGCDNVLKVFDVTTGQAQ-QIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWD 152
+ASG D + ++ TT Q+ H + V+S+ F ++ +A+ + + VK WD
Sbjct: 68 LASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAF----SPDELWLASAGYSRMVKVWD 123
Query: 153 LRSPQPIMTLQM----PERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKW 208
+ + + TL+ K++V G A++ QI +TS SP
Sbjct: 124 CNTGKCLETLKQGVLDVAHTCAFTPDGKILVSGAADQ--------TRRQISRTSKSPRDP 175
Query: 209 QT 210
QT
Sbjct: 176 QT 177
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 52.4 bits (124), Expect = 1e-06
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 14/164 (8%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCD 100
+ FSP + ++ S + D K+ ++ V++G + + L+ +S DG +ASG D
Sbjct: 133 VQFSPCNKYVISGLN-DGKISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAID 191
Query: 101 NVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPI 159
++ +FDV G+ Q + H V+SL C N + + T S D +K +D+ +
Sbjct: 192 GIITIFDVAAGKVVQTLEGHAMPVRSL----CFSPNSQLLLTASDDGHMKLYDVTHSDVV 247
Query: 160 MTLQ-MPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTS 202
TL V C+ S+ +H A +N +I+ TS
Sbjct: 248 GTLSGHASWVLCVAFSED-------GKHFASSSSDNSVKIWDTS 284
Score = 52.4 bits (124), Expect = 1e-06
Identities = 55/239 (23%), Positives = 103/239 (43%), Gaps = 24/239 (10%)
Query: 54 SSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQA 113
SS DS + +WD +SG + + + T ++S V SG D + ++ V TG+A
Sbjct: 103 SSLDSTMCLWDARSGDKKHLLSFG-PVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKA 161
Query: 114 QQI--GQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIMTLQ---MPERV 168
+Q Q+ S+ + G + IA+G+ D + +D+ + + + TL+ MP R
Sbjct: 162 EQTLDAQNGKYTLSIAYSPDG----KYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRS 217
Query: 169 YCMDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRSISCYNEGNGFAIGSIE 228
C + +L++ + H+ + D+ + + T W ++ +G FA S +
Sbjct: 218 LCFSPNSQLLLTASDDGHMKLYDVTH-SDVVGTLSGHASW-VLCVAFSEDGKHFASSSSD 275
Query: 229 GRCAVQYIDEQEQRKDGFSFKCHRQQV-------QNNGAAGGRTSTEVQVY--PVNSIV 278
+ + +RK +F H QV N+ A + +Y P N+IV
Sbjct: 276 NSVKIW---DTSERKCLHTFAEHTDQVWGVRYSPGNDKVASASEDKSLNIYYCPPNAIV 331
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 52.0 bits (123), Expect = 1e-06
Identities = 35/120 (29%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
E I + FS + S S D V +WDV++G + D V T +S DG +
Sbjct: 376 EQEIYSLDFSKDGKTLVS-GSGDRTVCLWDVEAGEQKLILHTDDG--VTTVMFSPDGQFI 432
Query: 95 ASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
A+G D V++++ + +Q+ H +V S+ F G + + +GS D T+K W+L+
Sbjct: 433 AAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDG----KYLVSGSLDNTIKLWELQ 488
Score = 50.1 bits (118), Expect = 5e-06
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 6/114 (5%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+ +AFSP ++ + D ++RIWD+ R H+ + + +S DG + SG
Sbjct: 337 VRSVAFSPDGKYL-ATGVEDQQIRIWDIAQKRVY-RLLTGHEQEIYSLDFSKDGKTLVSG 394
Query: 98 GCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYW 151
D + ++DV G+ + I + V ++ F G + IA GS DK ++ W
Sbjct: 395 SGDRTVCLWDVEAGEQKLILHTDDGVTTVMFSPDG----QFIAAGSLDKVIRIW 444
Score = 49.7 bits (117), Expect = 7e-06
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
+D ++ + FSP F+ + S D +RIW S + H+ V + +S DG +
Sbjct: 417 DDGVTTVMFSPDGQFI-AAGSLDKVIRIWT--SSGTLVEQLHGHEESVYSVAFSPDGKYL 473
Query: 95 ASGGCDNVLKVFDVTTGQ-------------AQQIGQHNSAVQSLRFVSCGPTNQECIAT 141
SG DN +K++++ Q H + S+ G + I +
Sbjct: 474 VSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDG----KWIIS 529
Query: 142 GSWDKTVKYWDLRSPQPIMTLQ 163
GS D+T+++W SP +TLQ
Sbjct: 530 GSKDRTIQFWSPDSPHSQLTLQ 551
Score = 49.7 bits (117), Expect = 7e-06
Identities = 37/129 (28%), Positives = 62/129 (47%), Gaps = 17/129 (13%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYD-----------HQAPVL 83
E+S+ +AFSP ++ S S D+ +++W++Q S + Y H+ +L
Sbjct: 458 EESVYSVAFSPDGKYLVS-GSLDNTIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFIL 516
Query: 84 TTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQ-HNSAVQSLRFVSCGPTNQECIATG 142
+ S DG + SG D ++ + + +Q Q HN++V S V+ P N C ATG
Sbjct: 517 SVTVSPDGKWIISGSKDRTIQFWSPDSPHSQLTLQGHNNSVIS---VAVSP-NGHCFATG 572
Query: 143 SWDKTVKYW 151
S D + W
Sbjct: 573 SGDLRARIW 581
>SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 703
Score = 52.0 bits (123), Expect = 1e-06
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVA 95
DS+ I S D + S S+DS +RIW V +G + H + + + +
Sbjct: 508 DSVRTI--SGYGDILVS-GSYDSSIRIWRVSTGECLYHLR-GHSLRIYSVLYEPERNICI 563
Query: 96 SGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
SG D ++V+D++TG + + + + A FV+ Q + +GS D T++ WDL +
Sbjct: 564 SGSMDKSIRVWDLSTGTCKYVLEGHDA-----FVTLLNVFQNRLISGSADSTIRIWDLNT 618
Query: 156 PQPIMTL 162
+P+M L
Sbjct: 619 GKPLMVL 625
>Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 513
Score = 52.0 bits (123), Expect = 1e-06
Identities = 30/124 (24%), Positives = 62/124 (49%), Gaps = 6/124 (4%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
+D++ + FS ++ M + + D K+++W +QSG R + H V +S D +++
Sbjct: 264 DDAVLCMCFSRDTE-MLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSKDSSQI 322
Query: 95 ASGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDL 153
S D +++ + +G+ ++ H+S V F G I + S D TVK W++
Sbjct: 323 LSASFDQTIRIHGLKSGKTLKEFRGHSSFVNEATFTQDG----HYIISASSDGTVKIWNM 378
Query: 154 RSPQ 157
++ +
Sbjct: 379 KTTE 382
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 52.0 bits (123), Expect = 1e-06
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 10/169 (5%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTK-- 93
D + D+ +S ++ + S D +++WD + + +H V + WS +
Sbjct: 68 DGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQEVYSVDWSQTRGEQL 127
Query: 94 VASGGCDNVLKVFDVTTGQAQ-QIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWD 152
V SG D +K++D T G++ H S + S + P C A+ S D+T++ WD
Sbjct: 128 VVSGSWDQTVKLWDPTVGKSLCTFRGHESIIYSTIW---SPHIPGCFASASGDQTLRIWD 184
Query: 153 LRSP--QPIMTLQMPERVYC--MDASQKLMVVGMAERHIAVIDLNNPGQ 197
+++ + ++ E + C ++ L+V G + + DL N Q
Sbjct: 185 VKAAGVRIVIPAHQAEILSCDWCKYNENLLVTGAVDCSLRGWDLRNVRQ 233
>At4g15900 [A] KOG0285 Pleiotropic regulator 1
Length = 486
Score = 52.0 bits (123), Expect = 1e-06
Identities = 38/128 (29%), Positives = 66/128 (50%), Gaps = 7/128 (5%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVA 95
+ + +A S + +MFS D +V+ WD++ R+ + H + V +
Sbjct: 219 EQVRGLAVSNRHTYMFSAGD-DKQVKCWDLEQNKVI-RSYHGHLSGVYCLALHPTLDVLL 276
Query: 96 SGGCDNVLKVFDVTTG-QAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
+GG D+V +V+D+ T Q + H++ V S V PT+ + + TGS D T+K+WDLR
Sbjct: 277 TGGRDSVCRVWDIRTKMQIFALSGHDNTVCS---VFTRPTDPQ-VVTGSHDTTIKFWDLR 332
Query: 155 SPQPIMTL 162
+ + TL
Sbjct: 333 YGKTMSTL 340
Score = 49.7 bits (117), Expect = 7e-06
Identities = 64/270 (23%), Positives = 104/270 (37%), Gaps = 33/270 (12%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+ +AF P +++ F S D ++IWDV +G + H V S T + S
Sbjct: 179 VRSVAFDPSNEW-FCTGSADRTIKIWDVATGVLK-LTLTGHIEQVRGLAVSNRHTYMFSA 236
Query: 98 GCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQ 157
G D +K +D+ Q + I ++ + + ++ PT + + TG D + WD+R+
Sbjct: 237 GDDKQVKCWDLE--QNKVIRSYHGHLSGVYCLALHPT-LDVLLTGGRDSVCRVWDIRTKM 293
Query: 158 PIMTLQMPERVYC---MDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRSIS 214
I L + C + +V G + I DL G+ T L+ K R+++
Sbjct: 294 QIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLRY-GKTMST-LTHHKKSVRAMT 351
Query: 215 CYNEGNGFAIGSIEGRCAVQYIDEQEQRKDGFSFKCHRQQVQNNGAAGGRTSTEVQVYPV 274
+ + N FA S + + K F CH Q T + V
Sbjct: 352 LHPKENAFASASADN------TKKFSLPKGEF---CHNMLSQQ--------KTIINAMAV 394
Query: 275 NSIVFHPIHGTFATAGGDGSFHFWDKNHRH 304
N G T G +GS FWD H
Sbjct: 395 NE------DGVMVTGGDNGSIWFWDWKSGH 418
>Hs22052079 [R] KOG0266 WD40 repeat-containing protein
Length = 426
Score = 51.6 bits (122), Expect = 2e-06
Identities = 32/132 (24%), Positives = 65/132 (49%), Gaps = 11/132 (8%)
Query: 28 IVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQG-----RAQYDHQAPV 82
+ + A ++IS+ F+ F+ + SSWD ++IW+V +G + H+ V
Sbjct: 266 LTITKAHSNAISNCCFTFSGHFLCT-SSWDKNLKIWNVHTGEFRNCGACVTLMQGHEGSV 324
Query: 83 LTTRWSIDGTKVASGGCDNVLKVFDVTTGQAQ-QIGQHNSAVQSLRFVSCGPTNQECIAT 141
+ ++ D + + SGG D + ++DV G + + HN V + N++ I +
Sbjct: 325 SSCHFARDSSFLISGGFDRTVAIWDVAEGYRKLSLKGHNDWVMDVAI----SNNKKWILS 380
Query: 142 GSWDKTVKYWDL 153
S D+T++ W++
Sbjct: 381 ASKDRTMRLWNI 392
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 51.6 bits (122), Expect = 2e-06
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 17/170 (10%)
Query: 41 IAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQ-----YD-HQAPVLTTRWSIDGTKV 94
+++SP + S D K+ +WDV S +PQ + Y+ H++ + W + +
Sbjct: 174 LSWSPFKEGYLLSGSQDQKICLWDV-SATPQDKVLNAMFVYEGHESAIADVSWHMKNENL 232
Query: 95 -ASGGCDNVLKVFDVTTGQAQ-QIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWD 152
S G D L ++D T Q Q Q+ H V L F P N+ +AT S D TV +D
Sbjct: 233 FGSAGEDGRLVIWDTRTNQMQHQVKVHEREVNYLSF---NPFNEWVLATASSDSTVALFD 289
Query: 153 LR---SPQPIMTLQMPE--RVYCMDASQKLMVVGMAERHIAVIDLNNPGQ 197
LR +P +M+ E +V + ++ +R + V DLN G+
Sbjct: 290 LRKLNAPLHVMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGE 339
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 51.2 bits (121), Expect = 2e-06
Identities = 32/125 (25%), Positives = 60/125 (47%), Gaps = 14/125 (11%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW-------SID 90
+S +A++P + + + S D+ +R WD + GSP G A H P++ W
Sbjct: 180 VSCVAWAPDASII-ATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAPDSG 238
Query: 91 GTKVASGGCDNVLKVFDVTTGQAQ-QIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVK 149
+ASG DN +++++V + H + + +R+ Q I + S+DKT++
Sbjct: 239 PYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRW-----GGQNWIYSSSYDKTIR 293
Query: 150 YWDLR 154
WD +
Sbjct: 294 IWDAK 298
>Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 51.2 bits (121), Expect = 2e-06
Identities = 35/132 (26%), Positives = 66/132 (49%), Gaps = 11/132 (8%)
Query: 28 IVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW 87
IV + +++S + +S + + SWD +R+WDV+SGS + + ++ +
Sbjct: 250 IVTLSGHMEAVSSVLWSDAEEICSA--SWDHTIRVWDVESGSLKSTLTGNKVFNCIS--Y 305
Query: 88 SIDGTKVASGGCDNVLKVFDVTTGQAQQIG----QHNSAVQSLRFVSCGPTNQECIATGS 143
S ++ASG D ++++D T + H V S+++ PT+++ + +GS
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW---SPTHEQQLISGS 362
Query: 144 WDKTVKYWDLRS 155
D VK WD RS
Sbjct: 363 LDNIVKLWDTRS 374
>Hs13899346 [R] KOG0302 Ribosome Assembly protein
Length = 446
Score = 51.2 bits (121), Expect = 2e-06
Identities = 40/174 (22%), Positives = 71/174 (39%), Gaps = 6/174 (3%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQG---RAQYDHQAPVLTTRWSIDGTK 93
S+ D+ +SP + +F+ S D+ +RIWD+++ + H V WS
Sbjct: 263 SVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPF 322
Query: 94 VASGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWD 152
+ SGG D LK++D+ ++ + V + V P + A D + WD
Sbjct: 323 LLSGGDDGALKIWDLRQFKSGSPVATFKQHVAPVTSVEWHPQDSGVFAASGADHQITQWD 382
Query: 153 LRSPQPIMTLQMPERVYCMDASQKLMVVGMAERHIAVIDLNN--PGQIFKTSLS 204
L + + D Q+L+ V E + + + PG + T+LS
Sbjct: 383 LAVERDPEAGDVEADPGLADLPQQLLFVHQGETELKELHWHPQCPGLLVSTALS 436
>At5g56130 [S] KOG1407 WD40 repeat protein
Length = 315
Score = 51.2 bits (121), Expect = 2e-06
Identities = 48/194 (24%), Positives = 86/194 (43%), Gaps = 11/194 (5%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVA 95
DS+ + + P+ + + +S D VR+WD +SG + Q + + + DGT VA
Sbjct: 67 DSVDQLCWDPKHSDLVATASGDKSVRLWDARSG--KCTQQVELSGENINITYKPDGTHVA 124
Query: 96 SGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
G D+ L + DV + + N V + + P + + TG TV+ S
Sbjct: 125 VGNRDDELTILDVRKFKPLHRRKFNYEVNEIAWNM--PGDFFFLTTGL--GTVEVLSYPS 180
Query: 156 PQPIMTLQM-PERVYC--MDASQKLMVVGMAERHIAVIDLNNPGQIFKTSLSPLKWQTRS 212
+P+ TL YC +D + VG A+ +++ D+++ + + + L+W R+
Sbjct: 181 LKPLDTLTAHTAGCYCIAIDPKGRYFAVGSADSLVSLWDISD--MLCLRTFTKLEWPVRT 238
Query: 213 ISCYNEGNGFAIGS 226
IS G A S
Sbjct: 239 ISFNYSGEYIASAS 252
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 51.2 bits (121), Expect = 2e-06
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVA 95
D+++ +A SP +FS ++R+WD+++ R+ H+ PV+ G +A
Sbjct: 61 DTLTALALSPDDKLLFSAGH-SRQIRVWDLETLKCI-RSWKGHEGPVMGMACHASGGLLA 118
Query: 96 SGGCDNVLKVFDVTTGQAQQIGQ-HNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
+ G D + V+DV G + H V S+ F +N+ + +GS D TV+ WDL
Sbjct: 119 TAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFHP--DSNKNILISGSDDATVRVWDLN 176
Query: 155 S 155
+
Sbjct: 177 A 177
>Hs20357529 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 50.8 bits (120), Expect = 3e-06
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 48 DFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFD 107
D SS D+ +WD+++G Q H V++ + DG SG CD +K++D
Sbjct: 154 DNQIITSSGDTTCALWDIETGQ-QTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKLWD 212
Query: 108 VTTGQAQQ--IGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRSPQPIM 160
V +Q IG H S + ++ F N TGS D T + +DLR+ Q ++
Sbjct: 213 VRDSMCRQTFIG-HESDINAVAFF----PNGYAFTTGSDDATCRLFDLRADQELL 262
>ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 384
Score = 50.8 bits (120), Expect = 3e-06
Identities = 36/137 (26%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 18 MATEKDLANDIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYD 77
++ E + V+ E +++D AFS + S + V +WD +S +
Sbjct: 188 VSQESSSISPTVVLRRHETAVNDCAFSFFDKKLLSSAGDGGMVVLWDTRSEDCIHAIEEA 247
Query: 78 HQAPVLTTRWS-IDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQ 136
H + +L+ R+S +DG +A+ CD +KV+D +Q + + + V P N
Sbjct: 248 HTSDILSVRFSPLDGNVIATSSCDGSVKVWD-RRSLSQPLHILLGHSKDVVSVEWSPHND 306
Query: 137 ECIATGSWDKTVKYWDL 153
+ +A+GS D+ V WDL
Sbjct: 307 KVLASGSTDRRVIVWDL 323
>ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 408
Score = 50.8 bits (120), Expect = 3e-06
Identities = 33/137 (24%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 26 NDIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTT 85
N+I + +++ D++FS +D F +S DS ++IWD + + H V
Sbjct: 171 NNIQIIQGHTEAVRDLSFS-HNDSKFCSASDDSTIKIWDSIEAKEESVLR-GHNWDVRAA 228
Query: 86 RWSIDGTKVASGGCDNVLKVFDVTTGQAQ-QIGQHNSAVQSLRFVSCGPTNQECIATGSW 144
+W + +AS G DN++K++D T + + H + + +L+++ ++ + TG
Sbjct: 229 QWHKYKSLIASAGKDNLVKMWDPRTAEELCTLHHHKNTILALKWMG----DENYLLTGGK 284
Query: 145 DKTVKYWDLRSPQPIMT 161
D+ +K D+R+ + T
Sbjct: 285 DQVIKMVDIRTMTDVFT 301
>CE28405 [S] KOG0282 mRNA splicing factor
Length = 567
Score = 50.8 bits (120), Expect = 3e-06
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
++ + + P+S +F S D+K+++W+V R H+ PV ++ +GT+ S
Sbjct: 278 VNFLQWFPKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNNEGTEFLSA 337
Query: 98 GCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
D +K++D TGQ +Q L++ N G +K + WD RS
Sbjct: 338 SFDRYVKLWDTETGQVKQRFHTGHVPYCLKYHPDDDKN-HMFLVGMQNKKIIQWDSRS 394
>7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 424
Score = 50.8 bits (120), Expect = 3e-06
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 10/132 (7%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGS-PQGRAQYDHQAPVLTTRWSIDGTKV 94
D +S + F P+ + S S D V+++D+ S + + PVL + G V
Sbjct: 167 DEVSYLEFHPKEHILASASR-DGTVKLFDIAKPSVKKAHKVFTDCEPVLCLSFHPTGDYV 225
Query: 95 ASGGCDNVLKVFDVTTGQ----AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKY 150
A G NVL+V+DV T Q A QH + V +++ G + ATGS+D +K
Sbjct: 226 AIGTEHNVLRVYDVATTQCFVSAIPSQQHKAGVTCVKYSPTG----KLYATGSYDGDIKI 281
Query: 151 WDLRSPQPIMTL 162
WD S + I T+
Sbjct: 282 WDGISGRCINTI 293
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 50.4 bits (119), Expect = 4e-06
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
E I + FS F+ S S D R+WDV++G Q + + + V S + +
Sbjct: 402 EQDIYSLDFSHNGRFIVS-GSGDRTARLWDVETG--QCILKLEIENGVTAIAISPNDQFI 458
Query: 95 ASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
A G D +++V+ V+ +++ H +V S+ F + + +GS DKT+K W+L+
Sbjct: 459 AVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAF----SPDSSILLSGSLDKTIKVWELQ 514
Query: 155 SPQPI 159
+ + +
Sbjct: 515 ATRSV 519
>CE02043 [R] KOG0289 mRNA splicing factor
Length = 509
Score = 50.4 bits (119), Expect = 4e-06
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 8/133 (6%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYD--HQAPVLTTRWSIDGTKVA 95
++DI+ + D++ S S DS D++SG + + Q V + + DG
Sbjct: 313 VTDISLNASGDYILSASD-DSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLIFG 371
Query: 96 SGGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
+G D V+K++D+ A H +AV+S+ F N +ATGS D VK WDLR
Sbjct: 372 TGAADAVVKIWDLKNQTVAAAFPGHTAAVRSIAFSE----NGYYLATGSEDGEVKLWDLR 427
Query: 155 SPQPIMTLQMPER 167
+ + T E+
Sbjct: 428 KLKNLKTFANEEK 440
>At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 530
Score = 50.4 bits (119), Expect = 4e-06
Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 5/120 (4%)
Query: 36 DSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSI-DGTKV 94
D +S + F +F+ V+++D++ R H AP ++ + D +
Sbjct: 94 DVVSSVCFRSDGA-LFAACDLSGVVQVFDIKERMAL-RTLRSHSAPARFVKYPVQDKLHL 151
Query: 95 ASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLR 154
SGG D V+K +DV A I +R C P N + TGS+D TVK WD R
Sbjct: 152 VSGGDDGVVKYWDVAG--ATVISDLLGHKDYVRCGDCSPVNDSMLVTGSYDHTVKVWDAR 209
>SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1
Length = 473
Score = 50.1 bits (118), Expect = 5e-06
Identities = 35/127 (27%), Positives = 60/127 (46%), Gaps = 7/127 (5%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVAS 96
++ +A SP+ ++FS D V+ WD+++ R + H + V + + +
Sbjct: 207 TVRGLAVSPRHPYLFSCGE-DKMVKCWDLETNKVI-RHYHGHLSGVYALKLHPTLDVLVT 264
Query: 97 GGCDNVLKVFDVTTGQ-AQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
G D V +V+D+ T Q + H S V SL P + TGS D T++ WDL +
Sbjct: 265 AGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQ----VVTGSMDSTIRLWDLAA 320
Query: 156 PQPIMTL 162
+ + TL
Sbjct: 321 GKTLTTL 327
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 50.1 bits (118), Expect = 5e-06
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKV 94
+ ++S +A P D + S S D +++W+VQ+G + H+ V R + DGT +
Sbjct: 192 DHNVSSVAIMPNGDHIVSASR-DKTIKMWEVQTGYCV-KTFTGHREWVRMVRPNQDGTLI 249
Query: 95 ASGGCDNVLKVFDVTTGQAQ-QIGQHNSAVQSLRFV----------SCGPTNQEC----- 138
AS D ++V+ V T + + ++ +H V+ + + + G ++
Sbjct: 250 ASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESSYSSISEATGSETKKSGKPGP 309
Query: 139 -IATGSWDKTVKYWDLRSPQPIMTL 162
+ +GS DKT+K WD+ + +MTL
Sbjct: 310 FLLSGSRDKTIKMWDVSTGMCLMTL 334
>At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 496
Score = 50.1 bits (118), Expect = 5e-06
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 12/130 (9%)
Query: 32 NAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSG-SPQGRAQYDHQAPVLTTRWS-I 89
N +D++ D+AF P S F DS + +WD ++G SP + + H A + W+
Sbjct: 278 NGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNPH 337
Query: 90 DGTKVASGGCDNVLKVFDVTTGQAQQIGQ-------HNSAVQSLRFVSCGPTNQECIATG 142
D + +G DN ++VFD + +G H +AV +++ P +
Sbjct: 338 DNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFEGHRAAVLCVQW---SPDKSSVFGSS 394
Query: 143 SWDKTVKYWD 152
+ D + WD
Sbjct: 395 AEDGLLNIWD 404
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 49.7 bits (117), Expect = 7e-06
Identities = 30/120 (25%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVAS 96
S++ + +S ++ + + SS D +R WD+ +G R + HQ + +++ G + S
Sbjct: 349 SVNSVQYSSKTGLIVTASS-DRTLRTWDITTGHCI-RIIHAHQRGIACAQYN--GKFIVS 404
Query: 97 GGCDNVLKVFDVTTGQAQQIGQ-HNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
G D +++F+ ++G+ ++ Q H ++++RF N E I +G +D TV+ W+ +
Sbjct: 405 GSSDLTIRIFEASSGKLLRMLQGHEDLIRTVRF------NDEKIVSGGYDGTVRIWNFNT 458
>Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 49.7 bits (117), Expect = 7e-06
Identities = 35/132 (26%), Positives = 65/132 (48%), Gaps = 11/132 (8%)
Query: 28 IVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRW 87
IV + +++S + +S + + SWD +R+WDV SGS + + ++ +
Sbjct: 250 IVTLSGHMEAVSSVLWSDAEEICSA--SWDHTIRVWDVGSGSLKSTLTGNKVFNCIS--Y 305
Query: 88 SIDGTKVASGGCDNVLKVFDVTTGQAQQIG----QHNSAVQSLRFVSCGPTNQECIATGS 143
S ++ASG D ++++D T + H V S+++ PT+++ + +GS
Sbjct: 306 SPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW---SPTHEQQLISGS 362
Query: 144 WDKTVKYWDLRS 155
D VK WD RS
Sbjct: 363 LDNIVKLWDTRS 374
>At5g54520 [S] KOG0282 mRNA splicing factor
Length = 404
Score = 49.7 bits (117), Expect = 7e-06
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Query: 37 SISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQG-RAQYDHQAPVLTTRWSIDGTKVA 95
+++ I +S + + + D V +W+V S + RA H APV +WS G +
Sbjct: 109 AVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLL 168
Query: 96 SGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWDLRS 155
S G D ++FDV G Q + + V ++F P N +G +++ WD+R+
Sbjct: 169 SCGYDCTSRLFDVERGVETQSFKEDEVVGVVKF---HPDNCNVFLSGGSKGSLRLWDIRA 225
>At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 49.7 bits (117), Expect = 7e-06
Identities = 43/168 (25%), Positives = 79/168 (46%), Gaps = 10/168 (5%)
Query: 22 KDLANDIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAP 81
K L V + D + +A SP + + +V+ DS V+++ + S + Y H+ P
Sbjct: 520 KKLTVSNVKSMKMNDDVLAVAISPDAKHI-AVALLDSTVKVFYMDSLKFY-LSLYGHKLP 577
Query: 82 VLTTRWSIDGTKVASGGCDNVLKVFDVTTGQA-QQIGQHNSAVQSLRFVSCGPTNQECIA 140
V+ S DG + +G D LK++ + G + I H +V ++FV N +
Sbjct: 578 VMCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSVMGVKFV----RNTHYLF 633
Query: 141 TGSWDKTVKYWDLRSPQPIMTLQ-MPERVYCMDASQK--LMVVGMAER 185
+ D+ VKYWD + ++TL+ ++C+ S + +V G +R
Sbjct: 634 SIGKDRLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDR 681
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 49.3 bits (116), Expect = 9e-06
Identities = 35/111 (31%), Positives = 58/111 (51%), Gaps = 8/111 (7%)
Query: 90 DGTKVASGGCDNVLKVFDVTTGQAQQI-GQHNSAVQSLRFVSCGPTNQECIATGSWDKTV 148
D K+ SG DN +K++D T + ++I H +V L++ ++ I TGS D TV
Sbjct: 276 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY------DERVIITGSSDSTV 329
Query: 149 KYWDLRSPQPIMTL-QMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQI 198
+ WD+ + + + TL E V + + +MV +R IAV D+ +P I
Sbjct: 330 RVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI 380
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 49.3 bits (116), Expect = 9e-06
Identities = 35/111 (31%), Positives = 58/111 (51%), Gaps = 8/111 (7%)
Query: 90 DGTKVASGGCDNVLKVFDVTTGQAQQI-GQHNSAVQSLRFVSCGPTNQECIATGSWDKTV 148
D K+ SG DN +K++D T + ++I H +V L++ ++ I TGS D TV
Sbjct: 312 DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY------DERVIITGSSDSTV 365
Query: 149 KYWDLRSPQPIMTL-QMPERVYCMDASQKLMVVGMAERHIAVIDLNNPGQI 198
+ WD+ + + + TL E V + + +MV +R IAV D+ +P I
Sbjct: 366 RVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDI 416
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 49.3 bits (116), Expect = 9e-06
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 18/131 (13%)
Query: 35 EDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQY---------DHQAP---- 81
E + A++P SD + S S DS RIW++ S G Q H P
Sbjct: 179 ESEVFICAWNPVSDLLAS-GSGDSTARIWNLNENSNGGSTQLVLRHCIREGGHDVPSNKD 237
Query: 82 VLTTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRFVSCGPTNQECIAT 141
V + W+ DGT +A G D +++ A +GQH + +L++ G + +
Sbjct: 238 VTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKG----NYVLS 293
Query: 142 GSWDKTVKYWD 152
DKT WD
Sbjct: 294 AGVDKTTIIWD 304
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 49.3 bits (116), Expect = 9e-06
Identities = 33/149 (22%), Positives = 66/149 (44%), Gaps = 23/149 (15%)
Query: 26 NDIVLNNAAEDSISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGS---------------- 69
+D+ + + A+SP + + S S D+ RIW + GS
Sbjct: 256 SDVRILEGHTSEVCACAWSPSASLLAS-GSGDATARIWSIPEGSFKAVHTGRNINALILK 314
Query: 70 -PQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFDVTTGQAQQIGQHNSAVQSLRF 128
+G++ + V T W+ +GT +A+G CD +++ + + +H + SL++
Sbjct: 315 HAKGKSN-EKSKDVTTLDWNGEGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKW 373
Query: 129 VSCGPTNQECIATGSWDKTVKYWDLRSPQ 157
G + + TGS D+T WD+++ +
Sbjct: 374 NKKG----DYLLTGSVDRTAVVWDVKAEE 398
>At4g34460 [R] KOG0286 G-protein beta subunit
Length = 377
Score = 49.3 bits (116), Expect = 9e-06
Identities = 35/147 (23%), Positives = 64/147 (42%), Gaps = 13/147 (8%)
Query: 38 ISDIAFSPQSDFMFSVSSWDSKVRIWDVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASG 97
+ ++ S + F S DS R+WD ++ S R + H+ V T ++ DG + +G
Sbjct: 207 VLSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTG 266
Query: 98 GCDNVLKVFDVTTGQAQQIGQ-----HNSAVQSLRFVSCGPTNQECIATGSWDKTVKYWD 152
D +++D+ TG Q+ Q N V S+ F G + A + + T WD
Sbjct: 267 SDDGTCRLYDIRTGHQLQVYQPHGDGENGPVTSIAFSVSG---RLLFAGYASNNTCYVWD 323
Query: 153 LRSPQPIMTLQMPE-----RVYCMDAS 174
+ ++ L + + R+ C+ S
Sbjct: 324 TLLGEVVLDLGLQQDSHRNRISCLGLS 350
>At4g33270 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 457
Score = 49.3 bits (116), Expect = 9e-06
Identities = 32/98 (32%), Positives = 50/98 (50%), Gaps = 12/98 (12%)
Query: 64 DVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFD-------VTTGQAQQI 116
DV+ SP H V +WS G ++ASGG DNV+ ++D TT ++
Sbjct: 251 DVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRL 310
Query: 117 GQHNSAVQSLRFVSCGPTNQECIAT--GSWDKTVKYWD 152
+H SAV++L + P +AT G D+T+K+W+
Sbjct: 311 EEHTSAVKALAWC---PFQANLLATGGGGGDRTIKFWN 345
>At4g33260 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 447
Score = 49.3 bits (116), Expect = 9e-06
Identities = 32/98 (32%), Positives = 50/98 (50%), Gaps = 12/98 (12%)
Query: 64 DVQSGSPQGRAQYDHQAPVLTTRWSIDGTKVASGGCDNVLKVFD-------VTTGQAQQI 116
DV+ SP H V +WS G ++ASGG DNV+ ++D TT ++
Sbjct: 241 DVRIRSPIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWDRSVASSNSTTQWLHRL 300
Query: 117 GQHNSAVQSLRFVSCGPTNQECIAT--GSWDKTVKYWD 152
+H SAV++L + P +AT G D+T+K+W+
Sbjct: 301 EEHTSAVKALAWC---PFQANLLATGGGGGDRTIKFWN 335
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.133 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,209,543
Number of Sequences: 60738
Number of extensions: 1023864
Number of successful extensions: 5259
Number of sequences better than 1.0e-05: 120
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 4383
Number of HSP's gapped (non-prelim): 548
length of query: 371
length of database: 30,389,216
effective HSP length: 108
effective length of query: 263
effective length of database: 23,829,512
effective search space: 6267161656
effective search space used: 6267161656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)