ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV5565 good U KOG1690 Intracellular trafficking, secretion, and vesicular transport emp24/gp25L/p24 family of membrane trafficking proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV5565 1910478 1909840 -213
(213 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YHR110w [U] KOG1690 emp24/gp25L/p24 family of membrane trafficki... 181 5e-46
YGL002w [U] KOG1690 emp24/gp25L/p24 family of membrane trafficki... 111 6e-25
YAR002c-a [U] KOG1690 emp24/gp25L/p24 family of membrane traffic... 102 5e-22
SPBC16E9.09c [U] KOG1690 emp24/gp25L/p24 family of membrane traf... 80 2e-15
Hs14723535 [U] KOG1690 emp24/gp25L/p24 family of membrane traffi... 68 1e-11
Hs20541596 [U] KOG1690 emp24/gp25L/p24 family of membrane traffi... 67 1e-11
7290498 [U] KOG1692 Putative cargo transport protein EMP24 (p24 ... 67 2e-11
CE24533 [U] KOG1690 emp24/gp25L/p24 family of membrane trafficki... 65 5e-11
SPCC24B10.17 [U] KOG1692 Putative cargo transport protein EMP24 ... 64 1e-10
Hs5803149 [U] KOG1692 Putative cargo transport protein EMP24 (p2... 59 4e-09
CE14448 [U] KOG1692 Putative cargo transport protein EMP24 (p24 ... 56 4e-08
At2g03290 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 53 3e-07
At1g21900 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 53 3e-07
At1g69460 [U] KOG1691 emp24/gp25L/p24 family of membrane traffic... 53 4e-07
7291358 [U] KOG1692 Putative cargo transport protein EMP24 (p24 ... 50 2e-06
Hs14731618 [U] KOG1693 emp24/gp25L/p24 family of membrane traffi... 48 9e-06
>YHR110w [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 212
Score = 181 bits (460), Expect = 5e-46
Identities = 88/211 (41%), Positives = 130/211 (60%), Gaps = 1/211 (0%)
Query: 1 MRSTDIFNVLLMLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQ 60
M+ + + L+ + +H Y KSGE KC+YEHL +G LL + D VE+D G F+
Sbjct: 1 MKYNIVHGICLLFAITQAVGAVHFYAKSGETKCFYEHLSRGNLLIGDLDLYVEKD-GLFE 59
Query: 61 KDDLVTLSITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPDSTRRIKLY 120
+D +L+IT+DETFDN+HRVL QK G +F+A++ GEH+ C P+Y + ++++
Sbjct: 60 EDPESSLTITVDETFDNDHRVLNQKNSHTGDVTFTALDTGEHRFCFTPFYSKKSATLRVF 119
Query: 121 HAIDIGSAISLQSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNES 180
++IG+ +L S++ M SLK R+ QL +RL SI+ EQD I++KEA FR +E N
Sbjct: 120 IELEIGNVEALDSKKKEDMNSLKGRVGQLTQRLSSIRKEQDAIREKEAEFRNQSESANSK 179
Query: 181 VTYWSIXXXXXXXXXCFFQLRYLKTLFIKQK 211
+ WS+ C FQLRYLK F+KQK
Sbjct: 180 IMTWSVFQLLILLGTCAFQLRYLKNFFVKQK 210
>YGL002w [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 216
Score = 111 bits (278), Expect = 6e-25
Identities = 62/205 (30%), Positives = 109/205 (52%), Gaps = 6/205 (2%)
Query: 12 MLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQD---DGTFQKDDLVTLS 68
+LL R++ + Y G+ KC+ + L K LL +++ V D D + +
Sbjct: 11 VLLPFRVS-AFYFYGYGGDRKCFLKELSKDTLLKGSYNLEVYDDKLADYALPSYNDYGIV 69
Query: 69 ITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPD--STRRIKLYHAIDIG 126
I ++E FDNNHRV+ Q+ P G FSF A+E GE+KICL+ + + KL ++G
Sbjct: 70 IDVEEVFDNNHRVVHQQGSPSGDFSFLALESGEYKICLQSRVNNWVGKTKTKLEIEFEVG 129
Query: 127 SAISLQSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNESVTYWSI 186
L +R + SL ++ LN +++ I+ EQ ++++E FR+++E N +W++
Sbjct: 130 FEAMLDMQRKETLESLHGKVSILNSKIVDIRREQQLMREREESFRDISESVNSRAMWWTV 189
Query: 187 XXXXXXXXXCFFQLRYLKTLFIKQK 211
C +Q++ L++ F+KQK
Sbjct: 190 TQVTLLIIICVWQMKSLRSFFVKQK 214
>YAR002c-a [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 219
Score = 102 bits (253), Expect = 5e-22
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 10 LLMLLSCRLA-----QCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKD-- 62
LL + +C L + Y E KC+++ L KG L A + + D +D
Sbjct: 6 LLQVFACCLVLPAQVTAFYYYTSGAERKCFHKELSKGTLFQATYKAQIYDDQLQNYRDAG 65
Query: 63 --DLVTLSITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPD--STRRIK 118
D L I I+ETFD+NH V+ QK G +F A + GEHKIC++P + K
Sbjct: 66 AQDFGVL-IDIEETFDDNHLVVHQKGSASGDLTFLASDSGEHKICIQPEAGGWLIKAKTK 124
Query: 119 LYHAIDIGSAISLQSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTN 178
+ +GS L S+ + + L ++ LN ++ I+ EQ ++ +EA FR+ +E N
Sbjct: 125 IDVEFQVGSDEKLDSKGKATIDILHAKVNVLNSKIGEIRREQKLMRDREATFRDASEAVN 184
Query: 179 ESVTYWSIXXXXXXXXXCFFQLRYLKTLFIKQK 211
+W + C +Q+++L F+KQK
Sbjct: 185 SRAMWWIVIQLIVLAVTCGWQMKHLGKFFVKQK 217
>SPBC16E9.09c [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 215
Score = 80.1 bits (196), Expect = 2e-15
Identities = 55/214 (25%), Positives = 95/214 (43%), Gaps = 13/214 (6%)
Query: 6 IFNVLLMLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLV 65
IF +LL + +Q +H Y + KC+ + + KG ++ +V+ + + + V
Sbjct: 5 IFGLLLFTFFFQ-SQAVHFYFDGSKPKCFLKDMPKGMMVTG----IVKAEQWNNEANKWV 59
Query: 66 T-----LSITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPD---STRRI 117
T + + +DETF NNH + F+ +G H+IC S+ +
Sbjct: 60 TSNNIKIRVQVDETFANNHLIYKNDLRSNEAVRFTTTNEGTHRICYLSTSDGAWFSSTKT 119
Query: 118 KLYHAIDIGSAISLQSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVT 177
+L+ + +L + L DR+ LN RL SI EQ + +E FR+ +E
Sbjct: 120 RLHVDLASDDKYNLIASSEDEAKDLTDRVAALNTRLESILGEQMLQRSREMTFRDTSESA 179
Query: 178 NESVTYWSIXXXXXXXXXCFFQLRYLKTLFIKQK 211
N V W+I C +QL +L+ F+K+K
Sbjct: 180 NSRVVRWTIVQIVVLLVTCIWQLSHLQRFFVKEK 213
>Hs14723535 [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 214
Score = 67.8 bits (164), Expect = 1e-11
Identities = 49/212 (23%), Positives = 102/212 (48%), Gaps = 12/212 (5%)
Query: 9 VLLMLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTLS 68
+LL+L ++ ++ E KC+ E + ++ N+ T + + L
Sbjct: 4 LLLVLWLATRGSALYFHIGETEKKCFIEEIPDETMVIGNYRTQLYDKQREEYQPATPGLG 63
Query: 69 ITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPDSTR-------RIKLYH 121
+ ++ + +LA++ +G F+F++ GEH+ICL + +ST+ ++++
Sbjct: 64 MFVEVKDPEDKVILARQYGSEGRFTFTSHTPGEHQICL---HSNSTKFSLFAGGMLRVHL 120
Query: 122 AIDIGSAIS--LQSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNE 179
I +G + + + L+ R+ QL E++ I+ EQ+ + +E FR+ +E TN+
Sbjct: 121 DIQVGEHANDYAEIAAKDKLSELQLRVRQLVEQVEQIQKEQNYQRWREERFRQTSESTNQ 180
Query: 180 SVTYWSIXXXXXXXXXCFFQLRYLKTLFIKQK 211
V +WSI +Q+R+LK+ F +K
Sbjct: 181 RVLWWSILQTLILVAIGVWQMRHLKSFFEAKK 212
>Hs20541596 [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 227
Score = 67.4 bits (163), Expect = 1e-11
Identities = 50/212 (23%), Positives = 102/212 (47%), Gaps = 12/212 (5%)
Query: 9 VLLMLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTLS 68
+LL+ L AQ ++ ++ E +C+ E + ++ N+ T + L
Sbjct: 17 LLLLALCATGAQGLYFHIGETEKRCFIEEIPDETMVIGNYRTQMWDKQKEVFLPSTPGLG 76
Query: 69 ITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPDSTR-------RIKLYH 121
+ ++ + VL+++ +G F+F++ G+H+ICL + +STR +++++
Sbjct: 77 MHVEVKDPDGKVVLSRQYGSEGRFTFTSHTPGDHQICL---HSNSTRMALFAGGKLRVHL 133
Query: 122 AIDIGSAISL--QSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNE 179
I +G + + + L+ R QL +++ I+ EQD + +E FR +E TN+
Sbjct: 134 DIQVGEHANNYPEIAAKDKLTELQLRARQLLDQVEQIQKEQDYQRYREERFRLTSESTNQ 193
Query: 180 SVTYWSIXXXXXXXXXCFFQLRYLKTLFIKQK 211
V +WSI +Q+R+LK+ F +K
Sbjct: 194 RVLWWSIAQTVILILTGIWQMRHLKSFFEAKK 225
>7290498 [U] KOG1692 Putative cargo transport protein EMP24 (p24 protein
family)
Length = 208
Score = 66.6 bits (161), Expect = 2e-11
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 16/200 (8%)
Query: 12 MLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTLSITI 71
+L+ CR + + + + +C++E+++ G F+ + DG F L + I
Sbjct: 15 LLILCRTSHAFIVSVDAHNEECFFENVEGGTKFGVTFEVI----DGGF-------LDVDI 63
Query: 72 DETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPDSTRRIKLYHAIDIGSAIS- 130
+ +NH + + G ++F A KG + +C T ++ ++ +ID+G A
Sbjct: 64 KISGPDNHVMHESEKESSGKYTFVAPAKGTYTVCFNNERSSMTPKLVMF-SIDVGDAPQR 122
Query: 131 ---LQSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNESVTYWSIX 187
L+D I +L+ L S+K+EQ+ + ++ + R + E TN V WS
Sbjct: 123 APGAPGEEEVGHTKLEDMIRELSGTLTSVKHEQEYMHVRDKIHRSVNENTNSRVVLWSTF 182
Query: 188 XXXXXXXXCFFQLRYLKTLF 207
Q+ YLK F
Sbjct: 183 EALVLVLMTVGQVYYLKRFF 202
>CE24533 [U] KOG1690 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 211
Score = 65.5 bits (158), Expect = 5e-11
Identities = 50/214 (23%), Positives = 101/214 (46%), Gaps = 18/214 (8%)
Query: 9 VLLMLLS-CRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTL 67
+L+ LLS A ++ ++ E KC+ E + ++ N+ + D T D +
Sbjct: 3 LLIALLSLATYADSLYFHIAETEKKCFIEEIPDETMVTGNYKVQL-YDPNTKGYGDYPNI 61
Query: 68 SITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPDSTRRIKLYHAIDIGS 127
+ ++ + +L++ +G F+F++ GEH IC+ Y +ST ++ +
Sbjct: 62 GMHVEVKDPEDKVILSKLYTAEGRFTFTSNTPGEHVICI---YSNSTA---WFNGAQLRV 115
Query: 128 AISLQS---RRNSAMVSLKDRIYQLNERLLSIKNEQDDIKK-------KEAVFREMTEVT 177
+ +Q+ ++ A ++ KD++ +L R+ + ++ D I K +E FR+ +E T
Sbjct: 116 HLDIQAGDHAQDYAQIAQKDKLNELQLRIRQLLDQVDQITKEQNYQRYREERFRQTSEST 175
Query: 178 NESVTYWSIXXXXXXXXXCFFQLRYLKTLFIKQK 211
N V YWSI +Q+R+L+ F +K
Sbjct: 176 NSRVFYWSIAQVVVLAITGAWQMRHLRGFFEAKK 209
>SPCC24B10.17 [U] KOG1692 Putative cargo transport protein EMP24 (p24 protein
family)
Length = 199
Score = 64.3 bits (155), Expect = 1e-10
Identities = 48/186 (25%), Positives = 82/186 (43%), Gaps = 18/186 (9%)
Query: 24 IYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTLSITIDETFDNNHRVLA 83
I LK + +C+YE+L + ++ + T V D LV++SI N +
Sbjct: 24 ITLKPHQRECFYENLRNNDQMSVTYQTNVGGDQ-------LVSMSIY------NPAGQIM 70
Query: 84 QKAVPQG--PFSFSAVEKGEHKICLEPYYPDSTRRIKLYHAIDIGSAISLQSRRNSAMVS 141
+ VP +SF+ G++ C +Y D+ ++ I + A
Sbjct: 71 HQEVPNSMAQYSFTVKNPGKYMYC---FYNDALDGESKEVLFNVHGVIYISDEDLDANNP 127
Query: 142 LKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNESVTYWSIXXXXXXXXXCFFQLR 201
L ++ QL++ + +K+EQ+ +E + R E TN+ V +WSI C FQ+
Sbjct: 128 LLGKVRQLHDTISKVKHEQEYFVARERIHRNTAESTNDRVKWWSILQTVILVSVCVFQIF 187
Query: 202 YLKTLF 207
YLK LF
Sbjct: 188 YLKRLF 193
>Hs5803149 [U] KOG1692 Putative cargo transport protein EMP24 (p24 protein
family)
Length = 201
Score = 59.3 bits (142), Expect = 4e-09
Identities = 49/201 (24%), Positives = 88/201 (43%), Gaps = 15/201 (7%)
Query: 10 LLMLLSCRLAQCMHIYLK--SGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTL 67
LL+LL+ LA ++ + +C++E + G + F+ +G F L
Sbjct: 7 LLVLLAALLATVSGYFVSIDAHAEECFFERVTSGTKMGLIFEVA----EGGF-------L 55
Query: 68 SITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPDSTRRIKLYHAIDIGS 127
I ++ T +N + G ++F+A G +K C T +I ++ IDIG
Sbjct: 56 DIDVEITGPDNKGIYKGDRESSGKYTFAAHMDGTYKFCFSNRMSTMTPKIVMF-TIDIGE 114
Query: 128 AISLQSRRNSAMVS-LKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNESVTYWSI 186
A Q A + L++ I +L + ++K+EQ+ ++ +E + R + + TN V WS
Sbjct: 115 APKGQDMETEAHQNKLEEMINELAVAMTAVKHEQEYMEVRERIHRAINDNTNSRVVLWSF 174
Query: 187 XXXXXXXXXCFFQLRYLKTLF 207
Q+ YLK F
Sbjct: 175 FEALVLVAMTLGQIYYLKRFF 195
>CE14448 [U] KOG1692 Putative cargo transport protein EMP24 (p24 protein
family)
Length = 203
Score = 55.8 bits (133), Expect = 4e-08
Identities = 46/205 (22%), Positives = 87/205 (42%), Gaps = 21/205 (10%)
Query: 10 LLMLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTLSI 69
+L +L A I++ + E +C+++ L G + F+ +G F L I
Sbjct: 7 ILAVLFVTPAASYFIHVDANEEQCFFDRLTSGTKMGLMFEVA----EGGF-------LDI 55
Query: 70 TIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPDSTRRIKLY-------HA 122
+ T +N + + G F+F+A G + C T + ++ H
Sbjct: 56 DVKITGPDNKEIYKGERESSGKFTFAAHMDGVYTYCFGNKMSTMTPKAVMFTVEITEPHQ 115
Query: 123 IDIGSAISLQSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNESVT 182
G+A + + N+ L++ + +L+ L+S+K+EQ+ ++ +E V R + E TN V
Sbjct: 116 QAPGAAANQDAADNA---KLEEMVRELSSALMSVKHEQEYMEVRERVHRNINENTNSRVV 172
Query: 183 YWSIXXXXXXXXXCFFQLRYLKTLF 207
W+ Q+ YLK F
Sbjct: 173 MWAAFEAFVLVGMTVGQIFYLKRFF 197
>At2g03290 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 213
Score = 53.1 bits (126), Expect = 3e-07
Identities = 48/210 (22%), Positives = 85/210 (39%), Gaps = 6/210 (2%)
Query: 4 TDIFNVLLMLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDD 63
+ I +++ LLS R M LKS + KC E + + + + V +D D
Sbjct: 6 SSILLLIIALLSPRTLS-MRYELKSSKTKCIGEEIHENAMSIGKYFIVNPNEDNHPLPDS 64
Query: 64 LVTLSITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEP--YYPDSTRRIKLYH 121
+ + N H V G FSF+A E G + C+ Y P++T I
Sbjct: 65 HKIIVKVMPPQGKNLHEA---DKVEAGQFSFTAYENGSYVACITAIDYKPETTLTIDFDW 121
Query: 122 AIDIGSAISLQSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNESV 181
+ S + S + ++ ++ L + ++SI E ++++E +E+ TN +
Sbjct: 122 KTGVHSKEWTNVAKKSQVDMMEYQVKTLMDTVISIHEEMYYLREREEEMQELNRSTNSKM 181
Query: 182 TYWSIXXXXXXXXXCFFQLRYLKTLFIKQK 211
+ S Q +LKT F K+K
Sbjct: 182 AWLSFGSLVVCLSVAGLQFWHLKTFFEKKK 211
>At1g21900 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 216
Score = 53.1 bits (126), Expect = 3e-07
Identities = 46/210 (21%), Positives = 96/210 (44%), Gaps = 17/210 (8%)
Query: 9 VLLMLLSCRLAQCMHIYLKS-GEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTL 67
V+L L+ + + + + + G KC E + ++ A++ V E + ++ +
Sbjct: 15 VVLFFLTVNYGEAIWLTIPTTGGTKCVSEEIQSNVVVLADYYVVDEHNP-----ENTPAV 69
Query: 68 SITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPDSTRRIKLYHAIDIGS 127
S + + NN + Q+ V G F+F+ E G + C ++ DS+ + + +
Sbjct: 70 SSKVTSPYGNN--LHHQENVTHGQFAFTTQEAGNYLAC---FWIDSSHHLANPITLGVDW 124
Query: 128 AISLQSR------RNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNESV 181
+ + ++ + + ++ ++ +L +LSI+ + IK +EA RE++E TN V
Sbjct: 125 KMGIAAKDWDSVAKKEKIEGVELQLRRLEGLVLSIRENLNYIKDREAEMREVSETTNSRV 184
Query: 182 TYWSIXXXXXXXXXCFFQLRYLKTLFIKQK 211
++SI Q+ YLK F K+K
Sbjct: 185 AWFSIMSLGVCVVVVGSQILYLKRYFHKKK 214
>At1g69460 [U] KOG1691 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 204
Score = 52.8 bits (125), Expect = 4e-07
Identities = 39/205 (19%), Positives = 85/205 (41%), Gaps = 6/205 (2%)
Query: 9 VLLMLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTLS 68
+L++ + ++ +H L SG KC E + + ++ + + +++
Sbjct: 2 LLILAIWSPISHSLHFDLHSGRTKCIAEDIKSNSMTVGKYNIDNPHEGQALPQTHKISVK 61
Query: 69 ITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLE--PYYPDSTRRIKLYHAIDIG 126
+T + + +H + V G F+FSAVE G++ C + P+ + I +
Sbjct: 62 VTSNSGNNYHHA----EQVDSGQFAFSAVEAGDYMACFTAVDHKPEVSLSIDFEWKTGVQ 117
Query: 127 SAISLQSRRNSAMVSLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNESVTYWSI 186
S + S + ++ + L + + SI E ++ +E +++ TN + + S+
Sbjct: 118 SKSWANVAKKSQVEVMEFEVKSLLDTVNSIHEEMYYLRDREEEMQDLNRSTNTKMAWLSV 177
Query: 187 XXXXXXXXXCFFQLRYLKTLFIKQK 211
Q +LKT F K+K
Sbjct: 178 LSFFVCIGVAGMQFLHLKTFFEKKK 202
>7291358 [U] KOG1692 Putative cargo transport protein EMP24 (p24 protein
family)
Length = 203
Score = 50.4 bits (119), Expect = 2e-06
Identities = 41/205 (20%), Positives = 96/205 (46%), Gaps = 18/205 (8%)
Query: 9 VLLMLLSCRLAQCMHIYLKSGEIKCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTLS 68
++L+L+ + A + L + E C+Y+H + + + +F+ + +G F+
Sbjct: 5 IVLVLVLFQAACGFIVTLDAHETMCFYDHANVSDKVTVSFEVM----EGGFK-------D 53
Query: 69 ITIDETFDNNHRVLAQKAVPQGPFSFSAVEKGEHKICLEPYYPDSTRRIKLYHAIDIGSA 128
+ ++ ++ R+ K G F+F+A+++G +++C + T +I ++ + A
Sbjct: 54 VGVEIAGPDDDRLHHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQ-FHVARA 112
Query: 129 ISL---QSRRNSAMV---SLKDRIYQLNERLLSIKNEQDDIKKKEAVFREMTEVTNESVT 182
I S+R ++ +++ I QL+ +L ++K EQ+ + + E++++ V
Sbjct: 113 IEFYMDSSKRVDDVIEQATVQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELRVL 172
Query: 183 YWSIXXXXXXXXXCFFQLRYLKTLF 207
WSI ++ YLK F
Sbjct: 173 AWSIFGPMMLIITAVLEVYYLKHFF 197
>Hs14731618 [U] KOG1693 emp24/gp25L/p24 family of membrane trafficking proteins
Length = 224
Score = 48.1 bits (113), Expect = 9e-06
Identities = 42/185 (22%), Positives = 75/185 (39%), Gaps = 16/185 (8%)
Query: 32 KCYYEHLDKGELLAANFDTVVEQDDGTFQKDDLVTLSITIDETFDNNHRVLAQKAVPQ-G 90
+C+YE + +G F + G + D + D + +VL ++ Q
Sbjct: 47 QCFYEDIAQGTKCTLEFQVIT---GGHYDVDCRLE---------DPDGKVLYKEMKKQYD 94
Query: 91 PFSFSAVEKGEHKICLEPYYPDSTRRIKLYHAIDIGSAISL--QSRRNSAMVSLKDRIYQ 148
F+F+A + G +K C + T + +Y +G L R SA+ ++
Sbjct: 95 SFTFTASKNGTYKFCFSNEFSTFTHKT-VYFDFQVGEDPPLFPSENRVSALTQMESACVS 153
Query: 149 LNERLLSIKNEQDDIKKKEAVFREMTEVTNESVTYWSIXXXXXXXXXCFFQLRYLKTLFI 208
++E L S+ + Q + +EA R E N V YWS+ Q+ LK+ F
Sbjct: 154 IHEALKSVIDYQTHFRLREAQGRSRAEDLNTRVAYWSVGEALILLVVSIGQVFLLKSFFS 213
Query: 209 KQKQT 213
++ T
Sbjct: 214 DKRTT 218
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.322 0.136 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,493,880
Number of Sequences: 60738
Number of extensions: 450935
Number of successful extensions: 1372
Number of sequences better than 1.0e-05: 16
Number of HSP's better than 0.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1350
Number of HSP's gapped (non-prelim): 16
length of query: 213
length of database: 30,389,216
effective HSP length: 102
effective length of query: 111
effective length of database: 24,193,940
effective search space: 2685527340
effective search space used: 2685527340
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)