ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV5665    suspect: LH   HC    KOG0534  Coenzyme transport and metabolism                              NADH-cytochrome b-5 reductase
r_klactV5665    suspect: LH   HC    KOG0534  Energy production and conversion                               NADH-cytochrome b-5 reductase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV5665 1946190  1947260 357  
         (357 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YOR037w [HC] KOG0534 NADH-cytochrome b-5 reductase                    311   7e-85

>YOR037w [HC] KOG0534 NADH-cytochrome b-5 reductase
          Length = 404

 Score =  311 bits (798), Expect = 7e-85
 Identities = 153/321 (47%), Positives = 215/321 (66%), Gaps = 9/321 (2%)

Query: 46  LSWNYYKESLYQRELSRDYFXXXXXXXXXXXDQDHYLIELTPLKAQKVNLWKEMNSSKLW 105
           L++ Y  E   + ELS  YF           D  H+L+E+TPL  QKVN+W  M +  LW
Sbjct: 84  LTYRYTSERENKHELSPSYFVKYKISHKRDIDSSHFLLEVTPLFKQKVNIWSLMTAENLW 143

Query: 106 SVEVKQPEIMVVRSYTPLPLTIEE-NGAVEVLRDEENASGALTFYIKQYKQGEVARWINH 164
           SVE+KQPE+MVVR+YTPLPL     +  +E+L+D +NA G L+FYIK+Y+ GEVARW++H
Sbjct: 144 SVEIKQPEVMVVRNYTPLPLKFNPASKEIEILKDGDNADGKLSFYIKKYENGEVARWLHH 203

Query: 165 LPLGHVLELRGPFVEYEFPDTADEITRDRSFLW-------GNEDCVKDNYKYQPFDILFF 217
           LP GH++E+RGPF++YEFP   +E+ R R  L+       GN       + YQP+DI+ F
Sbjct: 204 LPKGHIIEIRGPFIDYEFPHLPNELKRSRDCLYMDNRNERGNNVRENSQFIYQPYDIMMF 263

Query: 218 TGGTGIVPLLQMTLTESPFRGKIGAYHSCKSLTELGPLNSILTKLQDNDRIELHTHESNR 277
           T GTGIV  LQ+ LTESPFRG I  +H+ K++ +LGPL  IL +LQ ++R++L   E++R
Sbjct: 264 TAGTGIVTALQLLLTESPFRGTIKLFHTDKNIKQLGPLYPILLRLQASNRVQLKIFETDR 323

Query: 278 ISIPLQSDPAMEGIPSPYPYGGNEPFTSLDSK-VRPVLSLVCGPGGFISTVSGPKYDLVQ 336
            +         + I  PYPY G  PF+++++K + PVL+LVCGP  +IS++SG KYDL Q
Sbjct: 324 QTKQDVLKSIQKSITKPYPYKGLLPFSNVNNKNIMPVLALVCGPESYISSISGRKYDLNQ 383

Query: 337 GPIKGILAARGWDNSNVYKLS 357
           GP+ G+L+  GW++ NVYKLS
Sbjct: 384 GPVGGLLSKEGWNSDNVYKLS 404


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.316    0.137    0.409 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,394,870
Number of Sequences: 60738
Number of extensions: 923529
Number of successful extensions: 1819
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1814
Number of HSP's gapped (non-prelim): 1
length of query: 357
length of database: 30,389,216
effective HSP length: 107
effective length of query: 250
effective length of database: 23,890,250
effective search space: 5972562500
effective search space used: 5972562500
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)