ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV5689 good C KOG2495 Energy production and conversion NADH-dehydrogenase (ubiquinone)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV5689 1954118 1955758 547
(547 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YMR145c [C] KOG2495 NADH-dehydrogenase (ubiquinone) 745 0.0
YDL085w [C] KOG2495 NADH-dehydrogenase (ubiquinone) 645 0.0
YML120c [C] KOG2495 NADH-dehydrogenase (ubiquinone) 397 e-110
SPAC3A11.07 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 374 e-103
SPBC947.15c [C] KOG2495 NADH-dehydrogenase (ubiquinone) 333 5e-91
At4g21490 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 326 6e-89
At4g05020 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 301 2e-81
At4g28220 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 273 4e-73
At2g20800 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 258 2e-68
At2g29990 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 253 7e-67
At1g07180 [C] KOG2495 NADH-dehydrogenase (ubiquinone) 250 3e-66
>YMR145c [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 560
Score = 745 bits (1924), Expect = 0.0
Identities = 369/504 (73%), Positives = 434/504 (85%), Gaps = 1/504 (0%)
Query: 45 VPVKPSLARRVVSTTLKVSLAALLAGTGYVSYELYREANPPPQIPQAATFANGSPRKTLV 104
V K S +R TLK L + LAGT YVSY LYREANP Q+PQ+ TF NGS RKTLV
Sbjct: 57 VVAKQSFFKRTGKFTLKALLYSALAGTAYVSYSLYREANPSTQVPQSDTFPNGSKRKTLV 116
Query: 105 VLGTGWGSVSLLKHLDTSLYNVIVVSPRNYFLFTPLLPSTPVGTVELKSIVEPVRSITRS 164
+LG+GWGSVSLLK+LDT+LYNV+VVSPRNYFLFTPLLPSTPVGT+ELKSIVEPVR+I R
Sbjct: 117 ILGSGWGSVSLLKNLDTTLYNVVVVSPRNYFLFTPLLPSTPVGTIELKSIVEPVRTIARR 176
Query: 165 SPGEVHYYEAEAKDIDPVAKTVRIKSATKDHDYELDLNYDYLVVGVGAQPTTFGIPGVFE 224
S GEVHYYEAEA D+DP KT+++KS+ K++DY+LDL YDYLVVGVGAQP TFG PGV+E
Sbjct: 177 SHGEVHYYEAEAYDVDPENKTIKVKSSAKNNDYDLDLKYDYLVVGVGAQPNTFGTPGVYE 236
Query: 225 NASFLKEIPDAQDIRTKIMNNIEKAATLSANDPERKRLLSFVVVGGGPTGVEFAAELQDY 284
+SFLKEI DAQ+IR KIM++IEKAA+LS DPER RLLSFVVVGGGPTGVEFAAEL+DY
Sbjct: 237 YSSFLKEISDAQEIRLKIMSSIEKAASLSPKDPERARLLSFVVVGGGPTGVEFAAELRDY 296
Query: 285 VDQDLSKWIPEISKEIKVTLVEALPNILNMFDKSLWQYAQDLFAMEKIDVKLKTMVKNVN 344
VDQDL KW+PE+SKEIKVTLVEALPNILNMFDK L YAQDLF EKID++LKTMVK V+
Sbjct: 297 VDQDLRKWMPELSKEIKVTLVEALPNILNMFDKYLVDYAQDLFKEEKIDLRLKTMVKKVD 356
Query: 345 STTITAQCGDA-TEDIPYGLLVWATGNAPREVSKNLMAKLEQQNSRRGLLINDKMQLLGA 403
+TTITA+ GD E+IPYG+LVWATGNAPREVSKNLM KLE+Q+SRRGLLI++K+QLLGA
Sbjct: 357 ATTITAKTGDGDIENIPYGVLVWATGNAPREVSKNLMTKLEEQDSRRGLLIDNKLQLLGA 416
Query: 404 EDSIWAIGDCTFFPGLFPTAQVAHQEAEYLTETLKQQYKIDQLKWEISKTTNATETSKLH 463
+ SI+AIGDCTF PGLFPTAQVAHQE EYL + K+ YKIDQL W+++ + +E ++L
Sbjct: 417 KGSIFAIGDCTFHPGLFPTAQVAHQEGEYLAQYFKKAYKIDQLNWKMTHAKDDSEVARLK 476
Query: 464 SKLDRIVKQQKPFKYNHQGTLAYIGSEQAIADVAVGESKYQMAGSFTFLFWKSAYLGMCL 523
+++ + Q + FKYNH+G LAYIGS++AIAD+AVGE+KY++AGSFTFLFWKSAYL MCL
Sbjct: 477 NQIVKTQSQIEDFKYNHKGALAYIGSDKAIADLAVGEAKYRLAGSFTFLFWKSAYLAMCL 536
Query: 524 SFRNRILVAMDWAKVYFLGRDSSV 547
SFRNR+LVAMDWAKVYFLGRDSS+
Sbjct: 537 SFRNRVLVAMDWAKVYFLGRDSSI 560
>YDL085w [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 545
Score = 645 bits (1664), Expect = 0.0
Identities = 315/489 (64%), Positives = 393/489 (79%), Gaps = 1/489 (0%)
Query: 60 LKVSLAALLAGTGYVSYELYREANPPPQIPQAATFANGSPRKTLVVLGTGWGSVSLLKHL 119
LK++ LAGT YVSYELY+E+NPP Q+PQ+ FANG +K LV+LGTGWG++SLLK L
Sbjct: 57 LKLTFYTTLAGTLYVSYELYKESNPPKQVPQSTAFANGLKKKELVILGTGWGAISLLKKL 116
Query: 120 DTSLYNVIVVSPRNYFLFTPLLPSTPVGTVELKSIVEPVRSITRSSPGEVHYYEAEAKDI 179
DTSLYNV VVSPR++FLFTPLLPSTPVGT+E+KSIVEPVRSI R +PGEVHY EAEA D+
Sbjct: 117 DTSLYNVTVVSPRSFFLFTPLLPSTPVGTIEMKSIVEPVRSIARRTPGEVHYIEAEALDV 176
Query: 180 DPVAKTVRIKSATKDHDYELDLNYDYLVVGVGAQPTTFGIPGVFENASFLKEIPDAQDIR 239
DP AK V ++S ++D + L+YDYLVV VGA+ TTF IPGV+ NA+FLKEI DAQ+IR
Sbjct: 177 DPKAKKVMVQSVSEDEYFVSSLSYDYLVVSVGAKTTTFNIPGVYGNANFLKEIEDAQNIR 236
Query: 240 TKIMNNIEKAATLSANDPERKRLLSFVVVGGGPTGVEFAAELQDYVDQDLSKWIPEISKE 299
K+M IE+A++ NDPERKRLL+FVVVGGGPTGVEFAAELQDY++QDL KW+P++SKE
Sbjct: 237 MKLMKTIEQASSFPVNDPERKRLLTFVVVGGGPTGVEFAAELQDYINQDLRKWMPDLSKE 296
Query: 300 IKVTLVEALPNILNMFDKSLWQYAQDLFAMEKIDVKLKTMVKNVNSTTI-TAQCGDATED 358
+KV L+EALPNILNMFDK+L +YA+DLFA ++ID+++ T VK V T I T Q G D
Sbjct: 297 MKVILIEALPNILNMFDKTLIKYAEDLFARDEIDLQVNTAVKVVEPTYIRTLQNGQTNTD 356
Query: 359 IPYGLLVWATGNAPREVSKNLMAKLEQQNSRRGLLINDKMQLLGAEDSIWAIGDCTFFPG 418
I YG+LVWATGN P + SK LM+++ +Q +RRGLLINDK++LLG+E+SI+AIGDCT G
Sbjct: 357 IEYGMLVWATGNEPIDFSKTLMSRIPEQTNRRGLLINDKLELLGSENSIYAIGDCTAHTG 416
Query: 419 LFPTAQVAHQEAEYLTETLKQQYKIDQLKWEISKTTNATETSKLHSKLDRIVKQQKPFKY 478
FPTAQVAHQE EYL + L ++ +I+QL+W++ +T+ TE S+L +++ + F Y
Sbjct: 417 FFPTAQVAHQEGEYLAKILDKKLQIEQLEWDMLNSTDETEVSRLQKEVNLRKSKLDKFNY 476
Query: 479 NHQGTLAYIGSEQAIADVAVGESKYQMAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKV 538
H G LAYIGSE AIAD+ +G+S YQ+ G F FLFWKSAYL MCLS RNRIL+AMDW KV
Sbjct: 477 KHMGALAYIGSETAIADLHMGDSSYQLKGMFAFLFWKSAYLAMCLSIRNRILIAMDWTKV 536
Query: 539 YFLGRDSSV 547
YFLGRDSSV
Sbjct: 537 YFLGRDSSV 545
>YML120c [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 513
Score = 397 bits (1020), Expect = e-110
Identities = 225/469 (47%), Positives = 297/469 (62%), Gaps = 33/469 (7%)
Query: 98 SPRKTLVVLGTGWGSVSLLKHLDTSLYNVIVVSPRNYFLFTPLLPSTPVGTVELKSIVEP 157
S + +++LG+GWG++S LKH+DT YNV ++SPR+YFLFTPLLPS PVGTV+ KSI+EP
Sbjct: 51 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYFLFTPLLPSAPVGTVDEKSIIEP 110
Query: 158 VRSITRSSPGEVHYYEAEAKDIDPVAKTVRIKSATKD------------HDYE-LDLNYD 204
+ + G V YYEAEA I+P TV IKS + H E ++ YD
Sbjct: 111 IVNFALKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYD 170
Query: 205 YLVVGVGAQPTTFGIPGVFENASFLKEIPDAQDIRTKIMNNIEKAATLSANDPERKRLLS 264
YL+ VGA+P TFGIPGV + FLKEIP++ +IR N+EKA L DPER+RLLS
Sbjct: 171 YLISAVGAEPNTFGIPGVTDYGHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLS 230
Query: 265 FVVVGGGPTGVEFAAELQDYVDQDLSKWIPEISKEIKVTLVEALPNILNMFDKSLWQYAQ 324
VVVGGGPTGVE A ELQDYV QDL K++P +++E+++ LVEALP +LNMF+K L YAQ
Sbjct: 231 IVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLNMFEKKLSSYAQ 290
Query: 325 DLFAMEKIDVKLKTMVKNVNSTTITAQC----GDATED-IPYGLLVWATGNAPREVSKNL 379
I V L+T V V + A+ G TE+ IPYG L+WATGN R V +L
Sbjct: 291 SHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDL 350
Query: 380 MAKLEQQN-SRRGLLINDKMQLLGAEDSIWAIGDCTFFPGLFPTAQVAHQEAEYLTETLK 438
K+ +QN S+RGL +ND +Q+ G+ ++I+AIGD F GL PTAQVAHQEAEYL +
Sbjct: 351 FKKIPEQNSSKRGLAVNDFLQVKGS-NNIFAIGD-NAFAGLPPTAQVAHQEAEYLAKNFD 408
Query: 439 QQYKIDQLKWEISKTTNATETSKLHSKLDRIVKQQ--KPFKYNHQGTLAYIGSEQAIADV 496
+ +I + +S + K+D + ++ KPFKYN G LAY+GSE+AIA +
Sbjct: 409 KMAQIPNFQKNLSSRKD---------KIDLLFEENNFKPFKYNDLGALAYLGSERAIATI 459
Query: 497 AVGE-SKYQMAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKVYFLGRD 544
G+ + Y G TF W+ YL M LS R+R+ V DW K+ F RD
Sbjct: 460 RSGKRTFYTGGGLMTFYLWRILYLSMILSARSRLKVFFDWIKLAFFKRD 508
>SPAC3A11.07 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 551
Score = 374 bits (961), Expect = e-103
Identities = 218/498 (43%), Positives = 295/498 (58%), Gaps = 29/498 (5%)
Query: 68 LAGTGYVSY--ELYREANPPPQIPQAATFANGSPRKTLVVLGTGWGSVSLLKHLDTSLYN 125
L T V Y +YR +P P P +KTLVVLG GWG+ S+L+ +DTSL+N
Sbjct: 62 LFATAVVLYGANVYRFRHPDPHQPLP-----DPSKKTLVVLGAGWGATSILRTIDTSLFN 116
Query: 126 VIVVSPRNYFLFTPLLPSTPVGTVELKSIVEPVRSITRSSPGEVHYYEAEAKDIDPVAKT 185
VIVVSPRNYFLFT LLPST G+V +SIV+P+R + R V +YEAE D+D K
Sbjct: 117 VIVVSPRNYFLFTSLLPSTATGSVHTRSIVQPIRYMLRHKSCYVKFYEAECTDVDADKKV 176
Query: 186 VRIKSATKDH-DYELDLNYDYLVVGVGAQPTTFGIPGVFENASFLKEIPDAQDIRTKIMN 244
+ IK T D D E ++ YDYLV GA+ TF IPG+ E FLKEI DAQ IR +I++
Sbjct: 177 IHIKKTTTDGVDLEQEIKYDYLVCSHGAETQTFNIPGIAEYGCFLKEIWDAQKIRARILH 236
Query: 245 NIEKAATLSANDPERKRLLSFVVVGGGPTGVEFAAELQDYVDQDLSKWIPEISKEIKVTL 304
+E+A R+R + VVVGGGPTG+EFA E+ D+++ DL W PE++ + VTL
Sbjct: 237 CLEQAQFKDLPAETRRRYVHTVVVGGGPTGMEFAGEMADFIEDDLKSWYPELADDFAVTL 296
Query: 305 VEALPNILNMFDKSLWQYAQDLFAMEKIDVKLKTMVKNVNSTTITAQC----GDATED-I 359
VEALP++L MF L Y Q LF I ++ T +K V + I + G E+ I
Sbjct: 297 VEALPSVLPMFSAKLRDYTQSLFDSSHIKIRTNTALKKVTAENIHVEVKNPDGSKQEEVI 356
Query: 360 PYGLLVWATGNAPREVSKNLMAKLEQQNSRRGLLINDKMQLLGAEDSIWAIGDCTFFPGL 419
PYGLLVWA GN R ++K LM E+QN+RRGL++++ ++L G +D I+A+GDCT
Sbjct: 357 PYGLLVWAGGNRARPLTKKLMEGSEEQNNRRGLVVDEYLKLKGYKD-IFALGDCT-HTAY 414
Query: 420 FPTAQVAHQEAEYLTETLKQQYKIDQLKWE---------ISKTTNATETSKLHSKLDRIV 470
PTAQVA Q+ YL + K+ L +E + +++ L ++
Sbjct: 415 APTAQVASQQGAYLGQLFN---KLGSLNFEKPSEDRHIALGDEMDSSTLISLANEKHAST 471
Query: 471 KQQKPFKYNHQGTLAYIGSEQAIADVAVGESKYQM--AGSFTFLFWKSAYLGMCLSFRNR 528
K PFKY+HQG+LAY+G E+AIAD+ V Q+ +G+ F FW+S YL S RNR
Sbjct: 472 KVFLPFKYSHQGSLAYVGHEKAIADIEVPWFGKQLHASGALAFYFWRSVYLSELYSLRNR 531
Query: 529 ILVAMDWAKVYFLGRDSS 546
V +DW +V GRD S
Sbjct: 532 TNVTLDWIRVKLFGRDIS 549
>SPBC947.15c [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 551
Score = 333 bits (853), Expect = 5e-91
Identities = 187/465 (40%), Positives = 287/465 (61%), Gaps = 21/465 (4%)
Query: 96 NGSPRKTLVVLGTGWGSVSLLKHLDTSLYNVIVVSPRNYFLFTPLLPSTPVGTVELKSIV 155
+G P+K +VVLG+GWG+V+ +K+LD SLYN+ +VSPR++FLFTP+LPS VGT+ L SI
Sbjct: 86 SGVPKKNIVVLGSGWGAVAAIKNLDPSLYNITLVSPRDHFLFTPMLPSCTVGTLRLPSIT 145
Query: 156 EPVRSITRSSPGEVHYYEAEAKDIDPVAKTVRIKSATKDHD-YELDLNYDYLVVGVGAQP 214
EP+ ++ + + ++AE ID AK V I+ T+ ++ E + YD LV +GA
Sbjct: 146 EPIVALFKGKIDPSNIHQAECTAIDTSAKKVTIRGTTEANEGKEAVIPYDTLVFAIGAGN 205
Query: 215 TTFGIPGVFENASFLKEIPDAQDIRTKIMNNIEKAATLSANDPE-RKRLLSFVVVGGGPT 273
TFGI GV ++ FLKE DA+ + +I +E+ PE R RLL VVGGGPT
Sbjct: 206 QTFGIQGVRDHGCFLKEAGDAKKVFNRIFEILEQVRFNKDLSPEERARLLHITVVGGGPT 265
Query: 274 GVEFAAELQDYVDQDLSKWIPEISKEIKVTLVEALPNILNMFDKSLWQYAQDLFAMEKID 333
G+EFAAE+QD++D D+ PE+ K+I VTL+EA P +L MF KSL Y ++LF I
Sbjct: 266 GMEFAAEMQDFIDNDVKDMFPELQKDIHVTLIEAAPGVLPMFTKSLITYTENLFKNLNIK 325
Query: 334 VKLKTMVKNVNSTTITAQ-----CGDATEDIPYGLLVWATGNAPREVSKNLMAKL-EQQN 387
+ KT+VK+VN + Q A ++IPYG+LVWA G R +++ LM+ + EQ
Sbjct: 326 IMTKTVVKDVNEKNLIVQKTNPDGSKAMQEIPYGMLVWAAGITARPLTRTLMSSIPEQSG 385
Query: 388 SRRGLLINDKMQLLGAEDSIWAIGDCTFFPGLFPTAQVAHQEAEYLTETLKQQYK----- 442
+R+GL++++ ++ G + ++A+GDC F GL TAQVA+Q+ +L + L + K
Sbjct: 386 ARKGLIVDEFFRVKGVPE-MYAVGDCA-FSGLPATAQVANQQGAWLAKNLNVEGKKFALH 443
Query: 443 --IDQLKWEISKTTNATETSKLHSKLDRIVKQQKPFKYNHQGTLAYIGSEQAIADVAVGE 500
I L+ ++ + ++ + L +++++ + +PFKY+HQG LAY+G E+AIAD+ +
Sbjct: 444 ERIQALEKQLGEKEAPSQVAGLKQQVEQL--KLEPFKYHHQGALAYVGDEKAIADLKLPF 501
Query: 501 SK--YQMAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKVYFLGR 543
K + G FW+ AYL +S R++ +V +DW K GR
Sbjct: 502 MKKMLPLQGIVGHTFWRLAYLNELISARSQFMVLIDWLKTRLFGR 546
>At4g21490 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 478
Score = 326 bits (835), Expect = 6e-89
Identities = 193/477 (40%), Positives = 271/477 (56%), Gaps = 32/477 (6%)
Query: 78 LYREANPPPQIPQAATFANGSPRKT----LVVLGTGWGSVSLLKHLDTSLYNVIVVSPRN 133
+Y EANP + NG KT +V+LGTGW S LK L+ S Y V V+SPRN
Sbjct: 24 VYSEANP-------SYSNNGVETKTRKRKVVLLGTGWAGASFLKTLNNSSYEVQVISPRN 76
Query: 134 YFLFTPLLPSTPVGTVELKSIVEPVRSITRSSPGEVHYYEAEAKDIDPVAKTVRIKS--- 190
YF FTPLLPS GTVE +S+VEP+R+I R E+ + EAE IDP +K V +S
Sbjct: 77 YFAFTPLLPSVTCGTVEARSVVEPIRNIARKQNVEMSFLEAECFKIDPGSKKVYCRSKQG 136
Query: 191 ATKDHDYELDLNYDYLVVGVGAQPTTFGIPGVFENASFLKEIPDAQDIRTKIMNNIEKAA 250
E D++YDYLV+ GAQ TF IPGV EN FLKE+ DAQ IR+ ++++ EKA+
Sbjct: 137 VNSKGKKEFDVDYDYLVIATGAQSNTFNIPGVEENCHFLKEVEDAQRIRSTVIDSFEKAS 196
Query: 251 TLSANDPERKRLLSFVVVGGGPTGVEFAAELQDYVDQDLSKWIPEISKEIKVTLVEALPN 310
N+ ERKR+L FVVVGGGPTGVEFA+EL D+V++DL K P+ +++TL+EA +
Sbjct: 197 LPGLNEQERKRMLHFVVVGGGPTGVEFASELHDFVNEDLVKLYPKAKNLVQITLLEAADH 256
Query: 311 ILNMFDKSLWQYAQDLFAMEKIDVKLKTMVKNVNSTTITAQC-GDATEDIPYGLLVWATG 369
IL MFDK + ++A++ F + IDVKL +MV VN I+A+ IPYG++VW+TG
Sbjct: 257 ILTMFDKRITEFAEEKFTRDGIDVKLGSMVVKVNDKEISAKTKAGEVSTIPYGMIVWSTG 316
Query: 370 NAPREVSKNLMAKLEQQNSRRGLLINDKMQLLGAEDSIWAIGDCTFFPGLFPTAQVAHQE 429
R V K+ M ++ Q +S+R L D+ + D+I+A+GDC VA Q+
Sbjct: 317 IGTRPVIKDFMKQIGQVSSQRRALATDEWLRVEGCDNIYALGDCATINQ--RKVMVAAQQ 374
Query: 430 AEYLTETLKQQYKIDQLKWEISKTTNATETSKLHSKLDRIVKQQKPFKYNHQGTLAYIGS 489
YL + + ++ N ++ + + +PF+Y H G A +G
Sbjct: 375 GTYLAKCFDRMEVCEK---------NPEGPIRIRGEGRH---RFRPFRYRHLGQFAPLGG 422
Query: 490 EQAIADVAVGESKYQMAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKVYFLGRDSS 546
EQ A + + G + W S Y +S+R R+LV DW + + GRDSS
Sbjct: 423 EQTAAQL---PGDWVSIGHSSQWLWYSVYASKQVSWRTRVLVVSDWMRRFIFGRDSS 476
>At4g05020 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 583
Score = 301 bits (770), Expect = 2e-81
Identities = 167/369 (45%), Positives = 232/369 (62%), Gaps = 17/369 (4%)
Query: 49 PSLARRVVSTTLKVSLAALLAGTGYVSYELYREANPPPQIPQAATFANGSPRKTLVVLGT 108
PSL R +V +T+ +G G ++Y EAN A G+ +K +V+LGT
Sbjct: 18 PSLTRILVVSTI--------SGGGLIAYS---EANASYGANGGAVVETGTKKKKVVLLGT 66
Query: 109 GWGSVSLLKHLDTSLYNVIVVSPRNYFLFTPLLPSTPVGTVELKSIVEPVRSITRSSPGE 168
GW S LK+L+ S Y V ++SPRNYF FTPLLPS GTVE +S+VEP+R+I R +
Sbjct: 67 GWAGTSFLKNLNNSQYEVQIISPRNYFAFTPLLPSVTCGTVEARSVVEPIRNIGRKKNVD 126
Query: 169 VHYYEAEAKDIDPVAKTVRIKSA---TKDHDYELDLNYDYLVVGVGAQPTTFGIPGVFEN 225
Y EAE IDP +K V +S + + E ++YDYLV+ GAQ TF IPGV EN
Sbjct: 127 TSYLEAECFKIDPASKKVYCRSKQGLSSNGKKEFSVDYDYLVIATGAQSNTFNIPGVEEN 186
Query: 226 ASFLKEIPDAQDIRTKIMNNIEKAATLSANDPERKRLLSFVVVGGGPTGVEFAAELQDYV 285
FLKE+ DAQ IR ++++ EKA+ +D ERKR+L FVVVGGGPTGVEFAAEL D+V
Sbjct: 187 CHFLKEVEDAQRIRKTVIDSFEKASLPELSDEERKRILHFVVVGGGPTGVEFAAELHDFV 246
Query: 286 DQDLSKWIPEISKEIKVTLVEALPNILNMFDKSLWQYAQDLFAMEKIDVKLKTMVKNVNS 345
+DL P +++TL+EA +IL MFDK + ++A++ F+ + IDVKL +MV VN
Sbjct: 247 TEDLVSLYPRAKGSVRITLLEAADHILTMFDKRITEFAEEKFSRDGIDVKLGSMVTKVNE 306
Query: 346 TTITAQC-GDATEDIPYGLLVWATGNAPREVSKNLMAKLEQQNSRRGLLINDKMQLLGAE 404
I+A+ G IPYG++VW+TG R V K+ M ++ Q N RR L ++ +++ G
Sbjct: 307 KDISAKTKGGEVSSIPYGMIVWSTGIGTRPVIKDFMKQIGQGN-RRALATDEWLRVEGT- 364
Query: 405 DSIWAIGDC 413
D+I+A+GDC
Sbjct: 365 DNIYALGDC 373
Score = 52.8 bits (125), Expect = 1e-06
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 15/125 (12%)
Query: 422 TAQVAHQEAEYLTETLKQQYKIDQLKWEISKTTNATETSKLHSKLDRIVKQQKPFKYNHQ 481
TAQVA Q+ YL + D+++ E K+ + + + +PF+Y H
Sbjct: 472 TAQVAAQQGAYLAKCF------DRME-ECEKSPEGPIRMRGEGR-----HRFRPFRYRHL 519
Query: 482 GTLAYIGSEQAIADVAVGESKYQMAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKVYFL 541
G A +G EQ A + + G + W S Y +S+R R+LV DW + +
Sbjct: 520 GQFAPLGGEQTAAQLP---GDWVSIGHSSQWLWYSVYASKQVSWRTRVLVVSDWMRRFIF 576
Query: 542 GRDSS 546
GRDSS
Sbjct: 577 GRDSS 581
>At4g28220 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 559
Score = 273 bits (699), Expect = 4e-73
Identities = 155/368 (42%), Positives = 220/368 (59%), Gaps = 18/368 (4%)
Query: 52 ARRVVSTTLKVSLAALLAGTGYVSY-ELYREANPPPQIPQAATFANGSPRKTLVVLGTGW 110
A R K+ L L+G V+Y + EAN + +K +VVLGTGW
Sbjct: 10 ASRSAPLASKLLLLGTLSGGSIVAYADANEEANKKEE----------HKKKKVVVLGTGW 59
Query: 111 GSVSLLKHLDTSLYNVIVVSPRNYFLFTPLLPSTPVGTVELKSIVEPVRSITRSSPGEVH 170
+S LK LD + Y+V VVSP+NYF FTPLLPS GTVE +SIVE VR+IT+ GE+
Sbjct: 60 AGISFLKDLDITSYDVQVVSPQNYFAFTPLLPSVTCGTVEARSIVESVRNITKKKNGEIE 119
Query: 171 YYEAEAKDIDPVAKTVRIKSATKDH---DYELDLNYDYLVVGVGAQPTTFGIPGVFENAS 227
+EA+ ID V + V + KD E L YDYL+V VGAQ TFG PGV EN
Sbjct: 120 LWEADCFKIDHVNQKVHCRPVFKDDPEASQEFSLGYDYLIVAVGAQVNTFGTPGVLENCH 179
Query: 228 FLKEIPDAQDIRTKIMNNIEKAATLSANDPERKRLLSFVVVGGGPTGVEFAAELQDYVDQ 287
FLKE+ DAQ IR +++ EKA + +R+R L FV+VGGGPTGVEFAAEL D++ +
Sbjct: 180 FLKEVEDAQRIRRGVIDCFEKAILPGLTEEQRRRKLHFVIVGGGPTGVEFAAELHDFIIE 239
Query: 288 DLSKWIPEISKEIKVTLVEALPNILNMFDKSLWQYAQDLFAMEKIDVKLKTMVKNVNSTT 347
D++K P + + +K+TL+++ +ILN FD+ + +A+ F + IDV+ V +V
Sbjct: 240 DITKIYPSVKELVKITLIQSGDHILNTFDERISSFAEQKFTRDGIDVQTGMRVMSVTDKD 299
Query: 348 ITAQCGDATE--DIPYGLLVWATGNAPREVSKNLMAKLEQQNSRRGLLINDKMQLLGAED 405
IT + + E IP+GL++W+TG R V + M ++ Q RR + N+ +Q+ G E
Sbjct: 300 ITVKVKSSGELVSIPHGLILWSTGVGTRPVISDFMEQV-GQGGRRAVATNEWLQVTGCE- 357
Query: 406 SIWAIGDC 413
+++A+GDC
Sbjct: 358 NVYAVGDC 365
>At2g20800 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 582
Score = 258 bits (658), Expect = 2e-68
Identities = 153/364 (42%), Positives = 231/364 (63%), Gaps = 15/364 (4%)
Query: 58 TTLKVSLAALLAGTGYVSYELYREANPPPQIPQA-ATF-ANGSP--RKTLVVLGTGWGSV 113
+T K+ L + +G G V +Y ++NP +I A AT ++G+P +K +VVLG+GW
Sbjct: 19 STSKILLLSTFSGGGGVL--VYSDSNPLKRILHADATLDSDGNPIRKKKVVVLGSGWSGY 76
Query: 114 SLLKHLDTSLYNVIVVSPRNYFLFTPLLPSTPVGTVELKSIVEPVRSITRSSPGEVHYYE 173
S L +L+ Y+V VVSPRN+FLFTPLLPS GTVE +SIVEP+R + R E Y E
Sbjct: 77 SFLSYLNNPNYDVQVVSPRNFFLFTPLLPSVTNGTVEARSIVEPIRGLMRKKGFE--YKE 134
Query: 174 AEAKDIDPVAKTVRIKS---ATKDHDYELDLNYDYLVVGVGAQPTTFGIPGVFENASFLK 230
AE ID K + +S ++ E D++YD L++ VGA+P TF PGV E+A FLK
Sbjct: 135 AECVKIDASNKKIHCRSKEGSSLKGTTEFDMDYDILILAVGAKPNTFNTPGVEEHAYFLK 194
Query: 231 EIPDAQDIRTKIMNNIEKAATLSANDPERKRLLSFVVVGGGPTGVEFAAELQDYVDQDLS 290
E DA +IR +++ E+A+ + + ERK++L FVVVGGGPTGVEF+AEL D++ QD++
Sbjct: 195 EAEDALNIRHSVIDCFERASLPNLTEEERKKILHFVVVGGGPTGVEFSAELHDFLVQDVA 254
Query: 291 KWIPEISKEIKVTLVEALPNILNMFDKSLWQYAQDLFAMEKIDVKLKTMVKNVNSTTITA 350
K P++ + K+TL+EA +ILNMFDK + +A++ F + ID+K +MV V + I+
Sbjct: 255 KIYPKVQEFTKITLLEAGDHILNMFDKRITAFAEEKFQRDGIDLKTGSMVVGVTADEIST 314
Query: 351 QCGDATEDI--PYGLLVWATGNAPREVSKNLMAKLEQQNSRRGLLINDKMQLLGAEDSIW 408
+ + + + PYG++VW+TG R V K+ M ++ Q +R +L D+ + D ++
Sbjct: 315 KERETGKIVSEPYGMVVWSTGIGSRPVIKDFMQQIGQ--GQRRVLATDEWLRVEGCDGVY 372
Query: 409 AIGD 412
A+GD
Sbjct: 373 ALGD 376
Score = 54.3 bits (129), Expect = 5e-07
Identities = 37/125 (29%), Positives = 58/125 (45%), Gaps = 15/125 (12%)
Query: 422 TAQVAHQEAEYLTETLKQQYKIDQLKWEISKTTNATETSKLHSKLDRIVKQQKPFKYNHQ 481
TAQVA Q+ +YL + + K ++ L + + + Q PF+Y H
Sbjct: 471 TAQVASQQGKYLAKCFNKMEKCEK-----------KPEGPLRFRGEGRHRFQ-PFRYRHF 518
Query: 482 GTLAYIGSEQAIADVAVGESKYQMAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKVYFL 541
G+ A +G EQ A++ + G + W S Y +S+R R+LV DW + +
Sbjct: 519 GSFAPLGGEQTAAELP---GDWVSIGHSSQWLWYSVYASKLVSWRTRMLVISDWTRRFVF 575
Query: 542 GRDSS 546
GRDSS
Sbjct: 576 GRDSS 580
>At2g29990 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 508
Score = 253 bits (645), Expect = 7e-67
Identities = 173/462 (37%), Positives = 259/462 (55%), Gaps = 47/462 (10%)
Query: 103 LVVLGTGWGSVSLLKHLDTSLYNVIVVSPRNYFLFTPLLPSTPVGTVELKSIVEPVRSIT 162
+VVLG+GW L+K +DT+LY+V+ VSPRN+ +FTPLL ST VGT+E +S+ EP+ I
Sbjct: 74 VVVLGSGWAGCRLMKGIDTNLYDVVCVSPRNHMVFTPLLASTCVGTLEFRSVAEPISRIQ 133
Query: 163 RS---SPGEVHYYEAEAKDIDPVAKTVRIKSATKDHD----YELDLNYDYLVVGVGAQPT 215
+ PG ++ A +D A V ++ T + ++ + YD LV+ GA+ +
Sbjct: 134 PAISREPGSF-FFLANCSRLDADAHEVHCETLTDGLNTLKPWKFKIAYDKLVIASGAEAS 192
Query: 216 TFGIPGVFENASFLKEIPDAQDIRTKIMNNIEKAATLSANDPERKRLLSFVVVGGGPTGV 275
TFGI GV ENA FL+E+ AQ+IR K++ N+ + T + E++RLL VVVGGGPTGV
Sbjct: 193 TFGIHGVMENAIFLREVHHAQEIRRKLLLNLMLSDTPGISKEEKRRLLHCVVVGGGPTGV 252
Query: 276 EFAAELQDYVDQDLSKWIPEISKEIKVTLVEALPNILNMFDKSLWQYAQDLFAMEKIDVK 335
EF+ EL D++ +D+ + + +I VTL+EA +IL+ FD L +YA + + K V+
Sbjct: 253 EFSGELSDFIMKDVRQRYAHVKDDIHVTLIEA-RDILSSFDDRLRRYA--IKQLNKSGVR 309
Query: 336 -LKTMVKNVNSTTITAQCGDATEDIPYGLLVWATGNAPREVSKNLMAKLEQQNSRRGLLI 394
++ +VK+V S + D TE +PYGLLVW+TG P ++L + R G I
Sbjct: 310 FVRGIVKDVQSQKLILD--DGTE-VPYGLLVWSTGVGPSPFVRSL-GLPKDPTGRIG--I 363
Query: 395 NDKMQLLGAEDSIWAIGDCTFF------PGLFPTAQVAHQEAEYLTETLKQQYKIDQLKW 448
++ M++ +D ++AIGDC+ + P L AQVA +E +YL L
Sbjct: 364 DEWMRVPSVQD-VFAIGDCSGYLETTGKPTLPALAQVAEREGKYLANLLN---------- 412
Query: 449 EISKTTNATETSKLHSKLDRIVKQQKPFKYNHQGTLAYIGSEQAIADVAVGESK----YQ 504
I K S +L PF Y H G++A IG +A+ D+ ESK
Sbjct: 413 AIGKGNGGRANSAKEIELG------VPFVYKHLGSMATIGRYKALVDLR--ESKDAKGIS 464
Query: 505 MAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKVYFLGRDSS 546
M G ++ W+SAYL +S+RNR VA++W + GRD S
Sbjct: 465 MTGFVSWFIWRSAYLTRVISWRNRFYVAINWFTTFVFGRDIS 506
>At1g07180 [C] KOG2495 NADH-dehydrogenase (ubiquinone)
Length = 510
Score = 250 bits (639), Expect = 3e-66
Identities = 171/474 (36%), Positives = 257/474 (54%), Gaps = 49/474 (10%)
Query: 91 AATFANGSPRKTLVVLGTGWGSVSLLKHLDTSLYNVIVVSPRNYFLFTPLLPSTPVGTVE 150
A T PR ++VLG+GW +LK +DTS+Y+V+ VSPRN+ +FTPLL ST VGT+E
Sbjct: 66 APTKEGEKPR--VLVLGSGWAGCRVLKGIDTSIYDVVCVSPRNHMVFTPLLASTCVGTLE 123
Query: 151 LKSIVEPVRSITRS---SPGEVHYYEAEAKDIDPVAKTVRIKSATKDHD----YELDLNY 203
+S+ EP+ I + PG +Y+ A +D V ++ T+ ++ + Y
Sbjct: 124 FRSVAEPISRIQPAISREPGS-YYFLANCSKLDADNHEVHCETVTEGSSTLKPWKFKIAY 182
Query: 204 DYLVVGVGAQPTTFGIPGVFENASFLKEIPDAQDIRTKIMNNIEKAATLSANDPERKRLL 263
D LV+ GA+ +TFGI GV ENA FL+E+ AQ+IR K++ N+ + + E+KRLL
Sbjct: 183 DKLVLACGAEASTFGINGVLENAIFLREVHHAQEIRRKLLLNLMLSEVPGIGEDEKKRLL 242
Query: 264 SFVVVGGGPTGVEFAAELQDYVDQDLSKWIPEISKEIKVTLVEALPNILNMFDKSLWQYA 323
VVVGGGPTGVEF+ EL D++ +D+ + + +I+VTL+EA +IL+ FD L YA
Sbjct: 243 HCVVVGGGPTGVEFSGELSDFIMKDVRQRYSHVKDDIRVTLIEA-RDILSSFDDRLRHYA 301
Query: 324 QDLFAMEKIDVKL-KTMVKNVNSTTITAQCGDATEDIPYGLLVWATGNAPREVSKNLMAK 382
+ + K VKL + +VK V + D TE +PYG LVW+TG P + +
Sbjct: 302 --IKQLNKSGVKLVRGIVKEVKPQKLILD--DGTE-VPYGPLVWSTGVGP----SSFVRS 352
Query: 383 LEQQNSRRGLLINDKMQLLGAEDSIWAIGDCTFF------PGLFPTAQVAHQEAEYLTET 436
L+ G + D+ + + ++AIGDC+ + L AQVA +E +YL
Sbjct: 353 LDFPKDPGGRIGIDEWMRVPSVQDVFAIGDCSGYLESTGKSTLPALAQVAEREGKYLANL 412
Query: 437 LKQQYKIDQLKWEISKTTNATETSKLHSKLDRIVKQQKPFKYNHQGTLAYIGSEQAIADV 496
K + +A E ++ +PF Y H G++A IG +A+ D+
Sbjct: 413 FNVMGKAGG-----GRANSAKE-----------MELGEPFVYKHLGSMATIGRYKALVDL 456
Query: 497 AVGESK----YQMAGSFTFLFWKSAYLGMCLSFRNRILVAMDWAKVYFLGRDSS 546
ESK MAG ++ W+SAYL +S+RNR VA++W + GRD S
Sbjct: 457 R--ESKEGKGISMAGFLSWFIWRSAYLTRVVSWRNRFYVAINWLTTFVFGRDIS 508
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,604,506
Number of Sequences: 60738
Number of extensions: 1291648
Number of successful extensions: 3663
Number of sequences better than 1.0e-05: 11
Number of HSP's better than 0.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 3605
Number of HSP's gapped (non-prelim): 16
length of query: 547
length of database: 30,389,216
effective HSP length: 111
effective length of query: 436
effective length of database: 23,647,298
effective search space: 10310221928
effective search space used: 10310221928
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)