ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV5769 good J KOG3271 Translation, ribosomal structure and biogenesis Translation initiation factor 5A (eIF-5A)
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV5769 1979344 1979814 157
(157 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YJR047c [J] KOG3271 Translation initiation factor 5A (eIF-5A) 285 2e-77
YEL034w [J] KOG3271 Translation initiation factor 5A (eIF-5A) 281 3e-76
SPAC26H5.10c [J] KOG3271 Translation initiation factor 5A (eIF-5A) 243 6e-65
SPBC336.10c [J] KOG3271 Translation initiation factor 5A (eIF-5A) 241 2e-64
Hs4503545 [J] KOG3271 Translation initiation factor 5A (eIF-5A) 209 1e-54
7291729 [J] KOG3271 Translation initiation factor 5A (eIF-5A) 205 2e-53
Hs9966867 [J] KOG3271 Translation initiation factor 5A (eIF-5A) 203 7e-53
Hs13642507 [J] KOG3271 Translation initiation factor 5A (eIF-5A) 200 7e-52
At1g13950 [J] KOG3271 Translation initiation factor 5A (eIF-5A) 190 8e-49
CE00503 [J] KOG3271 Translation initiation factor 5A (eIF-5A) 189 1e-48
CE02249 [J] KOG3271 Translation initiation factor 5A (eIF-5A) 186 9e-48
At1g69410 [J] KOG3271 Translation initiation factor 5A (eIF-5A) 185 2e-47
At1g26630 [J] KOG3271 Translation initiation factor 5A (eIF-5A) 176 2e-44
>YJR047c [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 157
Score = 285 bits (729), Expect = 2e-77
Identities = 138/157 (87%), Positives = 151/157 (95%)
Query: 1 MAEEEHTFETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLV 60
M++EEHTFE A AGAS T+PMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLV
Sbjct: 1 MSDEEHTFENADAGASATYPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLV 60
Query: 61 AIDIFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDIDDGFLSLMTMDGETKDDVRAPEGEL 120
+DIFT KKLEDLSPSTHN+EVP VKR+E+QLLDIDDG+LSLMTMDGETKDDV+APEGEL
Sbjct: 61 TLDIFTGKKLEDLSPSTHNLEVPFVKRSEYQLLDIDDGYLSLMTMDGETKDDVKAPEGEL 120
Query: 121 GDNIQAAFDEGKDLMVTIIAAMGEEAAISFKEAPRSE 157
GD++QAAFDEGKDLMVTII+AMGEEAAISFKEAPRS+
Sbjct: 121 GDSMQAAFDEGKDLMVTIISAMGEEAAISFKEAPRSD 157
>YEL034w [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 157
Score = 281 bits (719), Expect = 3e-76
Identities = 137/157 (87%), Positives = 149/157 (94%)
Query: 1 MAEEEHTFETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLV 60
M++EEHTFETA AG+S T+PMQCSALRKNGFVVIK RPCKIVDMSTSKTGKHGHAKVHLV
Sbjct: 1 MSDEEHTFETADAGSSATYPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLV 60
Query: 61 AIDIFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDIDDGFLSLMTMDGETKDDVRAPEGEL 120
AIDIFT KKLEDLSPSTHNMEVPVVKR E+QLLDIDDGFLSLM MDG+TKDDV+APEGEL
Sbjct: 61 AIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDIDDGFLSLMNMDGDTKDDVKAPEGEL 120
Query: 121 GDNIQAAFDEGKDLMVTIIAAMGEEAAISFKEAPRSE 157
GD++Q AFDEGKDLMVTII+AMGEEAAISFKEA R++
Sbjct: 121 GDSLQTAFDEGKDLMVTIISAMGEEAAISFKEAARTD 157
>SPAC26H5.10c [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 157
Score = 243 bits (621), Expect = 6e-65
Identities = 116/157 (73%), Positives = 138/157 (87%), Gaps = 1/157 (0%)
Query: 1 MAEEEHT-FETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHL 59
MAEEEH FE AGASLTFPMQCSALRKNG VVIKGRPCKIVDMSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 60 VAIDIFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDIDDGFLSLMTMDGETKDDVRAPEGE 119
VA+DIF +K ED+SPSTHNM+VPVVKR E+QL++IDDG+L+LMT DG TKDDVR PEGE
Sbjct: 61 VALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNIDDGYLNLMTTDGTTKDDVRLPEGE 120
Query: 120 LGDNIQAAFDEGKDLMVTIIAAMGEEAAISFKEAPRS 156
LG+ I+ FDEG+DL++T+++AMGEE A++ ++AP S
Sbjct: 121 LGNEIEEGFDEGRDLIITVVSAMGEETALACRDAPSS 157
>SPBC336.10c [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 157
Score = 241 bits (616), Expect = 2e-64
Identities = 115/155 (74%), Positives = 137/155 (88%), Gaps = 1/155 (0%)
Query: 1 MAEEEHT-FETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHL 59
MAEEEH FE AGASLTFPMQCSALRKNG VVIKGRPCKIVDMSTSKTGKHGHAKVH+
Sbjct: 1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHI 60
Query: 60 VAIDIFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDIDDGFLSLMTMDGETKDDVRAPEGE 119
VA+DIF +K ED+SPSTHNM+VPVVKR E+QL++IDDG+L+LMT DG TKDDVR PEGE
Sbjct: 61 VALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNIDDGYLNLMTTDGTTKDDVRLPEGE 120
Query: 120 LGDNIQAAFDEGKDLMVTIIAAMGEEAAISFKEAP 154
LG+ I+ F+EGKDL++T+++AMGEE A++ ++AP
Sbjct: 121 LGNEIEEGFEEGKDLIITVVSAMGEEIALACRDAP 155
>Hs4503545 [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 154
Score = 209 bits (532), Expect = 1e-54
Identities = 96/144 (66%), Positives = 121/144 (83%)
Query: 8 FETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTN 67
FET AGAS TFPMQCSALRKNGFVV+KGRPCKIV+MSTSKTGKHGHAKVHLV IDIFT
Sbjct: 7 FETGDAGASATFPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTG 66
Query: 68 KKLEDLSPSTHNMEVPVVKRTEFQLLDIDDGFLSLMTMDGETKDDVRAPEGELGDNIQAA 127
KK ED+ PSTHNM+VP +KR +FQL+ I DG+LSL+ GE ++D+R PEG+LG I+
Sbjct: 67 KKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSGEVREDLRLPEGDLGKEIEQK 126
Query: 128 FDEGKDLMVTIIAAMGEEAAISFK 151
+D G+++++T+++AM EEAA++ K
Sbjct: 127 YDCGEEILITVLSAMTEEAAVAIK 150
>7291729 [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 159
Score = 205 bits (521), Expect = 2e-53
Identities = 97/152 (63%), Positives = 122/152 (79%), Gaps = 1/152 (0%)
Query: 1 MAEEEHTFETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLV 60
MAE + FET +GAS T+PMQCSALRKNGFV++K RPCKIV+MSTSKTGKHGHAKVH+V
Sbjct: 1 MAELDDQFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMV 60
Query: 61 AIDIFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDI-DDGFLSLMTMDGETKDDVRAPEGE 119
IDIF+NKK ED+ PSTHNM+VP VKR + QL+ I DD FL+LMT G+ ++D++ PEGE
Sbjct: 61 GIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGE 120
Query: 120 LGDNIQAAFDEGKDLMVTIIAAMGEEAAISFK 151
LG+ ++ FD GKDL+ T++ A GEE I+ K
Sbjct: 121 LGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152
>Hs9966867 [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 153
Score = 203 bits (517), Expect = 7e-53
Identities = 94/148 (63%), Positives = 120/148 (80%)
Query: 4 EEHTFETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLVAID 63
+E F T AGAS T+PMQCSALRKNGFVV+KGRPCKIV+MSTSKTGKHGHAKVHLV ID
Sbjct: 3 DEIDFTTGDAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGID 62
Query: 64 IFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDIDDGFLSLMTMDGETKDDVRAPEGELGDN 123
IFT KK ED+ PSTHNM+VP +KR ++QL+ I DG+LSL+T GE ++D++ PEGELG
Sbjct: 63 IFTGKKYEDICPSTHNMDVPNIKRNDYQLICIQDGYLSLLTETGEVREDLKLPEGELGKE 122
Query: 124 IQAAFDEGKDLMVTIIAAMGEEAAISFK 151
I+ ++ G+D+ V+++ AM EE A++ K
Sbjct: 123 IEGKYNAGEDVQVSVMCAMSEEYAVAIK 150
>Hs13642507 [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 154
Score = 200 bits (508), Expect = 7e-52
Identities = 92/144 (63%), Positives = 117/144 (80%)
Query: 8 FETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTN 67
FET AGAS TFPMQCSALRKNGFVV+KG PCKIV+MS SKTGKHGHAKVHLV IDIFT
Sbjct: 7 FETGDAGASATFPMQCSALRKNGFVVLKGWPCKIVEMSASKTGKHGHAKVHLVGIDIFTG 66
Query: 68 KKLEDLSPSTHNMEVPVVKRTEFQLLDIDDGFLSLMTMDGETKDDVRAPEGELGDNIQAA 127
KK ED+ PSTHNM+VP ++R +FQL+ I DG+LSL+ GE +D+R PEG+LG +
Sbjct: 67 KKYEDICPSTHNMDVPNIRRNDFQLIGIQDGYLSLLQDSGEVPEDLRLPEGDLGKETEQK 126
Query: 128 FDEGKDLMVTIIAAMGEEAAISFK 151
+D G+++++T+++AM EEAA++ K
Sbjct: 127 YDCGEEILITVLSAMTEEAAVAIK 150
>At1g13950 [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 158
Score = 190 bits (482), Expect = 8e-49
Identities = 89/154 (57%), Positives = 125/154 (80%), Gaps = 2/154 (1%)
Query: 1 MAEEEHTFETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLV 60
M++EEH FE++ AGAS T+P Q +RKNG++VIK RPCK+V++STSKTGKHGHAK H V
Sbjct: 1 MSDEEHHFESSDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFV 60
Query: 61 AIDIFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDI-DDGFLSLMTMDGETKDDVRAPEGE 119
AIDIFT+KKLED+ PS+HN +VP V RT++QL+DI +DG++SL+T +G TKDD++ P +
Sbjct: 61 AIDIFTSKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGYVSLLTDNGSTKDDLKLPNDD 120
Query: 120 -LGDNIQAAFDEGKDLMVTIIAAMGEEAAISFKE 152
L I++ FD+GKDL+V++++AMGEE + K+
Sbjct: 121 TLLQQIKSGFDDGKDLVVSVMSAMGEEQINALKD 154
>CE00503 [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 161
Score = 189 bits (481), Expect = 1e-48
Identities = 95/151 (62%), Positives = 121/151 (79%), Gaps = 4/151 (2%)
Query: 4 EEHTFETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLVAID 63
+E F++A +GA+ TFP QCSALRKN V+I+GRPCKIV+MSTSKTGKHGHAKVH+VAID
Sbjct: 7 DEEQFDSAESGAAATFPKQCSALRKNEHVMIRGRPCKIVEMSTSKTGKHGHAKVHMVAID 66
Query: 64 IFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDIDDGFLSLMTMDG-ETKDDVRAPEGELGD 122
IFT KKLED+ PSTHNM+VPVVKR E+ L+ I+DGF SLM + E KDD++ PEG+LG+
Sbjct: 67 IFTTKKLEDICPSTHNMDVPVVKRREYILMSIEDGFCSLMDPESCELKDDLKMPEGDLGN 126
Query: 123 NIQAAF--DEGKDLMVTIIAAMGEEAAISFK 151
I+ A DEG ++V ++AA GEEA + +K
Sbjct: 127 TIREALEKDEG-SVLVQVVAACGEEAILGYK 156
>CE02249 [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 161
Score = 186 bits (473), Expect = 9e-48
Identities = 95/152 (62%), Positives = 122/152 (79%), Gaps = 5/152 (3%)
Query: 3 EEEHTFETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLVAI 62
++EH F T +GA+ TFP QCSALRKN V+IKGRPCKIV+MSTSKTGKHGHAKVH+VAI
Sbjct: 7 DDEH-FHTGDSGAAATFPKQCSALRKNEHVMIKGRPCKIVEMSTSKTGKHGHAKVHMVAI 65
Query: 63 DIFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDIDDGFLSLMTMDG-ETKDDVRAPEGELG 121
DIFT+KKLED+ PSTHNM+VPVVKR E+ L+ IDDG+ SLM + E KDD++ P+ ELG
Sbjct: 66 DIFTSKKLEDICPSTHNMDVPVVKRREYLLMAIDDGYCSLMDPESCEQKDDLKLPDTELG 125
Query: 122 DNIQAAF--DEGKDLMVTIIAAMGEEAAISFK 151
I+ A+ DEG ++V +++A+GEEA + +K
Sbjct: 126 QQIRDAYEKDEG-SVLVQVVSAIGEEAILGWK 156
>At1g69410 [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 158
Score = 185 bits (469), Expect = 2e-47
Identities = 88/154 (57%), Positives = 122/154 (79%), Gaps = 2/154 (1%)
Query: 1 MAEEEHTFETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLV 60
M+++EH FE++ AGAS T+P Q +RK G +VIKGRPCK+V++STSKTGKHGHAK H V
Sbjct: 1 MSDDEHHFESSDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFV 60
Query: 61 AIDIFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDI-DDGFLSLMTMDGETKDDVRAPEGE 119
AIDIFT+KKLED+ PS+HN +VP V R ++QL+DI +DGF+SL+T +G TKDD++ P E
Sbjct: 61 AIDIFTSKKLEDIVPSSHNCDVPHVNRVDYQLIDISEDGFVSLLTDNGSTKDDLKLPTDE 120
Query: 120 -LGDNIQAAFDEGKDLMVTIIAAMGEEAAISFKE 152
L ++ F+EGKD++V++++AMGEE + KE
Sbjct: 121 ALLTQLKNGFEEGKDIVVSVMSAMGEEQMCALKE 154
>At1g26630 [J] KOG3271 Translation initiation factor 5A (eIF-5A)
Length = 159
Score = 176 bits (445), Expect = 2e-44
Identities = 84/154 (54%), Positives = 117/154 (75%), Gaps = 2/154 (1%)
Query: 1 MAEEEHTFETAGAGASLTFPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLV 60
M+++EH FE + +GAS T+P +RK G +VIK RPCK+V++STSKTGKHGHAK H V
Sbjct: 1 MSDDEHHFEASESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFV 60
Query: 61 AIDIFTNKKLEDLSPSTHNMEVPVVKRTEFQLLDI-DDGFLSLMTMDGETKDDVRAPEGE 119
AIDIFT KKLED+ PS+HN +VP V R ++QL+DI +DGF+SL+T G TKDD++ P +
Sbjct: 61 AIDIFTAKKLEDIVPSSHNCDVPHVNRVDYQLIDITEDGFVSLLTDSGGTKDDLKLPTDD 120
Query: 120 -LGDNIQAAFDEGKDLMVTIIAAMGEEAAISFKE 152
L ++ FDEGKD++V+++++MGEE + KE
Sbjct: 121 GLTAQMRLGFDEGKDIVVSVMSSMGEEQICAVKE 154
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.133 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,167,327
Number of Sequences: 60738
Number of extensions: 373316
Number of successful extensions: 753
Number of sequences better than 1.0e-05: 13
Number of HSP's better than 0.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 729
Number of HSP's gapped (non-prelim): 13
length of query: 157
length of database: 30,389,216
effective HSP length: 97
effective length of query: 60
effective length of database: 24,497,630
effective search space: 1469857800
effective search space used: 1469857800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)