ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV5806.1 suspect: Pn Z KOG0613 Cytoskeleton Projectin/twitchin and related proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV5806.1 1990866 1990741 -42
(42 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
Hs20143922 [Z] KOG0613 Projectin/twitchin and related proteins 27 5.4
Hs20143918 [Z] KOG0613 Projectin/twitchin and related proteins 27 5.4
Hs20143916 [Z] KOG0613 Projectin/twitchin and related proteins 27 5.4
Hs20143914 [Z] KOG0613 Projectin/twitchin and related proteins 27 5.4
Hs19747267 [Z] KOG0613 Projectin/twitchin and related proteins 27 5.4
>Hs20143922 [Z] KOG0613 Projectin/twitchin and related proteins
Length = 27118
Score = 26.9 bits (58), Expect = 5.4
Identities = 11/36 (30%), Positives = 17/36 (46%)
Query: 7 GVVLAPSAFSIIFGTLPSITATAELVVPKSIPMTDP 42
G + F ++ G +T TA + P IP+T P
Sbjct: 862 GTTVREERFEVLHGREAKVTETARVPAPVEIPVTPP 897
>Hs20143918 [Z] KOG0613 Projectin/twitchin and related proteins
Length = 27051
Score = 26.9 bits (58), Expect = 5.4
Identities = 11/36 (30%), Positives = 17/36 (46%)
Query: 7 GVVLAPSAFSIIFGTLPSITATAELVVPKSIPMTDP 42
G + F ++ G +T TA + P IP+T P
Sbjct: 862 GTTVREERFEVLHGREAKVTETARVPAPVEIPVTPP 897
>Hs20143916 [Z] KOG0613 Projectin/twitchin and related proteins
Length = 5604
Score = 26.9 bits (58), Expect = 5.4
Identities = 11/36 (30%), Positives = 17/36 (46%)
Query: 7 GVVLAPSAFSIIFGTLPSITATAELVVPKSIPMTDP 42
G + F ++ G +T TA + P IP+T P
Sbjct: 908 GTTVREERFEVLHGREAKVTETARVPAPVEIPVTPP 943
>Hs20143914 [Z] KOG0613 Projectin/twitchin and related proteins
Length = 26926
Score = 26.9 bits (58), Expect = 5.4
Identities = 11/36 (30%), Positives = 17/36 (46%)
Query: 7 GVVLAPSAFSIIFGTLPSITATAELVVPKSIPMTDP 42
G + F ++ G +T TA + P IP+T P
Sbjct: 862 GTTVREERFEVLHGREAKVTETARVPAPVEIPVTPP 897
>Hs19747267 [Z] KOG0613 Projectin/twitchin and related proteins
Length = 34350
Score = 26.9 bits (58), Expect = 5.4
Identities = 11/36 (30%), Positives = 17/36 (46%)
Query: 7 GVVLAPSAFSIIFGTLPSITATAELVVPKSIPMTDP 42
G + F ++ G +T TA + P IP+T P
Sbjct: 908 GTTVREERFEVLHGREAKVTETARVPAPVEIPVTPP 943
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.317 0.131 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,221,084
Number of Sequences: 60738
Number of extensions: 51338
Number of successful extensions: 99
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94
Number of HSP's gapped (non-prelim): 5
length of query: 42
length of database: 30,389,216
effective HSP length: 18
effective length of query: 24
effective length of database: 29,295,932
effective search space: 703102368
effective search space used: 703102368
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)