ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV5812.1    suspect: Pn  V     KOG1515   Defense mechanisms                                             Arylacetamide deacetylase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV5812.1 1992463 1991897 -189 
         (189 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g03550 [V] KOG1515 Arylacetamide deacetylase                        30   1.5  
SPAC1B3.13 [R] KOG1963 WD40 repeat protein                             30   2.6  
SPAPB21F2.02 [K] KOG3613 Dopey and related predicted leucine zip...    28   7.5  
Hs17473646 [TV] KOG4297 C-type lectin                                  28   9.8  
CE10802 [S] KOG3017 Defense-related protein containing SCP domain      28   9.8  
CE02825 [P] KOG1291 Mn2+ and Fe2+ transporters of the NRAMP family     28   9.8  

>At2g03550 [V] KOG1515 Arylacetamide deacetylase
          Length = 312

 Score = 30.4 bits (67), Expect = 1.5
 Identities = 18/51 (35%), Positives = 25/51 (48%)

Query: 48  NSLLSGFILFSELFSIANHLLDFRFGQTGRTSNSDGSILVGSLVSSRDVDD 98
           +SL+SG IL    F     + +F     G+T   +GS  V S  S + VDD
Sbjct: 179 DSLISGIILIHPYFWSKTPIDEFEVRDVGKTKGVEGSWRVASPNSKQGVDD 229


>SPAC1B3.13 [R] KOG1963 WD40 repeat protein
          Length = 800

 Score = 29.6 bits (65), Expect = 2.6
 Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)

Query: 130 VVSDQFSFTLENSDFHGGLTSSSSGEDLRLLGWNSSVS 167
           V+S    +TL  S F G L SSSSG D  ++ +NSS S
Sbjct: 621 VISASVQWTLA-SKFTGLLASSSSGNDFAVIDFNSSYS 657


>SPAPB21F2.02 [K] KOG3613 Dopey and related predicted leucine zipper transcription
            factors
          Length = 1687

 Score = 28.1 bits (61), Expect = 7.5
 Identities = 15/52 (28%), Positives = 31/52 (58%), Gaps = 2/52 (3%)

Query: 56   LFSELFSIANHLLDFRFGQTGRTSNSDGSILVGSLVSSRDVDDTIGINIERN 107
            + SEL S A  LL+F +    + SN + + ++G+++S     ++ G++I+ N
Sbjct: 1008 MLSELVSAA--LLEFTYSPGPKKSNLEANGIIGNVISGVFAAESSGVSIDVN 1057


>Hs17473646 [TV] KOG4297 C-type lectin
          Length = 230

 Score = 27.7 bits (60), Expect = 9.8
 Identities = 22/77 (28%), Positives = 31/77 (39%), Gaps = 16/77 (20%)

Query: 28  EFLQRS-----FGIVGQLVTLVGGFNSLLSGFILFSELFSIANHLLDFRFGQTGRTSNSD 82
           EF+Q S     FG +G  VT  G     +    L  ELFS+            G T +  
Sbjct: 146 EFIQNSLKPGHFGWIGLYVTFQGNLWMWIDEHFLVPELFSV-----------IGPTDDRS 194

Query: 83  GSILVGSLVSSRDVDDT 99
            +++ G+ V S D   T
Sbjct: 195 CAVITGNWVYSEDCSST 211


>CE10802 [S] KOG3017 Defense-related protein containing SCP domain
          Length = 207

 Score = 27.7 bits (60), Expect = 9.8
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 136 SFTLENSDFHGGLTSSSSGEDLRLLGWNSSVSWNQSSEDTTQGFNTQGQWSN 187
           S T+ N D  G   SSS   + +  GW S+ + + ++ +T  G  TQ  W+N
Sbjct: 95  SGTIGNLDTFGPAASSSWESEFQQYGWTSN-TLDMNTFNTGIGHATQMAWAN 145


>CE02825 [P] KOG1291 Mn2+ and Fe2+ transporters of the NRAMP family
          Length = 465

 Score = 27.7 bits (60), Expect = 9.8
 Identities = 11/41 (26%), Positives = 22/41 (52%)

Query: 23  VQFFFEFLQRSFGIVGQLVTLVGGFNSLLSGFILFSELFSI 63
           V F F+++  +FG    +  ++G F  L   FIL+  ++ +
Sbjct: 386 VYFIFQYVTENFGTGWLIFVIIGPFTLLYIAFILYLAIYCL 426


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.318    0.134    0.376 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,685,792
Number of Sequences: 60738
Number of extensions: 348930
Number of successful extensions: 891
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 888
Number of HSP's gapped (non-prelim): 6
length of query: 189
length of database: 30,389,216
effective HSP length: 100
effective length of query: 89
effective length of database: 24,315,416
effective search space: 2164072024
effective search space used: 2164072024
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)