ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV5924 good U KOG3479 Intracellular trafficking, secretion, and vesicular transport Mitochondrial import inner membrane translocase, subunit TIM9
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV5924 2036117 2036377 87
(87 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YEL020w-a [U] KOG3479 Mitochondrial import inner membrane transl... 159 6e-40
SPCC24B10.05 [U] KOG3479 Mitochondrial import inner membrane tra... 109 6e-25
At3g46560 [U] KOG3479 Mitochondrial import inner membrane transl... 89 1e-18
7292873 [U] KOG3479 Mitochondrial import inner membrane transloc... 67 4e-12
Hs6912714 [U] KOG3479 Mitochondrial import inner membrane transl... 67 6e-12
CE07987 [U] KOG3479 Mitochondrial import inner membrane transloc... 65 2e-11
7293613 [U] KOG3479 Mitochondrial import inner membrane transloc... 46 8e-06
>YEL020w-a [U] KOG3479 Mitochondrial import inner membrane translocase
subunit TIM9
Length = 87
Score = 159 bits (402), Expect = 6e-40
Identities = 74/87 (85%), Positives = 82/87 (94%)
Query: 1 MDQLNGKEQQEFQKIVEQKQMKDFMRLYSNLVERCFSDCVNDFTSAKLTSKEQNCIMRCS 60
MD LN KEQQEFQK+VEQKQMKDFMRLYSNLVERCF+DCVNDFT++KLT+KEQ CIM+CS
Sbjct: 1 MDALNSKEQQEFQKVVEQKQMKDFMRLYSNLVERCFTDCVNDFTTSKLTNKEQTCIMKCS 60
Query: 61 EKFLKHSERVGQRFQEQNAAMNQTMGR 87
EKFLKHSERVGQRFQEQNAA+ Q +GR
Sbjct: 61 EKFLKHSERVGQRFQEQNAALGQGLGR 87
>SPCC24B10.05 [U] KOG3479 Mitochondrial import inner membrane translocase
subunit TIM9
Length = 84
Score = 109 bits (273), Expect = 6e-25
Identities = 47/79 (59%), Positives = 64/79 (80%)
Query: 1 MDQLNGKEQQEFQKIVEQKQMKDFMRLYSNLVERCFSDCVNDFTSAKLTSKEQNCIMRCS 60
MD+LN KEQ+ +++E KQ+K+++ +YS L + CFSDCV DFTS+KL++KE CI +C+
Sbjct: 1 MDRLNVKEQEHLTQVLEAKQLKEYLNMYSTLTQNCFSDCVQDFTSSKLSNKESECIAKCA 60
Query: 61 EKFLKHSERVGQRFQEQNA 79
+KFLKHSERVGQRF E NA
Sbjct: 61 DKFLKHSERVGQRFAEFNA 79
>At3g46560 [U] KOG3479 Mitochondrial import inner membrane translocase
subunit TIM9
Length = 93
Score = 88.6 bits (218), Expect = 1e-18
Identities = 37/78 (47%), Positives = 57/78 (72%)
Query: 1 MDQLNGKEQQEFQKIVEQKQMKDFMRLYSNLVERCFSDCVNDFTSAKLTSKEQNCIMRCS 60
+D L +++ + +++Q Q++D +R+Y++LVERCF DCV+ FT L +E+ C+MRC+
Sbjct: 9 LDGLPEEDKAKMASMIDQLQLRDSLRMYNSLVERCFVDCVDSFTRKSLQKQEETCVMRCA 68
Query: 61 EKFLKHSERVGQRFQEQN 78
EKFLKH+ RVG RF E N
Sbjct: 69 EKFLKHTMRVGMRFAELN 86
>7292873 [U] KOG3479 Mitochondrial import inner membrane translocase
subunit TIM9
Length = 95
Score = 67.0 bits (162), Expect = 4e-12
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 7/76 (9%)
Query: 19 KQMKDFMRLYSNLVERCFSDCVNDFTSAKLTSKEQNCIMRCSEKFLKHSERVGQRFQE-- 76
K DF+ Y+ L E CF+DC+ DFT+ + E+ C + C EK+LK ++RV QRFQE
Sbjct: 19 KTFSDFLMSYNKLSETCFTDCIRDFTTRDVKDSEEKCSLNCMEKYLKMNQRVSQRFQEFQ 78
Query: 77 ----QNA-AMNQTMGR 87
+NA AM Q G+
Sbjct: 79 VIAHENALAMAQKTGK 94
>Hs6912714 [U] KOG3479 Mitochondrial import inner membrane translocase
subunit TIM9
Length = 89
Score = 66.6 bits (161), Expect = 6e-12
Identities = 27/67 (40%), Positives = 42/67 (62%)
Query: 19 KQMKDFMRLYSNLVERCFSDCVNDFTSAKLTSKEQNCIMRCSEKFLKHSERVGQRFQEQN 78
KQ K+F+ Y+ L E CF DCV DFT+ ++ +E C C +K+LK ++R+ RFQE +
Sbjct: 12 KQFKEFLGTYNKLTETCFLDCVKDFTTREVKPEETTCSEHCLQKYLKMTQRISMRFQEYH 71
Query: 79 AAMNQTM 85
N+ +
Sbjct: 72 IQQNEAL 78
>CE07987 [U] KOG3479 Mitochondrial import inner membrane translocase
subunit TIM9
Length = 90
Score = 65.1 bits (157), Expect = 2e-11
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 22 KDFMRLYSNLVERCFSDCVNDFTSAKLTSKEQNCIMRCSEKFLKHSERVGQRFQEQNAAM 81
+DF+ Y+ + E+CF+ CVN+F S ++ KE++C C +KFLK ++RV QRFQE
Sbjct: 11 RDFLTQYNLVAEQCFNSCVNEFGSRTVSGKEESCANNCLDKFLKMTQRVSQRFQEHQLLN 70
Query: 82 NQTMG 86
Q G
Sbjct: 71 AQANG 75
>7293613 [U] KOG3479 Mitochondrial import inner membrane translocase
subunit TIM9
Length = 117
Score = 46.2 bits (108), Expect = 8e-06
Identities = 19/64 (29%), Positives = 35/64 (54%)
Query: 19 KQMKDFMRLYSNLVERCFSDCVNDFTSAKLTSKEQNCIMRCSEKFLKHSERVGQRFQEQN 78
+ +KDF LY+ + E CFS CV++ + L E C+ RC KF + ++ + + + +
Sbjct: 6 RNLKDFFTLYNKVTELCFSRCVDNLSQRDLGGHEDLCVDRCVTKFARFNQNMMKVYVDVQ 65
Query: 79 AAMN 82
+N
Sbjct: 66 TTIN 69
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.129 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,786,641
Number of Sequences: 60738
Number of extensions: 161207
Number of successful extensions: 574
Number of sequences better than 1.0e-05: 7
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 567
Number of HSP's gapped (non-prelim): 7
length of query: 87
length of database: 30,389,216
effective HSP length: 63
effective length of query: 24
effective length of database: 26,562,722
effective search space: 637505328
effective search space used: 637505328
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)