ORF      STATUS       Function Best COG  Functional category                                          Pathways and functional systems
r_klactV5968    suspect: LH   V     KOG1515  Defense mechanisms                                             Arylacetamide deacetylase

BLASTP 2.2.3 [May-13-2002]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= r_klactV5968 2050726 2049722 -335 
         (335 letters)

Database: KOG eukaryal database 04/03 
           60,738 sequences; 30,389,216 total letters

Searching..................................................done

Color Key for Alignment Scores:   


                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

YGR263c [V] KOG1515 Arylacetamide deacetylase                          82   1e-15

>YGR263c [V] KOG1515 Arylacetamide deacetylase
          Length = 424

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 81/291 (27%), Positives = 128/291 (43%), Gaps = 48/291 (16%)

Query: 71  LFQAYRF--PKHNHSGYWLRTAPVDRKPGVDKKLLLYVHGGGFMFGLIPWMLIVLWTVGK 128
           +FQ ++   PK   + ++    P    P  D  L+ Y HGGG+   L P     L  + +
Sbjct: 139 IFQDHQLNAPKIVSTKFYQYVMPEGFDPTTDPVLVFY-HGGGYALKLTPTSFSFLNNM-R 196

Query: 129 KLDDDVAILVLDYPVMANCPETIDYVWK--------EYLELTETFTEINLIGDSCGGNLI 180
                +AILV DY V A   ++  Y  +        +Y+  T     + ++GDS GGN +
Sbjct: 197 NAFPKMAILVPDYTVTATDDQSKKYPLQILQNVAIFDYVVKTMGCKNVVIMGDSAGGNAV 256

Query: 181 LNILL---KCHENKMTIPKRAIAISPWCNVLDRDSVDVERLNG-YNVDMLSMKVLTVFQN 236
           LNI+L   KCH  +   PK+ IAISPW N       + E + G    D L +K  ++F  
Sbjct: 257 LNIVLYLRKCH--REIYPKKVIAISPWANATFFHEGEKEYMQGTQEWDGLCLKSHSMFGR 314

Query: 237 SYMQNVVDPSQYLKYLNFTSIP---------RETWTEILSDTKLFITYGDLEMFKNQIEL 287
            ++ N  +P+     ++FTS P          + W +IL    + ITYG  E+   Q ++
Sbjct: 315 MFVGN--NPN-----VDFTSDPFVNIEKNFETKMWQDILKKCSVMITYGSDELLSFQNKI 367

Query: 288 F----------INHISPNENLIAEIFPCGSHIEPLVLGYHQSLDKWAKFLS 328
                       NH +    L+      G H  P +L Y +++D+W    S
Sbjct: 368 LAKKMSDASEGCNHFTAKNVLVEH---QGYHTGP-ILNYSRNMDRWTNIPS 414


  Database: KOG eukaryal database 04/03
    Posted date:  Apr 14, 2003  1:07 PM
  Number of letters in database: 30,389,216
  Number of sequences in database:  60,738
  
Lambda     K      H
   0.324    0.141    0.446 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,292,653
Number of Sequences: 60738
Number of extensions: 928220
Number of successful extensions: 1895
Number of sequences better than 1.0e-05: 1
Number of HSP's better than  0.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1892
Number of HSP's gapped (non-prelim): 1
length of query: 335
length of database: 30,389,216
effective HSP length: 107
effective length of query: 228
effective length of database: 23,890,250
effective search space: 5446977000
effective search space used: 5446977000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)