ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV6109 good B KOG0264 Chromatin structure and dynamics Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV6109 2095246 2096496 417
(417 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR195c [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 444 e-124
Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 214 2e-55
7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 204 2e-52
Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 204 3e-52
CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 198 1e-50
SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 186 4e-47
At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 178 1e-44
CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 171 2e-42
At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 160 3e-39
At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 154 2e-37
ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 153 4e-37
Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 147 4e-35
SPAC25H1.06 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 144 2e-34
SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF... 142 1e-33
YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NU... 124 3e-28
At2g19520 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 110 3e-24
Hs17463450 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 109 9e-24
At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/... 105 1e-22
Hs20551282 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 105 2e-22
Hs13631383 [B] KOG0264 Nucleosome remodeling factor subunit CAF1... 105 2e-22
CE27292 [R] KOG0302 Ribosome Assembly protein 87 4e-17
YMR131c [R] KOG0302 Ribosome Assembly protein 87 6e-17
7302218 [R] KOG0302 Ribosome Assembly protein 84 3e-16
At2g19540 [R] KOG0302 Ribosome Assembly protein 78 3e-14
SPBC1711.07 [R] KOG0302 Ribosome Assembly protein 77 5e-14
Hs13899346 [R] KOG0302 Ribosome Assembly protein 74 5e-13
At1g76260 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 72 2e-12
At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily 70 6e-12
7301821 [S] KOG0269 WD40 repeat-containing protein 69 1e-11
Hs7705258 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 64 3e-10
Hs7662370 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 63 7e-10
YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31 62 2e-09
CE28516 [S] KOG0269 WD40 repeat-containing protein 60 5e-09
SPCC63.06 [R] KOG1188 WD40 repeat protein 58 3e-08
7303990 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 58 3e-08
Hs14149987 [S] KOG0269 WD40 repeat-containing protein 57 4e-08
YLR196w [S] KOG0270 WD40 repeat-containing protein 54 6e-07
SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31 54 6e-07
Hs14149696 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 53 7e-07
ECU05g1010 [R] KOG0302 Ribosome Assembly protein 53 7e-07
At5g54520 [S] KOG0282 mRNA splicing factor 52 1e-06
At3g56990 [R] KOG2321 WD40 repeat protein 51 3e-06
7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 51 4e-06
Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor 50 5e-06
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 50 6e-06
Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit ... 50 6e-06
CE16320 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 50 6e-06
CE00901 [R] KOG0266 WD40 repeat-containing protein 50 6e-06
At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31 50 8e-06
At2g20330 [S] KOG0772 Uncharacterized conserved protein contains... 50 8e-06
>YBR195c [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 422
Score = 444 bits (1142), Expect = e-124
Identities = 214/418 (51%), Positives = 282/418 (67%), Gaps = 28/418 (6%)
Query: 14 SGISNEVQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDKQRILLSSFTSQ 73
S I ++Q+RY++WKKNTKLLYDYLNTN++KWPSL+CQFFPD T+D+ RILLSSFTS
Sbjct: 13 SSIPIDLQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDEHRILLSSFTSS 72
Query: 74 QLPQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDC 133
Q P+DE+IYI IST+ H+KWSS+NNFDMDEMEFK +NS + K L ++ I +P+G+C
Sbjct: 73 QKPEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGEC 132
Query: 134 NRCRYMPQNPDIIGTASSNGSVYIFDRTKHG------NKI----------STGRKFEIEC 177
NR RY+PQNPDII ASS+G++YIFDRTKHG +KI S G ++E
Sbjct: 133 NRARYLPQNPDIIAGASSDGAIYIFDRTKHGSTRIRQSKISHPFETKLFGSHGVIQDVEA 192
Query: 178 RNNGDDEQDESLSLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDAN 237
+ + +E+ SLAWN Q E L + SNG+V+VWD+ ++ +++P D
Sbjct: 193 MDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSINSDGT 252
Query: 238 GVNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMIL 297
VNDV+WM H S+ A+C E N + L+D+R + +R H G+N+ FNYKN +IL
Sbjct: 253 AVNDVTWMPTHDSLFAACTEGNAVSLLDLRTKKEKLQSNREKHDGGVNSCRFNYKNSLIL 312
Query: 298 CTGDSQGQLKIWDIRDF-KEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWD 356
+ DS G+L +WDIR+ K PI EHG +S ++W+P +LATA Q+ GLVK+WD
Sbjct: 313 ASADSNGRLNLWDIRNMNKSPIATMEHGTS--VSTLEWSPNFDTVLATAGQEDGLVKLWD 370
Query: 357 ASGEQEDSNAENNMLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANLV 414
S E+ +F HGGHMLGVNDISW HDPW MCSV+NDNS+HIWKPA NLV
Sbjct: 371 TSCEE---------TIFTHGGHMLGVNDISWDAHDPWLMCSVANDNSVHIWKPAGNLV 419
>Hs5032027 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 214 bits (544), Expect = 2e-55
Identities = 131/412 (31%), Positives = 208/412 (49%), Gaps = 38/412 (9%)
Query: 20 VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDKQ----RILLSSFTSQQL 75
+ + Y WKKNT LYD + T+ +WPSL+ Q+ PD T K R++L + TS +
Sbjct: 17 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSDE- 75
Query: 76 PQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNR 135
+ I S+ N +++D ++ EF S+ +E E++I + +G+ NR
Sbjct: 76 --QNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVS---GKIEIEIKINH-EGEVNR 129
Query: 136 CRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNY 195
RYMPQNP II T + + V +FD TKH +K + + R G Q E L+WN
Sbjct: 130 ARYMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRG--HQKEGYGLSWNP 187
Query: 196 QLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANG--------VNDVSWMVN 247
L G L + + + +WD++ +P+ V+DA V DVSW +
Sbjct: 188 NLSGHLLSASDDHTICLWDISA---------VPKEGKVVDAKTIFTGHTAVVEDVSWHLL 238
Query: 248 HTSILASCGESNVIGLIDIRQDTKMDTLHRT-THTDGINAIEFNYKNDMILCTGDSQGQL 306
H S+ S + + + D R + H HT +N + FN ++ IL TG + +
Sbjct: 239 HESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTV 298
Query: 307 KIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASG---EQED 363
+WD+R+ K + +E +D I +QW+P ILA++ L +WD S EQ
Sbjct: 299 ALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRL-NVWDLSKIGEEQSP 356
Query: 364 SNAENNM--LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANL 413
+AE+ LLF+HGGH ++D SW+ ++PW +CSVS DN + +W+ A N+
Sbjct: 357 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENI 408
>7299974 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 204 bits (520), Expect = 2e-52
Identities = 127/412 (30%), Positives = 207/412 (49%), Gaps = 38/412 (9%)
Query: 20 VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDKQ----RILLSSFTSQQL 75
+ + Y WKKNT LYD + T+ +WPSL+ Q+ PD T + K R++L + TS +
Sbjct: 21 INEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSDE- 79
Query: 76 PQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNR 135
+ I S+ + +++D ++ EF S+ +E E++I + +G+ NR
Sbjct: 80 --QNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVC---GKIEIEIKINH-EGEVNR 133
Query: 136 CRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNY 195
RYMPQN +I T + + V +FD TKH +K + + + R G Q E L+WN
Sbjct: 134 ARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRG--HQKEGYGLSWNP 191
Query: 196 QLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANG--------VNDVSWMVN 247
L G L + + + +WD+ P+ V+DA V DV+W +
Sbjct: 192 NLNGYLLSASDDHTICLWDINA---------TPKEHRVIDAKNIFTGHTAVVEDVAWHLL 242
Query: 248 HTSILASCGESNVIGLIDIRQDTKMDTLHRT-THTDGINAIEFNYKNDMILCTGDSQGQL 306
H S+ S + + + D R + H HT +N + FN ++ IL TG + +
Sbjct: 243 HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV 302
Query: 307 KIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASG---EQED 363
+WD+R+ K + +E +D I +QW+P ILA++ L +WD S EQ
Sbjct: 303 ALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRL-HVWDLSKIGEEQST 360
Query: 364 SNAENNM--LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANL 413
+AE+ LLF+HGGH ++D SW+ ++PW +CSVS DN + +W+ A N+
Sbjct: 361 EDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENV 412
>Hs4506439 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 425
Score = 204 bits (518), Expect = 3e-52
Identities = 127/406 (31%), Positives = 203/406 (49%), Gaps = 26/406 (6%)
Query: 20 VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDKQRIL----LSSFTSQQL 75
+ + Y WKKNT LYD + T+ +WPSL+ Q+ P+ T K L L + TS +
Sbjct: 16 INEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDE- 74
Query: 76 PQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNR 135
+ + + N ++ D D+ EF S+ +E E++I + +G+ NR
Sbjct: 75 --QNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVT---GKIECEIKINH-EGEVNR 128
Query: 136 CRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNY 195
RYMPQNP II T + + V +FD TKH K + + R G Q E L+WN
Sbjct: 129 ARYMPQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRG--HQKEGYGLSWNS 186
Query: 196 QLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANG--VNDVSWMVNHTSILA 253
L G L + + V +WD+ K + I + +++ + V DV+W + H S+
Sbjct: 187 NLSGHLLSASDDHTVCLWDINAGPKEGK---IVDAKAIFTGHSAVVEDVAWHLLHESLFG 243
Query: 254 SCGESNVIGLIDIRQDTKMDTLHRT-THTDGINAIEFNYKNDMILCTGDSQGQLKIWDIR 312
S + + + D R +T H HT +N + FN ++ IL TG + + +WD+R
Sbjct: 244 SVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLR 303
Query: 313 DFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAENNM-- 370
+ K + +E +D I + W+P ILA++ L +WD S E+ +AE+
Sbjct: 304 NLKLKLHTFE-SHKDEIFQVHWSPHNETILASSGTDRRL-NVWDLSKIGEEQSAEDAEDG 361
Query: 371 ---LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANL 413
LLF+HGGH ++D SW+ ++PW +CSVS DN + IW+ A N+
Sbjct: 362 PPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQIWQMAENI 407
>CE16234 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 417
Score = 198 bits (503), Expect = 1e-50
Identities = 128/419 (30%), Positives = 204/419 (48%), Gaps = 31/419 (7%)
Query: 11 ELGSGISNEVQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDKQ---RILL 67
E G+ Y WKKNT LYD + T+ +WPSLS Q+ PD N R++L
Sbjct: 5 EDGTSEDRVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKDNSDHTIHRLIL 64
Query: 68 SSFTSQQLPQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRIT 127
+ TS + + I I + +D + E+ ++ N K +E ++RI
Sbjct: 65 GTHTSDE---QNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAV--NGK-VEPDIRIN 118
Query: 128 YPDGDCNRCRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDE 187
+ +G+ NR RYMPQ +II T S + VYIFD KH + + F R G + E
Sbjct: 119 H-EGEVNRARYMPQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTFNPLIRLKGHTK--E 174
Query: 188 SLSLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPE----RESVMDANGVNDVS 243
L+WN EG + + + V WD+ ++ + ESV V DV+
Sbjct: 175 GYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESV-----VEDVA 229
Query: 244 WMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQ 303
W V H + S G+ + + D+R T + H+ +N + FN ++ IL TG +
Sbjct: 230 WHVLHDGVFGSVGDDKKLLIWDVRTSTPGHCID--AHSAEVNCLAFNPYSEFILATGSAD 287
Query: 304 GQLKIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQED 363
+ +WD+R+ + + +E +D I +QW+P ILA++ L +WD S ED
Sbjct: 288 KTVALWDLRNLRMKLHSFE-SHRDEIFQVQWSPHNETILASSGTDKRL-HVWDLSKIGED 345
Query: 364 SNAENNM-----LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANLVEQL 417
+AE+ LLF+HGGH ++D SW+ ++PW +CSVS DN + +W+ A N+ ++
Sbjct: 346 QSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEV 404
>SPCC1672.10 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 430
Score = 186 bits (473), Expect = 4e-47
Identities = 130/433 (30%), Positives = 214/433 (49%), Gaps = 43/433 (9%)
Query: 1 MSELIIEEPP----ELGSGISNE--VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFP 54
MSE ++++ P EL + I + +Q+ Y WK+N LYD + T+ +WPSL+ Q+ P
Sbjct: 1 MSEEVVQDAPLENNELNAEIDLQKTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLP 60
Query: 55 DRTLTNDK----QRILLSSFTSQQLPQDESIYIGSISTMNHMKWSSIN--NFDMDEMEFK 108
D+ QR++L + TS + N+++ +S+ NFD D EF
Sbjct: 61 DKKTIPGTDYSIQRLILGTHTSG-------------NDQNYLQIASVQLPNFDEDTTEFT 107
Query: 109 ---LDNSLKLNDKTLEEEVRITYPDGDCNRCRYMPQNPDIIGTASSNGSVYIFDRTKHGN 165
+ + T+E +I + DGD NR RYMPQ P+II T G+ YIFD T H +
Sbjct: 108 PSTIRRAQATGSYTIEISQKIPH-DGDVNRARYMPQKPEIIATMGEGGNAYIFDTTCH-D 165
Query: 166 KISTGRKFEIECRNNGDDEQDESLSLAWNYQLEGTLATCQSNGKVKVWDL--TKFDKSKQ 223
++TG E L WN L G LAT + + +WD+ F S+
Sbjct: 166 ALTTGEALPQAVLKG---HTAEGFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSET 222
Query: 224 RMEIPERESVMDANGVNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLH-RTTHTD 282
++ P + + VNDV + H ++LAS + + + D R + + + H+
Sbjct: 223 KVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSK 282
Query: 283 GINAIEFNYKNDMILCTGDSQGQLKIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQIL 342
INA+ N ND +L T + + +WD+R+ + + E G +D + ++W+P IL
Sbjct: 283 AINAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLE-GHEDEVYGLEWSPHDEPIL 341
Query: 343 ATADQQSGLVKIWDAS--GEQ---EDSNAENNMLLFVHGGHMLGVNDISWSQHDPWTMCS 397
A++ V IWD GE+ ED+ + LLF+HGGH +++ SW ++ W + S
Sbjct: 342 ASSSTDR-RVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTNRISEFSWCPNERWVVGS 400
Query: 398 VSNDNSIHIWKPA 410
+++DN + IW P+
Sbjct: 401 LADDNILQIWSPS 413
>At5g58230 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 178 bits (452), Expect = 1e-44
Identities = 111/406 (27%), Positives = 197/406 (48%), Gaps = 26/406 (6%)
Query: 20 VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDK----QRILLSSFTSQQL 75
+ + Y WKKNT LYD + T+ +WPSL+ ++ PDR + K Q+++L + TS+
Sbjct: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKDYSVQKMILGTHTSESE 76
Query: 76 PQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNR 135
P + + + S +D D EF + +++ DG+ NR
Sbjct: 77 PN--YLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQQ----INHDGEVNR 130
Query: 136 CRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNY 195
RYMPQNP II T + N VY+FD +KH +K + + G E L+W+
Sbjct: 131 ARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRG--HSSEGYGLSWSK 188
Query: 196 QLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANG--VNDVSWMVNHTSILA 253
+G L + + ++ +WD+ K+K + + + A+ V DV+W + H +
Sbjct: 189 FKQGHLLSGSDDAQICLWDINATPKNKSL----DAQQIFKAHEGVVEDVAWHLRHEYLFG 244
Query: 254 SCGESNVIGLIDIRQDTKMDTLHRTT-HTDGINAIEFNYKNDMILCTGDSQGQLKIWDIR 312
S G+ + + D+R + + H+ +N + FN N+ ++ TG + +K++D+R
Sbjct: 245 SVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLR 304
Query: 313 DFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAENNM-- 370
+ ++ ++ + + WNP+ ILA+ L+ +WD S E+ E+
Sbjct: 305 KLSTALHTFD-SHKEEVFQVGWNPKNETILASCCLGRRLM-VWDLSRIDEEQTVEDAEDG 362
Query: 371 ---LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANL 413
LLF+HGGH ++D SW+ + W + SV+ DN + IW+ A N+
Sbjct: 363 PPELLFIHGGHTSKISDFSWNPCEDWVISSVAEDNILQIWQMAENI 408
>CE11860 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 412
Score = 171 bits (432), Expect = 2e-42
Identities = 117/411 (28%), Positives = 199/411 (47%), Gaps = 32/411 (7%)
Query: 19 EVQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDKQ----RILLSSFTSQQ 74
E + + WKKN LYD + T +WPSLS Q+ PD T T + R++ + T
Sbjct: 9 ETSKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGG 68
Query: 75 LPQDESIYIGSIST----MNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPD 130
+ I +I+T + KW S + +E + S D E++I +P
Sbjct: 69 VQNHLMISKFTITTDTPEFDDAKWDS----EREEFGGYGEGSAAKWDT----EIKINHP- 119
Query: 131 GDCNRCRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLS 190
G+ +R RYMP NP II + + VYIFD TKH ++ KF + R G + E
Sbjct: 120 GEVHRARYMPHNPFIIASRGPSDDVYIFDYTKHPSE-PKDTKFRPQLRLKG--HEGEGYG 176
Query: 191 LAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTS 250
++W+ EG L T +G + WD+ +++ +P+ + ++ DVS+ H
Sbjct: 177 MSWSNTREGHLLTAGDDGMICHWDINA-NQTISGQIVPQSKFKGHSSNAEDVSFHALHNF 235
Query: 251 ILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWD 310
+ S G+ + L D+RQ L HT +N I FN ++ IL TG + +WD
Sbjct: 236 VFGSVGDDRKLNLWDLRQSKPQ--LTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWD 293
Query: 311 IRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAENNM 370
+R+ ++ + +H + D I + ++P +LA++ ++ +WD S Q+ S++
Sbjct: 294 MRNMRKKMYTLKHHN-DEIFQVSFSPHYETVLASSGSDDRVI-VWDISKIQDPSSSSAAS 351
Query: 371 -------LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANLV 414
++F+H GH V D SW+ + PWT+CS N++ +W+ + +LV
Sbjct: 352 SDSVPPEVIFIHAGHTGKVADFSWNPNRPWTICSSDEFNALQVWEVSNSLV 402
>At2g16780 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 415
Score = 160 bits (406), Expect = 3e-39
Identities = 112/422 (26%), Positives = 206/422 (48%), Gaps = 43/422 (10%)
Query: 7 EEPPELGSGISNEVQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPD--RTLTNDK-- 62
E E G G +V++ ++ WKKNT LYD L ++ +WPSL+ + P D
Sbjct: 4 EGKEETGMG---QVEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYF 60
Query: 63 --QRILLSSFTSQQLPQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTL 120
+++L + TS + + + + T I + D K++ +
Sbjct: 61 GVHKLILGTHTSGSA--QDFLMVADVVTPTPNAEPGIGGANQDPFIPKVE---------I 109
Query: 121 EEEVRITYPDGDCNRCRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNN 180
+ +R+ DG+ NR R MPQ P ++G +S V++FD KH K T + + + R
Sbjct: 110 RQRIRV---DGEVNRARCMPQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLV 165
Query: 181 GDDEQDESLSLAWNYQLEGTLATCQSNGKVKVWDL--TKFDKSKQRMEIPERESVMDANG 238
G D+ E L+W+ EG L + + K+ +WD+ T DK M + E +
Sbjct: 166 GHDK--EGYGLSWSPFKEGYLLSGSQDQKICLWDVSATPQDKVLNAMFVYEGHE----SA 219
Query: 239 VNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILC 298
+ DVSW + + ++ S GE + + D R + + H +N + FN N+ +L
Sbjct: 220 IADVSWHMKNENLFGSAGEDGRLVIWDTRTNQMQHQVK--VHEREVNYLSFNPFNEWVLA 277
Query: 299 TGDSQGQLKIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDAS 358
T S + ++D+R P+ + + + ++W+P +LA++ + L+ +WD +
Sbjct: 278 TASSDSTVALFDLRKLNAPLHVMSSHEGE-VFQVEWDPNHETVLASSGEDRRLM-VWDLN 335
Query: 359 --GEQE---DSNAENNM--LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAA 411
GE++ + +AE+ LLF HGGH ++D +W++++PW + SV+ DNS+ +W+ A
Sbjct: 336 RVGEEQLEIELDAEDGPPELLFSHGGHKAKISDFAWNKNEPWVIASVAEDNSLQVWQMAE 395
Query: 412 NL 413
++
Sbjct: 396 SI 397
>At4g35050 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 424
Score = 154 bits (389), Expect = 2e-37
Identities = 100/414 (24%), Positives = 206/414 (49%), Gaps = 40/414 (9%)
Query: 18 NEVQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDKQ------RILLSSFT 71
++V++ ++ WK+NT LYD + ++ +WPSL+ + P + K +++L + T
Sbjct: 13 DQVEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHT 72
Query: 72 SQQLPQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDG 131
S + + + + + D + + K++ +++++R+ DG
Sbjct: 73 SGGA--QDFLMVADVVIPTPDAEPGLGGRDQEPIVPKVE---------IKQKIRV---DG 118
Query: 132 DCNRCRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSL 191
+ NR R MPQ P ++G +S V++FD + K T + + + R G ++ E L
Sbjct: 119 EVNRARCMPQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHEQ--EGYGL 175
Query: 192 AWNYQLEGTLATCQSNGKVKVWDL--TKFDKSKQRMEIPERESVMDANGVNDVSWMVNHT 249
AW+ EG L + + ++ +WD+ T DK M + E + + DV+W + +
Sbjct: 176 AWSSFKEGYLLSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSI----IEDVAWHMKNE 231
Query: 250 SILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIW 309
+I S G+ + + D+R + + H IN + FN N+ +L T S + ++
Sbjct: 232 NIFGSAGDDCQLVIWDLRTNQMQHQVK--VHEREINYLSFNPFNEWVLATASSDSTVALF 289
Query: 310 DIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDAS--GEQE---DS 364
D+R P+ + + + ++W+P +LA++ + L+ +WD + G+++ +
Sbjct: 290 DLRKLTAPLHVLSKHEGE-VFQVEWDPNHETVLASSGEDRRLM-VWDINRVGDEQLEIEL 347
Query: 365 NAENNM--LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANLVEQ 416
+AE+ LLF HGGH ++D +W++ +PW + SV+ DNS+ +W+ A ++ +
Sbjct: 348 DAEDGPPELLFSHGGHKAKISDFAWNKDEPWVISSVAEDNSLQVWQMAESIYRE 401
>ECU07g0750 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 384
Score = 153 bits (387), Expect = 4e-37
Identities = 112/400 (28%), Positives = 188/400 (47%), Gaps = 42/400 (10%)
Query: 20 VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFP----DRTLTNDKQRILLSSFTSQQL 75
V + Y WKKN LYD + ++T +WPSLS Q+FP D QR+LLS+ TS
Sbjct: 11 VNEEYKIWKKNVPYLYDLMFSHTLEWPSLSVQWFPDVRRDEEAGRTTQRLLLSTHTSGS- 69
Query: 76 PQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNR 135
++E I I + + S+N +M K+ + + D + NR
Sbjct: 70 -EEEYILIAKVEFPDEFD-ESLNEEVGGDMRLKIIQRISIMD--------------EANR 113
Query: 136 CRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNY 195
RY P +++ S ++++D TKH + R ++ R + L+WN+
Sbjct: 114 VRYNPSACNVLAVRSDLPDIHVYDYTKHLSHEKIPRP-DMVLRGHSAG----GFGLSWNH 168
Query: 196 QLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASC 255
G LA C G+V V+D+++ S + R VND ++ +L+S
Sbjct: 169 LNPGELAGCGEGGEVCVFDVSQESSSISPTVVLRRHE----TAVNDCAFSFFDKKLLSSA 224
Query: 256 GESNVIGLIDIRQDTKMDTLH--RTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRD 313
G+ ++ L D R + D +H HT I ++ F+ + ++ T G +K+WD R
Sbjct: 225 GDGGMVVLWDTRSE---DCIHAIEEAHTSDILSVRFSPLDGNVIATSSCDGSVKVWDRRS 281
Query: 314 FKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWD---ASGE-QEDSNAEN- 368
+P+ +D +S ++W+P ++LA+ ++ +WD A E E+ AE
Sbjct: 282 LSQPLHILLGHSKDVVS-VEWSPHNDKVLASGSTDRRVI-VWDLGQAGAEVPEEYKAEGP 339
Query: 369 NMLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWK 408
+ F+HGGH V DISW+ +P+ + SVS DN + IW+
Sbjct: 340 PEMKFLHGGHTSTVCDISWNPAEPFEIASVSEDNILQIWQ 379
>Hs22048320 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 345
Score = 147 bits (370), Expect = 4e-35
Identities = 92/301 (30%), Positives = 150/301 (49%), Gaps = 16/301 (5%)
Query: 120 LEEEVRITYPDGDCNRCRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRN 179
+E E++I + +G+ NR RYMPQN II T + + V +FD TK+ +K + + R
Sbjct: 30 IEIEIKINH-EGEVNRARYMPQNSCIIKTKTPSSDVLVFDYTKYPSKPDPSGECNPDLRL 88
Query: 180 NGDDEQDESLSLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANG- 238
G Q E L+WN L G L + + V +WD++ K + + ++ +
Sbjct: 89 CG--HQKEGYGLSWNPNLSGHLLSASDDHTVCLWDISAIPKEGK----VDARTIFTGHTA 142
Query: 239 -VNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRT-THTDGINAIEFNYKNDMI 296
V DV W + H S+ + + + D R H +T +N + FN + I
Sbjct: 143 VVEDVFWNLLHESLFRLVADDQKLMIWDTRSKNTSKPSHSVDAYTAEVNCLSFNPYGEFI 202
Query: 297 LCTGDSQGQLKIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWD 356
L TG + + +WD+R+ K + +E +D I +QW+P ILA++ GL +WD
Sbjct: 203 LATGSADKTVALWDLRNLKLKVHSFE-SHKDEIFQVQWSPHNETILASSGTDHGL-NVWD 260
Query: 357 ASG---EQEDSNAENNML-LFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAAN 412
S EQ +AE+ LF+HGGH + D S + +PW +CSVS +N + +W+ A N
Sbjct: 261 LSKITEEQSPEDAEDRPPELFIHGGHTAKIPDFSLNPSEPWMICSVSENNIMEVWQMAEN 320
Query: 413 L 413
+
Sbjct: 321 I 321
>SPAC25H1.06 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 408
Score = 144 bits (363), Expect = 2e-34
Identities = 115/411 (27%), Positives = 189/411 (45%), Gaps = 40/411 (9%)
Query: 16 ISNEVQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDK----QRILLSSFT 71
+ N++ + + WKKN+K LY+ L T T WPSLS Q+ +K R+LL +
Sbjct: 16 LENQISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHA 75
Query: 72 SQQLPQDESIYIGSISTMNHMKWSSINNFDMDEME---FKLDNSLKLNDKTLEEEVRITY 128
++ +P + + N + +++ D E + + +S K + RI +
Sbjct: 76 AEGMPNFLQLADLDLPDFNQTILDPVKHYNEDTGELGGYSMQHSCKF-----QISQRILH 130
Query: 129 PDGDCNRCRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDES 188
+GD NR R+MPQNP+II T SS G+ YIFDRTK+ + +F G + E
Sbjct: 131 -NGDVNRVRHMPQNPNIIATMSSCGNAYIFDRTKYTS--MPAEEFLPNISLIG--HKKEG 185
Query: 189 LSLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNH 248
L+WN Q L T ++ K+ WDL F + R P ++ D + VNDV + +H
Sbjct: 186 FGLSWNRQQNCRLVTAANDSKILEWDLNNFSRD-TRCLTPVKDFHYDDSPVNDVEYHPHH 244
Query: 249 TSILASCGESNVIGLIDIR-QDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLK 307
T++ + ++ + + D R Q T T+ ++ + ++ N + G Q L+
Sbjct: 245 TNLYIAVNDNGIAFICDNRLQQTCSKTVKA---SNPLFSVRHNPSIATLFALGSEQ-DLQ 300
Query: 308 IWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGE-----QE 362
+WD+R+ + + D ++P L + L W SG QE
Sbjct: 301 LWDLRNLNKSVFNTSEDLSDN------RLKVPSRLTLGG--TSLSWSWRHSGRIVSACQE 352
Query: 363 DSNAEN----NMLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKP 409
N N L FVH GH VN++ + + + SV++DN +HIWKP
Sbjct: 353 YCYVWNFNKANPLEFVHAGHKGTVNEVDFDPFEAQCIASVADDNELHIWKP 403
>SPAC29A4.18 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 431
Score = 142 bits (357), Expect = 1e-33
Identities = 106/423 (25%), Positives = 192/423 (45%), Gaps = 49/423 (11%)
Query: 15 GISNE--VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTND----KQRILLS 68
GI+ E + + Y WKKN+ LYD + T +WP +S Q++P++ + + +Q++ L
Sbjct: 19 GINQEKCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQQIFAEHGYTEQKMFLG 78
Query: 69 ----------SFTSQQLPQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDK 118
+ S QLP Y+ M+ +S + ++SL++N
Sbjct: 79 VRADVGKYLLAVASIQLP-----YLNQTVPPTTMEGASAGD----------ESSLRVNIS 123
Query: 119 TLEEEVRITYPDGDCNRCRYMPQNPDIIGTASS-NGSVYIFDRTKHGNKISTGRKFEIEC 177
L ++P+ C+ + MPQ+ + T + + V +FD+ S+ + ++
Sbjct: 124 NL-----YSHPESVCS-AKLMPQDDSCVATVGNYHNDVLVFDKESF-ESYSSASESPLKP 176
Query: 178 RNNGDDEQDESLSLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDAN 237
+ S+ WN+ +GTL + + + WDL +++S + S +
Sbjct: 177 KYRLTKHTQPCTSVCWNFLSKGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQ 236
Query: 238 GVNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDG--INAIEFNYKNDM 295
V+DV + H +LAS + + DIR+ R+ H I+++ FN ND
Sbjct: 237 -VSDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDF 295
Query: 296 ILCTGDSQGQLKIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIW 355
IL T + + +WD+R+ + + E G +D ++ I ++P ILA+ + +W
Sbjct: 296 ILATCSTDKTIALWDLRNLNQRLHTLE-GHEDIVTKISFSPHEEPILASTSADRRTL-VW 353
Query: 356 DASGEQEDSNAENNM-----LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPA 410
D S ED AE LLF+HGGH D+ W + WTM + + DN + IW P+
Sbjct: 354 DLSRIGEDQPAEEAQDGPPELLFMHGGHTSCTIDMDWCPNYNWTMATAAEDNILQIWTPS 413
Query: 411 ANL 413
++
Sbjct: 414 RSI 416
>YEL056w [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 401
Score = 124 bits (311), Expect = 3e-28
Identities = 92/406 (22%), Positives = 194/406 (47%), Gaps = 41/406 (10%)
Query: 20 VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTND----KQRILLSSFTSQQL 75
V + Y WK N L+YD+++ WPSL+ Q+ P D KQ +++ + TS +
Sbjct: 10 VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGE- 68
Query: 76 PQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNR 135
E Y+ + +N K N +E + +SL + + + + + R
Sbjct: 69 ---EENYL-KFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEE-EITR 123
Query: 136 CRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNY 195
RYMPQ+P+I+ T + G+V+++ R++ + + KF +D +L+++
Sbjct: 124 ARYMPQDPNIVATINGQGTVFLYSRSEG---LQSTLKFH----------KDNGYALSFST 170
Query: 196 QLEGTLATCQSNGKVKVWDL-TKFDKSKQRMEIPERE-SVMDANGVNDVSWMVNHTSILA 253
++G L + + V +W++ + D +K P R + + ++ +ND W + +
Sbjct: 171 LVKGRLLSGSDDHTVALWEVGSGGDPTK-----PVRTWNDLHSDIINDNKWHNFNKDLFG 225
Query: 254 SCGESNVIGLIDIR-QDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIR 312
+ E +++ + D+R +T +DT+ N + F++ + +L + ++D+R
Sbjct: 226 TVSEDSLLKINDVRANNTTIDTVKCP---QPFNTLAFSHHSSNLLAAAGMDSYVYLYDLR 282
Query: 313 DFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDAS---GEQEDSNAENN 369
+ KEP+ G +D ++ ++++ + ++ ++ + L+ +WD EQ +AE+
Sbjct: 283 NMKEPLHHMS-GHEDAVNNLEFSTHVDGVVVSSGSDNRLM-MWDLKQIGAEQTPDDAEDG 340
Query: 370 M--LLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANL 413
+ L+ VH GH VND + PW + S +N + +WK + +L
Sbjct: 341 VPELIMVHAGHRSSVNDFDLNPQIPWLVASAEEENILQVWKCSHSL 386
>At2g19520 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 507
Score = 110 bits (276), Expect = 3e-24
Identities = 105/432 (24%), Positives = 184/432 (42%), Gaps = 55/432 (12%)
Query: 17 SNEVQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFP--DRTLTNDKQRILLSSFTSQQ 74
S V ++Y+ WK +LYD+L + WPSLSC++ P ++ ++QR+ LS T
Sbjct: 61 SPSVDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNRQRLYLSEQTDGS 120
Query: 75 LPQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCN 134
+P I + I+ F+ + +++ I +P G+ N
Sbjct: 121 VPNTLVIANCEVVKPRVAAAEHISQFNEEA-----------RSPFVKKYKTIIHP-GEVN 168
Query: 135 RCRYMPQNPDIIGTASSNGSVYIFDRTKHGNK-------------ISTGRKFEIE----- 176
R R +PQN I+ T + + V I+D N+ I TG + E
Sbjct: 169 RIRELPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAM 228
Query: 177 CRNNG---DDEQDESLSLAWNYQLEGTL--ATCQSNGKVKVWDLTKFDKSKQRMEIPERE 231
C +D+S+ L W+ Q T +S+G + DK++ P
Sbjct: 229 CPTEPFVLSGGKDKSVVL-WSIQDHITTIGTDSKSSGSIIKQTGEGTDKNESPTVGPRGV 287
Query: 232 SVMDANGVNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNY 291
+ V DV++ S G+ + + L D R T T H ++ +++N
Sbjct: 288 YHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNP 347
Query: 292 KNDMILCTGDSQGQLKIWDIRDFK-----EPIKEWEHGDQDPISAIQWNPQIPQILATAD 346
+D ++ TG + ++++D R PI ++E G + + +QW+P + ++
Sbjct: 348 HDDNLILTGSADNTVRLFDRRKLTANGVGSPIYKFE-GHKAAVLCVQWSPDKSSVFGSS- 405
Query: 347 QQSGLVKIWDAS--GEQEDSNAENNM-LLFVHGGHMLGVNDISWSQHDPWTMCSVSND-- 401
+ GL+ IWD ++ D A++ L F H GH V D W+ DPWT+ SVS+D
Sbjct: 406 AEDGLLNIWDYDRVSKKSDRAAKSPAGLFFQHAGHRDKVVDFHWNASDPWTIVSVSDDCE 465
Query: 402 -----NSIHIWK 408
++ IW+
Sbjct: 466 TTGGGGTLQIWR 477
>Hs17463450 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 396
Score = 109 bits (272), Expect = 9e-24
Identities = 106/420 (25%), Positives = 166/420 (39%), Gaps = 83/420 (19%)
Query: 20 VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDKQRILLSSFTSQQLPQDE 79
+ + Y WKKNT LYD + T+ +WPSL+ Q+ PD T K F+ QL
Sbjct: 17 INEEYKKWKKNTPFLYDLVLTHALEWPSLTAQWLPDVTRPEGKD------FSIHQLVLGT 70
Query: 80 SIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNRCRYM 139
++ NH+ +S+ D+ +F
Sbjct: 71 C----TLDEQNHLVIASVQ-LPNDDTQF-------------------------------- 93
Query: 140 PQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESL---------S 190
+ S Y ++ + G S K EIE N + E ++ L S
Sbjct: 94 ------------DASHYNTEKGEFGGFYSVRGKIEIEININHEGEVNKILLESAIQTCVS 141
Query: 191 LAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDAN--------GVNDV 242
+ + G L T S G V +T + RE V+D V DV
Sbjct: 142 VDIRRKAMGFLGTQISVGTYLVLQMTTPAACGTAVLSQRREKVVDVKIIFTGHTAVVEDV 201
Query: 243 SWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRT-THTDGINAIE---FNYKNDMILC 298
SW + H S+ S + + + D ++ H HT + F + IL
Sbjct: 202 SWHLLHESLFGSVADDQKLMIWDTCSNSASKPSHSVDAHTAEVTLTLLPLFQSLYEFILA 261
Query: 299 TGDSQGQLKIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDAS 358
TG + + + D+R+ K + +E +D I +QW+P ILA++ L +WD S
Sbjct: 262 TGSADKTVALRDLRNLKLKLHSFELL-KDKIFQVQWSPHNETILASSGTNHRL-NVWDLS 319
Query: 359 --GEQ---EDSNAENNMLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANL 413
GE+ ED LLF+HGGH + D S + ++PW +CSV DN + +W+ A N+
Sbjct: 320 KIGEKQSPEDKKDRPPELLFIHGGHTAKIPDFSGNPNEPWVICSVPEDNIMQVWQMAENI 379
>At4g29730 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 496
Score = 105 bits (262), Expect = 1e-22
Identities = 99/432 (22%), Positives = 185/432 (41%), Gaps = 62/432 (14%)
Query: 20 VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDK-QRILLSSFTSQQLPQD 78
V Y+ WK +LYD +T WPSLSC++ P K QR+ LS T+ +P
Sbjct: 54 VDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSKTQRLYLSEQTNGSVPN- 112
Query: 79 ESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVR----ITYPDGDCN 134
++ I + T+N + +F + ++ LN+K V+ I +P G+ N
Sbjct: 113 -TLVIANCETVNRQ----VISFSLPKL---------LNEKAHSPFVKKYKTIIHP-GEVN 157
Query: 135 RCRYMPQNPDIIGTASSNGSVYIFDRTKHGNKIST----GRKFEIECRNNGDDEQ----- 185
R R +PQN I+ T + + + I++ ++ + + ++ + DD +
Sbjct: 158 RIRELPQNSKIVATHTDSPDILIWNTETQPDRYAVLGAPDSRPDLLLIGHQDDAEFALAM 217
Query: 186 ------------DESLSLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESV 233
D+S+ L WN Q T+A S + T K +
Sbjct: 218 CPTEPFVLSGGKDKSVIL-WNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGI 276
Query: 234 MDANG--VNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNY 291
+ + V DV++ + S G+ + + L D R T H ++ +++N
Sbjct: 277 YNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNP 336
Query: 292 KNDMILCTGDSQGQLKIWDIRDFKE-----PIKEWEHGDQDPISAIQWNPQIPQILATAD 346
++ ++ TG + ++++D R+ P+ ++E G + + +QW+P + ++
Sbjct: 337 HDNNLILTGSADNTVRVFDRRNLTSNGVGSPVYKFE-GHRAAVLCVQWSPDKSSVFGSS- 394
Query: 347 QQSGLVKIWDASG---EQEDSNAENNMLLFVHGGHMLGVNDISWSQHDPWTMCSVSND-- 401
+ GL+ IWD + E + + L F H GH V D WS +PWT+ SVS++
Sbjct: 395 AEDGLLNIWDCDRVGKKSERATKTPDGLFFQHAGHRDKVVDFHWSLLNPWTIVSVSDNCE 454
Query: 402 -----NSIHIWK 408
++ IW+
Sbjct: 455 SIGGGGTLQIWR 466
>Hs20551282 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 356
Score = 105 bits (261), Expect = 2e-22
Identities = 85/352 (24%), Positives = 152/352 (43%), Gaps = 51/352 (14%)
Query: 20 VQQRYTNWKKNTKLLYDYLNTNTSKWPSLSCQFFPDRTLTNDK----QRILLSSFTSQQL 75
+ + Y WKKNT LYD + T+ +WPSL+ Q+ PD K +++L ++T L
Sbjct: 17 INEEYKKWKKNTPFLYDLVLTHAVEWPSLTAQWLPDVIRPEGKDFSIHQLVLGTYT---L 73
Query: 76 PQDESIYIGSISTMNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNR 135
+ + I S+ N ++++ ++ EF S++ +E E++I + +G+ N+
Sbjct: 74 DEQNHLVITSVQLPNDDTQFDASHYNTEKGEFGGFYSVR---GKIEIEIKINH-EGEVNK 129
Query: 136 CRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNY 195
RYMPQN II T + + V +FD TKH +K + + + G Q E L+WN
Sbjct: 130 VRYMPQNSCIISTKTPSSDVLVFDYTKHPSKQDPSGECDPDLCLRG--HQKEGYGLSWNP 187
Query: 196 QLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASC 255
L G L + Q F + +++ E ILA+
Sbjct: 188 NLCGHLLSAQMTTPAACGTSVLFQR-REKCEF-----------------------ILATG 223
Query: 256 GESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFK 315
+ L D+R + K+ H D I +++ N+ IL + + +L +WD+
Sbjct: 224 SADKTVALRDLR-NLKLKLHSFELHKDKIFQFQWSPHNETILASSGTNHRLNVWDLSKIG 282
Query: 316 EPIKEWEHGDQDP------------ISAIQWNPQIPQILATADQQSGLVKIW 355
E + D P I WNP P ++ + + + ++++W
Sbjct: 283 EKQSPEDKEDGPPELLFIHGGHTAKIPDFSWNPNEPWVICSVPEDN-IMQVW 333
>Hs13631383 [B] KOG0264 Nucleosome remodeling factor subunit CAF1/NURF55/MSI1
Length = 262
Score = 105 bits (261), Expect = 2e-22
Identities = 77/268 (28%), Positives = 124/268 (45%), Gaps = 19/268 (7%)
Query: 40 TNTSKWPSLSCQFFPDRTLTNDKQRIL----LSSFTSQQLPQDESIYIGSISTMNHMKWS 95
T+ +WPSL+ Q+ P+ T K L L + TS + + + + N
Sbjct: 2 THALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSDE---QNHLVVARVHIPNDDAQF 58
Query: 96 SINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNRCRYMPQNPDIIGTASSNGSV 155
++ D D+ EF S+ +E E++I + +G+ NR RYMPQNP II T + + V
Sbjct: 59 DASHCDSDKGEFGGFGSVT---GKIECEIKINH-EGEVNRARYMPQNPHIIATKTPSSDV 114
Query: 156 YIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNYQLEGTLATCQSNGKVKVWDL 215
+FD TKH K + + R G Q E L+WN L G L + + V +WD+
Sbjct: 115 LVFDYTKHPAKPDPSGECNPDLRLRG--HQKEGYGLSWNSNLSGHLLSASDDHTVCLWDI 172
Query: 216 TKFDKSKQRMEIPERESVMDANG--VNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMD 273
K +I + +++ + V DV+W + H S+ S + + + D R +T
Sbjct: 173 NAGPKEG---KIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNTTSK 229
Query: 274 TLHRT-THTDGINAIEFNYKNDMILCTG 300
H HT +N + FN ++ IL TG
Sbjct: 230 PSHLVDAHTAEVNCLSFNPYSEFILATG 257
>CE27292 [R] KOG0302 Ribosome Assembly protein
Length = 453
Score = 87.4 bits (215), Expect = 4e-17
Identities = 97/392 (24%), Positives = 163/392 (40%), Gaps = 37/392 (9%)
Query: 35 YDYLNTNTSKWPSLSCQFFPDRTLTNDKQ---RILLSSFTSQQLPQDESIYIGSISTMNH 91
Y ++ S WP LS D N Q + S T P+D I + + +
Sbjct: 64 YKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVSGTQADKPRDNEIIVMGLKNLTT 123
Query: 92 MKWSSINNFD-MDEMEFKLDNSLKLNDKTLEEEVR-ITYPD-GDCNRCRYMPQNPDIIGT 148
M+ N D D E + ++ +K E ++ ++ P G NR R +
Sbjct: 124 MRKEKENKGDDSDTSEDESEDEDAEEEKKREPKMHAVSIPHYGGINRIRSDRLGDSTVCA 183
Query: 149 A-SSNGSVYIF---DRTKHGNKISTGRKFEIE------CRNNGDDEQDESLSLAWNYQLE 198
S G V ++ D + + +S K E++ NNG + E LAW+
Sbjct: 184 CWSDQGRVQVWNITDALNYTHGMSGESKTEVQKIDRPLFTNNGSGK--EGYGLAWSSLKT 241
Query: 199 GTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCGES 258
G LAT K+ +W + K + + V D++W T +LASC
Sbjct: 242 GDLATGDIIKKIYLWQM----KEGGQWAVGANPLTGHKKSVEDLAWSPTETGLLASCSAD 297
Query: 259 NVIGLIDIR---QDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIR--D 313
I L D R +D + T+ + H +N I +N ++I+ GD G+LKIW ++
Sbjct: 298 GSIKLWDTRSAPKDACVCTVQK-AHESDVNVISWNRHENLIVSGGD-DGELKIWSLKTIQ 355
Query: 314 FKEPIKEWEHGDQDPISAIQWNP-QIPQILATADQQSGLVKIWDASGEQE-DSNAEN--N 369
F +P+ +++ PI+++ W+P + +A+ + IWD + E + +N E
Sbjct: 356 FGQPVALFKY-HNSPITSVDWHPHETTTFMASGEDDQ--TTIWDIATEADGQTNIEGVPP 412
Query: 370 MLLFVHGGHMLGVNDISWSQHDPWTMCSVSND 401
L+FVH G V ++ W Q P + S D
Sbjct: 413 QLMFVHMGQN-EVKEVHWHQQIPGLAINTSID 443
>YMR131c [R] KOG0302 Ribosome Assembly protein
Length = 511
Score = 86.7 bits (213), Expect = 6e-17
Identities = 92/413 (22%), Positives = 171/413 (41%), Gaps = 60/413 (14%)
Query: 34 LYDYLNTNTSKWPSLSCQFFPDRTLTNDK----QRILLSSFTSQQLPQDESIYIGSISTM 89
+Y+ L+ WP L+ PD TL +++ Q ILL++ T ++ + + ++S +
Sbjct: 117 VYEMLHNVNMPWPCLTLDVIPD-TLGSERRNYPQSILLTTATQSSRKKENELMVLALSNL 175
Query: 90 NHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNRCRYMP---QNPDII 146
N + DE + + D D +E E I D NR + P N +++
Sbjct: 176 AKTLLKDDNEGEDDEEDDEDDV-----DPVIENE-NIPLRD-TTNRLKVSPFAISNQEVL 228
Query: 147 -GTASSNGSVYIFDRTKHGNKIST--------GRKFEIECRNNGDDEQDESLSLAWNYQL 197
T S NG VYI++ ST ++ +N+G+ E L W+ +
Sbjct: 229 TATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVE---GYGLDWSPLI 285
Query: 198 E-GTLATCQSNGKVKVWD--LTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILAS 254
+ G L + +G++ +++ KQ + +S+ D+ W +++ A+
Sbjct: 286 KTGALLSGDCSGQIYFTQRHTSRWVTDKQPFTVSNNKSI------EDIQWSRTESTVFAT 339
Query: 255 CGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDF 314
G I + D R + +N I ++ K +L +GD G +WD+R F
Sbjct: 340 AGCDGYIRIWDTRSKKHKPAISVKASNTDVNVISWSDKIGYLLASGDDNGTWGVWDLRQF 399
Query: 315 K-------EPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAE 367
+P+ +++ + I++I +NP I+A + + V +WD S E +D +
Sbjct: 400 TPSNADAVQPVAQYDF-HKGAITSIAFNPLDESIVAVGSEDN-TVTLWDLSVEADDEEIK 457
Query: 368 NN------------MLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWK 408
LLFVH V D+ W + P + S D +++WK
Sbjct: 458 QQAAETKELQEIPPQLLFVH--WQKEVKDVKWHKQIPGCLVSTGTD-GLNVWK 507
>7302218 [R] KOG0302 Ribosome Assembly protein
Length = 422
Score = 84.3 bits (207), Expect = 3e-16
Identities = 87/393 (22%), Positives = 158/393 (40%), Gaps = 37/393 (9%)
Query: 35 YDYLNTNTSKWPSLSCQFFPDRTLTNDKQRILLSSFTSQQLPQDESIYIGSISTMNHMKW 94
Y L+ ++ P LS PD L + +Q ++++ Q ++ ++ M
Sbjct: 29 YVMLHQASTGAPCLSFDVIPDE-LGSGRQSFPMTAYIVAGT-QASRAHVNNLIVMKMSNL 86
Query: 95 SSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYP----DGDCNRCRYMPQNPDIIGTAS 150
+ D DE E D+ + D+ ++ ++T G NR R + +
Sbjct: 87 HKTQDNDGDEDEELEDDQDDVTDREELKKPQMTCALVKHQGCVNRVRARRLGNSVYAASW 146
Query: 151 SN-GSVYIFDRTKHGNKISTGR------KFEIECRNNGDDEQDESLSLAWNYQLEGTLAT 203
S G V I+D T+ + + + E Q E ++ W+ +G LAT
Sbjct: 147 SELGRVNIWDLTQPLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLAT 206
Query: 204 CQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCGESNVIGL 263
+ VW + K + +R + V D+ W N S+LASC I +
Sbjct: 207 GDCRRDIHVWTPVEDGTWK----VDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRI 262
Query: 264 IDIRQDTKMDTL--HRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDF--KEPIK 319
D R + + H +N I +N +N+ + +G G L IWD+R F K+PI
Sbjct: 263 WDCRASPQKACMLTCEDAHQSDVNVISWN-RNEPFIASGGDDGYLHIWDLRQFQSKKPIA 321
Query: 320 EWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAEN----------- 368
++H D I+ ++W+P +LA+ + +WD + E++ A +
Sbjct: 322 TFKH-HTDHITTVEWSPAEATVLASGGDDD-QIALWDLAVEKDIDQAVDPAQNEDVLNKL 379
Query: 369 -NMLLFVHGGHMLGVNDISWSQHDPWTMCSVSN 400
LLF+H G + ++ W P + S ++
Sbjct: 380 PPQLLFIHQGQK-EIKELHWHPQLPGVLLSTAH 411
>At2g19540 [R] KOG0302 Ribosome Assembly protein
Length = 469
Score = 77.8 bits (190), Expect = 3e-14
Identities = 76/315 (24%), Positives = 125/315 (39%), Gaps = 43/315 (13%)
Query: 118 KTLEEEVRITYPDGDCNRCRYMPQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIEC 177
KT +VR G NR R MPQN I + + +G V ++D + H N ++ + E E
Sbjct: 147 KTPNIQVRRVAHHGCVNRIRAMPQNSHICVSWADSGHVQVWDMSSHLNALA---ESETEG 203
Query: 178 RN------------NGDDEQDESLSLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRM 225
++ N +DE ++ W+ G L + + +W+ + +
Sbjct: 204 KDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGDCKSMIHLWEPASGSWAVDPI 263
Query: 226 EIPERESVMDANGVNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGIN 285
+ V D+ W ++ ASC + + DIR K L H +N
Sbjct: 264 PFAGHTA-----SVEDLQWSPAEENVFASCSVDGSVAVWDIRLG-KSPALSFKAHNADVN 317
Query: 286 AIEFNYKNDMILCTGDSQGQLKIWDIRDFK---EPIKEWEHGDQDPISAIQWNPQIPQIL 342
I +N +L +G G I D+R K + +E+ + PI++I+W+ L
Sbjct: 318 VISWNRLASCMLASGSDDGTFSIRDLRLIKGGDAVVAHFEY-HKHPITSIEWSAHEASTL 376
Query: 343 ATADQQSGLVKIWDASGEQ-EDSNAENN---------------MLLFVHGGHMLGVNDIS 386
A + L IWD S E+ E+ AE N LLFVH G + ++
Sbjct: 377 AVTSGDNQLT-IWDLSLEKDEEEEAEFNAQTKELVNTPQDLPPQLLFVHQGQK-DLKELH 434
Query: 387 WSQHDPWTMCSVSND 401
W P + S + D
Sbjct: 435 WHNQIPGMIISTAGD 449
>SPBC1711.07 [R] KOG0302 Ribosome Assembly protein
Length = 480
Score = 77.0 bits (188), Expect = 5e-14
Identities = 92/399 (23%), Positives = 162/399 (40%), Gaps = 56/399 (14%)
Query: 34 LYDYLNTNTSKWPSLSCQFFPDRTLTNDK-----QRILLSSFTSQQLPQDESIYIGSIST 88
+Y+ L+ KWP LS D +L ++ Q L+ SQ L +++
Sbjct: 93 VYEMLHNIQVKWPFLSFDILQD-SLGEERRAWPHQMYLVGG--SQALDSNDN-------E 142
Query: 89 MNHMKWSSINNFDMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNRCRYM--PQNPD-- 144
+ MK S + DE + DNS D LE + T G CNR R P N
Sbjct: 143 LTVMKLSQLYKTQHDENDDASDNSDVEEDPILEHKSIST--KGACNRVRSARRPANSSKE 200
Query: 145 -IIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNG----DDEQDESLSLAWNYQLEG 199
++ + G V+I+D H + + N+ + + E +L W+ E
Sbjct: 201 SLLASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWS-PFEY 259
Query: 200 TLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCGESN 259
+L + + ++ LTK+ S + + V D+ W + ++ +SC
Sbjct: 260 SLLSGDNANEIF---LTKY--SNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSCDG 314
Query: 260 VIGLIDIRQDTKMDTLHRTTHTD-GINAIEFNYKNDMILCTGDSQGQLKIWDIRDFKE-- 316
+ D+R K L H +N + +N + +L TG G +WD+R K
Sbjct: 315 TFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLRSLKSSS 374
Query: 317 ----PIKEWEHGDQDPISAIQWNPQIPQILAT--ADQQSGLVKIWDAS----GEQEDSNA 366
P+ ++ + PI +I+W+P ++ AD Q + +WD S E++DS A
Sbjct: 375 SVATPVASFK-WHRAPIYSIEWHPNEDSVIGVVGADNQ---ISLWDLSVELDEEEQDSRA 430
Query: 367 ENNM------LLFVHGGHMLGVNDISWSQHDPWTMCSVS 399
+ L+F+H G + ++ W + P T+ S +
Sbjct: 431 AEGLQDVPPQLMFIHMGQQ-EIKEMHWHRQIPGTIVSTA 468
Score = 56.2 bits (134), Expect = 9e-08
Identities = 47/233 (20%), Positives = 91/233 (38%), Gaps = 14/233 (6%)
Query: 194 NYQLEGTLATCQSNGKVKVWD----LTKFDKSKQRMEIPERESVMDANGVND----VSWM 245
N E LA+ GKV +WD L D + E + N + W
Sbjct: 196 NSSKESLLASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWS 255
Query: 246 VNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQ 305
S+L+ + + + D+ +HT + ++++ + + G
Sbjct: 256 PFEYSLLSGDNANEIFLTKYSNGGWQTDSSPFLSHTAAVEDLQWSPSEKNVFSSCSCDGT 315
Query: 306 LKIWDIRDFKEP--IKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQED 363
+IWD+R+ ++ + H D ++ + WN ++P +LAT +G+ +WD +
Sbjct: 316 FRIWDVRNKQKTSALTVNAHPGVD-VNVLSWNTRVPNLLATG-ADNGVWSVWDLRSLKSS 373
Query: 364 SNAENNMLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANLVEQ 416
S+ + F H + I W ++ + V DN I +W + L E+
Sbjct: 374 SSVATPVASFKW--HRAPIYSIEWHPNEDSVIGVVGADNQISLWDLSVELDEE 424
>Hs13899346 [R] KOG0302 Ribosome Assembly protein
Length = 446
Score = 73.6 bits (179), Expect = 5e-13
Identities = 62/229 (27%), Positives = 102/229 (44%), Gaps = 26/229 (11%)
Query: 187 ESLSLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMV 246
E +L W+ ++ G L T + +W T + +R V V D+ W
Sbjct: 216 EGFALDWSPRVTGRLLTGDCQKNIHLWTPTDGGS----WHVDQRPFVGHTRSVEDLQWSP 271
Query: 247 NHTSILASCGESNVIGLIDIRQ-DTKMDTLHRTTHTDG-INAIEFNYKNDMILCTGDSQG 304
++ ASC I + DIR +K L T DG +N I ++ + +L GD G
Sbjct: 272 TENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNVISWSRREPFLLSGGDD-G 330
Query: 305 QLKIWDIRDFK--EPIKEWEHGDQDPISAIQWNPQIPQILAT--ADQQSGLVKIWDASGE 360
LKIWD+R FK P+ ++ P+++++W+PQ + A AD Q + WD + E
Sbjct: 331 ALKIWDLRQFKSGSPVATFKQ-HVAPVTSVEWHPQDSGVFAASGADHQ---ITQWDLAVE 386
Query: 361 QE----DSNAENNM------LLFVHGGHMLGVNDISWSQHDPWTMCSVS 399
++ D A+ + LLFVH G + ++ W P + S +
Sbjct: 387 RDPEAGDVEADPGLADLPQQLLFVHQGE-TELKELHWHPQCPGLLVSTA 434
>At1g76260 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 350
Score = 71.6 bits (174), Expect = 2e-12
Identities = 51/203 (25%), Positives = 96/203 (47%), Gaps = 19/203 (9%)
Query: 213 WDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCGESNVIGLIDIRQDTKM 272
W L D SK+ E+ +ES + ++ +W + + +A+ ES+ I D+R K
Sbjct: 148 WSL---DSSKKSAEVLSKESAGMRHSLSGGAWNPHDVNSVAATSESS-IQFWDLRTMKKN 203
Query: 273 DTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFKEPIKEWEHGDQDPISAI 332
+++ R + +++N K + IL + D + + +WD+R K P++E G A+
Sbjct: 204 NSIERAH----VRNVDYNLKREHILVSADDESGIHLWDLRKTKFPVQELP-GHTHWTWAV 258
Query: 333 QWNPQIPQILATADQQSGLVKIWDASGEQEDSNAEN---------NMLLFVHGGHMLGVN 383
+ NP+ +++ + S V +W AS E +E+ N LL + + V
Sbjct: 259 RCNPEYEELILSVGTDSA-VNLWFASASSEHKTSESPVEASRQRVNPLLNSYTDYEDSVY 317
Query: 384 DISWSQHDPWTMCSVSNDNSIHI 406
++WS +PW S+S D + I
Sbjct: 318 GLAWSSREPWIFASLSYDGRVVI 340
>At1g20540 [S] KOG1007 WD repeat protein TSSC1 WD repeat superfamily
Length = 379
Score = 70.1 bits (170), Expect = 6e-12
Identities = 49/202 (24%), Positives = 94/202 (46%), Gaps = 17/202 (8%)
Query: 215 LTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDT 274
L D SK+ E+ ++S + ++ +W + + +A+ GES+V D+R K+++
Sbjct: 175 LWSLDCSKKSAEVLSKDSAGMLHSLSGGAWDPHDVNAVAATGESSV-QFWDLRTMKKVNS 233
Query: 275 LHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFKEPIKEWEHGDQDPISAIQW 334
+ + +++N K + IL T + + + +WD+R K P++E G A++
Sbjct: 234 IEHAH----VRGVDYNPKREHILVTAEDESGIHVWDLRKAKVPVQELP-GHTHWTWAVRC 288
Query: 335 NPQIPQILATADQQSGLVKIWDASGEQEDSNAEN----------NMLLFVHGGHMLGVND 384
NP+ ++ +A S +V +W AS D N LL + + V
Sbjct: 289 NPEYDGLILSAGTDS-VVNLWYASATSSDDKTSESPVESTRQRVNPLLNSYTDYEDSVYG 347
Query: 385 ISWSQHDPWTMCSVSNDNSIHI 406
++WS +PW S+S D + I
Sbjct: 348 LAWSSREPWVFASLSYDGRVII 369
>7301821 [S] KOG0269 WD40 repeat-containing protein
Length = 776
Score = 69.3 bits (168), Expect = 1e-11
Identities = 50/219 (22%), Positives = 96/219 (43%), Gaps = 21/219 (9%)
Query: 191 LAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTS 250
+AW+ LAT +NG V VWDL+KF + KQ + E E + V++ + +
Sbjct: 71 VAWSTLDSNLLATAATNGVVSVWDLSKFGRQKQLLVYNEHERT-----AHTVTFHSSEPN 125
Query: 251 ILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWD 310
IL S + I DIR D ++T +++ + ++F+ I G +++WD
Sbjct: 126 ILISGSQDGTIKCFDIRSDKSINTYF--CNSESVRDVKFSPHTQNIFSAVSENGTVQLWD 183
Query: 311 IRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAENNM 370
+R + + + ++ P+ W+P LAT + +K+W+ G + + +
Sbjct: 184 MRKWDKCMVQFT-AHYGPVYTCDWHP-TRNWLATGSRDK-QIKVWNMDGRPGLEHTIHTI 240
Query: 371 LLFVHGGHMLGVNDISWSQHDPW--TMCSVSNDNSIHIW 407
+ V + W + C++ D S+H+W
Sbjct: 241 AV---------VGRVKWRPERTYHIASCALVVDYSVHVW 270
>Hs7705258 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1181
Score = 64.3 bits (155), Expect = 3e-10
Identities = 48/211 (22%), Positives = 92/211 (42%), Gaps = 13/211 (6%)
Query: 197 LEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCG 256
+ G L NG + ++D +K + + I + + DV+ + T+++AS
Sbjct: 85 VSGVLIAGGENGNIILYDPSKIIAGDKEVVIAQNDKHTGPVRALDVN--IFQTNLVASGA 142
Query: 257 ESNVIGLIDIRQ-DTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFK 315
+ I + D+ T M +T + I+ I +N + IL + G+ +WD+R+ +
Sbjct: 143 NESEIYIWDLNNFATPMTPGAKTQPPEDISCIAWNRQVQHILASASPSGRATVWDLRENE 202
Query: 316 EPIKEWEHGDQDPISAIQWNPQI--PQILATADQQSGLVKIWDASGEQEDSNAENNMLLF 373
IK +H ++ S + W+P + +LA+ D + ++++WD N
Sbjct: 203 PIIKVSDHSNRMHCSGLAWHPDVATQMVLASEDDRLPVIQMWDLRFASSPLRVLEN---- 258
Query: 374 VHGGHMLGVNDISWSQHDPWTMCSVSNDNSI 404
H G+ I+WS DP + S D I
Sbjct: 259 ----HARGILAIAWSMADPELLLSCGKDAKI 285
>Hs7662370 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1220
Score = 63.2 bits (152), Expect = 7e-10
Identities = 48/211 (22%), Positives = 91/211 (42%), Gaps = 13/211 (6%)
Query: 197 LEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCG 256
+ G L NG + ++D +K + + I + + DV+ + T+++AS
Sbjct: 85 VSGVLIAGGENGNIILYDPSKIIAGDKEVVIAQNDKHTGPVRALDVN--IFQTNLVASGA 142
Query: 257 ESNVIGLIDIRQ-DTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFK 315
+ I + D+ T M +T + I+ I +N + IL + G+ +WD+R +
Sbjct: 143 NESEIYIWDLNNFATPMTPGAKTQPPEDISCIAWNRQVQHILASASPSGRATVWDLRKNE 202
Query: 316 EPIKEWEHGDQDPISAIQWNPQI--PQILATADQQSGLVKIWDASGEQEDSNAENNMLLF 373
IK +H ++ S + W+P + +LA+ D + ++++WD N
Sbjct: 203 PIIKVSDHSNRMHCSGLAWHPDVATQMVLASEDDRLPVIQMWDLRFASSPLRVLEN---- 258
Query: 374 VHGGHMLGVNDISWSQHDPWTMCSVSNDNSI 404
H G+ I+WS DP + S D I
Sbjct: 259 ----HARGILAIAWSMADPELLLSCGKDAKI 285
>YDL195w [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1273
Score = 61.6 bits (148), Expect = 2e-09
Identities = 58/298 (19%), Positives = 112/298 (37%), Gaps = 74/298 (24%)
Query: 184 EQDESLSLAWNYQ---------LEGTL-ATCQSNGKVKVWDLTKFDKSKQRMEIPERESV 233
E + + AW++ + GT+ A ++ +++W L D K P
Sbjct: 6 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEK-----PIASLQ 60
Query: 234 MDANGVNDVSWMVNHTSILASCGESNVIGLIDIRQ-DTKMDTLHR-TTHTDGINAIEFNY 291
+D+ ND+ W N+ I+A ++ + L + + ++++ R + H+ + ++FN
Sbjct: 61 VDSK-FNDLDWSHNN-KIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNA 118
Query: 292 KNDMILCTGDSQGQLKIWDIRDFKEPIKEW-------EHGDQDPISAIQWNPQIPQILAT 344
K D +L +G + G++ IWD+ E + D + ++ WN + + A+
Sbjct: 119 KQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFAS 178
Query: 345 ADQQSGLVKIWDASGEQE------------------------------------------ 362
A S IWD ++E
Sbjct: 179 AG-SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 237
Query: 363 ---DSNAENNMLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIWKPAANLVEQL 417
D N L ++ GH G+ + W D + S DN++ +W P + EQL
Sbjct: 238 LIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES--AEQL 293
Score = 50.8 bits (120), Expect = 4e-06
Identities = 47/235 (20%), Positives = 98/235 (41%), Gaps = 22/235 (9%)
Query: 87 STMNHMKWSSINNF---DMDEMEFKLDNSLKLNDKTLEEEVRITYPDGDCNRCRYMPQNP 143
S N + WS N +D +L ++ + N+ + R + ++ +
Sbjct: 63 SKFNDLDWSHNNKIIAGALDNGSLELYSTNEANN-AINSMARFSNHSSSVKTVKFNAKQD 121
Query: 144 DIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNYQLEGTLAT 203
+++ + +NG ++I+D K S + DE +SLAWN L A+
Sbjct: 122 NVLASGGNNGEIFIWDMNKCTESPS---NYTPLTPGQSMSSVDEVISLAWNQSLAHVFAS 178
Query: 204 CQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVND----VSW-MVNHTSILASCGES 258
S+ +WDL K + E+ +G+ V W N T + + G
Sbjct: 179 AGSSNFASIWDL------KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD 232
Query: 259 NVIGLI--DIRQ-DTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWD 310
N ++ D+R +T + TL++ H GI ++++ ++++ +L + + +W+
Sbjct: 233 NDPSILIWDLRNANTPLQTLNQ-GHQKGILSLDWCHQDEHLLLSSGRDNTVLLWN 286
>CE28516 [S] KOG0269 WD40 repeat-containing protein
Length = 3901
Score = 60.5 bits (145), Expect = 5e-09
Identities = 50/222 (22%), Positives = 93/222 (41%), Gaps = 22/222 (9%)
Query: 190 SLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHT 249
++ WN + +AT SNG + W++++ +KS + ER + + W
Sbjct: 107 NVKWNQLYDQYIATTSSNGSIVCWNISRRNKSVFKSH--ERSATC-------LDWHATTP 157
Query: 250 SILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKN--DMILCTGDSQGQLK 307
IL S + D+R + + I + D TGD G L+
Sbjct: 158 YILVSGSRDCTVKSYDMRVKDNHQLTFSDRNCESIRDVAMCKAPGFDDYFFTGDDGGVLR 217
Query: 308 IWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAE 367
+WD+R + + + + + +S + NP ++AT + +VKIW+ +G E
Sbjct: 218 LWDLRQTRRWVFQ-KVAHRSFVSTLSLNPHNRTLIATGGGRDKMVKIWEWTG------PE 270
Query: 368 NNMLLFVHGGHMLGVNDISWSQHDPWTM--CSVSNDNSIHIW 407
N + V LG ++W P+ + C+ N+ S+H+W
Sbjct: 271 LNRISVVETTAPLG--RVAWRPDRPYHLATCASVNETSVHVW 310
>SPCC63.06 [R] KOG1188 WD40 repeat protein
Length = 331
Score = 57.8 bits (138), Expect = 3e-08
Identities = 38/129 (29%), Positives = 62/129 (47%), Gaps = 9/129 (6%)
Query: 254 SCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGD----SQGQLKIW 309
+CG I L DIR K T + I N KN TG S +++W
Sbjct: 72 TCGSEGEIHLWDIRSQAKSAVRSWTQQSTPFTCIALNKKNQF--ATGSELTRSLASVQLW 129
Query: 310 DIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAENN 369
D+R ++ I++W D I+ +Q++P+ ++L T GLV + D + E++ ++ E +
Sbjct: 130 DVRSEQKLIRQWNDAHNDDITHLQFHPKDNELLLTG-SVDGLVSLLDTTKEEDSTDPEED 188
Query: 370 MLLFV--HG 376
LL V HG
Sbjct: 189 PLLHVINHG 197
>7303990 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1240
Score = 57.8 bits (138), Expect = 3e-08
Identities = 51/211 (24%), Positives = 96/211 (45%), Gaps = 14/211 (6%)
Query: 208 GKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCGESNVIGLIDIR 267
G++ ++ K K+ + ++ A V+ + + ++LASC + I + D+
Sbjct: 90 GQINIYSADKLLAGKEEPLLKRQDKHTGA--VSGLDFNPFQNNLLASCASESEILIWDLN 147
Query: 268 Q-DTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFKEPIKEWEHGDQ 326
+T M +T + + + +N + IL + S + IWD+R ++ IK + +
Sbjct: 148 NPETSMSPGTKTQPLEDVKNVAWNRQVQHILASVFST-RCVIWDLRKSQQIIKLSDSQSR 206
Query: 327 DPISAIQWNPQIP-QI-LATADQQSGLVKIWDASGEQEDSNAENNMLLFVHGGHMLGVND 384
AI+W+P+ Q+ LA+ D Q+ +V++WD + A+ + H GV
Sbjct: 207 VRWHAIEWHPEAATQVWLASEDDQAPVVQLWDL--RYATAPAKTYQI------HERGVLG 258
Query: 385 ISWSQHDPWTMCSVSNDNSIHIWKPAANLVE 415
+SW D M S DN I+ W P + E
Sbjct: 259 MSWCLQDNDLMVSCGKDNRIYCWNPNTKIPE 289
>Hs14149987 [S] KOG0269 WD40 repeat-containing protein
Length = 790
Score = 57.4 bits (137), Expect = 4e-08
Identities = 47/220 (21%), Positives = 95/220 (42%), Gaps = 21/220 (9%)
Query: 191 LAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTS 250
+ W+ E LAT +NG V W+L + ++KQ E + VN V +
Sbjct: 80 VVWHQMDENLLATAATNGVVVTWNLGRPSRNKQDQLFTEHKRT-----VNKVCFHPTEAH 134
Query: 251 ILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWD 310
+L S + + D+R+ + T + ++ + ++F+ ++ + G +++WD
Sbjct: 135 VLLSGSQDGFMKCFDLRRKDSVSTF--SGQSESVRDVQFSIRDYFTFASTFENGNVQLWD 192
Query: 311 IRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAENNM 370
IR + + P+ W+P+ LAT + +VK+WD + + E +
Sbjct: 193 IRR-PDRCERMFTAHNGPVFCCDWHPEDRGWLATGGRDK-MVKVWDMTTHRA---KEMHC 247
Query: 371 LLFVHGGHMLGVNDISW---SQHDPWTMCSVSNDNSIHIW 407
+ + V + W +H T CS+ D++I++W
Sbjct: 248 VQTI-----ASVARVKWRPECRHHLAT-CSMMVDHNIYVW 281
>YLR196w [S] KOG0270 WD40 repeat-containing protein
Length = 576
Score = 53.5 bits (127), Expect = 6e-07
Identities = 46/173 (26%), Positives = 79/173 (45%), Gaps = 11/173 (6%)
Query: 186 DESLSLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWM 245
D LS+A N LA+ ++ VK+WDL + ++ I ++V + W
Sbjct: 287 DAVLSMAHNKYFRSVLASTSADHTVKLWDLNSGNAARSLASIHSNKNVSSSE------WH 340
Query: 246 VNHTSILASCGESNVIGLIDIR--QDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQ 303
+ + SIL + G + + L D+R +++M + I + F +N +ILC DS
Sbjct: 341 MLNGSILLTGGYDSRVALTDVRISDESQMSKYWSAMAGEEIETVTFASEN-IILCGTDS- 398
Query: 304 GQLKIWDIRDFKEPIKEWEHGDQDP-ISAIQWNPQIPQILATADQQSGLVKIW 355
G + +DIR+ + W D IS + N IP +++T VK+W
Sbjct: 399 GNVYSFDIRNNENRKPVWTLKAHDAGISTLCSNKFIPGMMSTGAMGEKTVKLW 451
>SPBC8D2.20c [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1224
Score = 53.5 bits (127), Expect = 6e-07
Identities = 49/237 (20%), Positives = 90/237 (37%), Gaps = 21/237 (8%)
Query: 183 DEQDESLSLAWNYQLE---GTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGV 239
D + LAW L+ G +A +G + WD KS + + + +
Sbjct: 61 DVKTRFYDLAWEKSLDKPMGVIAGSLEDGGIGFWDPAAILKSDEASASIATYKSENGSIL 120
Query: 240 NDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCT 299
+ + ++LAS + + DI+ + L + + ++ + +N K IL +
Sbjct: 121 GPLDFNRLQPNLLASGDNKGDVWVWDIKHPQQPFALPKQNRSSEVHVVSWNNKVSHILAS 180
Query: 300 GDSQGQLKIWDIRDFKEPIKEWEHGDQDPISA-------IQWNPQIPQILATA--DQQSG 350
G++ +WD++ K + + +SA I W+P LATA D ++
Sbjct: 181 GNATEYTTVWDVK-LKRQVLNLSYLGAAGVSAATGAVNSIAWHPNNATRLATAIDDNRNP 239
Query: 351 LVKIWDASGEQEDSNAENNMLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIW 407
++ WD N+L GH +SW DP + S D +W
Sbjct: 240 IILTWDL----RQPTVPQNILT----GHQKAALSLSWCPEDPTFLLSSGKDGRAMVW 288
>Hs14149696 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1179
Score = 53.1 bits (126), Expect = 7e-07
Identities = 46/210 (21%), Positives = 91/210 (42%), Gaps = 14/210 (6%)
Query: 199 GTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCGES 258
G + NG + ++++T S + I +++ A D++ + +LAS
Sbjct: 86 GVIVGGGDNGMLILYNVTHILSSGKEPVIAQKQKHTGAVRALDLNPFQGN--LLASGASD 143
Query: 259 NVIGLIDIRQDTKMDTLHRTTHT--DGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFKE 316
+ I + D+ TL + + I A+ +N + IL + G+ +WD+R +
Sbjct: 144 SEIFIWDLNNLNVPMTLGSKSQQPPEDIKALSWNRQAQHILSSAHPSGKAVVWDLRKNEP 203
Query: 317 PIKEWEHGDQDPISAIQWNPQIPQ--ILATADQQSGLVKIWDASGEQEDSNAENNMLLFV 374
IK +H ++ S + W+P I +L + D + ++++WD L V
Sbjct: 204 IIKVSDHSNRMHCSGLAWHPDIATQLVLCSEDDRLPVIQLWDLRFASSP--------LKV 255
Query: 375 HGGHMLGVNDISWSQHDPWTMCSVSNDNSI 404
H G+ +SWSQ D + + + D+ I
Sbjct: 256 LESHSRGILSVSWSQADAELLLTSAKDSQI 285
>ECU05g1010 [R] KOG0302 Ribosome Assembly protein
Length = 338
Score = 53.1 bits (126), Expect = 7e-07
Identities = 44/138 (31%), Positives = 68/138 (48%), Gaps = 15/138 (10%)
Query: 240 NDVSWMVNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCT 299
+ V + +H ++ S + IG+ DIR + T+ R INA++FN D L
Sbjct: 181 DSVEGLCHHDGMIFSGSCDHSIGITDIRSGS---TVFRKRFGSDINAVDFN--GDYTLAF 235
Query: 300 GDSQGQLKIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASG 359
GD +G +++ DIR+ I+E + PIS ++W ILA+ + V IWD S
Sbjct: 236 GDDEGTIRLMDIRN--HSIEEVTR-HKTPISCLRWRDS--DILASGSDEQ--VCIWDMS- 287
Query: 360 EQEDSNAENNMLLFVHGG 377
D + + LLFVH G
Sbjct: 288 --LDPSEDLGYLLFVHQG 303
>At5g54520 [S] KOG0282 mRNA splicing factor
Length = 404
Score = 52.4 bits (124), Expect = 1e-06
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 17/181 (9%)
Query: 190 SLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHT 249
++ W+ LA+ +G V VW++ DK K R + V DV W
Sbjct: 112 AIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAPV------KDVKWSKQGL 165
Query: 250 SILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIW 309
S+L SCG L D+ + + + + + ++F+ N + +G S+G L++W
Sbjct: 166 SLL-SCGYDCTSRLFDVERGVETQSFKED---EVVGVVKFHPDNCNVFLSGGSKGSLRLW 221
Query: 310 DIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQ-----QSGLVKIWDASGEQEDS 364
DIR K + E+ D PI +++ Q ++++D V +WD S E S
Sbjct: 222 DIRANKF-VHEYVR-DLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDISREVPLS 279
Query: 365 N 365
N
Sbjct: 280 N 280
>At3g56990 [R] KOG2321 WD40 repeat protein
Length = 711
Score = 51.2 bits (121), Expect = 3e-06
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 18/154 (11%)
Query: 247 NHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDG----INAIEFNYKNDMILCTGDS 302
N ++A GE + D+R + ++ TH + AIEF+ + + G S
Sbjct: 192 NLHGLVACGGEDGAVEFFDMRMKSSAARINAVTHGGDAAAEVTAIEFDDSEGLQVAVGSS 251
Query: 303 QGQLKIWDIRDFKEPIKEWEHGDQDPISAIQW----NPQIPQILATADQQSGLVKIWDAS 358
G++ I+D+R PI+ +H + PI I+W N Q P+++ T +V+IWD +
Sbjct: 252 AGKVFIYDLRT-STPIRVKDHMYESPILNIKWQRTLNTQQPKLITT---NKHIVRIWDPN 307
Query: 359 GEQEDSNAE------NNMLLFVHGGHMLGVNDIS 386
+ ++ E N++ +F G ML D S
Sbjct: 308 TGEGMTSIEPTQGGINDICVFRGSGLMLLALDSS 341
>7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 439
Score = 50.8 bits (120), Expect = 4e-06
Identities = 53/220 (24%), Positives = 88/220 (39%), Gaps = 30/220 (13%)
Query: 190 SLAWNYQLEGTLATCQSNGKVKVWD-LT-KFDKSKQRMEIPERESVMDANGVNDVSWMVN 247
+LAW + L T S+G+ +W+ LT F+ Q +I R V N SWMV
Sbjct: 151 TLAWTPEGR-RLVTGASSGEFTLWNGLTFNFETILQAHDISVRTMVWSHND----SWMVT 205
Query: 248 HTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLK 307
G+ G + Q + H + I I F+ D +G G L+
Sbjct: 206 --------GDHG--GYVKYWQSNMNNVKMYQAHKEAIRGISFS-PTDSKFVSGSDDGTLR 254
Query: 308 IWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAE 367
IWD +E HG + + W+PQ I++ + +KIWD +
Sbjct: 255 IWDFMRCQEERVLRGHGAD--VKCVHWHPQKGMIVSGSKDNQQPIKIWD---------PK 303
Query: 368 NNMLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIW 407
+ + L H V D+ W+ + W + + S D+ + ++
Sbjct: 304 SGIALATLHAHKSTVMDLKWNDNGNW-LVTASRDHLLKLF 342
>Hs4505731 [U] KOG0277 Peroxisomal targeting signal type 2 receptor
Length = 323
Score = 50.4 bits (119), Expect = 5e-06
Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 282 DGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQI 341
DG+ + ++ N+ +L T G L++WD P++ ++ Q+ + ++ W+ +
Sbjct: 68 DGLFDVTWSENNEHVLITCSGDGSLQLWDTAKAAGPLQVYKEHAQE-VYSVDWSQTRGEQ 126
Query: 342 LATADQQSGLVKIWDASGEQEDSNAENNMLLFVHGGHMLGVNDISWSQHDPWTMCSVSND 401
L + VK+WD + + L GH + WS H P S S D
Sbjct: 127 LVVSGSWDQTVKLWDPTVGKS---------LCTFRGHESIIYSTIWSPHIPGCFASASGD 177
Query: 402 NSIHIW 407
++ IW
Sbjct: 178 QTLRIW 183
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 50.1 bits (118), Expect = 6e-06
Identities = 39/158 (24%), Positives = 70/158 (43%), Gaps = 17/158 (10%)
Query: 250 SILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIW 309
S+L S + + D ++ L HT +N+ K+ ++CTG G +K+W
Sbjct: 122 SMLFSASTDKTVAVWDSETGERVKRLKG--HTSFVNSCYPARKSPQLVCTGSDDGTVKLW 179
Query: 310 DIRDFKEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAENN 369
DIR K I+ +++ Q + A+ +N QI++ +K+WD N
Sbjct: 180 DIRK-KAAIQTFQNTYQ--VLAVTFNDTSDQIISGGIDND--IKVWD---------LRQN 225
Query: 370 MLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIW 407
L + GH V +S S + + S + DN++ +W
Sbjct: 226 KLTYTMRGHADSVTGLSLSSEGSY-LLSNAMDNTVRVW 262
>Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 1336
Score = 50.1 bits (118), Expect = 6e-06
Identities = 47/215 (21%), Positives = 88/215 (40%), Gaps = 31/215 (14%)
Query: 198 EGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANG--VNDVSWMVNHTSILASC 255
+ ATC +G V++WD + E ++ +G V V W +++
Sbjct: 214 DNKFATCSDDGTVRIWDFLRC----------HEERILRGHGADVKCVDWHPTKGLVVSGS 263
Query: 256 GES-NVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDF 314
+S I D + + TLH H + + ++ N + +L T K++DIR+
Sbjct: 264 KDSQQPIKFWDPKTGQSLATLH--AHKNTVMEVKLNLNGNWLL-TASRDHLCKLFDIRNL 320
Query: 315 KEPIKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQEDSNAE--NNMLL 372
KE ++ + G + +A+ W+P + A+ L+ W E+E E + ++
Sbjct: 321 KEELQVF-RGHKKEATAVAWHPVHEGLFASGGSDGSLL-FWHVGVEKEVGGMEMAHEGMI 378
Query: 373 FVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIW 407
+ H LG +CS SND++ W
Sbjct: 379 WSLAWHPLG-----------HILCSGSNDHTSKFW 402
>CE16320 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1083
Score = 50.1 bits (118), Expect = 6e-06
Identities = 48/224 (21%), Positives = 88/224 (38%), Gaps = 22/224 (9%)
Query: 190 SLAWNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERES----VMDANGVNDVSWM 245
SL + G +A +G V +D KF K++ + R V+ + D WM
Sbjct: 77 SLCSDAHPNGIIAGGTEDGTVVFFDADKFIKNQSLEVLLSRRDHHGHVLTIDVSRDGRWM 136
Query: 246 VNHTSILASCGESNVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQ 305
AS G S I L D + D + + +N KN+ + + S+ +
Sbjct: 137 -------ASGGGSGQILLWDCANLKTPFSPGSPNFPDQVKLLRWNLKNESVFASISSR-R 188
Query: 306 LKIWDIRDFKEPIKEWEHGDQDPISAIQWNPQIPQ--ILATADQQSGLVKIWDASGEQED 363
+ WD+R P+ E+ S++ WNP I+++ Q + +++ WD+
Sbjct: 189 VSFWDLRRNGSPVLEFAEIPGCDWSSLSWNPSDASQLIVSSQSQHASVIQKWDSRFTSTP 248
Query: 364 SNAENNMLLFVHGGHMLGVNDISWSQHDPWTMCSVSNDNSIHIW 407
+ H +G+ + W++ D + S D + IW
Sbjct: 249 VKEYRH--------HNMGITSVDWNKADDRLVISSGCDGQVVIW 284
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 50.1 bits (118), Expect = 6e-06
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 21/222 (9%)
Query: 140 PQNPDIIGTASSNGSVYIFDRTKHGNKISTGRKFEIECRNNGDDEQDESLSLAWNYQLEG 199
P NP GT + S + G S +++ C G +S+S A
Sbjct: 46 PSNPT--GTPAPGASAQTPNPNAAGASASGSANYKLMCTLEG---HTKSISSAKFSPCGK 100
Query: 200 TLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSILASCGESN 259
L T ++ VK+W++ I ER GVND++W + ++ S +
Sbjct: 101 YLGTSSADKTVKIWNMDHM--------ICERTLTGHKLGVNDIAWSSDSRCVV-SASDDK 151
Query: 260 VIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFKEPIK 319
+ + +I TL H + + FN ++ +++ +G ++IWD++ IK
Sbjct: 152 TLKIFEIVTSRMTKTLKG--HNNYVFCCNFNPQSSLVV-SGSFDESVRIWDVKTGM-CIK 207
Query: 320 EWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWDASGEQ 361
DP+SA+ +N L + GLV+IWD + Q
Sbjct: 208 TLP-AHSDPVSAVSFNRD--GSLIASGSYDGLVRIWDTANGQ 246
>At3g63460 [U] KOG0307 Vesicle coat complex COPII subunit SEC31
Length = 1097
Score = 49.7 bits (117), Expect = 8e-06
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 259 NVIGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDIRDFKEP- 317
N + LI + H + H + +EFN + +L +G G++ IWD+ EP
Sbjct: 100 NPLSLIGSQPSENALVGHLSVHKGPVRGLEFNAISSNLLASGADDGEICIWDLLKPSEPS 159
Query: 318 ----IKEWEHGDQDPISAIQWNPQIPQILATADQQSGLVKIWD 356
+K Q IS I WN ++ QILA+ +G IWD
Sbjct: 160 HFPLLKGSGSATQGEISFISWNRKVQQILAST-SYNGTTVIWD 201
>At2g20330 [S] KOG0772 Uncharacterized conserved protein contains WD40 repeat
Length = 648
Score = 49.7 bits (117), Expect = 8e-06
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 193 WNYQLEGTLATCQSNGKVKVWDLTKFDKSKQRMEIPERESVMDANGVNDVSWMVNHTSIL 252
W+ + + T+ T +G +++WD+ F Q I + + V +W + I
Sbjct: 286 WHPRTKETVLTSSEDGSLRIWDVNNF--LSQTQVIKPKLARPGRVPVTTCAWDRDGKRIA 343
Query: 253 ASCGESNV-IGLIDIRQDTKMDTLHRTTHTDGINAIEFNYKNDMILCTGDSQGQLKIWDI 311
G+ ++ I + ++ D HTD I +++F+ + IL + G LK+WD+
Sbjct: 344 GGVGDGSIQIWSLKPGWGSRPDIYVGKAHTDDITSVKFS-SDGRILLSRSFDGSLKVWDL 402
Query: 312 RDFKEPIKEWE 322
R KE +K +E
Sbjct: 403 RQMKEALKVFE 413
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.314 0.131 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,493,754
Number of Sequences: 60738
Number of extensions: 1291936
Number of successful extensions: 3961
Number of sequences better than 1.0e-05: 50
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 38
Number of HSP's that attempted gapping in prelim test: 3623
Number of HSP's gapped (non-prelim): 118
length of query: 417
length of database: 30,389,216
effective HSP length: 109
effective length of query: 308
effective length of database: 23,768,774
effective search space: 7320782392
effective search space used: 7320782392
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)