ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV6132 good E KOG2367 Amino acid transport and metabolism Alpha-isopropylmalate synthase/homocitrate synthase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV6132 2106582 2105404 -393
(393 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YDL131w [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate s... 692 0.0
YDL182w [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate s... 685 0.0
SPBC1105.02c [E] KOG2367 Alpha-isopropylmalate synthase/homocitr... 606 e-173
At5g23010 [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate... 156 6e-38
At5g23020 [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate... 152 6e-37
At1g74040 [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate... 142 9e-34
At1g18500 [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate... 130 4e-30
SPBC17G9.11c [C] KOG0369 Pyruvate carboxylase 53 7e-07
At2g26800 [CE] KOG2368 Hydroxymethylglutaryl-CoA lyase 52 2e-06
>YDL131w [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate synthase
Length = 440
Score = 692 bits (1785), Expect = 0.0
Identities = 339/389 (87%), Positives = 369/389 (94%)
Query: 5 SNPYAPSPNDLLSNVCNFQLIESTLREGEQFASAFFSTEKKIEIAKALDDFGVDYIELTS 64
SNPY P+P D LSNV NFQLI+STLREGEQFA+AFF TEKKIEIA+ALDDFGVDYIELTS
Sbjct: 20 SNPYGPNPADYLSNVKNFQLIDSTLREGEQFANAFFDTEKKIEIARALDDFGVDYIELTS 79
Query: 65 PVASEQSRSDCEAICKLGLKAKILTHIRCHMDDARVAVETXXXXXXXXIGTSKFLREYSH 124
PVASEQSR DCEAICKLGLKAKILTHIRCHMDDARVAVET IGTSKFLR+YSH
Sbjct: 80 PVASEQSRKDCEAICKLGLKAKILTHIRCHMDDARVAVETGVDGVDVVIGTSKFLRQYSH 139
Query: 125 GKDMNYIAKSAIEVIEFVKSKGLEIRFSSEDSFRSDIVDLLNIYKTVDKIGVNRVGIADT 184
GKDMNYIAKSA+EVIEFVKSKG+EIRFSSEDSFRSD+VDLLNIYKTVDKIGVNRVGIADT
Sbjct: 140 GKDMNYIAKSAVEVIEFVKSKGIEIRFSSEDSFRSDLVDLLNIYKTVDKIGVNRVGIADT 199
Query: 185 VGCANPRQVYELVRTLKSVVSCDIECHFHDDTGCAIGNSYSALEAGARLIDVSVLGIGER 244
VGCANPRQVYEL+RTLKSVVSCDIECHFH+DTGCAI N+Y+ALE GARLIDVSVLGIGER
Sbjct: 200 VGCANPRQVYELIRTLKSVVSCDIECHFHNDTGCAIANAYTALEGGARLIDVSVLGIGER 259
Query: 245 NGITSLGGLMARMIVSAPEYVKSKYKLHKLRDLENLVADAVSVNVPFNNPITGFCAFTHK 304
NGIT LGGLMARMIV+AP+YV+SKYKLHK+RD+ENLVADAV VN+PFNNPITGFCAFTHK
Sbjct: 260 NGITPLGGLMARMIVAAPDYVRSKYKLHKIRDIENLVADAVEVNIPFNNPITGFCAFTHK 319
Query: 305 AGIHAKAILANPSTYEILNPEDFGMKRYIHFANRLTGWNAIKSRVEQLNLHLSDDQIKEV 364
AGIHAKAILANPSTYEIL+P DFGMKRYIHFANRLTGWNAIKSRV+QLNL+L+DDQIKEV
Sbjct: 320 AGIHAKAILANPSTYEILDPHDFGMKRYIHFANRLTGWNAIKSRVDQLNLNLTDDQIKEV 379
Query: 365 TSKIKQIGDVRQLSIEDVDTIIKDYHSEL 393
T+KIK++GDVR L+I+DVD+IIKD+H+EL
Sbjct: 380 TAKIKKLGDVRPLNIDDVDSIIKDFHAEL 408
>YDL182w [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate synthase
Length = 428
Score = 685 bits (1768), Expect = 0.0
Identities = 335/388 (86%), Positives = 367/388 (94%)
Query: 6 NPYAPSPNDLLSNVCNFQLIESTLREGEQFASAFFSTEKKIEIAKALDDFGVDYIELTSP 65
NPYA P D LSNV NFQLI+STLREGEQFA+AFF TEKKIEIA+ALDDFGVDYIELTSP
Sbjct: 7 NPYAAKPGDYLSNVNNFQLIDSTLREGEQFANAFFDTEKKIEIARALDDFGVDYIELTSP 66
Query: 66 VASEQSRSDCEAICKLGLKAKILTHIRCHMDDARVAVETXXXXXXXXIGTSKFLREYSHG 125
VASEQSR DCEAICKLGLKAKILTHIRCHMDDA+VAVET IGTSKFLR+YSHG
Sbjct: 67 VASEQSRKDCEAICKLGLKAKILTHIRCHMDDAKVAVETGVDGVDVVIGTSKFLRQYSHG 126
Query: 126 KDMNYIAKSAIEVIEFVKSKGLEIRFSSEDSFRSDIVDLLNIYKTVDKIGVNRVGIADTV 185
KDMNYIAKSA+EVIEFVKSKG+EIRFSSEDSFRSD+VDLLNIYKTVDKIGVNRVGIADTV
Sbjct: 127 KDMNYIAKSAVEVIEFVKSKGIEIRFSSEDSFRSDLVDLLNIYKTVDKIGVNRVGIADTV 186
Query: 186 GCANPRQVYELVRTLKSVVSCDIECHFHDDTGCAIGNSYSALEAGARLIDVSVLGIGERN 245
GCANPRQVYEL+RTLKSVVSCDIECHFH+DTGCAI N+Y+ALE GARLIDVSVLGIGERN
Sbjct: 187 GCANPRQVYELIRTLKSVVSCDIECHFHNDTGCAIANAYTALEGGARLIDVSVLGIGERN 246
Query: 246 GITSLGGLMARMIVSAPEYVKSKYKLHKLRDLENLVADAVSVNVPFNNPITGFCAFTHKA 305
GIT LGGLMARMIV+AP+YVKSKYKLHK+RD+ENLVADAV VN+PFNNPITGFCAFTHKA
Sbjct: 247 GITPLGGLMARMIVAAPDYVKSKYKLHKIRDIENLVADAVEVNIPFNNPITGFCAFTHKA 306
Query: 306 GIHAKAILANPSTYEILNPEDFGMKRYIHFANRLTGWNAIKSRVEQLNLHLSDDQIKEVT 365
GIHAKAILANPSTYEIL+P DFGMKRYIHFANRLTGWNAIK+RV+QLNL+L+DDQIKEVT
Sbjct: 307 GIHAKAILANPSTYEILDPHDFGMKRYIHFANRLTGWNAIKARVDQLNLNLTDDQIKEVT 366
Query: 366 SKIKQIGDVRQLSIEDVDTIIKDYHSEL 393
+KIK++GDVR L+I+DVD+IIK++H+E+
Sbjct: 367 AKIKKLGDVRSLNIDDVDSIIKNFHAEV 394
>SPBC1105.02c [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate synthase
Length = 418
Score = 606 bits (1562), Expect = e-173
Identities = 294/391 (75%), Positives = 338/391 (86%)
Query: 3 VNSNPYAPSPNDLLSNVCNFQLIESTLREGEQFASAFFSTEKKIEIAKALDDFGVDYIEL 62
+N NPY P+P+D LS V NF +IESTLREGEQFA+AFF TEKKI+IAKALD+FGVDYIEL
Sbjct: 16 MNGNPYGPNPSDFLSRVNNFSIIESTLREGEQFANAFFDTEKKIQIAKALDNFGVDYIEL 75
Query: 63 TSPVASEQSRSDCEAICKLGLKAKILTHIRCHMDDARVAVETXXXXXXXXIGTSKFLREY 122
TSPVASEQSR DCEAICKLGLK KILTHIRCHMDDARVAVET IGTS++LR+Y
Sbjct: 76 TSPVASEQSRQDCEAICKLGLKCKILTHIRCHMDDARVAVETGVDGVDVVIGTSQYLRKY 135
Query: 123 SHGKDMNYIAKSAIEVIEFVKSKGLEIRFSSEDSFRSDIVDLLNIYKTVDKIGVNRVGIA 182
SHGKDM YI SA EVI FVKSKG+E+RFSSEDSFRSD+VDLL++YK VDKIGVNRVGIA
Sbjct: 136 SHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIGVNRVGIA 195
Query: 183 DTVGCANPRQVYELVRTLKSVVSCDIECHFHDDTGCAIGNSYSALEAGARLIDVSVLGIG 242
DTVGCA PRQVY+L+RTL+ VVSCDIECHFH+DTG AI N+Y ALEAGA ID S+LGIG
Sbjct: 196 DTVGCATPRQVYDLIRTLRGVVSCDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIG 255
Query: 243 ERNGITSLGGLMARMIVSAPEYVKSKYKLHKLRDLENLVADAVSVNVPFNNPITGFCAFT 302
ERNGIT LG L+ARM V+ EY+ KYKL++LR+LENLVADAV V +PFNN ITG CAFT
Sbjct: 256 ERNGITPLGALLARMYVTDREYITHKYKLNQLRELENLVADAVEVQIPFNNYITGMCAFT 315
Query: 303 HKAGIHAKAILANPSTYEILNPEDFGMKRYIHFANRLTGWNAIKSRVEQLNLHLSDDQIK 362
HKAGIHAKAILANPSTYEIL PEDFGM RY+H +RLTGWNAIKSR EQLNLHL+D Q K
Sbjct: 316 HKAGIHAKAILANPSTYEILKPEDFGMSRYVHVGSRLTGWNAIKSRAEQLNLHLTDAQAK 375
Query: 363 EVTSKIKQIGDVRQLSIEDVDTIIKDYHSEL 393
E+T +IK++ DVR L+++DVD ++++YH++L
Sbjct: 376 ELTVRIKKLADVRTLAMDDVDRVLREYHADL 406
>At5g23010 [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate synthase
Length = 506
Score = 156 bits (394), Expect = 6e-38
Identities = 115/373 (30%), Positives = 174/373 (45%), Gaps = 24/373 (6%)
Query: 23 QLIESTLREGEQFASAFFSTEKKIEIAKALDDFGVDYIELTSPVASEQSRSDCEAICKL- 81
++ ++TLR+GEQ + +K+EIA+ L VD +E+ P +SE+ + I K
Sbjct: 86 RVFDTTLRDGEQSPGGSLTPPQKLEIARQLAKLRVDIMEVGFPGSSEEELETIKTIAKTV 145
Query: 82 --------GLKAKILTHIRCHMDDARVAVETXXXXXXXXI----GTSKFLREYSHGKDMN 129
G I RC D E I TS +Y K
Sbjct: 146 GNEVDEETGYVPVICAIARCKHRDIEATWEALKYAKRPRILVFTSTSDIHMKYKLKKTQE 205
Query: 130 YIAKSAIEVIEFVKSKGL-EIRFSSEDSFRSDIVDLLNIYKTVDKIGVNRVGIADTVGCA 188
+ + A+ I F KS G +I+F ED RSD L I K GV V I DTVG
Sbjct: 206 EVIEMAVSSIRFAKSLGFNDIQFGCEDGGRSDKDFLCKILGEAIKAGVTVVTIGDTVGIN 265
Query: 189 NPRQVYELVRTLKS----VVSCDIECHFHDDTGCAIGNSYSALEAGARLIDVSVLGIGER 244
P + ELV LK+ + + H H+D G A NS + + AGAR ++V++ GIGER
Sbjct: 266 MPHEYGELVTYLKANTPGIDDVVVAVHCHNDLGLATANSIAGIRAGARQVEVTINGIGER 325
Query: 245 NGITSLGGLMARMIVSAPEYVKSKYKLHKLRDL---ENLVADAVSVNVPFNNPITGFCAF 301
+G SL ++ + + Y R + +V + + V + PI G F
Sbjct: 326 SGNASLEEVVMALKCRGAYVINGVYTKIDTRQIMATSKMVQEYTGLYVQAHKPIVGANCF 385
Query: 302 THKAGIHAKAILANPSTYEILNPEDFGMKRYIH---FANRLTGWNAIKSRVEQLNLHLSD 358
H++GIH IL N STYEIL+PED G+ + + +L+G +A+K R+++L L D
Sbjct: 386 VHESGIHQDGILKNRSTYEILSPEDIGIVKSQNSGLVLGKLSGRHAVKDRLKELGYELDD 445
Query: 359 DQIKEVTSKIKQI 371
+++ V S + +
Sbjct: 446 EKLNAVFSLFRDL 458
>At5g23020 [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate synthase
Length = 503
Score = 152 bits (385), Expect = 6e-37
Identities = 111/389 (28%), Positives = 193/389 (49%), Gaps = 25/389 (6%)
Query: 23 QLIESTLREGEQFASAFFSTEKKIEIAKALDDFGVDYIELTSPVASEQSRSDCEAICKL- 81
+++++TLR+GEQ A + +K+EIA+ L VD +E+ PV+SE+ + I K
Sbjct: 86 RVLDTTLRDGEQSPGAALTPPQKLEIARQLAKLRVDIMEVGFPVSSEEEFEAIKTIAKTV 145
Query: 82 --------GLKAKILTHIRCHMDDARVAVETXXXXXXXXI----GTSKFLREYSHGKDMN 129
G I RC D E + TS+ +Y K
Sbjct: 146 GNEVDEETGYVPVICGIARCKKRDIEATWEALKYAKRPRVMLFTSTSEIHMKYKLKKTKE 205
Query: 130 YIAKSAIEVIEFVKSKGL-EIRFSSEDSFRSDIVDLLNIYKTVDKIGVNRVGIADTVGCA 188
+ + A+ +++ KS G +I+F ED R++ + I K G VG ADTVG
Sbjct: 206 EVIEMAVNSVKYAKSLGFKDIQFGCEDGGRTEKDFICKILGESIKAGATTVGFADTVGIN 265
Query: 189 NPRQVYELVR-TLKSVVSCD---IECHFHDDTGCAIGNSYSALEAGARLIDVSVLGIGER 244
P++ ELV +++ D H H+D G A N+ S + AGAR ++V++ GIGER
Sbjct: 266 MPQEFGELVAYVIENTPGADDIVFAIHCHNDLGVATANTISGICAGARQVEVTINGIGER 325
Query: 245 NGITSLGGLMARMIV---SAPEYVKSKYKLHKLRDLENLVADAVSVNVPFNNPITGFCAF 301
+G L ++ + S + V +K ++ +V + + V + PI G F
Sbjct: 326 SGNAPLEEVVMALKCRGESLMDGVYTKIDSRQIMATSKMVQEHTGMYVQPHKPIVGDNCF 385
Query: 302 THKAGIHAKAILANPSTYEILNPEDFGMKRYIH---FANRLTGWNAIKSRVEQLNLHLSD 358
H++GIH IL N STYEIL+PED G+ + + +L+G +A+K R+++L +SD
Sbjct: 386 VHESGIHQDGILKNRSTYEILSPEDVGIVKSENSGIVLGKLSGRHAVKDRLKELGYEISD 445
Query: 359 DQIKEVTSKIKQI-GDVRQLSIEDVDTII 386
++ ++ S+ +++ D ++++ D+ ++
Sbjct: 446 EKFNDIFSRYRELTKDKKRITDADLKALV 474
>At1g74040 [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate synthase
Length = 631
Score = 142 bits (358), Expect = 9e-34
Identities = 111/407 (27%), Positives = 190/407 (46%), Gaps = 29/407 (7%)
Query: 7 PYAPS--PNDLLSNVCN---FQLIESTLREGEQFASAFFSTEKKIEIAKALDDFGVDYIE 61
P+AP PN + + + + ++ ++TLR+GEQ A ++++K++IA+ L GVD IE
Sbjct: 67 PHAPRRRPNYIPNRISDPNYVRIFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIE 126
Query: 62 LTSPVASEQSRSDCEAICKL--------GLKAKILTHIRCHMDDARVAVETXXXXXX--- 110
P AS+ + I + G I RC+ D A E
Sbjct: 127 AGFPAASKDDFEAVKTIAETVGNTVDENGYVPVICGLSRCNKKDIETAWEAVKYAKRPRI 186
Query: 111 -XXIGTSKFLREYSHGKDMNYIAKSAIEVIEFVKSKGLE-IRFSSEDSFRSDIVDLLNIY 168
I TS +Y K + + A ++ F +S G E + FS ED+ RS+ L I
Sbjct: 187 HTFIATSDIHLKYKLKKSKEEVIEIARNMVRFARSLGCEDVEFSPEDAGRSEREYLYEIL 246
Query: 169 KTVDKIGVNRVGIADTVGCANPRQVYELVRTLKS----VVSCDIECHFHDDTGCAIGNSY 224
V K G + I DTVG P + +L+ +K+ + + I H +D G + N+
Sbjct: 247 GEVIKAGATTLNIPDTVGITLPSEFGQLIADIKANTPGIQNVIISTHCQNDLGLSTANTL 306
Query: 225 SALEAGARLIDVSVLGIGERNGITSLGGLMARMIVSAPEYVKSKYKLHKLRDL---ENLV 281
S +GAR ++V++ GIGER G SL ++ + + + R + +V
Sbjct: 307 SGAHSGARQVEVTINGIGERAGNASLEEVVMAIKCRGDHVLGGLFTGIDTRHIVMTSKMV 366
Query: 282 ADAVSVNVPFNNPITGFCAFTHKAGIHAKAILANPSTYEILNPEDFGMKRYIH---FANR 338
+ + + I G AF H++GIH +L + TYEI++PE+ G++R +
Sbjct: 367 EEYTGMQTQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIMSPEEIGLERSNDAGIVLGK 426
Query: 339 LTGWNAIKSRVEQLNLHLSDDQIKEVTSKIKQIGDVRQLSIEDVDTI 385
L+G +A+K R+ +L L D Q+ + + K + + ++ + D D I
Sbjct: 427 LSGRHALKDRLNELGYVLDDGQLSNLFWRFKAVAEQKK-RVTDADLI 472
>At1g18500 [E] KOG2367 Alpha-isopropylmalate synthase/homocitrate synthase
Length = 660
Score = 130 bits (326), Expect = 4e-30
Identities = 104/377 (27%), Positives = 175/377 (45%), Gaps = 26/377 (6%)
Query: 7 PYAPSPNDLLSNVCN---FQLIESTLREGEQFASAFFSTEKKIEIAKALDDFGVDYIELT 63
P P P + + + + ++ ++TLR+GEQ A ++++K++IA+ L GVD IE
Sbjct: 71 PRRPRPEYIPNRISDPNYVRVFDTTLRDGEQSPGATLTSKEKLDIARQLAKLGVDIIEAG 130
Query: 64 SPVASEQSRSDCEAICKL--------GLKAKILTHIRCHMDDARVAVETXXXX----XXX 111
P AS+ + I + G I RC+ D A +
Sbjct: 131 FPAASKDDFEAVKTIAETVGNTVDENGYVPVICGLSRCNKKDIERAWDAVKYAKRPRIHT 190
Query: 112 XIGTSKFLREYSHGKDMNYIAKSAIEVIEFVKSKGLE-IRFSSEDSFRSDIVDLLNIYKT 170
I TS EY K + + A ++ F +S G E + FS ED+ RS+ L I
Sbjct: 191 FIATSDIHLEYKLKKTKAEVIEIARSMVRFARSLGCEDVEFSPEDAGRSEREYLYEILGE 250
Query: 171 VDKIGVNRVGIADTVGCANPRQVYELVRTLKS----VVSCDIECHFHDDTGCAIGNSYSA 226
V K G + I DTVG P + +L+ LK+ + + I H +D G + N+ S
Sbjct: 251 VIKAGATTLNIPDTVGITLPSEFGQLITDLKANTPGIENVVISTHCQNDLGLSTANTLSG 310
Query: 227 LEAGARLIDVSVLGIGERNGITSLGGLMARMIVSAPEYVKSKYKLHKLRDL---ENLVAD 283
AGAR ++V++ GIGER G SL ++ + + + R + +V +
Sbjct: 311 AHAGARQMEVTINGIGERAGNASLEEVVMAIKCRGDHVLGGLFTGIDTRHIVMTSKMVEE 370
Query: 284 AVSVNVPFNNPITGFCAFTHKAGIHAKAILANPSTYEILNPEDFGMKRYIH---FANRLT 340
+ + I G AF H++GIH +L + TYEI+ PE+ G++R +L+
Sbjct: 371 YTGMQTQPHKAIVGANAFAHESGIHQDGMLKHKGTYEIICPEEIGLERSNDAGIVLGKLS 430
Query: 341 GWNAIKSRVEQLNLHLS 357
G +A+K R+ +++ +L+
Sbjct: 431 GRHALKDRLTEVHSNLT 447
>SPBC17G9.11c [C] KOG0369 Pyruvate carboxylase
Length = 1185
Score = 53.1 bits (126), Expect = 7e-07
Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 26/226 (11%)
Query: 165 LNIYKTVDKIGVNRVGIADTVGCANPRQVYELVRTLKSV-VSCDIECHFHDDTGCAIGNS 223
+N+ + ++G++ +GI D G P+ L+ ++ I H HD G A+ +
Sbjct: 730 VNLVDKMVEMGIHILGIKDMAGVMKPKAARLLISAIREKHPELPIHVHTHDSAGTAVASM 789
Query: 224 YSALEAGARLIDVSVLGIGERNGITSLGGLMARMIVSAPEYVKSKYKLHKLRDLENLVAD 283
+ALEAGA ++DV+ + S G ++A + + + ++ ++LR++++ A
Sbjct: 790 AAALEAGADVVDVATDSMSGLTSQPSFGAVLASVDGTDKQL---EFDNNQLREIDSYWAQ 846
Query: 284 AVSVNVPFNNPITGFCAFTHKAGIHAKAILANPSTYEILNPEDFGMKRYIHFANRLTGWN 343
+ PF + I G + + +EI + +K T W
Sbjct: 847 MRLLYSPFESEIKGTDSDVY--------------NHEIPGGQLTNLKFQATSLGLGTQWA 892
Query: 344 AIKSRVEQLNLHLSDDQIKEVTSKIKQIGDVRQ------LSIEDVD 383
K + N L D I +VT K +GD+ Q LS EDV+
Sbjct: 893 ETKKAYIEANKLLGD--IIKVTPTSKVVGDLAQFMVQNKLSAEDVE 936
>At2g26800 [CE] KOG2368 Hydroxymethylglutaryl-CoA lyase
Length = 433
Score = 51.6 bits (122), Expect = 2e-06
Identities = 31/117 (26%), Positives = 54/117 (45%), Gaps = 4/117 (3%)
Query: 167 IYKTVDKIGVNRVGIADTVGCANPRQVYELVRTLKSVVSCD-IECHFHDDTGCAIGNSYS 225
+ K + +G + + DT+G P V ++ + +VV D + HFHD G A+ N
Sbjct: 288 VVKELYDMGCFEISLGDTIGIGTPGSVVPMLEAVMAVVPADKLAVHFHDTYGQALANILV 347
Query: 226 ALEAGARLIDVSVLGIGERNGITSLGGLMARMIVSAPEYVKSKYKLHKLRDLENLVA 282
+L+ G ++D S+ G+G G G + Y+ + +H DL L+A
Sbjct: 348 SLQMGISIVDSSIAGLG---GCPYAKGASGNVATEDVVYMLNGLGVHTNVDLGKLIA 401
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.135 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,600,366
Number of Sequences: 60738
Number of extensions: 854617
Number of successful extensions: 2232
Number of sequences better than 1.0e-05: 9
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2212
Number of HSP's gapped (non-prelim): 10
length of query: 393
length of database: 30,389,216
effective HSP length: 108
effective length of query: 285
effective length of database: 23,829,512
effective search space: 6791410920
effective search space used: 6791410920
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)