ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV6157 good S KOG2881 Function unknown Predicted membrane protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV6157 2115202 2114378 -275
(275 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR187w [S] KOG2881 Predicted membrane protein 248 7e-66
Hs8923861 [S] KOG2881 Predicted membrane protein 152 4e-37
SPAC17G8.08c [S] KOG2881 Predicted membrane protein 151 8e-37
7299965 [S] KOG2881 Predicted membrane protein 151 8e-37
CE27004 [S] KOG2881 Predicted membrane protein 144 2e-34
SPAC186.05c [S] KOG2881 Predicted membrane protein 135 8e-32
At5g36290 [S] KOG2881 Predicted membrane protein 132 5e-31
At1g68650 [S] KOG2881 Predicted membrane protein 127 1e-29
At1g25520 [S] KOG2881 Predicted membrane protein 124 1e-28
At4g13590 [S] KOG2881 Predicted membrane protein 100 2e-21
At1g64150 [S] KOG2881 Predicted membrane protein 96 7e-20
CE27005 [S] KOG2881 Predicted membrane protein 93 5e-19
>YBR187w [S] KOG2881 Predicted membrane protein
Length = 280
Score = 248 bits (633), Expect = 7e-66
Identities = 133/263 (50%), Positives = 177/263 (66%), Gaps = 4/263 (1%)
Query: 13 LFLCAVTAIEPVDENNQDYGSSEEPVTAFLLAISMIGVSEIGDKTFLIAALMAMRHDRLL 72
LF A A E + + GSS + +FL+++SMIG+SEIGDKTFLIAALMAMRH R+L
Sbjct: 16 LFTAAAAAATDA-ETSMESGSSSH-LKSFLMSVSMIGLSEIGDKTFLIAALMAMRHKRVL 73
Query: 73 VFSASTASLVIMTILGGLIGRTFTTLIPYKYTLFAAGILFLVFGYKLVLEGLEMPKNXXX 132
VFSA+ SL IMTIL G++G + + +YT F AGILFLVFGYKL +EGLEM K+
Sbjct: 74 VFSAAATSLAIMTILSGVVGHSAVAFLSERYTAFFAGILFLVFGYKLTMEGLEMSKDAGV 133
Query: 133 XXXXXXXXXXXXXQDINHTLHESEEGTVKDSNKYAKEKTNG--VFTKFKDFTSRYISGTW 190
+D+N + + E+G +K K + G + + ++ S S W
Sbjct: 134 EEEMAEVEEEIAIKDMNQDMDDVEKGGDTAYDKQLKNASIGKKIVHRIRELASFMFSPVW 193
Query: 191 IQIFTMVFLGEFGDRSQISTIAMASGSNFTYVMLGACIGHAICTGVAVIGGKLLASKISM 250
+QIF MVFLGE GDRSQIS IAMA+ S++ YV+ GA IGHAIC+G+AV+GGKLLA++IS+
Sbjct: 194 VQIFLMVFLGELGDRSQISIIAMATDSDYWYVIAGAVIGHAICSGLAVVGGKLLATRISI 253
Query: 251 RTVTLGGALSFFIFGFLYVYEAF 273
RT+TL +L FFIF +Y+Y+AF
Sbjct: 254 RTITLASSLLFFIFALMYIYQAF 276
>Hs8923861 [S] KOG2881 Predicted membrane protein
Length = 324
Score = 152 bits (385), Expect = 4e-37
Identities = 94/252 (37%), Positives = 144/252 (56%), Gaps = 15/252 (5%)
Query: 19 TAIEPVDENNQDYGSSEEP--VTAFLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSA 76
T PV N +D + + AF+ AIS+I VSE+GDKTF IAA+MAMR++RL V +
Sbjct: 73 TPAAPVHTNKEDPATQTNLGFIHAFVAAISVIIVSELGDKTFFIAAIMAMRYNRLTVLAG 132
Query: 77 STASLVIMTILGGLIGRTFTTLIPYKYTLFAAGILFLVFGYKLVLEGLEMPKNXXXXXXX 136
+ +L +MT L L G TT+IP YT + + +LF +FG +++ EGL+M +
Sbjct: 133 AMLALGLMTCLSVLFGYA-TTVIPRVYTYYVSTVLFAIFGIRMLREGLKMSPDEGQEEL- 190
Query: 137 XXXXXXXXXQDINHTLHESEEG--TVKDSNKYAKEKTNGVFTKFKDFTSRYISGTWIQIF 194
+++ L + +E K N +T T + +IS ++Q
Sbjct: 191 ---------EEVQAELKKKDEEFQRTKLLNGPGDVETGTSITVPQKKWLHFISPIFVQAL 241
Query: 195 TMVFLGEFGDRSQISTIAMASGSNFTYVMLGACIGHAICTGVAVIGGKLLASKISMRTVT 254
T+ FL E+GDRSQ++TI +A+ + V +G +GH +CTG+AVIGG+++A KIS+RTVT
Sbjct: 242 TLTFLAEWGDRSQLTTIVLAAREDPYGVAVGGTVGHCLCTGLAVIGGRMIAQKISVRTVT 301
Query: 255 LGGALSFFIFGF 266
+ G + F F F
Sbjct: 302 IIGGIVFLAFAF 313
>SPAC17G8.08c [S] KOG2881 Predicted membrane protein
Length = 287
Score = 151 bits (382), Expect = 8e-37
Identities = 94/276 (34%), Positives = 145/276 (52%), Gaps = 14/276 (5%)
Query: 12 ALFLCAVTAIEPVDENNQDYGSSEEP----------VTAFLLAISMIGVSEIGDKTFLIA 61
A+ L V A + V E D + + P + + + +ISMI EIGDKTF++A
Sbjct: 11 AVLLSTVVAKKIVGEGMADVSAIKHPEEVHPTNRDFLRSLIFSISMIFGCEIGDKTFIVA 70
Query: 62 ALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTTLIPYKYTLFAAGILFLVFGYKLVL 121
AL+A + RL VF+ S ++L IMT+LG L+G L P K T G+LF++FG K+++
Sbjct: 71 ALLAFENSRLTVFAGSYSALFIMTLLGVLLGHAAPLLFPRKLTDILGGVLFVIFGIKMLM 130
Query: 122 EGLEM--PKNXXXXXXXXXXXXXXXXQDINHTLHESEEGTVKDSNKYAKEKT--NGVFTK 177
E E+ K I+ L E + ++ T + + +K
Sbjct: 131 EAKEVMDSKESMSDEFQNVRNEIAANGPIDQLLEEGAAPSHYTGHRSRSGHTLMSQLKSK 190
Query: 178 FKDFTSRYISGTWIQIFTMVFLGEFGDRSQISTIAMASGSNFTYVMLGACIGHAICTGVA 237
++ + S +I+ F + F+ E+GDRSQI+TIAMA+ N V +GA +GHA CT +A
Sbjct: 191 GRNVMATLFSPLFIKAFALTFVSEWGDRSQIATIAMAASDNVYGVFMGANVGHACCTALA 250
Query: 238 VIGGKLLASKISMRTVTLGGALSFFIFGFLYVYEAF 273
VI GK +++KI + V G + F FG +Y Y+ F
Sbjct: 251 VISGKYISTKIKVHKVMFIGGILFIAFGLVYFYQGF 286
>7299965 [S] KOG2881 Predicted membrane protein
Length = 323
Score = 151 bits (382), Expect = 8e-37
Identities = 93/237 (39%), Positives = 132/237 (55%), Gaps = 20/237 (8%)
Query: 38 VTAFLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTT 97
+ AF +IS+I ++E+GDKTF IAA+MAMRH RL+VF + A+L +MT+L G
Sbjct: 95 IDAFTASISVILLTELGDKTFFIAAIMAMRHPRLIVFGGAIAALALMTVLSCAFGMA-AN 153
Query: 98 LIPYKYTLFAAGILFLVFGYKLVLEGLEMPKNXXXXXXXXXXXXXXXXQD-----INHTL 152
IP YT + + LFL+FG K++ +G +M +D +N L
Sbjct: 154 FIPKIYTYYISTALFLIFGLKMLYDGYKMKPTDAQEELEEVQTDLRKREDELDRDVNAAL 213
Query: 153 HESEEGTVKDSNKYAKEKTNGVFTKFKDFTSRYISGTWIQIFTMVFLGEFGDRSQISTIA 212
E S + +K + FT R ++ Q FTM FL E+GDRSQ++TI
Sbjct: 214 VNDAE-----SGRRRPQKRGATY-----FTMRILA----QAFTMTFLAEWGDRSQLTTII 259
Query: 213 MASGSNFTYVMLGACIGHAICTGVAVIGGKLLASKISMRTVTLGGALSFFIFGFLYV 269
+A+ + V+ G IGH ICTG+AVIGG+L+ASKIS+RTVT+ G + F F V
Sbjct: 260 LAASKDVYGVIAGGIIGHCICTGLAVIGGRLVASKISVRTVTIVGGIVFIGFAIYAV 316
>CE27004 [S] KOG2881 Predicted membrane protein
Length = 297
Score = 144 bits (362), Expect = 2e-34
Identities = 86/225 (38%), Positives = 131/225 (58%), Gaps = 13/225 (5%)
Query: 41 FLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTTLIP 100
FL + S+I VSE+GDKT+ IA +M+MRH RL VFS + +L +MT+L +G T +IP
Sbjct: 69 FLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLG-WITQVIP 127
Query: 101 YKYTLFAAGILFLVFGYKLVLEGLEMPKNXXXXXXXXXXXXXXXXQ-DINHTLHESEEGT 159
T + + LF +FG K++ EG M N + +++ E EG
Sbjct: 128 RAVTYYLSTALFALFGLKMLHEGWTMSPNEGQEGYEEAQAEVAKREGELDAGKFEMLEG- 186
Query: 160 VKDSNKYAKEKTNGVFTKFKDFTSRYISGTWIQIFTMVFLGEFGDRSQISTIAMASGSNF 219
++ +T +F FTSR +I+ F++ F+ E+GDRSQ++TI + + N
Sbjct: 187 --GGGVASQSETRKIFL----FTSRI----FIEAFSLTFVAEWGDRSQLTTIILGARENI 236
Query: 220 TYVMLGACIGHAICTGVAVIGGKLLASKISMRTVTLGGALSFFIF 264
V+ G +GHA+CTG+AVIGGK++A +IS+RTVTL G + F +F
Sbjct: 237 AGVIGGGILGHALCTGIAVIGGKIVAQRISVRTVTLIGGVVFLLF 281
>SPAC186.05c [S] KOG2881 Predicted membrane protein
Length = 262
Score = 135 bits (339), Expect = 8e-32
Identities = 83/235 (35%), Positives = 127/235 (53%), Gaps = 5/235 (2%)
Query: 43 LAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTTLIPYK 102
++ISMI E+GDK+F++ AL+A ++ R VF S +L MT L+GR L P
Sbjct: 29 MSISMIIGCELGDKSFIVTALLAYQYGRASVFFGSYLALFFMTSFAVLVGRAAPFLFPKS 88
Query: 103 YTLFAAGILFLVFGYKLVLEGLEMPKNXXXXXXXXXXXXXXXX--QDINHTLHESEEGTV 160
T G LFL+FG K++ E E+ ++ +D+ TL +
Sbjct: 89 ITHILGGTLFLIFGVKMLKESKEVRESQQSLENEFDKVEKIIVNEEDMKKTLELGLPASN 148
Query: 161 KDSNKYAKEKTNGVFTK--FKDFTSRYISGTWIQIFTMVFLGEFGDRSQISTIAMASGSN 218
+ S+ K+K VF+ FK+ S+ S +I+ F ++F+ E GDRSQI+TI M++
Sbjct: 149 RSSSTL-KDKFFKVFSMSCFKNLFSKKFSRAFIKAFALIFVSELGDRSQIATIVMSAKEK 207
Query: 219 FTYVMLGACIGHAICTGVAVIGGKLLASKISMRTVTLGGALSFFIFGFLYVYEAF 273
V +G IGH +CT VAVI G+ +++KI M V G + F IFG LY+++ F
Sbjct: 208 VLDVFIGVNIGHMLCTMVAVIVGRYISNKIEMYKVLFFGGIVFMIFGILYIFQGF 262
Score = 49.7 bits (117), Expect = 5e-06
Identities = 25/84 (29%), Positives = 47/84 (55%)
Query: 40 AFLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTTLI 99
AF+ A ++I VSE+GD++ + +M+ + L VF ++ T++ ++GR + I
Sbjct: 178 AFIKAFALIFVSELGDRSQIATIVMSAKEKVLDVFIGVNIGHMLCTMVAVIVGRYISNKI 237
Query: 100 PYKYTLFAAGILFLVFGYKLVLEG 123
LF GI+F++FG + +G
Sbjct: 238 EMYKVLFFGGIVFMIFGILYIFQG 261
>At5g36290 [S] KOG2881 Predicted membrane protein
Length = 325
Score = 132 bits (332), Expect = 5e-31
Identities = 81/214 (37%), Positives = 116/214 (53%), Gaps = 25/214 (11%)
Query: 40 AFLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTTLI 99
A + SMI V+EIGD+TF+IAALMAMRH + V S + ++L +MTIL +GR LI
Sbjct: 84 ALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGRIVPNLI 143
Query: 100 PYKYTLFAAGILFLVFGYKLVLEGLEMPKNXXXXXXXXXXXXXXXXQDINHTLHESEEGT 159
K+T AA +L+ FG +L+ + + E EE
Sbjct: 144 SRKHTNSAATVLYAFFGLRLLY---------------IAWRSTDSKSNQKKEMEEVEEKL 188
Query: 160 VKDSNKYAKEKTNGVFTKFKDFTSRYISGTWIQIFTMVFLGEFGDRSQISTIAMASGSNF 219
K T F+ SR+ + +++ F + FL E+GDRSQI+TIA+A+ N
Sbjct: 189 ESGQGK----------TPFRRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNA 238
Query: 220 TYVMLGACIGHAICTGVAVIGGKLLASKISMRTV 253
V +GA IGH +CT +AV+GG +LAS+IS RT+
Sbjct: 239 IGVAIGASIGHTVCTSLAVVGGSMLASRISQRTL 272
>At1g68650 [S] KOG2881 Predicted membrane protein
Length = 228
Score = 127 bits (320), Expect = 1e-29
Identities = 76/225 (33%), Positives = 118/225 (51%), Gaps = 14/225 (6%)
Query: 41 FLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTTLIP 100
F +++M +SEIGDKTF AA++AMR+ R LV + ++L++MTIL +G LI
Sbjct: 8 FTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAPNLIS 67
Query: 101 YKYTLFAAGILFLVFGYKLVLEGLEMPKNXXXXXXXXXXXXXXXXQDINHTLHESEEGTV 160
K+T LF FG + +G + D+ T +S+ +
Sbjct: 68 RKWTHHITTFLFFGFGLWSLWDGFK----EGGGSEELAEVEAELDSDLKKTNDQSKNSKI 123
Query: 161 KDSNKYAKEKTNGVFTKFKDFTSRYISGTWIQIFTMVFLGEFGDRSQISTIAMASGSNFT 220
+D K K + F + + S +++ F++ F GE+GD+SQ++TI +A+ N
Sbjct: 124 EDEQKKQK----------RPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPL 173
Query: 221 YVMLGACIGHAICTGVAVIGGKLLASKISMRTVTLGGALSFFIFG 265
V+LG + +CT AV+GGK LAS+IS R V L G + F IFG
Sbjct: 174 GVVLGGIVAQTLCTTAAVLGGKSLASQISERIVALSGGMLFIIFG 218
>At1g25520 [S] KOG2881 Predicted membrane protein
Length = 230
Score = 124 bits (312), Expect = 1e-28
Identities = 79/225 (35%), Positives = 121/225 (53%), Gaps = 12/225 (5%)
Query: 41 FLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTTLIP 100
F +++M VSEIGDKTF AA++AMR+ R LV + ++L++MTIL +G LI
Sbjct: 8 FTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGWAAPNLIS 67
Query: 101 YKYTLFAAGILFLVFGYKLVLEGLEMPKNXXXXXXXXXXXXXXXXQDINHTLHESEEGTV 160
K+T +LF FG + +G K D+ ++ +
Sbjct: 68 RKWTHHITTLLFFGFGLWSLWDGF---KEGGGGSEELAEVEAELDADL-----KANGKSP 119
Query: 161 KDSNKYAKEKTNGVFTKFKDFTSRYISGTWIQIFTMVFLGEFGDRSQISTIAMASGSNFT 220
KDS+K E + + F +++ S +++ F++ F GE+GD+SQ++TI +A+ N
Sbjct: 120 KDSSKREDENKK----QNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPF 175
Query: 221 YVMLGACIGHAICTGVAVIGGKLLASKISMRTVTLGGALSFFIFG 265
V+LG + +CT AVIGGK LAS+IS R V L G + F IFG
Sbjct: 176 GVVLGGVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFIIFG 220
>At4g13590 [S] KOG2881 Predicted membrane protein
Length = 273
Score = 100 bits (250), Expect = 2e-21
Identities = 71/220 (32%), Positives = 113/220 (51%), Gaps = 29/220 (13%)
Query: 39 TAFLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTTL 98
+ F A S+I VSEIGDKTF IAAL+AM++++ LV S +L +MTIL +IG+ F ++
Sbjct: 78 SGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVVIGKIFQSV 137
Query: 99 -IPYKYTL----FAAGILFLVFGYKLVLEGLEMPKNXXXXXXXXXXXXXXXXQDINHTLH 153
++ TL +AA L + FG K + + ++P ++ L
Sbjct: 138 PAQFQTTLPIGEYAAIALLMFFGLKSIKDAWDLPP-----------VEAKNGEETGIELG 186
Query: 154 ESEEGTVKDSNKYAKEKTNGVFTKFKDFTSRYISGTWIQIFTMVFLGEFGDRSQISTIAM 213
E E K +K+ TN + +K F++VF E+GDRS ++T+A+
Sbjct: 187 EYSEAEELVKEKASKKLTNPLEILWKS-------------FSLVFFAEWGDRSMLATVAL 233
Query: 214 ASGSNFTYVMLGACIGHAICTGVAVIGGKLLASKISMRTV 253
+ + V GA GH + T +A++GG LA+ IS + V
Sbjct: 234 GAAQSPLGVASGAIAGHLVATVLAIMGGAFLANYISEKLV 273
>At1g64150 [S] KOG2881 Predicted membrane protein
Length = 398
Score = 95.5 bits (236), Expect = 7e-20
Identities = 76/254 (29%), Positives = 119/254 (45%), Gaps = 20/254 (7%)
Query: 31 YGSSEEPVTAFLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGL 90
+G + + F A +I SE+GDKTF IAAL+A R+ VF + +L IMTI+ +
Sbjct: 149 FGDLGDISSGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVV 208
Query: 91 IGRTF---TTLIPYKY-------TLFAAGILFLVFGYKLVLE---GLEMPKNXXXXXXXX 137
+GRTF ++P+++ AA L + G +E GL M
Sbjct: 209 LGRTFHYVDEVLPFRFGGTDLPIDDIAAVCLLALLGLDFYVEKVTGLTMKMLIGFQAWFM 268
Query: 138 XXXXXXXXQDINHTLHESEEGTVKDSNKYAKEKTNGVFTKFKDFTSRYISGTWIQIFTMV 197
D S+EG + K A+ + + + + T I F +V
Sbjct: 269 VYFGVSTLLDA-----VSDEGKADEEQKEAELAVSELSGNGAGIVAA--ANTIISTFALV 321
Query: 198 FLGEFGDRSQISTIAMASGSNFTYVMLGACIGHAICTGVAVIGGKLLASKISMRTVTLGG 257
F+ E+GD+S STIA+A+ S+ V+ GA GH T +AV+GG LL + +S + + G
Sbjct: 322 FVAEWGDKSFFSTIALAAASSPLGVIAGALAGHGAATLLAVLGGSLLGNFLSEKAIAYVG 381
Query: 258 ALSFFIFGFLYVYE 271
+ F +F + V E
Sbjct: 382 GVLFLVFAAVTVAE 395
>CE27005 [S] KOG2881 Predicted membrane protein
Length = 255
Score = 92.8 bits (229), Expect = 5e-19
Identities = 61/179 (34%), Positives = 96/179 (53%), Gaps = 13/179 (7%)
Query: 41 FLLAISMIGVSEIGDKTFLIAALMAMRHDRLLVFSASTASLVIMTILGGLIGRTFTTLIP 100
FL + S+I VSE+GDKT+ IA +M+MRH RL VFS + +L +MT+L +G T +IP
Sbjct: 69 FLASFSVIVVSELGDKTWFIAVIMSMRHSRLTVFSGAMGALALMTVLSACLG-WITQVIP 127
Query: 101 YKYTLFAAGILFLVFGYKLVLEGLEMPKNXXXXXXXXXXXXXXXXQ-DINHTLHESEEGT 159
T + + LF +FG K++ EG M N + +++ E EG
Sbjct: 128 RAVTYYLSTALFALFGLKMLHEGWTMSPNEGQEGYEEAQAEVAKREGELDAGKFEMLEG- 186
Query: 160 VKDSNKYAKEKTNGVFTKFKDFTSRYISGTWIQIFTMVFLGEFGDRSQISTIAMASGSN 218
++ +T +F FTSR +I+ F++ F+ E+GDRSQ++TI + + N
Sbjct: 187 --GGGVASQSETRKIFL----FTSR----IFIEAFSLTFVAEWGDRSQLTTIILGAREN 235
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.325 0.140 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,337,976
Number of Sequences: 60738
Number of extensions: 471424
Number of successful extensions: 1470
Number of sequences better than 1.0e-05: 12
Number of HSP's better than 0.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1425
Number of HSP's gapped (non-prelim): 23
length of query: 275
length of database: 30,389,216
effective HSP length: 105
effective length of query: 170
effective length of database: 24,011,726
effective search space: 4081993420
effective search space used: 4081993420
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)