ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV6323 good H KOG2949 Coenzyme transport and metabolism Ketopantoate hydroxymethyltransferase
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV6323 2169334 2168381 -318
(318 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR176w [H] KOG2949 Ketopantoate hydroxymethyltransferase 317 1e-86
At2g46110 [H] KOG2949 Ketopantoate hydroxymethyltransferase 200 3e-51
At3g61530 [H] KOG2949 Ketopantoate hydroxymethyltransferase 199 3e-51
SPAC5H10.09c [H] KOG2949 Ketopantoate hydroxymethyltransferase 159 5e-39
>YBR176w [H] KOG2949 Ketopantoate hydroxymethyltransferase
Length = 312
Score = 317 bits (812), Expect = 1e-86
Identities = 158/300 (52%), Positives = 212/300 (70%), Gaps = 2/300 (0%)
Query: 19 NSSAVAATAKAVHQL-TVKDIMAKYHRRNPISMVTAYDYITASWAQNANSDMILVGDSVA 77
+S +TAK V + T++DI KY P+SM TAYD+ITA+W AN D++LVGDS+A
Sbjct: 11 SSKRFFSTAKNVVKYNTIQDIRNKYFTGTPLSMCTAYDFITATWVNKANCDLLLVGDSLA 70
Query: 78 MCSLGYESTTQLSLDEFQYHVGAVCRAPGPAFVVVDMPFGSFERSISDGIGNAFQLLHLN 137
M SLGY+ST LSL+EF+YHV +VCRA G + VVVDMPFG+FE ISDG+ NA ++ L+
Sbjct: 71 MTSLGYDSTITLSLNEFKYHVASVCRAEGSSMVVVDMPFGTFESGISDGLKNAIDIMKLD 130
Query: 138 PKVQAVKVECG-LSQDDYSLEYIKELVRRGISVIGHIGLTPQRVHSLGGYKAQGGQQSTD 196
KV +VKVE G ++D Y++++I+EL RGI V+ HIGLTPQ+VHSLGGYK QG +
Sbjct: 131 SKVTSVKVEVGSYTKDKYAMKFIEELCSRGIPVMAHIGLTPQKVHSLGGYKVQGSKSLLQ 190
Query: 197 AVALYNVSQTLQQIGCFGIVLECIPHKISSVITDKLHIPTIGIGAGPDTSGQVLVQSDVL 256
LY + LQ+IGC+ I++EC+PHK++ IT KL +PTIGIGAG TSGQVLV SD+L
Sbjct: 191 MQELYETAMQLQKIGCWSILIECVPHKMAQFITSKLSVPTIGIGAGNGTSGQVLVISDLL 250
Query: 257 GMLPGHKPKFVKMFADFKKDAVSALSQYVQEVHDKSFPHIGHHTFKVNDEVYQDFISKID 316
GM PKFVK + A L +Y+ V D++FP G HTFKV ++++ +F+S I+
Sbjct: 251 GMQGDSVPKFVKQAVNMTDIATQGLKEYIASVEDRTFPERGTHTFKVKEDLWNEFLSSIN 310
>At2g46110 [H] KOG2949 Ketopantoate hydroxymethyltransferase
Length = 347
Score = 200 bits (508), Expect = 3e-51
Identities = 114/289 (39%), Positives = 168/289 (57%), Gaps = 10/289 (3%)
Query: 32 QLTVKDIMAKYHRRNPISMVTAYDYITASWAQNANSDMILVGDSVAMCSLGYESTTQLSL 91
++T+ + K+ R PI++VTAYDY +A A D+ LVGDS +M G+++T +SL
Sbjct: 41 RVTLTHLRQKHRRGEPITVVTAYDYPSAVHLDTAGIDVCLVGDSASMVVHGHDTTLPISL 100
Query: 92 DEFQYHVGAVCRAPGPAFVVVDMPFGSFERSISDGIGNAFQLLHLNPKVQAVKVECGLSQ 151
DE H AV R +V D+PFG++E S S + A ++L + A+K+E G +
Sbjct: 101 DEMLVHCRAVARGAKRPLLVGDLPFGTYESSSSQAVDTAVRVLK-EGGMDAIKLEGGSAS 159
Query: 152 DDYSLEYIKELVRRGISVIGHIGLTPQRVHSLGGYKAQGGQQSTDAVALYNVSQTLQQIG 211
+ K +V GI+VIGH+GLTPQ + LGG++ Q G+ AV + + LQ+ G
Sbjct: 160 ---RITAAKAIVEAGIAVIGHVGLTPQAISVLGGFRPQ-GRNIASAVKVVETAMALQEAG 215
Query: 212 CFGIVLECIPHKISSVITDKLHIPTIGIGAGPDTSGQVLVQSDVLGML--PGH---KPKF 266
CF +VLEC+P +++ T L IPTIGIGAGP SGQVLV D+LGM+ P H PKF
Sbjct: 216 CFSVVLECVPPPVAAAATSALKIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKF 275
Query: 267 VKMFADFKKDAVSALSQYVQEVHDKSFPHIGHHTFKVNDEVYQDFISKI 315
K +A+ + AL +Y +EV K FP H +K+ F++++
Sbjct: 276 CKQYANVGEVINKALMEYKEEVSKKVFPGPSHSPYKITASELDGFLTEL 324
>At3g61530 [H] KOG2949 Ketopantoate hydroxymethyltransferase
Length = 354
Score = 199 bits (507), Expect = 3e-51
Identities = 113/289 (39%), Positives = 167/289 (57%), Gaps = 10/289 (3%)
Query: 32 QLTVKDIMAKYHRRNPISMVTAYDYITASWAQNANSDMILVGDSVAMCSLGYESTTQLSL 91
++T+ + K+ + PI+MVTAYDY +A A D+ LVGDS AM GY++T +SL
Sbjct: 43 RVTLTQLRQKHRKGEPITMVTAYDYPSAVHIDTAGIDVCLVGDSAAMVVHGYDTTLPISL 102
Query: 92 DEFQYHVGAVCRAPGPAFVVVDMPFGSFERSISDGIGNAFQLLHLNPKVQAVKVECGLSQ 151
+E H AV R +V D+PFG++E S + + A ++L + A+K+E G
Sbjct: 103 EEMLVHCRAVARGAKRPLLVGDLPFGTYESSTNQAVDTAVRVLK-EGGMDAIKLEGG--- 158
Query: 152 DDYSLEYIKELVRRGISVIGHIGLTPQRVHSLGGYKAQGGQQSTDAVALYNVSQTLQQIG 211
+ K +V GI+V+GH+GLTPQ + LGG++ Q G+ AV + + LQ+ G
Sbjct: 159 SPSRITAAKSIVEAGIAVMGHVGLTPQAISVLGGFRPQ-GKNIASAVKVVETAMALQEAG 217
Query: 212 CFGIVLECIPHKISSVITDKLHIPTIGIGAGPDTSGQVLVQSDVLGML--PGH---KPKF 266
CF +VLEC+P +++ T L+IPTIGIGAGP SGQVLV D+LGM+ P H PKF
Sbjct: 218 CFSVVLECVPPPVAAAATSALNIPTIGIGAGPFCSGQVLVYHDLLGMMQHPHHAKVTPKF 277
Query: 267 VKMFADFKKDAVSALSQYVQEVHDKSFPHIGHHTFKVNDEVYQDFISKI 315
K +A + AL +Y +EV FP H +K++ F+S++
Sbjct: 278 CKQYAQVGEVINKALLEYKEEVSKHLFPGPSHSPYKISSSDLDGFLSEL 326
>SPAC5H10.09c [H] KOG2949 Ketopantoate hydroxymethyltransferase
Length = 267
Score = 159 bits (402), Expect = 5e-39
Identities = 93/270 (34%), Positives = 143/270 (52%), Gaps = 7/270 (2%)
Query: 29 AVHQLTVKDIMAKYHRRNPISMVTAYDYITASWAQNANSDMILVGDSVAMCSLGYESTTQ 88
++ Q+T+ + + +TAYD + ++LVGDS+ M + G+ +T
Sbjct: 2 SLKQITISTLRQWKLANKKFACITAYDASFSRLFAEQGMPVMLVGDSLGMTAQGHSTTLP 61
Query: 89 LSLDEFQYHVGAVCRAPGPAFVVVDMPFGSFERSISDGIGNAFQLLHLNPKVQAVKVECG 148
+S+++ YH +V R ++ D+PF S+ + D NA ++ + VK+E G
Sbjct: 62 VSVEDIAYHTKSVRRGAPNRLLMADLPFMSYS-TWEDACKNAATVMRAGANI--VKIEGG 118
Query: 149 LSQDDYSLEYIKELVRRGISVIGHIGLTPQRVHSLGGYKAQGGQQSTDAVALYNVSQTLQ 208
++ E ++ L R + V GH+GLTPQ V+ GGYK QG +QS A + N Q L+
Sbjct: 119 ---GNWIFEIVQRLTERSVPVAGHLGLTPQSVNIFGGYKIQGREQSAAARLIENAQQ-LE 174
Query: 209 QIGCFGIVLECIPHKISSVITDKLHIPTIGIGAGPDTSGQVLVQSDVLGMLPGHKPKFVK 268
+ G +VLECIP ++ IT + IPTIGIGAG T GQ+LV D LG+ G PKF K
Sbjct: 175 KFGAQLLVLECIPESLAEQITKTISIPTIGIGAGKHTDGQILVMHDALGITGGRPPKFAK 234
Query: 269 MFADFKKDAVSALSQYVQEVHDKSFPHIGH 298
F D +A+ +Y+ EV +P H
Sbjct: 235 NFLSGAGDIRTAIQRYIYEVEQGLYPAEEH 264
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.320 0.136 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,106,087
Number of Sequences: 60738
Number of extensions: 774186
Number of successful extensions: 1721
Number of sequences better than 1.0e-05: 4
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1708
Number of HSP's gapped (non-prelim): 4
length of query: 318
length of database: 30,389,216
effective HSP length: 106
effective length of query: 212
effective length of database: 23,950,988
effective search space: 5077609456
effective search space used: 5077609456
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)