ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV6347 check: MH R KOG0266 General function prediction only WD40 repeat-containing protein
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV6347 2176758 2175778 -327
(327 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR175w [R] KOG0266 WD40 repeat-containing protein 325 4e-89
7290331 [R] KOG0266 WD40 repeat-containing protein 168 9e-42
Hs16554627 [R] KOG0266 WD40 repeat-containing protein 166 6e-41
Hs9506645 [R] KOG0266 WD40 repeat-containing protein 159 7e-39
CE00901 [R] KOG0266 WD40 repeat-containing protein 157 2e-38
At3g49660 [R] KOG0266 WD40 repeat-containing protein 147 2e-35
7302720 [R] KOG0266 WD40 repeat-containing protein 142 9e-34
CE06574 [R] KOG0266 WD40 repeat-containing protein 133 3e-31
SPBC354.03 [R] KOG0266 WD40 repeat-containing protein 130 2e-30
At4g02730 [R] KOG0266 WD40 repeat-containing protein 125 8e-29
CE11748 [R] KOG0266 WD40 repeat-containing protein 121 2e-27
SPAC630.14c [R] KOG0266 WD40 repeat-containing protein 89 7e-18
YCR084c [R] KOG0266 WD40 repeat-containing protein 84 2e-16
Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 84 2e-16
Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 84 2e-16
SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18... 84 3e-16
SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein 80 3e-15
7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 80 3e-15
Hs4557741 [S] KOG0295 WD40 repeat-containing protein 79 9e-15
At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein 79 1e-14
Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subu... 78 2e-14
CE15742 [R] KOG0275 Conserved WD40 repeat-containing protein 78 2e-14
SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 77 3e-14
CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 77 3e-14
CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 77 3e-14
Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein 77 3e-14
SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 77 4e-14
YMR146c [JT] KOG0643 Translation initiation factor 3 subunit i (... 76 8e-14
At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 75 1e-13
At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 75 1e-13
Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp... 74 2e-13
At5g50230 [R] KOG0288 WD40 repeat protein TipD 74 3e-13
7302979 [S] KOG0295 WD40 repeat-containing protein 74 4e-13
SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1 72 8e-13
7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 72 8e-13
Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 72 1e-12
CE05533 [A] KOG0285 Pleiotropic regulator 1 72 1e-12
At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 s... 72 1e-12
Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 72 1e-12
Hs13376840 [R] KOG4155 FOG: WD40 repeat 72 1e-12
Hs22046076 [R] KOG0266 WD40 repeat-containing protein 70 3e-12
Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 70 5e-12
Hs21071065 [K] KOG0263 Transcription initiation factor TFIID sub... 70 5e-12
Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 70 5e-12
Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 70 5e-12
Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 70 5e-12
CE29339 [S] KOG0295 WD40 repeat-containing protein 69 7e-12
YMR116c [T] KOG0279 G protein beta subunit-like protein 69 9e-12
Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) pro... 69 9e-12
Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein 69 1e-11
ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit ... 69 1e-11
CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 69 1e-11
CE03274 [A] KOG0640 mRNA cleavage stimulating factor complex; su... 69 1e-11
7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Sl... 69 1e-11
At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 s... 68 2e-11
7300458 [R] KOG0275 Conserved WD40 repeat-containing protein 68 2e-11
7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 68 2e-11
7299285 [R] KOG4155 FOG: WD40 repeat 68 2e-11
Hs4557491 [A] KOG0640 mRNA cleavage stimulating factor complex; ... 67 3e-11
CE07020 [R] KOG0288 WD40 repeat protein TipD 67 3e-11
SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing pro... 67 4e-11
Hs8923881 [R] KOG0266 WD40 repeat-containing protein 67 4e-11
CE18408 [R] KOG4155 FOG: WD40 repeat 67 4e-11
At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 s... 67 4e-11
Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/... 67 5e-11
Hs21071067 [K] KOG0263 Transcription initiation factor TFIID sub... 67 5e-11
Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)... 67 5e-11
CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 67 5e-11
At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 s... 67 5e-11
SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 66 6e-11
YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 66 8e-11
At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit 66 8e-11
YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 65 1e-10
At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S ... 65 1e-10
7303687 [K] KOG0263 Transcription initiation factor TFIID subuni... 65 1e-10
7300370 [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 65 1e-10
Hs4505895 [A] KOG0285 Pleiotropic regulator 1 65 1e-10
At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 65 1e-10
YBR198c [K] KOG0263 Transcription initiation factor TFIID subuni... 65 2e-10
SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing... 65 2e-10
Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 s... 64 2e-10
YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rR... 64 3e-10
YJL112w [R] KOG4155 FOG: WD40 repeat 64 3e-10
YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein 64 3e-10
At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit 64 3e-10
7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit 64 3e-10
Hs6912360 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 64 4e-10
At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein 64 4e-10
YKR036c [R] KOG4155 FOG: WD40 repeat 63 5e-10
SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID su... 63 5e-10
Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S... 63 5e-10
At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S ... 63 5e-10
ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 63 7e-10
At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit 63 7e-10
SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor an... 62 9e-10
Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and ... 62 9e-10
At5g14530 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase comp... 62 9e-10
At4g34460 [R] KOG0286 G-protein beta subunit 62 9e-10
SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 62 1e-09
SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein 62 1e-09
Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and... 62 1e-09
7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 62 1e-09
7297395 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase comple... 62 1e-09
7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 62 1e-09
SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subun... 62 1e-09
Hs14150171 [S] KOG1407 WD40 repeat protein 62 1e-09
CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein 62 1e-09
CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 61 2e-09
CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 61 2e-09
CE02043 [R] KOG0289 mRNA splicing factor 61 2e-09
7292737 [A] KOG0285 Pleiotropic regulator 1 61 2e-09
At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein 61 3e-09
7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein 61 3e-09
CE23942 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 ... 60 3e-09
CE17845 [R] KOG0286 G-protein beta subunit 60 3e-09
7303694 [A] KOG0291 WD40-repeat-containing subunit of the 18S rR... 60 3e-09
SPBC32H8.07 [R] KOG0286 G-protein beta subunit 60 4e-09
At5g60940 [A] KOG0640 mRNA cleavage stimulating factor complex; ... 60 4e-09
SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID su... 60 6e-09
Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein 60 6e-09
Hs17434629 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase com... 60 6e-09
7300980 [R] KOG4155 FOG: WD40 repeat 60 6e-09
SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit 59 7e-09
Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit 59 7e-09
At4g29830 [R] KOG4155 FOG: WD40 repeat 59 7e-09
7302603 [R] KOG0289 mRNA splicing factor 59 7e-09
7302600 [R] KOG4155 FOG: WD40 repeat 59 7e-09
Hs7108333_2 [R] KOG4155 FOG: WD40 repeat 59 7e-09
Hs4502123_2 [R] KOG4155 FOG: WD40 repeat 59 7e-09
Hs4504053 [R] KOG0286 G-protein beta subunit 59 1e-08
Hs22047819 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 59 1e-08
CE02005 [R] KOG0288 WD40 repeat protein TipD 59 1e-08
At2g26060 [R] KOG0645 WD40 repeat protein 59 1e-08
At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i... 59 1e-08
7291678 [R] KOG0641 WD40 repeat protein 59 1e-08
Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4... 58 2e-08
7301704 [R] KOG4155 FOG: WD40 repeat 58 2e-08
SPBC6B1.10 [S] KOG0282 mRNA splicing factor 58 2e-08
SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (c... 58 2e-08
At1g71840 [S] KOG0296 Angio-associated migratory cell protein (c... 58 2e-08
SPBC32F12.02 [R] KOG4155 FOG: WD40 repeat 57 3e-08
Hs7657381 [R] KOG0289 mRNA splicing factor 57 3e-08
Hs22052079 [R] KOG0266 WD40 repeat-containing protein 57 3e-08
Hs11321585 [R] KOG0286 G-protein beta subunit 57 3e-08
CE04149 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase comple... 57 3e-08
7301840 [R] KOG0288 WD40 repeat protein TipD 57 3e-08
7290304 [S] KOG0310 Conserved WD40 repeat-containing protein 57 3e-08
YBR103w [B] KOG0273 Beta-transducin family (WD-40 repeat) protein 57 4e-08
At1g10580 [S] KOG0282 mRNA splicing factor 57 4e-08
7303130 [R] KOG0645 WD40 repeat protein 57 4e-08
7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and re... 57 4e-08
Hs18550925 [S] KOG0295 WD40 repeat-containing protein 57 5e-08
At3g42660 [R] KOG1274 WD40 repeat protein 57 5e-08
Hs18677720 [R] KOG0266 WD40 repeat-containing protein 56 6e-08
Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 56 6e-08
CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 56 6e-08
7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 56 6e-08
7303631 [S] KOG0308 Conserved WD40 repeat-containing protein 56 6e-08
7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2 56 6e-08
7290895 [R] KOG0286 G-protein beta subunit 56 6e-08
7301145 [R] KOG0644 Uncharacterized conserved protein contains W... 56 8e-08
Hs4505465_2 [TU] KOG1786 Lysosomal trafficking regulator LYST an... 56 8e-08
Hs13994164_1 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins 56 8e-08
SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein 55 1e-07
ECU08g1250 [U] KOG0276 Vesicle coat complex COPI beta' subunit 55 1e-07
At2g26490 [R] KOG4155 FOG: WD40 repeat 55 1e-07
SPAC4D7.05 [JT] KOG0643 Translation initiation factor 3 subunit ... 55 1e-07
Hs20357529 [R] KOG0286 G-protein beta subunit 55 1e-07
ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID sub... 55 1e-07
At5g53500 [S] KOG0283 WD40 repeat-containing protein 55 1e-07
YPL151c [A] KOG0285 Pleiotropic regulator 1 54 2e-07
SPAC821.08c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 a... 54 2e-07
CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 54 2e-07
At2g46280 [JT] KOG0643 Translation initiation factor 3 subunit i... 54 2e-07
At1g04510 [R] KOG0289 mRNA splicing factor 54 2e-07
SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA... 54 3e-07
SPBC16A3.05c [A] KOG0647 mRNA export protein (contains WD40 repe... 54 3e-07
Hs4506399 [A] KOG0647 mRNA export protein (contains WD40 repeats) 54 3e-07
At1g48630 [T] KOG0279 G protein beta subunit-like protein 54 3e-07
Hs7705377 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and... 54 4e-07
Hs5174447 [T] KOG0279 G protein beta subunit-like protein 54 4e-07
Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contain... 54 4e-07
CE06090 [T] KOG0279 G protein beta subunit-like protein 54 4e-07
CE01695 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 54 4e-07
At1g18080 [T] KOG0279 G protein beta subunit-like protein 54 4e-07
SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein 53 5e-07
Hs4503513 [JT] KOG0643 Translation initiation factor 3 subunit i... 53 5e-07
Hs20143912 [R] KOG0266 WD40 repeat-containing protein 53 5e-07
CE02186 [R] KOG0286 G-protein beta subunit 53 5e-07
7300806 [S] KOG0282 mRNA splicing factor 53 5e-07
SPBC887.04c [I] KOG0301 Phospholipase A2-activating protein (con... 53 7e-07
Hs4826956 [A] KOG0291 WD40-repeat-containing subunit of the 18S ... 53 7e-07
Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit ... 53 7e-07
CE25232 [S] KOG0310 Conserved WD40 repeat-containing protein 53 7e-07
At5g66240 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase comp... 53 7e-07
At3g49180 [R] KOG0646 WD40 repeat protein 53 7e-07
7299015 [S] KOG1407 WD40 repeat protein 53 7e-07
7293146 [R] KOG0286 G-protein beta subunit 53 7e-07
YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rR... 52 9e-07
YDR267c [R] KOG0645 WD40 repeat protein 52 9e-07
HsM8923075 [R] KOG0266 WD40 repeat-containing protein 52 9e-07
At5g25150 [K] KOG0263 Transcription initiation factor TFIID subu... 52 9e-07
At3g44530 [DK] KOG0973 Histone transcription regulator HIRA WD r... 52 9e-07
At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S ... 52 9e-07
7296910 [JT] KOG0643 Translation initiation factor 3 subunit i (... 52 9e-07
Hs5729852 [R] KOG0286 G-protein beta subunit 52 1e-06
Hs20336270 [R] KOG0286 G-protein beta subunit 52 1e-06
7294830 [K] KOG0263 Transcription initiation factor TFIID subuni... 52 1e-06
Hs5902134 [Z] KOG0303 Actin-binding protein Coronin contains WD4... 52 2e-06
Hs21361641 [R] KOG0266 WD40 repeat-containing protein 52 2e-06
Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein 52 2e-06
At3g18130 [T] KOG0279 G protein beta subunit-like protein 52 2e-06
At2g37670 [S] KOG0283 WD40 repeat-containing protein 52 2e-06
7301852 [S] KOG0283 WD40 repeat-containing protein 52 2e-06
7297305 [T] KOG0279 G protein beta subunit-like protein 52 2e-06
YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (... 51 2e-06
Hs5901892 [R] KOG1274 WD40 repeat protein 51 2e-06
At3g15470 [S] KOG0283 WD40 repeat-containing protein 51 2e-06
Hs4757988 [R] KOG0645 WD40 repeat protein 51 3e-06
Hs13376751 [R] KOG0266 WD40 repeat-containing protein 51 3e-06
Hs4759276 [A] KOG0299 U3 snoRNP-associated protein (contains WD4... 50 3e-06
Hs22059675 [S] KOG0283 WD40 repeat-containing protein 50 3e-06
ECU04g1250 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 an... 50 3e-06
At5g24320 [S] KOG0283 WD40 repeat-containing protein 50 3e-06
7290520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and A... 50 3e-06
YNL006w [R] KOG0315 G-protein beta subunit-like protein (contain... 50 4e-06
Hs5902034 [S] KOG0270 WD40 repeat-containing protein 50 4e-06
Hs4826970 [R] KOG1273 WD40 repeat protein 50 4e-06
Hs20548461 [R] KOG0644 Uncharacterized conserved protein contain... 50 4e-06
At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein 50 4e-06
7293188 [D] KOG0267 Microtubule severing protein katanin p80 sub... 50 4e-06
SPAC343.04c [S] KOG0293 WD40 repeat-containing protein 50 6e-06
Hs22043408 [JT] KOG0643 Translation initiation factor 3 subunit ... 50 6e-06
Hs16445438 [R] KOG0644 Uncharacterized conserved protein contain... 50 6e-06
Hs16445436 [R] KOG0644 Uncharacterized conserved protein contain... 50 6e-06
Hs11055998 [R] KOG0286 G-protein beta subunit 50 6e-06
CE25603 [JT] KOG0643 Translation initiation factor 3 subunit i (... 50 6e-06
At5g42010 [S] KOG0283 WD40 repeat-containing protein 50 6e-06
At4g34380 [R] KOG4155 FOG: WD40 repeat 50 6e-06
At4g32551 [R] KOG0266 WD40 repeat-containing protein 50 6e-06
At1g64610 [S] KOG0283 WD40 repeat-containing protein 50 6e-06
YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit 49 8e-06
CE18673 [U] KOG0276 Vesicle coat complex COPI beta' subunit 49 8e-06
At3g16650 [A] KOG0285 Pleiotropic regulator 1 49 8e-06
Hs22043515 [S] KOG0295 WD40 repeat-containing protein 49 1e-05
At3g16830 [R] KOG0266 WD40 repeat-containing protein 49 1e-05
7302313 [Z] KOG0303 Actin-binding protein Coronin contains WD40 ... 49 1e-05
Hs18553366_1 [R] KOG4155 FOG: WD40 repeat 49 1e-05
>YBR175w [R] KOG0266 WD40 repeat-containing protein
Length = 315
Score = 325 bits (834), Expect = 4e-89
Identities = 167/314 (53%), Positives = 227/314 (72%), Gaps = 5/314 (1%)
Query: 16 MLQFDKQVLPASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMK-LTTTHKECINC 74
M QF V +G +T +ISPDG+ +AI Q ++L+Y+I+ + + L T+H +
Sbjct: 1 MFQFVTPVGTQNGLKATCAKISPDGQFLAITQGLNILIYDINRRTVSQTLVTSHARPFSE 60
Query: 75 LCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESI 134
LCWSPD +CIA+ S+DF+VEI H+ YG + +GHTAPVIS+ +N KGN+L +SSMDESI
Sbjct: 61 LCWSPDGQCIATASDDFSVEIIHLSYGLLHTFIGHTAPVISLTFNRKGNLLFTSSMDESI 120
Query: 135 KEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYD 194
K W L+G+ +KT+SAHS+AVVS+D+P DSSILSSGSYDGLIRIFD E+GHCLKTLTYD
Sbjct: 121 KIWDTLNGSLMKTISAHSEAVVSVDVPMNDSSILSSGSYDGLIRIFDAETGHCLKTLTYD 180
Query: 195 KDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKY 254
KDW E+GVVPIS VKFS N ++LLVKSLD VVK+W+ G VVRTF E K L +
Sbjct: 181 KDWKRENGVVPISQVKFSENARYLLVKSLDGVVKIWDCIGGCVVRTFQVQPLE-KGVLHH 239
Query: 255 NCGLELIYPQ-GKDPLVISGNDSGSMCVWNVYSKNLVQKIDEK--HRNSPLISISASYDK 311
+CG++ + P+ G PLVISG ++G + WN +K+L+Q +D H +SP++SI +
Sbjct: 240 SCGMDFLNPEDGSTPLVISGYENGDIYCWNSDTKSLLQLLDGSLYHHSSPVMSIHCFGNI 299
Query: 312 VATLSLNGECNLFR 325
+ +L+LNG+C L+R
Sbjct: 300 MCSLALNGDCCLWR 313
>7290331 [R] KOG0266 WD40 repeat-containing protein
Length = 361
Score = 168 bits (426), Expect = 9e-42
Identities = 98/275 (35%), Positives = 156/275 (56%), Gaps = 17/275 (6%)
Query: 21 KQVLPASGKISTSCQISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSP 79
K L K ++ + SP+GE +A ++ ++ K K + HK I+ + WS
Sbjct: 65 KFTLAGHTKAVSAVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 124
Query: 80 DSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWH 138
DS+ + SGS+D T+++ + G+ ++ L GH+ V +N + N++ S S DES++ W
Sbjct: 125 DSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 184
Query: 139 VLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWI 198
V +G LKT+ AHSD V ++ + D S++ S SYDGL RI+DT SG CLKTL
Sbjct: 185 VRTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL------- 236
Query: 199 AEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGL 258
+D P+S VKFS NGK++L +LDN +KLW+Y++G ++T+ E KY
Sbjct: 237 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE-----KYCIFA 291
Query: 259 ELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKI 293
GK ++SG++ + +WN+ SK +VQK+
Sbjct: 292 NFSVTGGK--WIVSGSEDNMVYIWNLQSKEVVQKL 324
Score = 84.3 bits (207), Expect = 2e-16
Identities = 65/233 (27%), Positives = 111/233 (46%), Gaps = 9/233 (3%)
Query: 18 QFDKQVLPASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCW 77
+F+K + IS S L++ + + V+E+S+ K +K H + C +
Sbjct: 105 KFEKTISGHKLGISDVAWSSDSRLLVSGSDDKTLKVWELSTGKSLKTLKGHSNYVFCCNF 164
Query: 78 SPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKE 136
+P S I SGS D +V I + G+ ++ L H+ PV ++ +N G+++ SSS D +
Sbjct: 165 NPQSNLIVSGSFDESVRIWDVRTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 224
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
W SG LKT+ + VS + + + + D ++++D G CLKT T K+
Sbjct: 225 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 284
Query: 197 WIAEDGVVPISTVKFS-RNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQET 248
E + FS GK+++ S DN+V +W VV+ L H +T
Sbjct: 285 ---EKYCI---FANFSVTGGKWIVSGSEDNMVYIWNLQSKEVVQK-LQGHTDT 330
>Hs16554627 [R] KOG0266 WD40 repeat-containing protein
Length = 334
Score = 166 bits (419), Expect = 6e-41
Identities = 98/275 (35%), Positives = 154/275 (55%), Gaps = 17/275 (6%)
Query: 21 KQVLPASGKISTSCQISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSP 79
K L K +S + SP+GE +A ++ ++ K K + HK I+ + WS
Sbjct: 38 KFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSS 97
Query: 80 DSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWH 138
DS + S S+D T++I + G+ ++ L GH+ V +N + N++ S S DES++ W
Sbjct: 98 DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWD 157
Query: 139 VLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWI 198
V +G LKT+ AHSD V ++ + D S++ S SYDGL RI+DT SG CLKTL
Sbjct: 158 VKTGKCLKTLPAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTL------- 209
Query: 199 AEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGL 258
+D P+S VKFS NGK++L +LDN +KLW+Y++G ++T+ E KY
Sbjct: 210 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNE-----KYCIFA 264
Query: 259 ELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKI 293
GK ++SG++ + +WN+ +K +VQK+
Sbjct: 265 NFSVTGGK--WIVSGSEDNLVYIWNLQTKEIVQKL 297
Score = 85.5 bits (210), Expect = 1e-16
Identities = 60/224 (26%), Positives = 107/224 (46%), Gaps = 8/224 (3%)
Query: 18 QFDKQVLPASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCW 77
+F+K + IS S L++ + + ++++SS K +K H + C +
Sbjct: 78 KFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNF 137
Query: 78 SPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKE 136
+P S I SGS D +V I + G+ ++ L H+ PV ++ +N G+++ SSS D +
Sbjct: 138 NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 197
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
W SG LKT+ + VS + + + + D ++++D G CLKT T K+
Sbjct: 198 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKN 257
Query: 197 WIAEDGVVPISTVKFS-RNGKFLLVKSLDNVVKLWEYTRGTVVR 239
E + FS GK+++ S DN+V +W +V+
Sbjct: 258 ---EKYCI---FANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQ 295
>Hs9506645 [R] KOG0266 WD40 repeat-containing protein
Length = 330
Score = 159 bits (401), Expect = 7e-39
Identities = 94/264 (35%), Positives = 147/264 (55%), Gaps = 17/264 (6%)
Query: 32 TSCQISPDGELIAICQNTDMLV-YEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSED 90
+S + SP+GE +A +++ + K K H I+ + WS DS + S S+D
Sbjct: 45 SSVKFSPNGEWLASSSADRLIIIWGAYDGKYEKTLYGHNLEISDVAWSSDSSRLVSASDD 104
Query: 91 FTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMS 149
T+++ + G+ ++ L GH+ V +N N++ S S DE++K W V +G LKT+S
Sbjct: 105 KTLKLWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDETVKIWEVKTGKCLKTLS 164
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
AHSD V ++ S++ SGSYDGL RI+D SG CLKTL +D P+S V
Sbjct: 165 AHSDPVSAVHF-NCSGSLIVSGSYDGLCRIWDAASGQCLKTLV-------DDDNPPVSFV 216
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL 269
KFS NGK++L +LDN +KLW+Y+RG ++T+ E KY GK
Sbjct: 217 KFSPNGKYILTATLDNTLKLWDYSRGRCLKTYTGQKNE-----KYCIFANFSVTGGK--W 269
Query: 270 VISGNDSGSMCVWNVYSKNLVQKI 293
++SG++ + +WN+ +K +VQK+
Sbjct: 270 IVSGSEDNLVYIWNLQTKEIVQKL 293
>CE00901 [R] KOG0266 WD40 repeat-containing protein
Length = 376
Score = 157 bits (398), Expect = 2e-38
Identities = 87/268 (32%), Positives = 158/268 (58%), Gaps = 17/268 (6%)
Query: 29 KISTSCQISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASG 87
K +S + SP G+ + + + ++ + + T HK +N + WS DS+C+ S
Sbjct: 88 KSISSAKFSPCGKYLGTSSADKTVKIWNMDHMICERTLTGHKLGVNDIAWSSDSRCVVSA 147
Query: 88 SEDFTVEITHIIYGRIRR-LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALK 146
S+D T++I I+ R+ + L GH V +N + +++ S S DES++ W V +G +K
Sbjct: 148 SDDKTLKIFEIVTSRMTKTLKGHNNYVFCCNFNPQSSLVVSGSFDESVRIWDVKTGMCIK 207
Query: 147 TMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPI 206
T+ AHSD V ++ + D S+++SGSYDGL+RI+DT +G C+KTL D++ P+
Sbjct: 208 TLPAHSDPVSAVSFNR-DGSLIASGSYDGLVRIWDTANGQCIKTLVDDEN-------PPV 259
Query: 207 STVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGK 266
+ VKFS NGK++L +LD+ +KLW++++G ++ + H+ +K + N + GK
Sbjct: 260 AFVKFSPNGKYILASNLDSTLKLWDFSKGKTLKQYT-GHENSKYCIFANFSV----TGGK 314
Query: 267 DPLVISGNDSGSMCVWNVYSKNLVQKID 294
+ISG++ + +WN+ ++ +VQ ++
Sbjct: 315 --WIISGSEDCKIYIWNLQTREIVQCLE 340
>At3g49660 [R] KOG0266 WD40 repeat-containing protein
Length = 317
Score = 147 bits (371), Expect = 2e-35
Identities = 89/280 (31%), Positives = 157/280 (55%), Gaps = 22/280 (7%)
Query: 22 QVLPASGKISTSCQISPDGELIAICQ-NTDMLVYEISS-----SKMMKLTTTHKECINCL 75
Q L + + +S + S DG L+A + + Y I++ ++ ++ T H+ I+ +
Sbjct: 18 QTLTSHNRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDV 77
Query: 76 CWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESI 134
+S D++ I S S+D T+++ + G I+ L+GHT + +N + N++ S S DE++
Sbjct: 78 AFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETV 137
Query: 135 KEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYD 194
+ W V +G LK + AHSD V ++D + D S++ S SYDGL RI+D+ +GHC+KTL D
Sbjct: 138 RIWDVTTGKCLKVLPAHSDPVTAVDFNR-DGSLIVSSSYDGLCRIWDSGTGHCVKTLIDD 196
Query: 195 KDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKY 254
++ P+S V+FS NGKF+LV +LDN ++LW + ++T+ +Y
Sbjct: 197 EN-------PPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTY-----TGHVNAQY 244
Query: 255 NCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKID 294
GK ++SG++ + +W + SK L+QK++
Sbjct: 245 CISSAFSVTNGK--RIVSGSEDNCVHMWELNSKKLLQKLE 282
Score = 50.8 bits (120), Expect = 3e-06
Identities = 33/109 (30%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 35 QISPDGELIAI--CQNTDMLVYEISSSKMMKLTTTH---KECINCLCWSPDSKCIASGSE 89
+ SP+G+ I + NT + ++ ISS+K +K T H + CI+ + K I SGSE
Sbjct: 205 RFSPNGKFILVGTLDNT-LRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSE 263
Query: 90 DFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSMDESIKEW 137
D V + + ++ ++L GHT V+++ + N++ S S+D++++ W
Sbjct: 264 DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIW 312
>7302720 [R] KOG0266 WD40 repeat-containing protein
Length = 307
Score = 142 bits (357), Expect = 9e-34
Identities = 84/264 (31%), Positives = 148/264 (55%), Gaps = 18/264 (6%)
Query: 32 TSCQISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSED 90
T + S +GE + +L ++++S+++ ++ H + +N + WS + IAS S+D
Sbjct: 60 TGLKFSSNGENLVSSSGDRLLKLWDLSATRCIQSLAGHGDGVNDVAWSA-AGLIASCSDD 118
Query: 91 FTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMS 149
TV + ++ L GH+ S C+N + N+L S+S DE+++ W V +G LK +
Sbjct: 119 MTVRLWDARSKLCVKVLEGHSRYSFSCCFNPQANLLASTSFDETVRLWDVRTGKTLKIVH 178
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
AH D + S+D + D +I + SYDGL+R++D+ +GH LKTL D D +P+ V
Sbjct: 179 AHQDPITSVDFHR-DGNIFVTSSYDGLVRLWDSSTGHVLKTLV-DVD------NIPVGYV 230
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL 269
KFS NG+++L +L+N ++LW Y + +RT+ E + C G
Sbjct: 231 KFSPNGRYILSSTLNNTLRLWNYKKPKCMRTYRGHLNE------FYCSNSNFSTTG-GIW 283
Query: 270 VISGNDSGSMCVWNVYSKNLVQKI 293
++SG++ ++C+WN+ ++ LVQKI
Sbjct: 284 IVSGSEDNTLCIWNLQTRELVQKI 307
>CE06574 [R] KOG0266 WD40 repeat-containing protein
Length = 501
Score = 133 bits (335), Expect = 3e-31
Identities = 79/234 (33%), Positives = 130/234 (54%), Gaps = 16/234 (6%)
Query: 62 MKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNN 120
++ +H+ IN WS +S+ IAS S+D TV+I +I G +R + GHT V +N
Sbjct: 248 LQTLASHQLGINDFSWSSNSQFIASASDDTTVKIFDVISGACLRTMRGHTNYVFCCSFNP 307
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
+ +++ S+ DE+++ W +G +K + AHSD + SI D + +++ SYDG IR++
Sbjct: 308 QSSLIASAGFDETVRVWDFKTGLCVKCIPAHSDPITSISY-NHDGNTMATSSYDGCIRVW 366
Query: 181 DTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRT 240
D SG CLKTL D D P++ V FS NGK+LL LD+ +KLW+ + ++
Sbjct: 367 DAASGSCLKTLV-DTDH------APVTFVCFSPNGKYLLSAQLDSSLKLWDPKKAKPLK- 418
Query: 241 FLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKID 294
+ KY + P GK +ISG++ G + VW++ +K +VQ ++
Sbjct: 419 ----YYNGHKNKKYCLFANMSVPLGKH--IISGSEDGRILVWSIQTKQIVQILE 466
Score = 67.8 bits (164), Expect = 2e-11
Identities = 48/196 (24%), Positives = 88/196 (44%), Gaps = 12/196 (6%)
Query: 48 NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRL 106
+T + ++++ S ++ H + C ++P S IAS D TV + G ++ +
Sbjct: 276 DTTVKIFDVISGACLRTMRGHTNYVFCCSFNPQSSLIASAGFDETVRVWDFKTGLCVKCI 335
Query: 107 MGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSS 166
H+ P+ SI YN+ GN + +SS D I+ W SG+ LKT+ A V+ +
Sbjct: 336 PAHSDPITSISYNHDGNTMATSSYDGCIRVWDAASGSCLKTLVDTDHAPVTFVCFSPNGK 395
Query: 167 ILSSGSYDGLIRIFDTESGHCLKTLTYDKD---WIAEDGVVPISTVKFSRNGKFLLVKSL 223
L S D ++++D + LK K+ + + VP+ GK ++ S
Sbjct: 396 YLLSAQLDSSLKLWDPKKAKPLKYYNGHKNKKYCLFANMSVPL--------GKHIISGSE 447
Query: 224 DNVVKLWEYTRGTVVR 239
D + +W +V+
Sbjct: 448 DGRILVWSIQTKQIVQ 463
>SPBC354.03 [R] KOG0266 WD40 repeat-containing protein
Length = 380
Score = 130 bits (328), Expect = 2e-30
Identities = 87/252 (34%), Positives = 137/252 (53%), Gaps = 17/252 (6%)
Query: 29 KISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTT---HKECINCLCWSPDSKCIA 85
K T +SP+ IA + + +I S+ +L T H I+ + W+ SK +A
Sbjct: 55 KSVTCVSVSPNKRWIATSSSDGTI--KIWSALTFRLECTLFGHYRGISQVKWATGSKYLA 112
Query: 86 SGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTA 144
S S+D T+ I +R L GHT V SI +N G +L S S DE+++ W++ GT
Sbjct: 113 SASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGTC 172
Query: 145 LKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVV 204
L+ + AHS+ ++S+ I D ++ ++ SYDG+ RI+D SG CLKTL E V
Sbjct: 173 LRMLPAHSEPIISVSI-SADGTLCATASYDGMARIWDVLSGQCLKTL-------VEPINV 224
Query: 205 PISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQ 264
P+S ++F+ N K+LLV +L++ ++LW+Y R VVR F H T+ + ++C P+
Sbjct: 225 PLSNLQFTENRKYLLVSNLNSQIRLWDYRRNRVVRIF-DSHVNTRYSMSWDCYSSKNIPK 283
Query: 265 GKDPLVISGNDS 276
+ L NDS
Sbjct: 284 NTEAL--PNNDS 293
>At4g02730 [R] KOG0266 WD40 repeat-containing protein
Length = 333
Score = 125 bits (314), Expect = 8e-29
Identities = 85/278 (30%), Positives = 147/278 (52%), Gaps = 21/278 (7%)
Query: 33 SC-QISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSED 90
SC + S DG L+A + M+++ ++ ++ H I+ L WS DS S S+D
Sbjct: 47 SCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAWSSDSHYTCSASDD 106
Query: 91 FTVEI--THIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM 148
T+ I Y ++ L GHT V + +N N++ S S DE+I+ W V +G ++ +
Sbjct: 107 CTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMI 166
Query: 149 SAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPIST 208
AHS + S+ + D S++ S S+DG +I+D + G CLKTL DK +S
Sbjct: 167 KAHSMPISSVHFNR-DGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS-------PAVSF 218
Query: 209 VKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDP 268
KFS NGKF+LV +LD+ +KL Y G ++ + T K C + +
Sbjct: 219 AKFSPNGKFILVATLDSTLKLSNYATGKFLKVY------TGHTNKVFC-ITSAFSVTNGK 271
Query: 269 LVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISIS 306
++SG++ + +W++ ++N++Q++ E H ++ +IS+S
Sbjct: 272 YIVSGSEDNCVYLWDLQARNILQRL-EGHTDA-VISVS 307
>CE11748 [R] KOG0266 WD40 repeat-containing protein
Length = 395
Score = 121 bits (303), Expect = 2e-27
Identities = 76/274 (27%), Positives = 137/274 (49%), Gaps = 57/274 (20%)
Query: 63 KLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIY---------------------- 100
++ HK+ I+ + +SPD + + SGS D +++I + +
Sbjct: 101 EIPNAHKKSISGIKFSPDGRYMGSGSADCSIKIWRMDFVYEKTLMGHRLGINEFSWSSDS 160
Query: 101 -------------------GR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVL 140
GR ++ L GHT V C+N G ++ S S DE+I+ W
Sbjct: 161 KLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWCAR 220
Query: 141 SGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAE 200
+G + ++ H D V S+ + D + L+SGSYDG++RI+D+ +G C+KTL +
Sbjct: 221 NGNTIFSIPGHEDPVSSVCFNR-DGAYLASGSYDGIVRIWDSTTGTCVKTL-------ID 272
Query: 201 DGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLEL 260
+ PI+ VKFS NGK++L +L+N +KLW+Y + V++ + H+ + KY
Sbjct: 273 EEHPPITHVKFSPNGKYILASNLNNTLKLWDYQKLRVLKEYT-GHENS----KYCVAANF 327
Query: 261 IYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKID 294
GK ++SG++ + +WN+ ++ ++Q +D
Sbjct: 328 SVTGGK--WIVSGSEDHKVYIWNLQTREILQTLD 359
Score = 76.6 bits (187), Expect = 4e-14
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 9/207 (4%)
Query: 37 SPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
S D +LI C + ++ V+++SS + +K H + C C++P IASGS D T+ I
Sbjct: 157 SSDSKLIVSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRI 216
Query: 96 THIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM-SAHSD 153
G I + GH PV S+C+N G L S S D ++ W +GT +KT+
Sbjct: 217 WCARNGNTIFSIPGHEDPVSSVCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHP 276
Query: 154 AVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSR 213
+ + IL+S + + ++++D + LK T E+ ++
Sbjct: 277 PITHVKFSPNGKYILAS-NLNNTLKLWDYQKLRVLKEYTGH-----ENSKYCVAANFSVT 330
Query: 214 NGKFLLVKSLDNVVKLWEYTRGTVVRT 240
GK+++ S D+ V +W +++T
Sbjct: 331 GGKWIVSGSEDHKVYIWNLQTREILQT 357
>SPAC630.14c [R] KOG0266 WD40 repeat-containing protein
Length = 586
Score = 89.4 bits (220), Expect = 7e-18
Identities = 79/307 (25%), Positives = 143/307 (45%), Gaps = 42/307 (13%)
Query: 22 QVLPASGKISTSCQI--SPDGELIAICQNTDMLVYEISSSKMMKLTTTHKE------CIN 73
Q+L S C + S DG+ +A N +V+ + + K++ L +
Sbjct: 279 QLLHTLEHTSVICYVRFSADGKFLATGCNRAAMVFNVETGKLITLLQEESSKREGDLYVR 338
Query: 74 CLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM-GHTAPVISICYNNKGNILCSSSMDE 132
+ +SPD K +A+G ED + I I R+ RL+ GH + S+ ++ G L S S D
Sbjct: 339 SVAFSPDGKYLATGVEDQQIRIWDIAQKRVYRLLTGHEQEIYSLDFSKDGKTLVSGSGDR 398
Query: 133 SIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLT 192
++ W V +G + + H+D V+ + D +++GS D +IRI+ T SG ++ L
Sbjct: 399 TVCLWDVEAGE--QKLILHTDDGVTTVMFSPDGQFIAAGSLDKVIRIW-TSSGTLVEQLH 455
Query: 193 YDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE-----------YTRGTVVRTF 241
++ + +V FS +GK+L+ SLDN +KLWE Y G + +
Sbjct: 456 GHEE--------SVYSVAFSPDGKYLVSGSLDNTIKLWELQCVSNVAPSMYKEGGICKQT 507
Query: 242 LWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSP 301
H++ + + P GK +ISG+ ++ W+ S + ++ + N+
Sbjct: 508 FTGHKDFILSV-------TVSPDGK--WIISGSKDRTIQFWSPDSPH--SQLTLQGHNNS 556
Query: 302 LISISAS 308
+IS++ S
Sbjct: 557 VISVAVS 563
Score = 56.2 bits (134), Expect = 6e-08
Identities = 43/165 (26%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Query: 32 TSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDF 91
T+ SPDG+ IA ++ SS +++ H+E + + +SPD K + SGS D
Sbjct: 421 TTVMFSPDGQFIAAGSLDKVIRIWTSSGTLVEQLHGHEESVYSVAFSPDGKYLVSGSLDN 480
Query: 92 TVEITHI---------IY--GRI--RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWH 138
T+++ + +Y G I + GH ++S+ + G + S S D +I+ W
Sbjct: 481 TIKLWELQCVSNVAPSMYKEGGICKQTFTGHKDFILSVTVSPDGKWIISGSKDRTIQFWS 540
Query: 139 VLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTE 183
S + T+ H+++V+S+ + + ++GS D RI+ E
Sbjct: 541 PDSPHSQLTLQGHNNSVISVAVSP-NGHCFATGSGDLRARIWSYE 584
>YCR084c [R] KOG0266 WD40 repeat-containing protein
Length = 713
Score = 84.3 bits (207), Expect = 2e-16
Identities = 63/241 (26%), Positives = 120/241 (49%), Gaps = 9/241 (3%)
Query: 72 INCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM-GHTAPVISICYNNKGNILCSSSM 130
I +C+SPD K +A+G+ED + I I +I ++ GH + S+ Y G+ L S S
Sbjct: 446 IRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSG 505
Query: 131 DESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKT 190
D +++ W + +G T+S D V ++ + D +++GS D +R++D+E+G ++
Sbjct: 506 DRTVRIWDLRTGQCSLTLSIE-DGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVER 564
Query: 191 LTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKA 250
L + + + +V F+R+G+ ++ SLD VKLW P+ T
Sbjct: 565 LDSENE-SGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT-C 622
Query: 251 KLKYNCGLELIYPQG---KDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISA 307
++ Y + + D ++SG+ + W+ S N + + + HRNS +IS++
Sbjct: 623 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLML-QGHRNS-VISVAV 680
Query: 308 S 308
+
Sbjct: 681 A 681
>Hs16117781 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 707
Score = 84.3 bits (207), Expect = 2e-16
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 38/259 (14%)
Query: 47 QNTDMLVYEISSSKMMKLTTTHK-ECINCL--------CWSPDSKCIASGSEDFTVEITH 97
Q D ++ S+ + +K+ ECI+ L C K + SGS D T+ +
Sbjct: 428 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 487
Query: 98 IIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVV 156
I G+ + LMGH A V + Y+ G + S + D +K W + T L T+ H++ V
Sbjct: 488 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 545
Query: 157 SIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGK 216
S+ +FD + SGS D IR++D E+G+C+ TLT + T
Sbjct: 546 SL---QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----------LTSGMELKDN 592
Query: 217 FLLVKSLDNVVKLWEYTRGTVVRTFLWP--HQETKAKLKYNCGLELIYPQGKDPLVISGN 274
L+ + D+ VK+W+ G ++T P HQ L++N VI+ +
Sbjct: 593 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN-----------KNFVITSS 641
Query: 275 DSGSMCVWNVYSKNLVQKI 293
D G++ +W++ + ++ +
Sbjct: 642 DDGTVKLWDLKTGEFIRNL 660
Score = 77.4 bits (189), Expect = 3e-14
Identities = 79/304 (25%), Positives = 139/304 (44%), Gaps = 57/304 (18%)
Query: 55 EISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPV 113
E+ S K++K H I CL + + I SGS+D T+++ + G+ +R L+GHT V
Sbjct: 369 ELKSPKVLKGHDDH--VITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 424
Query: 114 ISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSY 173
S + NI+ S S D ++K W+ +G + T+ H+ V + + + + SGS
Sbjct: 425 WSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSR 479
Query: 174 DGLIRIFDTESGHCLKTL--------------------TYD---KDWIAEDGVVPISTVK 210
D +R++D E+G CL L YD K W E + T++
Sbjct: 480 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC-LHTLQ 538
Query: 211 FSRN--------GKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIY 262
N G ++ SLD +++W+ G + T L HQ + G+EL
Sbjct: 539 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTS------GMEL-- 589
Query: 263 PQGKDPLVISGNDSGSMCVWNVYSKNLVQKID--EKHRNSPLISISASYDKVATLSLNGE 320
KD +++SGN ++ +W++ + +Q + KH+ S + + + + V T S +G
Sbjct: 590 ---KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ-SAVTCLQFNKNFVITSSDDGT 645
Query: 321 CNLF 324
L+
Sbjct: 646 VKLW 649
Score = 77.0 bits (188), Expect = 3e-14
Identities = 51/210 (24%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C + +++ ++ + V++I + + + + H + C+ + D + + SG+ DF V
Sbjct: 466 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 523
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
++ + L GHT V S+ ++ G + S S+D SI+ W V +G + T++ H
Sbjct: 524 KVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 581
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFS 212
+++ +IL SG+ D ++I+D ++G CL+TL + ++ ++F+
Sbjct: 582 SLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA-----VTCLQFN 633
Query: 213 RNGKFLLVKSLDNVVKLWEYTRGTVVRTFL 242
+N F++ S D VKLW+ G +R +
Sbjct: 634 KN--FVITSSDDGTVKLWDLKTGEFIRNLV 661
>Hs16117779 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 627
Score = 84.3 bits (207), Expect = 2e-16
Identities = 68/259 (26%), Positives = 118/259 (45%), Gaps = 38/259 (14%)
Query: 47 QNTDMLVYEISSSKMMKLTTTHK-ECINCL--------CWSPDSKCIASGSEDFTVEITH 97
Q D ++ S+ + +K+ ECI+ L C K + SGS D T+ +
Sbjct: 348 QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWD 407
Query: 98 IIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVV 156
I G+ + LMGH A V + Y+ G + S + D +K W + T L T+ H++ V
Sbjct: 408 IETGQCLHVLMGHVAAVRCVQYD--GRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVY 465
Query: 157 SIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGK 216
S+ +FD + SGS D IR++D E+G+C+ TLT + T
Sbjct: 466 SL---QFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS----------LTSGMELKDN 512
Query: 217 FLLVKSLDNVVKLWEYTRGTVVRTFLWP--HQETKAKLKYNCGLELIYPQGKDPLVISGN 274
L+ + D+ VK+W+ G ++T P HQ L++N VI+ +
Sbjct: 513 ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN-----------KNFVITSS 561
Query: 275 DSGSMCVWNVYSKNLVQKI 293
D G++ +W++ + ++ +
Sbjct: 562 DDGTVKLWDLKTGEFIRNL 580
Score = 77.4 bits (189), Expect = 3e-14
Identities = 79/304 (25%), Positives = 139/304 (44%), Gaps = 57/304 (18%)
Query: 55 EISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPV 113
E+ S K++K H I CL + + I SGS+D T+++ + G+ +R L+GHT V
Sbjct: 289 ELKSPKVLKGHDDH--VITCLQFCGNR--IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGV 344
Query: 114 ISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSY 173
S + NI+ S S D ++K W+ +G + T+ H+ V + + + + SGS
Sbjct: 345 WSS--QMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHE---KRVVSGSR 399
Query: 174 DGLIRIFDTESGHCLKTL--------------------TYD---KDWIAEDGVVPISTVK 210
D +R++D E+G CL L YD K W E + T++
Sbjct: 400 DATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETC-LHTLQ 458
Query: 211 FSRN--------GKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIY 262
N G ++ SLD +++W+ G + T L HQ + G+EL
Sbjct: 459 GHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHT-LTGHQSLTS------GMEL-- 509
Query: 263 PQGKDPLVISGNDSGSMCVWNVYSKNLVQKID--EKHRNSPLISISASYDKVATLSLNGE 320
KD +++SGN ++ +W++ + +Q + KH+ S + + + + V T S +G
Sbjct: 510 ---KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQ-SAVTCLQFNKNFVITSSDDGT 565
Query: 321 CNLF 324
L+
Sbjct: 566 VKLW 569
Score = 77.0 bits (188), Expect = 3e-14
Identities = 51/210 (24%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C + +++ ++ + V++I + + + + H + C+ + D + + SG+ DF V
Sbjct: 386 CMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMV 443
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
++ + L GHT V S+ ++ G + S S+D SI+ W V +G + T++ H
Sbjct: 444 KVWDPETETCLHTLQGHTNRVYSLQFD--GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQ 501
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFS 212
+++ +IL SG+ D ++I+D ++G CL+TL + ++ ++F+
Sbjct: 502 SLTSGMELK---DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA-----VTCLQFN 553
Query: 213 RNGKFLLVKSLDNVVKLWEYTRGTVVRTFL 242
+N F++ S D VKLW+ G +R +
Sbjct: 554 KN--FVITSSDDGTVKLWDLKTGEFIRNLV 581
>SPBC713.04c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 854
Score = 84.0 bits (206), Expect = 3e-16
Identities = 67/264 (25%), Positives = 123/264 (46%), Gaps = 24/264 (9%)
Query: 36 ISPDGELIAICQNT--DMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
++ G+ IAI + +LV+E S + +H + ++ L +S D + I +G++D +
Sbjct: 304 VNSTGDWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGADDGKI 363
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
++ + G I HT+ V +C++ +GN+L SSS+D S++ W ++ +T +A S
Sbjct: 364 KVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPS 423
Query: 153 DAVVSIDIPKFDSSILSSGSYDGL-IRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKF 211
S I+ +GS D I ++ ++G L+TL +G P+S++ F
Sbjct: 424 RVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLLETLA------GHEG--PVSSLSF 475
Query: 212 SRNGKFLLVKSLDNVVKLWE-YTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLV 270
+ +G L S D V++W+ ++R +V P +P GK+ V
Sbjct: 476 NSSGSLLASGSWDKTVRIWDIFSRSGIVEPLPIPSDVLSL---------AFHPDGKEVCV 526
Query: 271 ISGNDSGSMCVWNVYSKNLVQKID 294
S + G + WNV ID
Sbjct: 527 ASLD--GQLTFWNVQEGKQTSLID 548
Score = 69.3 bits (168), Expect = 7e-12
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 21/212 (9%)
Query: 32 TSCQISPDGE-LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSED 90
++ Q S DG+ +I + + V++++S + T H ++ LC+S + S S D
Sbjct: 343 STLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTSAVSGLCFSKRGNVLFSSSLD 402
Query: 91 FTVEITHIIYGRIRRLMGHTAP----VISICYNNKGNILCSSSMDE-SIKEWHVLSGTAL 145
+V +I R R TAP I + G I+C+ S D I W V +G L
Sbjct: 403 GSVRAWDLI--RYRNFRTFTAPSRVQFSCIAVDPSGEIVCAGSQDSFEIFMWSVQTGQLL 460
Query: 146 KTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP 205
+T++ H V S+ S+L+SGS+D +RI+D + + I E +P
Sbjct: 461 ETLAGHEGPVSSLSF-NSSGSLLASGSWDKTVRIWD----------IFSRSGIVEPLPIP 509
Query: 206 --ISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
+ ++ F +GK + V SLD + W G
Sbjct: 510 SDVLSLAFHPDGKEVCVASLDGQLTFWNVQEG 541
>SPBC713.05 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 297
Score = 80.5 bits (197), Expect = 3e-15
Identities = 55/215 (25%), Positives = 110/215 (50%), Gaps = 26/215 (12%)
Query: 80 DSKCIASGSEDFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWH 138
DS AS D +++ + G++ RRL GH A + +I YN +IL S S D ++ W
Sbjct: 67 DSTKFASCGGDKFIQVWDVNTGKVDRRLGGHLAQINTIRYNEDSSILASGSFDSKVRLWD 126
Query: 139 VLSG--TALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
S + ++ ++ D+V SIDI + ++ +GS DG +R +D G T D
Sbjct: 127 CRSNSFSPIQVLADAKDSVSSIDIAE---HLIVTGSTDGTLRTYDIRKG------TLSSD 177
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFL-WPHQETKAKLKYN 255
+ + PI++VK S++ F L+ SL++ + L + G ++++++ + E + + +N
Sbjct: 178 YFSH----PITSVKTSKSASFSLISSLNSSIHLLDQETGKILKSYIGLKNMEYRVRSSFN 233
Query: 256 CGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLV 290
+ +V SG++ G + +W++ ++ +
Sbjct: 234 ---------QSETIVFSGSEDGKVYLWDLENETQI 259
>7292465 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 1326
Score = 80.5 bits (197), Expect = 3e-15
Identities = 65/256 (25%), Positives = 119/256 (46%), Gaps = 33/256 (12%)
Query: 43 IAICQNTD--MLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIY 100
I I +TD + V+++ S + H + C+ + SGS D T+ + I
Sbjct: 1047 IIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSK--VVSGSRDATLRVWDIEQ 1104
Query: 101 GR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID 159
G + L+GH A V + Y+ G ++ S + D +K WH L T+ H++ V S+
Sbjct: 1105 GSCLHVLVGHLAAVRCVQYD--GKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSL- 1161
Query: 160 IPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLL 219
+FD + SGS D IR++D E+G+C TL + S ++ +N L+
Sbjct: 1162 --QFDGLHVVSGSLDTSIRVWDVETGNCKHTLMGHQSL--------TSGMELRQN--ILV 1209
Query: 220 VKSLDNVVKLWEYTRGTVVRTFLWP--HQETKAKLKYNCGLELIYPQGKDPLVISGNDSG 277
+ D+ VK+W+ T G ++T P H L++N V++ +D G
Sbjct: 1210 SGNADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN-----------SRFVVTSSDDG 1258
Query: 278 SMCVWNVYSKNLVQKI 293
++ +W+V + + ++ +
Sbjct: 1259 TVKLWDVKTGDFIRNL 1274
Score = 78.6 bits (192), Expect = 1e-14
Identities = 53/210 (25%), Positives = 103/210 (48%), Gaps = 15/210 (7%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C ++++ ++ + V++I + + H + C+ + D K I SG+ D+ V
Sbjct: 1080 CMHLHGSKVVSGSRDATLRVWDIEQGSCLHVLVGHLAAVRCVQY--DGKLIVSGAYDYMV 1137
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+I H + L GHT V S+ ++ G + S S+D SI+ W V +G T+ H
Sbjct: 1138 KIWHPERQECLHTLQGHTNRVYSLQFD--GLHVVSGSLDTSIRVWDVETGNCKHTLMGHQ 1195
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFS 212
+++ + +IL SG+ D ++++D +G CL+TL+ + ++ ++F
Sbjct: 1196 SLTSGMELRQ---NILVSGNADSTVKVWDITTGQCLQTLSGPNKHHSA-----VTCLQF- 1246
Query: 213 RNGKFLLVKSLDNVVKLWEYTRGTVVRTFL 242
N +F++ S D VKLW+ G +R +
Sbjct: 1247 -NSRFVVTSSDDGTVKLWDVKTGDFIRNLV 1275
Score = 76.3 bits (186), Expect = 6e-14
Identities = 78/288 (27%), Positives = 128/288 (44%), Gaps = 53/288 (18%)
Query: 72 INCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSM 130
I CL +S + I SGS+D T+++ + G+ +R L+GHT V S GNI+ S S
Sbjct: 998 ITCLQFSGNR--IVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWSS--QMSGNIIISGST 1053
Query: 131 DESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKT 190
D ++K W + SG + T+ H+ V + + S + SGS D +R++D E G CL
Sbjct: 1054 DRTLKVWDMDSGACVHTLQGHTSTVRCMHL---HGSKVVSGSRDATLRVWDIEQGSCLHV 1110
Query: 191 LT----------YDKDWI---AEDGVVPI-----------------STVKFSRNGKFLLV 220
L YD I A D +V I +G ++
Sbjct: 1111 LVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHTLQGHTNRVYSLQFDGLHVVS 1170
Query: 221 KSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMC 280
SLD +++W+ G T L HQ + G+EL + +++SGN ++
Sbjct: 1171 GSLDTSIRVWDVETGNCKHT-LMGHQSLTS------GMEL-----RQNILVSGNADSTVK 1218
Query: 281 VWNVYSKNLVQKID--EKHRNSPLISISASYDKVATLSLNGECNLFRV 326
VW++ + +Q + KH +S + + + V T S +G L+ V
Sbjct: 1219 VWDITTGQCLQTLSGPNKH-HSAVTCLQFNSRFVVTSSDDGTVKLWDV 1265
Score = 57.8 bits (138), Expect = 2e-08
Identities = 57/213 (26%), Positives = 95/213 (43%), Gaps = 46/213 (21%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GH VI+ C GN + S S D ++K W ++G L+T+ H+ V S +
Sbjct: 990 LKGHDDHVIT-CLQFSGNRIVSGSDDNTLKVWSAVNGKCLRTLVGHTGGVWS---SQMSG 1045
Query: 166 SILSSGSYDGLIRIFDTESGHCLKTL------------------TYDKD-----WIAEDG 202
+I+ SGS D ++++D +SG C+ TL + +D W E G
Sbjct: 1046 NIIISGSTDRTLKVWDMDSGACVHTLQGHTSTVRCMHLHGSKVVSGSRDATLRVWDIEQG 1105
Query: 203 ------VVPISTVK-FSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYN 255
V ++ V+ +GK ++ + D +VK+W R + T L H L+++
Sbjct: 1106 SCLHVLVGHLAAVRCVQYDGKLIVSGAYDYMVKIWHPERQECLHT-LQGHTNRVYSLQFD 1164
Query: 256 CGLELIYPQGKDPLVISGNDSGSMCVWNVYSKN 288
GL V+SG+ S+ VW+V + N
Sbjct: 1165 -GLH----------VVSGSLDTSIRVWDVETGN 1186
>Hs4557741 [S] KOG0295 WD40 repeat-containing protein
Length = 410
Score = 79.0 bits (193), Expect = 9e-15
Identities = 56/228 (24%), Positives = 103/228 (44%), Gaps = 20/228 (8%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRR-LMGHTAPVISICYNNKGNILC 126
H+ + + + P + S SED T+++ G R L GHT V I +++ G +L
Sbjct: 107 HRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLA 166
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGH 186
S S D +IK W ++TM H V S+ I I+S+ S D I++++ ++G+
Sbjct: 167 SCSADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSA-SRDKTIKMWEVQTGY 225
Query: 187 CLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYT----------RGT 236
C+KT T ++W + V+ +++G + S D V++W
Sbjct: 226 CVKTFTGHREW--------VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEH 277
Query: 237 VVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNV 284
VV W + + + + G E P ++SG+ ++ +W+V
Sbjct: 278 VVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDV 325
Score = 72.0 bits (175), Expect = 1e-12
Identities = 56/213 (26%), Positives = 104/213 (48%), Gaps = 27/213 (12%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GH +PV + ++ +++ S+S D +IK W +G +T+ H+D+V I FD
Sbjct: 104 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDI---SFDH 160
Query: 166 S--ILSSGSYDGLIRIFDTESGHCLKTL-TYDKDWIAEDGVVPISTVKFSRNGKFLLVKS 222
S +L+S S D I+++D + C++T+ +D + +S+V NG ++ S
Sbjct: 161 SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHN---------VSSVAIMPNGDHIVSAS 211
Query: 223 LDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVW 282
D +K+WE G V+TF H+E + ++ P L+ S ++ ++ VW
Sbjct: 212 RDKTIKMWEVQTGYCVKTFT-GHRE---------WVRMVRPNQDGTLIASCSNDQTVRVW 261
Query: 283 NVYSKNLVQKIDEKHRNSPLISIS--ASYDKVA 313
V +K ++ E IS + +SY ++
Sbjct: 262 VVATKECKAELREHEHVVECISWAPESSYSSIS 294
Score = 67.0 bits (162), Expect = 4e-11
Identities = 60/265 (22%), Positives = 112/265 (41%), Gaps = 41/265 (15%)
Query: 40 GELIAICQNTDMLV--YEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITH 97
G+L+A C + DM + ++ + ++ H ++ + P+ I S S D T+++
Sbjct: 162 GKLLASC-SADMTIKLWDFQGFECIRTMHGHDHNVSSVAIMPNGDHIVSASRDKTIKMWE 220
Query: 98 IIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVV 156
+ G ++ GH V + N G ++ S S D++++ W V + + H V
Sbjct: 221 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHEHVVE 280
Query: 157 SID-IPKFDSSILS------------------SGSYDGLIRIFDTESGHCLKTLTYDKDW 197
I P+ S +S SGS D I+++D +G CL TL +W
Sbjct: 281 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340
Query: 198 IAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCG 257
+ V F GKF+L + D +++W+Y ++T L H+ L ++
Sbjct: 341 --------VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKT-LNAHEHFVTSLDFH-- 389
Query: 258 LELIYPQGKDPLVISGNDSGSMCVW 282
P V++G+ ++ VW
Sbjct: 390 -------KTAPYVVTGSVDQTVKVW 407
Score = 65.1 bits (157), Expect = 1e-10
Identities = 47/194 (24%), Positives = 82/194 (42%), Gaps = 31/194 (15%)
Query: 39 DGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITH 97
DG LIA C N + V+ +++ + H+ + C+ W+P+S
Sbjct: 245 DGTLIASCSNDQTVRVWVVATKECKAELREHEHVVECISWAPESS--------------- 289
Query: 98 IIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVS 157
Y I G G L S S D++IK W V +G L T+ H + V
Sbjct: 290 --YSSISEATGSETKKSG----KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRG 343
Query: 158 IDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKF 217
+ ILS D +R++D ++ C+KTL + ++ +++ F + +
Sbjct: 344 VLFHSGGKFILSCAD-DKTLRVWDYKNKRCMKTLNAHEHFV--------TSLDFHKTAPY 394
Query: 218 LLVKSLDNVVKLWE 231
++ S+D VK+WE
Sbjct: 395 VVTGSVDQTVKVWE 408
>At1g73720 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 522
Score = 78.6 bits (192), Expect = 1e-14
Identities = 58/220 (26%), Positives = 96/220 (43%), Gaps = 22/220 (10%)
Query: 38 PDGELIAICQNTDMLVYEISSSKMMKLTTT----HKECINCLCWSPDSKCIASGSEDFTV 93
P G + + T + ++ + LT T K C +SPD + +AS S D +
Sbjct: 189 PPGTQFDLFRGTAAMKQDVEDTHPNVLTHTIKFGKKSHAECARFSPDGQFLASSSVDGFI 248
Query: 94 EITHIIYGRIRR---------LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTA 144
E+ I G++++ M H PV+ I ++ +L S S D IK W + +G
Sbjct: 249 EVWDYISGKLKKDLQYQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVC 308
Query: 145 LKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVV 204
++ AHS V S+ + D S L S S+D RI +SG LK +
Sbjct: 309 IRRFDAHSQGVTSLSFSR-DGSQLLSTSFDQTARIHGLKSGKLLKEFRGHTSY------- 360
Query: 205 PISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWP 244
++ F+ +G ++ S D VK+W+ ++TF P
Sbjct: 361 -VNHAIFTSDGSRIITASSDCTVKVWDSKTTDCLQTFKPP 399
>Hs7657439 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 589
Score = 78.2 bits (191), Expect = 2e-14
Identities = 38/127 (29%), Positives = 70/127 (54%), Gaps = 2/127 (1%)
Query: 62 MKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNN 120
+++ H ++C+ + P+S +A+GS D TV + G +R GH PV+S+ ++
Sbjct: 419 LRIYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLSLAFSP 478
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
G L S+ D+ +K W + SGT K + H+D + S+ DS +++S S D +R++
Sbjct: 479 NGKYLASAGEDQRLKLWDLASGTLYKELRGHTDNITSLTFSP-DSGLIASASMDNSVRVW 537
Query: 181 DTESGHC 187
D + +C
Sbjct: 538 DIRNTYC 544
Score = 55.8 bits (133), Expect = 8e-08
Identities = 51/226 (22%), Positives = 95/226 (41%), Gaps = 24/226 (10%)
Query: 62 MKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI-IYGRIRRLMGHTAPVISICYNN 120
MK+ H + + DS + S SED ++ + + GH PV + +
Sbjct: 335 MKILRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDLGSFTNTVLYQGHAYPVWDLDISP 394
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF--DSSILSSGSYDGLIR 178
S S D + + W L+ + H + +D KF +S+ L++GS D +R
Sbjct: 395 YSLYFASGSHDRTARLWSFDRTYPLRIYAGH---LADVDCVKFHPNSNYLATGSTDKTVR 451
Query: 179 IFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
++ + G+ ++ T + P+ ++ FS NGK+L D +KLW+ GT+
Sbjct: 452 LWSAQQGNSVRLFTGHRG--------PVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLY 503
Query: 239 RTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNV 284
+ L H + L ++ L+ S + S+ VW++
Sbjct: 504 KE-LRGHTDNITSLTFS---------PDSGLIASASMDNSVRVWDI 539
Score = 49.7 bits (117), Expect = 6e-06
Identities = 23/88 (26%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI-RRLMGHTA 111
++ ++L T H+ + L +SP+ K +AS ED +++ + G + + L GHT
Sbjct: 452 LWSAQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQRLKLWDLASGTLYKELRGHTD 511
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHV 139
+ S+ ++ ++ S+SMD S++ W +
Sbjct: 512 NITSLTFSPDSGLIASASMDNSVRVWDI 539
>CE15742 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 510
Score = 78.2 bits (191), Expect = 2e-14
Identities = 62/241 (25%), Positives = 112/241 (45%), Gaps = 27/241 (11%)
Query: 54 YEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRR-------- 105
Y ++ +K +T K +SPD+ + SGS+D +E+ + + G++R+
Sbjct: 201 YPTMMARSIKFST--KSYPESAVFSPDANYLVSGSKDGFIEVWNYMNGKLRKDLKYQAQD 258
Query: 106 -LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMS-AHSDAVVSIDIPKF 163
LM A V I ++ +L + S+D IK W V +G L+ AH+ V ++ K
Sbjct: 259 NLMMMDAAVRCISFSRDSEMLATGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKD 318
Query: 164 DSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSL 223
+S ILS G+ D ++R+ +SG CLK + +I + V++S G ++ S
Sbjct: 319 NSHILSGGN-DHVVRVHGMKSGKCLKEMRGHSSYITD--------VRYSDEGNHIISCST 369
Query: 224 DNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWN 283
D +++W G + TF ++ Y + P+ P +I N S ++ V N
Sbjct: 370 DGSIRVWHGKSGECLSTFRVGSED------YPILNVIPIPKSDPPQMIVCNRSNTLYVVN 423
Query: 284 V 284
+
Sbjct: 424 I 424
Score = 54.3 bits (129), Expect = 2e-07
Identities = 43/166 (25%), Positives = 77/166 (45%), Gaps = 23/166 (13%)
Query: 61 MMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYN 119
+ + H + + + +S D+ I SG D V + + G+ ++ + GH++ + + Y+
Sbjct: 299 LRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMKSGKCLKEMRGHSSYITDVRYS 358
Query: 120 NKGNILCSSSMDESIKEWHVLSGTALKTMSAHSD---AVVSIDIPKFDSSILSSGSYDGL 176
++GN + S S D SI+ WH SG L T S+ + I IPK D + +
Sbjct: 359 DEGNHIISCSTDGSIRVWHGKSGECLSTFRVGSEDYPILNVIPIPKSDPPQMIVCNRSNT 418
Query: 177 IRIFDTESGHCLKTLTYDK---------------DW---IAEDGVV 204
+ + + SG ++T+T K +W IAEDGV+
Sbjct: 419 LYVVNI-SGQVVRTMTSGKREKGDFINCILSPKGEWAYAIAEDGVM 463
Score = 49.3 bits (116), Expect = 8e-06
Identities = 42/169 (24%), Positives = 74/169 (42%), Gaps = 10/169 (5%)
Query: 164 DSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVV----PISTVKFSRNGKFLL 219
D++ L SGS DG I +++ +G K L Y A+D ++ + + FSR+ + L
Sbjct: 225 DANYLVSGSKDGFIEVWNYMNGKLRKDLKYQ----AQDNLMMMDAAVRCISFSRDSEMLA 280
Query: 220 VKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLV-ISGNDSGS 278
S+D +K+W+ G +R F H + ++++ I G D +V + G SG
Sbjct: 281 TGSIDGKIKVWKVETGDCLRRFDRAHTKGVCAVRFSKDNSHILSGGNDHVVRVHGMKSGK 340
Query: 279 MCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGEC-NLFRV 326
+ + + + +IS S +GEC + FRV
Sbjct: 341 CLKEMRGHSSYITDVRYSDEGNHIISCSTDGSIRVWHGKSGECLSTFRV 389
>SPAC227.12 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 462
Score = 77.4 bits (189), Expect = 3e-14
Identities = 58/223 (26%), Positives = 104/223 (46%), Gaps = 20/223 (8%)
Query: 74 CLCWSPDSK--CIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSM 130
C W DS+ +A+G+ D TV + + RL GH A V + ++ G+ L S+S
Sbjct: 226 CQAWDADSEQLTLATGAADNTVCLWKASQSTPLLRLEGHLARVGRVAFHPSGDYLVSASF 285
Query: 131 DESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKT 190
D + + W V +G L HS+ + SI D S++SSG D + RI+D SG +
Sbjct: 286 DTTWRLWDVHTGVELLMQEGHSEGIFSIACQP-DGSLVSSGGNDAIGRIWDLRSGKSIMV 344
Query: 191 LTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKA 250
L ++ + I + +S NG L S D+ VK+W+ + ++ T + H +
Sbjct: 345 L--------DEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHT-IPAHSSLVS 395
Query: 251 KLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKI 293
++Y G + + + G + +WN + +L++ +
Sbjct: 396 DVRY-------IESGVNRFIATSGYDGCVKLWNPLNCSLIKSM 431
Score = 58.9 bits (141), Expect = 1e-08
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 9/159 (5%)
Query: 26 ASGKISTSCQISPDGELIAICQNTDM-LVYEISSSKMMKLTTTHKECINCLCWSPDSKCI 84
+ G S +CQ PDG L++ N + ++++ S K + + H I + WSP+ +
Sbjct: 307 SEGIFSIACQ--PDGSLVSSGGNDAIGRIWDLRSGKSIMVLDEHIRQIVAMAWSPNGYQL 364
Query: 85 ASGSEDFTVEITHI-IYGRIRRLMGHTAPVISICYNNKG--NILCSSSMDESIKEWHVLS 141
A+ S D TV+I + + H++ V + Y G + +S D +K W+ L+
Sbjct: 365 ATSSADDTVKIWDLRKVSLAHTIPAHSSLVSDVRYIESGVNRFIATSGYDGCVKLWNPLN 424
Query: 142 GTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
+ +K+M H + V+S+D + +SSG YD I+++
Sbjct: 425 CSLIKSMVGHEEKVMSVD--GYGDRFISSG-YDRTIKLW 460
Score = 56.2 bits (134), Expect = 6e-08
Identities = 42/199 (21%), Positives = 93/199 (46%), Gaps = 19/199 (9%)
Query: 38 PDGE-LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEIT 96
P G+ L++ +T ++++ + + + H E I + PD ++SG D I
Sbjct: 275 PSGDYLVSASFDTTWRLWDVHTGVELLMQEGHSEGIFSIACQPDGSLVSSGGNDAIGRIW 334
Query: 97 HIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
+ G+ I L H ++++ ++ G L +SS D+++K W + + T+ AHS V
Sbjct: 335 DLRSGKSIMVLDEHIRQIVAMAWSPNGYQLATSSADDTVKIWDLRKVSLAHTIPAHSSLV 394
Query: 156 VSIDIPKFDSSI---LSSGSYDGLIRIFDTESGHCLKTLT-YDKDWIAEDGVVPISTVKF 211
D+ +S + +++ YDG +++++ + +K++ +++ ++ DG
Sbjct: 395 --SDVRYIESGVNRFIATSGYDGCVKLWNPLNCSLIKSMVGHEEKVMSVDGY-------- 444
Query: 212 SRNGKFLLVKSLDNVVKLW 230
G + D +KLW
Sbjct: 445 ---GDRFISSGYDRTIKLW 460
>CE27762 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 585
Score = 77.4 bits (189), Expect = 3e-14
Identities = 55/207 (26%), Positives = 94/207 (44%), Gaps = 12/207 (5%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C L+ ++T + V+++ S + + H + C+ + D + SG DFTV
Sbjct: 341 CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTV 398
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+I + GR IR L GH V S+ + ++ +I+CS S+D SI+ W + ++
Sbjct: 399 KIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 458
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFS 212
+ +IL S + D +R++D G C+ L+ + I S F
Sbjct: 459 GHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAIT-------SLQWFG 511
Query: 213 RNGKFLLVKSLDNVVKLWEYTRGTVVR 239
RN + S D VKLW+ RG ++R
Sbjct: 512 RN--MVATSSDDGTVKLWDIERGALIR 536
Score = 66.2 bits (160), Expect = 6e-11
Identities = 56/209 (26%), Positives = 93/209 (43%), Gaps = 24/209 (11%)
Query: 76 CWSPDSKCIASGSEDFTVEITHIIYGRIR-RLMGHTAPVISICYNNKGNILCSSSMDESI 134
C + +GS+D T+++ I G + L+GHT V + + G + S S D ++
Sbjct: 259 CMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTV 318
Query: 135 KEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYD 194
K W + G+ L T+ H+ V + + SIL +GS D +R++D ESG L TL
Sbjct: 319 KVWSTVDGSLLHTLQGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVESGRHLATL--- 372
Query: 195 KDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKY 254
+ V+F +G ++ D VK+W G +RT L H L +
Sbjct: 373 -----HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRT-LTGHNNRVYSLLF 424
Query: 255 NCGLELIYPQGKDPLVISGNDSGSMCVWN 283
+ + +V SG+ S+ VW+
Sbjct: 425 ---------ESERSIVCSGSLDTSIRVWD 444
>CE25007 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 587
Score = 77.4 bits (189), Expect = 3e-14
Identities = 55/207 (26%), Positives = 94/207 (44%), Gaps = 12/207 (5%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C L+ ++T + V+++ S + + H + C+ + D + SG DFTV
Sbjct: 343 CMAMAGSILVTGSRDTTLRVWDVESGRHLATLHGHHAAVRCVQF--DGTTVVSGGYDFTV 400
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+I + GR IR L GH V S+ + ++ +I+CS S+D SI+ W + ++
Sbjct: 401 KIWNAHTGRCIRTLTGHNNRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQ 460
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFS 212
+ +IL S + D +R++D G C+ L+ + I S F
Sbjct: 461 GHTSLTSGMQLRGNILVSCNADSHVRVWDIHEGTCVHMLSGHRSAIT-------SLQWFG 513
Query: 213 RNGKFLLVKSLDNVVKLWEYTRGTVVR 239
RN + S D VKLW+ RG ++R
Sbjct: 514 RN--MVATSSDDGTVKLWDIERGALIR 538
Score = 66.2 bits (160), Expect = 6e-11
Identities = 56/209 (26%), Positives = 93/209 (43%), Gaps = 24/209 (11%)
Query: 76 CWSPDSKCIASGSEDFTVEITHIIYGRIR-RLMGHTAPVISICYNNKGNILCSSSMDESI 134
C + +GS+D T+++ I G + L+GHT V + + G + S S D ++
Sbjct: 261 CMQIHDDVLVTGSDDNTLKVWCIDKGEVMYTLVGHTGGVWTSQISQCGRYIVSGSTDRTV 320
Query: 135 KEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYD 194
K W + G+ L T+ H+ V + + SIL +GS D +R++D ESG L TL
Sbjct: 321 KVWSTVDGSLLHTLQGHTSTVRCMAMA---GSILVTGSRDTTLRVWDVESGRHLATL--- 374
Query: 195 KDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKY 254
+ V+F +G ++ D VK+W G +RT L H L +
Sbjct: 375 -----HGHHAAVRCVQF--DGTTVVSGGYDFTVKIWNAHTGRCIRT-LTGHNNRVYSLLF 426
Query: 255 NCGLELIYPQGKDPLVISGNDSGSMCVWN 283
+ + +V SG+ S+ VW+
Sbjct: 427 ---------ESERSIVCSGSLDTSIRVWD 446
>Hs8922679 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 513
Score = 77.0 bits (188), Expect = 3e-14
Identities = 51/183 (27%), Positives = 85/183 (45%), Gaps = 19/183 (10%)
Query: 69 KECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTA---------PVISICYN 119
K + C +SPD + + +GS D +E+ + G+IR+ + + A V+ +C++
Sbjct: 214 KSHVECARFSPDGQYLVTGSVDGFIEVWNFTTGKIRKDLKYQAQDNFMMMDDAVLCMCFS 273
Query: 120 NKGNILCSSSMDESIKEWHVLSGTALKTMS-AHSDAVVSIDIPKFDSSILSSGSYDGLIR 178
+L + + D IK W + SG L+ AHS V + K DSS + S S+D IR
Sbjct: 274 RDTEMLATGAQDGKIKVWKIQSGQCLRRFERAHSKGVTCLSFSK-DSSQILSASFDQTIR 332
Query: 179 IFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
I +SG LK ++ E F+++G +++ S D VK+W
Sbjct: 333 IHGLKSGKTLKEFRGHSSFVNE--------ATFTQDGHYIISASSDGTVKIWNMKTTECS 384
Query: 239 RTF 241
TF
Sbjct: 385 NTF 387
>SPAC57A10.05c [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 605
Score = 76.6 bits (187), Expect = 4e-14
Identities = 68/242 (28%), Positives = 109/242 (44%), Gaps = 29/242 (11%)
Query: 41 ELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIY 100
+LI+ + + ++ +S+ + + H + + CL + DS + SGS D TV++ H
Sbjct: 325 KLISGSMDKTIRIWNYRTSECISILHGHTDSVLCLTF--DSTLLVSGSADCTVKLWHFSG 382
Query: 101 GRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDI 160
G+ L GHT PV S+ ++ S S D +IK W + + T L T SAH V S+ +
Sbjct: 383 GKRITLRGHTGPVNSVRIIRDRGLVLSGSDDSTIKIWSLETNTCLHTFSAHIGPVQSLAL 442
Query: 161 PKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLV 220
S L S S DG I+ +D E C+ TL + + E + + L+
Sbjct: 443 A---DSRLFSCSLDGTIKQWDIEKKKCVHTLFGHIEGVWE----------IAADHLRLIS 489
Query: 221 KSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMC 280
+ D VVK+WE V T L H E + D V+SG++ G +
Sbjct: 490 GAHDGVVKVWEACE--CVHT-LKNHSEPVTSVALG-----------DCEVVSGSEDGKIY 535
Query: 281 VW 282
+W
Sbjct: 536 LW 537
Score = 59.7 bits (143), Expect = 6e-09
Identities = 57/222 (25%), Positives = 101/222 (44%), Gaps = 30/222 (13%)
Query: 100 YGRIRR--LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVS 157
+GR R+ L GH+ V+ C NIL S S D +I+ W++ + + + HS V
Sbjct: 261 HGRCRQVVLSGHSDGVM--CLQLVRNILASGSYDATIRLWNLATFQQVALLEGHSSGVTC 318
Query: 158 IDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKF 217
+ +FD L SGS D IRI++ + C+ L D S + + +
Sbjct: 319 L---QFDQCKLISGSMDKTIRIWNYRTSECISILHGHTD----------SVLCLTFDSTL 365
Query: 218 LLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSG 277
L+ S D VKLW ++ G R L H ++ +I +G LV+SG+D
Sbjct: 366 LVSGSADCTVKLWHFSGGK--RITLRGHTGPVNSVR------IIRDRG---LVLSGSDDS 414
Query: 278 SMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNG 319
++ +W++ + + P+ S++ + ++ + SL+G
Sbjct: 415 TIKIWSLETNTCLHTFSA--HIGPVQSLALADSRLFSCSLDG 454
>YMR146c [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 347
Score = 75.9 bits (185), Expect = 8e-14
Identities = 55/189 (29%), Positives = 91/189 (48%), Gaps = 20/189 (10%)
Query: 105 RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFD 164
+L GH P+ + YN +G++L S S D S W+ L+G L T+ H+ + SID+ F
Sbjct: 5 KLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCF- 63
Query: 165 SSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLD 224
+ +GS D I+++D +G C+ T W VP+ V+FS G + L LD
Sbjct: 64 TKYCVTGSADYSIKLWDVSNGQCVAT------W---KSPVPVKRVEFSPCGNYFLA-ILD 113
Query: 225 NVVK------LWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQG---KDPLVISGND 275
NV+K ++E R + +E K+ + GL+ G K +I+G+
Sbjct: 114 NVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK 173
Query: 276 SGSMCVWNV 284
G + ++V
Sbjct: 174 DGKISKYDV 182
>At2g43770 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 343
Score = 75.5 bits (184), Expect = 1e-13
Identities = 63/243 (25%), Positives = 115/243 (46%), Gaps = 26/243 (10%)
Query: 64 LTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM---GHTAPVISICYNN 120
L + H + + ++P IASGS D + + + +G + M GH ++ + + +
Sbjct: 48 LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV-HGDCKNFMVLKGHKNAILDLHWTS 106
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
G+ + S+S D++++ W V +G +K M+ HS V S + ++ SGS DG +++
Sbjct: 107 DGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLW 166
Query: 181 DTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRT 240
D ++T DK I+ V FS + +DN VK+W+ +G T
Sbjct: 167 DMRQRGAIQTFP-DK--------YQITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMT 217
Query: 241 FLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNV---YSKNLVQKIDEKH 297
L HQ+T + + P G L+ +G D+ +CVW++ +N KI E H
Sbjct: 218 -LEGHQDTITGMS-------LSPDG-SYLLTNGMDN-KLCVWDMRPYAPQNRCVKIFEGH 267
Query: 298 RNS 300
+++
Sbjct: 268 QHN 270
>At2g41500 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 554
Score = 75.1 bits (183), Expect = 1e-13
Identities = 64/287 (22%), Positives = 126/287 (43%), Gaps = 20/287 (6%)
Query: 32 TSCQISPDGELIAICQNTDML-VYEISS-SKMMKLTTTHKECINCLCWSPDSKCIASGSE 89
T C S DG+++A C + + ++E+ + + + HKE + +SP C+A+ S
Sbjct: 259 TGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLATASA 318
Query: 90 DFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMS 149
D T ++ ++ GH + + ++ G L ++S D++ + W + +G L
Sbjct: 319 DRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQE 378
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
HS +V I + D ++ +S D L R++D +G + + + + P+ +V
Sbjct: 379 GHSRSVYGIAFQQ-DGALAASCGLDSLARVWDLRTGRSI--------LVFQGHIKPVFSV 429
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL 269
FS NG L DN ++W+ R + H +++KY PQ L
Sbjct: 430 NFSPNGYHLASGGEDNQCRIWD-LRMRKSLYIIPAHANLVSQVKYE-------PQEGYFL 481
Query: 270 VISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLS 316
+ D + +W+ +LV+ + + I+A +AT+S
Sbjct: 482 ATASYDM-KVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVS 527
>Hs18544419 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 446
Score = 74.3 bits (181), Expect = 2e-13
Identities = 45/190 (23%), Positives = 92/190 (47%), Gaps = 11/190 (5%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWS-PDSKCIASGSEDFTVEITHIIYGRI-RRLMGHT 110
+++ +S + + H+ + + ++ P IA+GS D T ++ + G+ GHT
Sbjct: 35 LWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWSVETGKCYHTFRGHT 94
Query: 111 APVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSS 170
A ++ + +N + ++ + SMD + K W + +G + T+ HS ++S+ I+ +
Sbjct: 95 AEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRII-T 153
Query: 171 GSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLW 230
GS+D + ++D ++G + L IS+ F+ + +L S+D KLW
Sbjct: 154 GSFDHTVVVWDADTGRKVNILI--------GHCAEISSASFNWDCSLILTGSMDKTCKLW 205
Query: 231 EYTRGTVVRT 240
+ T G V T
Sbjct: 206 DATNGKCVAT 215
Score = 71.2 bits (173), Expect = 2e-12
Identities = 50/201 (24%), Positives = 91/201 (44%), Gaps = 11/201 (5%)
Query: 37 SPDGELIAI-CQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
+P L+A +T +++I + + + H I L ++ I +GS D TV +
Sbjct: 103 NPQSTLVATGSMDTTAKLWDIQNGEEVYTLRGHSAEIISLSFNTSGDRIITGSFDHTVVV 162
Query: 96 THIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDA 154
GR + L+GH A + S +N +++ + SMD++ K W +G + T++ H D
Sbjct: 163 WDADTGRKVNILIGHCAEISSASFNWDCSLILTGSMDKTCKLWDATNGKCVATLTGHDDE 222
Query: 155 VVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRN 214
++ + ++++ S DG RIF + C+ L E IS + F+
Sbjct: 223 ILD-SCFDYTGKLIATASADGTARIFSAATRKCIAKL--------EGHEGEISKISFNPQ 273
Query: 215 GKFLLVKSLDNVVKLWEYTRG 235
G LL S D ++W+ G
Sbjct: 274 GNHLLTGSSDKTARIWDAQTG 294
Score = 53.5 bits (127), Expect = 4e-07
Identities = 33/133 (24%), Positives = 61/133 (45%), Gaps = 6/133 (4%)
Query: 26 ASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIA 85
+S + C + G + C+ +++ ++ K + T H + I C+ K IA
Sbjct: 182 SSASFNWDCSLILTGSMDKTCK-----LWDATNGKCVATLTGHDDEILDSCFDYTGKLIA 236
Query: 86 SGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTA 144
+ S D T I + I +L GH + I +N +GN L + S D++ + W +G
Sbjct: 237 TASADGTARIFSAATRKCIAKLEGHEGEISKISFNPQGNHLLTGSSDKTARIWDAQTGQC 296
Query: 145 LKTMSAHSDAVVS 157
L+ + H+D + S
Sbjct: 297 LQVLEGHTDEIFS 309
Score = 52.4 bits (124), Expect = 9e-07
Identities = 38/170 (22%), Positives = 78/170 (45%), Gaps = 3/170 (1%)
Query: 30 ISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSE 89
IS S S D + +T ++V++ + + + + H I+ ++ D I +GS
Sbjct: 140 ISLSFNTSGDRIITGSFDHT-VVVWDADTGRKVNILIGHCAEISSASFNWDCSLILTGSM 198
Query: 90 DFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM 148
D T ++ G+ + L GH ++ C++ G ++ ++S D + + + + + +
Sbjct: 199 DKTCKLWDATNGKCVATLTGHDDEILDSCFDYTGKLIATASADGTARIFSAATRKCIAKL 258
Query: 149 SAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWI 198
H + I + +L+ GS D RI+D ++G CL+ L D I
Sbjct: 259 EGHEGEISKISFNPQGNHLLT-GSSDKTARIWDAQTGQCLQVLEGHTDEI 307
Score = 51.2 bits (121), Expect = 2e-06
Identities = 46/202 (22%), Positives = 79/202 (38%), Gaps = 30/202 (14%)
Query: 122 GNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
G + S D + K W SG L T+ H + V +I +++GS+D +++
Sbjct: 21 GPSFITGSYDRTCKLWDTASGEELNTLEGHRNVVYAIAFNNPYGDKIATGSFDKTCKLWS 80
Query: 182 TESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
E+G C T I + F+ + S+D KLW+ G V T
Sbjct: 81 VETGKCYHTF--------RGHTAEIVCLSFNPQSTLVATGSMDTTAKLWDIQNGEEVYT- 131
Query: 242 LWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSP 301
L H L +N + I I+G+ ++ VW+ D + +
Sbjct: 132 LRGHSAEIISLSFNTSGDRI---------ITGSFDHTVVVWDA---------DTGRKVNI 173
Query: 302 LISISASYDKVATLSLNGECNL 323
LI A ++++ S N +C+L
Sbjct: 174 LIGHCA---EISSASFNWDCSL 192
>At5g50230 [R] KOG0288 WD40 repeat protein TipD
Length = 515
Score = 73.9 bits (180), Expect = 3e-13
Identities = 69/319 (21%), Positives = 131/319 (40%), Gaps = 43/319 (13%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKC 83
L A+G + T + DG + TD V S H+ + + +S
Sbjct: 187 LKANG-LETLARQQVDGIVRRNEDGTDHFVESTIPSTCANRIHAHEGGCGSIVFEYNSGT 245
Query: 84 IASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG 142
+ +G +D V++ G I+ L G ++ + + + +++ ++ W V SG
Sbjct: 246 LFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSG 305
Query: 143 TALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD------ 196
T++ H+D V ++D+ KF S + S +YD I+++D G+C T+ + +
Sbjct: 306 RVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICL 365
Query: 197 ------------------WIAEDGVV---------PISTVKFSRNGKFLLVKSLDNVVKL 229
W + G + +++V SRNG +L DNV +
Sbjct: 366 SIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNV 425
Query: 230 WEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNL 289
++ + T + + +L N I P D V +G+ GS+ VW++ N+
Sbjct: 426 FDTRTLEICGTL----RASGNRLASNWSRSCISPD--DDYVAAGSADGSVHVWSLSKGNI 479
Query: 290 VQKIDEKHRNSPLISISAS 308
V + K + SP++ S S
Sbjct: 480 VSIL--KEQTSPILCCSWS 496
Score = 67.8 bits (164), Expect = 2e-11
Identities = 50/219 (22%), Positives = 102/219 (45%), Gaps = 6/219 (2%)
Query: 21 KQVLPASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSP- 79
K + + G I + +IA + ++ V+++SS ++ T H + + + S
Sbjct: 267 KSLYGSLGNILDMAVTHDNKSVIAATSSNNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKF 326
Query: 80 DSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV 139
S+ + S + D T+++ + G + T+ +IC + G + S MD +++ W +
Sbjct: 327 SSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDI 386
Query: 140 LSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIA 199
+G L ++ HS AV S+ + + + IL+SG D + +FDT + TL + +A
Sbjct: 387 QTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGR-DNVHNVFDTRTLEICGTLRASGNRLA 445
Query: 200 EDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
+ S S + ++ S D V +W ++G +V
Sbjct: 446 SNW----SRSCISPDDDYVAAGSADGSVHVWSLSKGNIV 480
Score = 60.1 bits (144), Expect = 4e-09
Identities = 47/220 (21%), Positives = 95/220 (42%), Gaps = 19/220 (8%)
Query: 105 RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFD 164
R+ H SI + L + D ++K W SGT +K++ ++ + + +
Sbjct: 226 RIHAHEGGCGSIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDN 285
Query: 165 SSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLD 224
S++++ S + L ++D SG TLT D V + KFS + ++ + D
Sbjct: 286 KSVIAATSSNNLF-VWDVSSGRVRHTLTGHTD-----KVCAVDVSKFS--SRHVVSAAYD 337
Query: 225 NVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNV 284
+KLW+ +G T L+ NC + G V SG+ G++ +W++
Sbjct: 338 RTIKLWDLHKGYCTNTVLFTS---------NCNAICLSIDGLT--VFSGHMDGNLRLWDI 386
Query: 285 YSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGECNLF 324
+ L+ ++ +S+S + +++ T + N+F
Sbjct: 387 QTGKLLSEVAGHSSAVTSVSLSRNGNRILTSGRDNVHNVF 426
>7302979 [S] KOG0295 WD40 repeat-containing protein
Length = 411
Score = 73.6 bits (179), Expect = 4e-13
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 11/226 (4%)
Query: 66 TTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRR-LMGHTAPVISICYNNKGNI 124
T H+ I + + P + S SED T+ I G R L GHT V + ++ +G +
Sbjct: 105 TGHRASITRVIFHPIFALMVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKL 164
Query: 125 LCSSSMDESIKEWHV-LSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTE 183
L S S D SIK W S +KTM H V S+ +LS+ S D I++++
Sbjct: 165 LASCSADLSIKLWDFQQSYECIKTMHGHDHNVSSVAFVPAGDYVLSA-SRDRTIKMWEVA 223
Query: 184 SGHCLKTLTYDKDWIAE-----DGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
+G+C+KT T ++W+ +G + +T + + L S D V+L ++ V
Sbjct: 224 TGYCVKTYTGHREWVRMVRVHIEGSI-FATCSNDQTIRVWLTNSKDCKVELRDHEH--TV 280
Query: 239 RTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNV 284
W + + + G + + P + SG+ ++ +W+V
Sbjct: 281 ECIAWAPEAAASAINEAAGADNKKGHHQGPFLASGSRDKTIRIWDV 326
Score = 70.9 bits (172), Expect = 2e-12
Identities = 58/266 (21%), Positives = 119/266 (43%), Gaps = 25/266 (9%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI--I 99
+++ ++ + +++ + + + H + + + + K +AS S D ++++
Sbjct: 123 MVSASEDATIRIWDFETGEYERSLKGHTDSVQDVAFDAQGKLLASCSADLSIKLWDFQQS 182
Query: 100 YGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID 159
Y I+ + GH V S+ + G+ + S+S D +IK W V +G +KT + H + V +
Sbjct: 183 YECIKTMHGHDHNVSSVAFVPAGDYVLSASRDRTIKMWEVATGYCVKTYTGHREWVRMVR 242
Query: 160 IPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD------WIAEDGVVPISTV---- 209
+ + SI ++ S D IR++ T S C L + W E I+
Sbjct: 243 V-HIEGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGAD 301
Query: 210 --KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKD 267
K G FL S D +++W+ + G + T L H L + +P GK
Sbjct: 302 NKKGHHQGPFLASGSRDKTIRIWDVSVGLCLLT-LSGHDNWVRGLAF-------HPGGK- 352
Query: 268 PLVISGNDSGSMCVWNVYSKNLVQKI 293
++S +D ++ VW++ +K ++ +
Sbjct: 353 -YLVSASDDKTIRVWDLRNKRCMKTL 377
Score = 63.5 bits (153), Expect = 4e-10
Identities = 42/165 (25%), Positives = 77/165 (46%), Gaps = 23/165 (13%)
Query: 39 DGELIAICQNTDMLVYEISSSKMMKLTTT-HKECINCLCWSPDSKC-------------- 83
+G + A C N + +++SK K+ H+ + C+ W+P++
Sbjct: 246 EGSIFATCSNDQTIRVWLTNSKDCKVELRDHEHTVECIAWAPEAAASAINEAAGADNKKG 305
Query: 84 ------IASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKE 136
+ASGS D T+ I + G + L GH V + ++ G L S+S D++I+
Sbjct: 306 HHQGPFLASGSRDKTIRIWDVSVGLCLLTLSGHDNWVRGLAFHPGGKYLVSASDDKTIRV 365
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
W + + +KT+ AH SID K ++ SGS D +++++
Sbjct: 366 WDLRNKRCMKTLYAHQHFCTSIDFHKAHPYVI-SGSVDQTVKVWE 409
>SPBP22H7.07 [A] KOG0285 Pleiotropic regulator 1
Length = 473
Score = 72.4 bits (176), Expect = 8e-13
Identities = 64/260 (24%), Positives = 114/260 (43%), Gaps = 27/260 (10%)
Query: 58 SSKMMKLTTT-HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVIS 115
+S ++KLT T H + L SP + S ED V+ + + IR GH + V +
Sbjct: 193 ASGVLKLTLTGHIATVRGLAVSPRHPYLFSCGEDKMVKCWDLETNKVIRHYHGHLSGVYA 252
Query: 116 ICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDG 175
+ + ++L ++ D + W + + + +S H V S+ + +FD +++ GS D
Sbjct: 253 LKLHPTLDVLVTAGRDAVARVWDMRTRQNVHVLSGHKSTVASLAVQEFDPQVVT-GSMDS 311
Query: 176 LIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
IR++D +G L TLT+ K + + P +F + +K W++ G
Sbjct: 312 TIRLWDLAAGKTLTTLTHHKKTVRALSLHP---------DEFTFASGSSDNIKHWKFPEG 362
Query: 236 TVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDE 295
+ F H L N D ++ SG D+GSMC W+ S + Q++
Sbjct: 363 AFMGNFEG-HNAIVNTLSIN----------SDNVMFSGADNGSMCFWDWKSGHKYQELQS 411
Query: 296 KHRNSPLIS----ISASYDK 311
+ L S ++S+DK
Sbjct: 412 VVQPGSLDSEAGIFASSFDK 431
>7302082 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 424
Score = 72.4 bits (176), Expect = 8e-13
Identities = 57/266 (21%), Positives = 119/266 (44%), Gaps = 16/266 (6%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDMLV-YEISSSKMMKLTTTHKECINCLCWSPDSK 82
L A+G + S +I ++A D+ E +++ H + ++ L + P
Sbjct: 120 LVATGSVDASIKILDVERMLAKSAPEDIEPGREQQGHPVIRTLYDHTDEVSYLEFHPKEH 179
Query: 83 CIASGSEDFTVEITHIIYGRIRR---LMGHTAPVISICYNNKGNILCSSSMDESIKEWHV 139
+AS S D TV++ I +++ + PV+ + ++ G+ + + ++ + V
Sbjct: 180 ILASASRDGTVKLFDIAKPSVKKAHKVFTDCEPVLCLSFHPTGDYVAIGTEHNVLRVYDV 239
Query: 140 LSGTALKTMSAHSDAVVSIDIPKFDSS--ILSSGSYDGLIRIFDTESGHCLKTLTYDKDW 197
+ + + K+ + + ++GSYDG I+I+D SG C+ T+
Sbjct: 240 ATTQCFVSAIPSQQHKAGVTCVKYSPTGKLYATGSYDGDIKIWDGISGRCINTIA----- 294
Query: 198 IAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCG 257
G I +++F+RNGK+LL +D++V LWE ++T+ K + +
Sbjct: 295 -EAHGGAAICSLEFTRNGKYLLSSGMDSLVYLWELCTSRPIQTYTGAGTTGKQEHQ---- 349
Query: 258 LELIYPQGKDPLVISGNDSGSMCVWN 283
E ++ +D ++ + S+C WN
Sbjct: 350 TEAVFNHTEDYVLFPDEATTSLCSWN 375
>Hs5803221 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 72.0 bits (175), Expect = 1e-12
Identities = 46/193 (23%), Positives = 95/193 (48%), Gaps = 10/193 (5%)
Query: 40 GELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHII 99
G +A+ + ++++ + + + K+ + CLC SPD +A G ED ++ I ++
Sbjct: 36 GRYVAVPACEHVFIWDLRKGEKILILQGLKQEVTCLCPSPDGLHLAVGYEDGSIRIFSLL 95
Query: 100 YGRIR-RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSI 158
G GH A + ++ Y+ G L S S D I W V++ + L + H DA+
Sbjct: 96 SGEGNVTFNGHKAAITTLKYDQLGGRLASGSKDTDIIVWDVINESGLYRLKGHKDAITQA 155
Query: 159 DIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFL 218
+ + +++SG D +++ +D ++ HC KT+ + + G+V +S K L
Sbjct: 156 LFLREKNLLVTSGK-DTMVKWWDLDTQHCFKTMVGHRTEVW--GLVLLS------EEKRL 206
Query: 219 LVKSLDNVVKLWE 231
+ + D+ +++W+
Sbjct: 207 ITGASDSELRVWD 219
Score = 62.8 bits (151), Expect = 7e-10
Identities = 50/190 (26%), Positives = 93/190 (48%), Gaps = 16/190 (8%)
Query: 55 EISSSKMMKLTTTHK----ECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI-RRLMGH 109
E S+ K + + T E + C+ +SP+ K +A D TV+I ++ + L GH
Sbjct: 531 ENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGH 590
Query: 110 TAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID-IPKFDSSIL 168
PVI + ++ G ++ + S D ++K W + G K++ AH D+V+ + +PK S +
Sbjct: 591 KLPVICMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPK--SHLF 648
Query: 169 SSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
+ D I+ +D + ++TL E I + S +G +++ S D ++
Sbjct: 649 FTAGKDHKIKQWDADKFEHIQTL--------EGHHQEIWCLAVSPSGDYVVSSSHDKSLR 700
Query: 229 LWEYTRGTVV 238
LWE TR ++
Sbjct: 701 LWERTREPLI 710
Score = 51.6 bits (122), Expect = 2e-06
Identities = 45/221 (20%), Positives = 99/221 (44%), Gaps = 21/221 (9%)
Query: 39 DGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI 98
D +++ + + +Y+++S +++ H + + SPD + +G D +V+
Sbjct: 466 DRQVVIGTKTGKLQLYDLASGNLLETIDAHDGALWSMSLSPDQRGFVTGGADKSVKFWDF 525
Query: 99 ------------IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALK 146
+ + R + V+ + Y+ +L S +D ++K ++V +
Sbjct: 526 ELVKDENSTQKRLSVKQTRTLQLDEDVLCVSYSPNQKLLAVSLLDCTVKIFYVDTLKFFL 585
Query: 147 TMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPI 206
++ H V+ +DI D +++++GS D ++I+ + G C K+L D + VP
Sbjct: 586 SLYGHKLPVICMDI-SHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPK 644
Query: 207 STVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQE 247
S + F+ GK D+ +K W+ + ++T HQE
Sbjct: 645 SHLFFTA-GK-------DHKIKQWDADKFEHIQTLEGHHQE 677
Score = 50.8 bits (120), Expect = 3e-06
Identities = 40/169 (23%), Positives = 79/169 (46%), Gaps = 11/169 (6%)
Query: 15 RMLQFDKQVLPASGKISTSCQISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECIN 73
R LQ D+ VL S SP+ +L+A+ + + ++ + + K HK +
Sbjct: 544 RTLQLDEDVLCVS--------YSPNQKLLAVSLLDCTVKIFYVDTLKFFLSLYGHKLPVI 595
Query: 74 CLCWSPDSKCIASGSEDFTVEITHIIYGRIRR-LMGHTAPVISICYNNKGNILCSSSMDE 132
C+ S D IA+GS D V+I + +G + L H V+ + + K ++ ++ D
Sbjct: 596 CMDISHDGALIATGSADRNVKIWGLDFGDCHKSLFAHDDSVMYLQFVPKSHLFFTAGKDH 655
Query: 133 SIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
IK+W ++T+ H + + + ++SS S+D +R+++
Sbjct: 656 KIKQWDADKFEHIQTLEGHHQEIWCLAVSPSGDYVVSS-SHDKSLRLWE 703
>CE05533 [A] KOG0285 Pleiotropic regulator 1
Length = 494
Score = 72.0 bits (175), Expect = 1e-12
Identities = 59/258 (22%), Positives = 116/258 (44%), Gaps = 22/258 (8%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTA 111
+++++S ++ T H + + SP + SG ED V+ + Y + IR GH +
Sbjct: 210 IWDLASGQLKLSLTGHISSVRAVKVSPRHPFLFSGGEDKQVKCWDLEYNKVIRHYHGHLS 269
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
V ++ + ++L + + D + + W + + + + H++ V + D ++++
Sbjct: 270 AVQALSVHPSLDVLVTCARDSTARVWDMRTKAQVHCFAGHTNTVADVVCQSVDPQVITA- 328
Query: 172 SYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
S+D +R++D +G + TLT+ K + + P + S S DN+ K W+
Sbjct: 329 SHDATVRLWDLAAGRSMCTLTHHKKSVRALTIHPRLNMFASA--------SPDNI-KQWK 379
Query: 232 YTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQ 291
+G ++ L H L N D +V+SG D+GS+C W+ S Q
Sbjct: 380 LPKGEFMQN-LSGHNAIINTLSSN----------DDGVVVSGADNGSLCFWDWRSGFCFQ 428
Query: 292 KIDEKHRNSPLISISASY 309
KI K + + S + Y
Sbjct: 429 KIQTKPQPGSIESEAGIY 446
>At1g11160 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 974
Score = 72.0 bits (175), Expect = 1e-12
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GHT+PV S+ +N++ ++ + + IK W + ++ + H +++ F
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPF-G 61
Query: 166 SILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDN 225
L+SGS D +R++DT C++T + IST++FS +G++++ LDN
Sbjct: 62 EFLASGSSDTNLRVWDTRKKGCIQTY--------KGHTRGISTIEFSPDGRWVVSGGLDN 113
Query: 226 VVKLWEYTRGTVVRTF 241
VVK+W+ T G ++ F
Sbjct: 114 VVKVWDLTAGKLLHEF 129
Score = 57.8 bits (138), Expect = 2e-08
Identities = 34/139 (24%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIY-GRIRRLMGHTA 111
++++ SKM++ T H+ + + + P + +ASGS D + + G I+ GHT
Sbjct: 33 LWDLEESKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDTNLRVWDTRKKGCIQTYKGHTR 92
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
+ +I ++ G + S +D +K W + +G L H + S+D + +L++G
Sbjct: 93 GISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDFHPLE-FLLATG 151
Query: 172 SYDGLIRIFDTESGHCLKT 190
S D ++ +D E+ + T
Sbjct: 152 SADRTVKFWDLETFELIGT 170
>Hs19913371 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 514
Score = 71.6 bits (174), Expect = 1e-12
Identities = 45/166 (27%), Positives = 81/166 (48%), Gaps = 17/166 (10%)
Query: 85 ASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT 143
AS S D + + + R I+ GHT V +I ++ GN+L S S D ++K W +
Sbjct: 323 ASCSTDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDN 382
Query: 144 ALKTMSAHSDAVVSIDIPKFD--------SSILSSGSYDGLIRIFDTESGHCLKTLTYDK 195
+ + AH+ + +I + +L+S S+D +R++D + G C+ TLT +
Sbjct: 383 CVHDLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQ 442
Query: 196 DWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
+ P+ +V FS +G++L S D V +W G +V ++
Sbjct: 443 E--------PVYSVAFSPDGRYLASGSFDKCVHIWNTQTGALVHSY 480
Score = 62.0 bits (149), Expect = 1e-09
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 13/150 (8%)
Query: 48 NTDMLVY--EISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IR 104
+TDM ++ ++ + +K H +N + W P +AS S+D T++I + +
Sbjct: 326 STDMCIHVCKLGQDRPIKTFQGHTNEVNAIKWDPTGNLLASCSDDMTLKIWSMKQDNCVH 385
Query: 105 RLMGHTAPVISICYN---------NKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
L H + +I ++ N +L S+S D +++ W V G + T++ H + V
Sbjct: 386 DLQAHNKEIYTIKWSPTGPGTNNPNANLMLASASFDSTVRLWDVDRGICIHTLTKHQEPV 445
Query: 156 VSIDIPKFDSSILSSGSYDGLIRIFDTESG 185
S+ D L+SGS+D + I++T++G
Sbjct: 446 YSVAFSP-DGRYLASGSFDKCVHIWNTQTG 474
Score = 50.8 bits (120), Expect = 3e-06
Identities = 50/198 (25%), Positives = 81/198 (40%), Gaps = 42/198 (21%)
Query: 48 NTDMLVY----EISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI 103
+TDM+ EI +K + L E C W+P S +ASGS D T I ++
Sbjct: 145 HTDMMEVDGDVEIPPNKAVVLRGHESEVFIC-AWNPVSDLLASGSGDSTARIWNL---SE 200
Query: 104 RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF 163
G T V+ C G + S+ D + +W+
Sbjct: 201 NSTSGSTQLVLRHCIREGGQDV-PSNKDVTSLDWN------------------------S 235
Query: 164 DSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSL 223
+ ++L++GSYDG RI+ T+ G+ TL K PI +K+++ G F+L +
Sbjct: 236 EGTLLATGSYDGFARIW-TKDGNLASTLGQHKG--------PIFALKWNKKGNFILSAGV 286
Query: 224 DNVVKLWEYTRGTVVRTF 241
D +W+ G + F
Sbjct: 287 DKTTIIWDAHTGEAKQQF 304
>Hs13376840 [R] KOG4155 FOG: WD40 repeat
Length = 305
Score = 71.6 bits (174), Expect = 1e-12
Identities = 56/216 (25%), Positives = 97/216 (43%), Gaps = 11/216 (5%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAP 112
++++ + K +K L +SPDS+ +A+G+ V I + G+ +
Sbjct: 90 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGK 149
Query: 113 -VISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
++SI Y+ G L S ++D I + + +G L T+ H+ + S+ DS +L +
Sbjct: 150 FILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSP-DSQLLVTA 208
Query: 172 SYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
S DG I+I+D + + TL+ W+ V F + + S D VK+W+
Sbjct: 209 SDDGYIKIYDVQHANLAGTLSGHASWVL--------NVAFCPDDTHFVSSSSDKSVKVWD 260
Query: 232 YTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKD 267
T V TF + HQ+ +KYN I G D
Sbjct: 261 VGTRTCVHTF-FDHQDQVWGVKYNGNGSKIVSVGDD 295
Score = 66.6 bits (161), Expect = 5e-11
Identities = 46/160 (28%), Positives = 79/160 (48%), Gaps = 3/160 (1%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSK 82
L GK S SPDG+ +A ++ +++I++ K++ H I L +SPDS+
Sbjct: 144 LDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ 203
Query: 83 CIASGSEDFTVEITHIIYGRIR-RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLS 141
+ + S+D ++I + + + L GH + V+++ + SSS D+S+K W V +
Sbjct: 204 LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 263
Query: 142 GTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
T + T H D V + S I+S G D I I+D
Sbjct: 264 RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGD-DQEIHIYD 302
Score = 59.3 bits (142), Expect = 7e-09
Identities = 57/237 (24%), Positives = 110/237 (46%), Gaps = 28/237 (11%)
Query: 61 MMKLTTTHKECINCLCWSPDSK----CIASGSEDFTVEITHIIYGRIR---RLMGHTAPV 113
+ K H + I + W + K + +GS D V++ R+ L GH V
Sbjct: 8 LFKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGV 67
Query: 114 ISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS-DAVVSIDIPKFDSSILSSGS 172
+S+ ++ I SSS+D I+ W + +G +K++ A DA P DS L++G+
Sbjct: 68 VSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSP--DSQYLATGT 125
Query: 173 YDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEY 232
+ G + IF ESG K++ + I ++ +S +GK+L ++D ++ +++
Sbjct: 126 HVGKVNIFGVESG--------KKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDI 177
Query: 233 TRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNL 289
G ++ T L H L ++ P + L+++ +D G + +++V NL
Sbjct: 178 ATGKLLHT-LEGHAMPIRSLTFS-------PDSQ--LLVTASDDGYIKIYDVQHANL 224
>Hs22046076 [R] KOG0266 WD40 repeat-containing protein
Length = 177
Score = 70.5 bits (171), Expect = 3e-12
Identities = 50/169 (29%), Positives = 87/169 (50%), Gaps = 15/169 (8%)
Query: 61 MMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI--THIIYGRI--RRLMGHTAPVISI 116
M++L H++ I +SP C+A+GS D TV I ++ + + L GH+A + +
Sbjct: 1 MLRLLVGHRDSIQSSDFSPTVNCLATGSWDSTVHIWDLRMVTPAVSHQALEGHSANISCL 60
Query: 117 CYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGL 176
CY+ G +L S S D++I W + + L + H V SI D L+S Y +
Sbjct: 61 CYSASG-LLASGSWDKTIHIWKPTTSSLLIQLKGHVTWVKSIAFSP-DELWLASAGYSRM 118
Query: 177 IRIFDTESGHCLKTLTYDKDWIAEDGVVPIS-TVKFSRNGKFLLVKSLD 224
++++D +G CL+TL + GV+ ++ T F+ +GK L+ + D
Sbjct: 119 VKVWDCNTGKCLETL--------KQGVLDVAHTCAFTPDGKILVSGAAD 159
>Hs5032159 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 577
Score = 69.7 bits (169), Expect = 5e-12
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 85 ASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT 143
AS S D + + + R ++ GHT V +I ++ G +L S S D ++K W +
Sbjct: 386 ASCSTDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEV 445
Query: 144 ALKTMSAHSDAVVSIDIPKFDSS--------ILSSGSYDGLIRIFDTESGHCLKTLTYDK 195
+ + AH+ + +I + +L+S S+D +R++D E G C TLT +
Sbjct: 446 CIHDLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQ 505
Query: 196 DWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
+ P+ +V FS +GK+L S D V +W G +V ++
Sbjct: 506 E--------PVYSVAFSPDGKYLASGSFDKCVHIWNTQSGNLVHSY 543
Score = 61.6 bits (148), Expect = 1e-09
Identities = 39/151 (25%), Positives = 73/151 (47%), Gaps = 13/151 (8%)
Query: 48 NTDMLVY--EISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG-RIR 104
+TDM ++ + + +K H +N + W P +AS S+D T++I + I
Sbjct: 389 STDMCIHVCRLGCDRPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEVCIH 448
Query: 105 RLMGHTAPVISICYN---------NKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
L H + +I ++ N +L S+S D +++ W + G T++ H + V
Sbjct: 449 DLQAHNKEIYTIKWSPTGPATSNPNSNIMLASASFDSTVRLWDIERGVCTHTLTKHQEPV 508
Query: 156 VSIDIPKFDSSILSSGSYDGLIRIFDTESGH 186
S+ D L+SGS+D + I++T+SG+
Sbjct: 509 YSVAFSP-DGKYLASGSFDKCVHIWNTQSGN 538
>Hs21071065 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 745
Score = 69.7 bits (169), Expect = 5e-12
Identities = 35/121 (28%), Positives = 64/121 (51%), Gaps = 2/121 (1%)
Query: 62 MKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNN 120
+++ H +NC + P+S +A+GS D TV + ++ G +R GH P+ S+ ++
Sbjct: 565 LRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSP 624
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
G L + + D + W + G + + H+D V S+ + D IL+SGS D +R++
Sbjct: 625 NGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSR-DGEILASGSMDNTVRLW 683
Query: 181 D 181
D
Sbjct: 684 D 684
Score = 60.1 bits (144), Expect = 4e-09
Identities = 34/132 (25%), Positives = 65/132 (48%), Gaps = 9/132 (6%)
Query: 100 YGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID 159
Y +R GH A V ++ N + + S D +++ W VL+G ++ + H + S+
Sbjct: 562 YQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT 621
Query: 160 IPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLL 219
+ L++G+ DG + ++D G + L D + +++FSR+G+ L
Sbjct: 622 FSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHTD--------TVCSLRFSRDGEILA 672
Query: 220 VKSLDNVVKLWE 231
S+DN V+LW+
Sbjct: 673 SGSMDNTVRLWD 684
Score = 55.5 bits (132), Expect = 1e-07
Identities = 34/122 (27%), Positives = 65/122 (52%), Gaps = 2/122 (1%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG-RIRRLMGHTA 111
++++ + +++ T HK I+ L +SP+ + +A+G+ D V + I +G + L GHT
Sbjct: 598 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 657
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
V S+ ++ G IL S SMD +++ W + + A I++P+ +S L G
Sbjct: 658 TVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPE-NSQELLLG 716
Query: 172 SY 173
+Y
Sbjct: 717 TY 718
Score = 55.5 bits (132), Expect = 1e-07
Identities = 52/214 (24%), Positives = 93/214 (43%), Gaps = 37/214 (17%)
Query: 80 DSKCIASGSEDFTVEITHIIYGRIR--------------------RLMGH-TAPVISICY 118
DS IA G D TV + + ++R R+M TA + I Y
Sbjct: 481 DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY 540
Query: 119 NNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF--DSSILSSGSYDGL 176
+ G + +S + + W L+ + H + ++ +F +S+ +++GS D
Sbjct: 541 GHSGPVYGASFSPDRL--WATDHYQPLRIFAGH---LADVNCTRFHPNSNYVATGSADRT 595
Query: 177 IRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGT 236
+R++D +G+C++ T K PI ++ FS NG+FL + D V LW+ G
Sbjct: 596 VRLWDVLNGNCVRIFTGHKG--------PIHSLTFSPNGRFLATGATDGRVLLWDIGHGL 647
Query: 237 VVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLV 270
+V L H +T L+++ E++ D V
Sbjct: 648 MVGE-LKGHTDTVCSLRFSRDGEILASGSMDNTV 680
>Hs16306498 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 508
Score = 69.7 bits (169), Expect = 5e-12
Identities = 60/255 (23%), Positives = 116/255 (44%), Gaps = 33/255 (12%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C D ++I+ ++ + +++ +S + +K+ T H + CL + D + I +GS D TV
Sbjct: 211 CLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTV 268
Query: 94 EITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTAL---KTMS 149
+ + G + L+ H V+ + ++N + CS D SI W + S T + + +
Sbjct: 269 RVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMASATDITLRRVLV 326
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
H AV +D FD + S S D I+++ T + ++TL K IA
Sbjct: 327 GHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA---------- 373
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL 269
+ ++ S DN ++LW+ G +R L H+E ++++ +
Sbjct: 374 CLQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRFD-----------NKR 421
Query: 270 VISGNDSGSMCVWNV 284
++SG G + VW++
Sbjct: 422 IVSGAYDGKIKVWDL 436
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/166 (24%), Positives = 84/166 (49%), Gaps = 20/166 (12%)
Query: 39 DGELIAICQNTDMLVYEISSSK---MMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
+G ++ ++ + V++++S+ + ++ H+ +N + + D K I S S D T+++
Sbjct: 296 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 353
Query: 96 THIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDA 154
+R L GH + + Y ++ ++ S S D +I+ W + G L+ + H +
Sbjct: 354 WSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEEL 411
Query: 155 VVSIDIPKFDSSILSSGSYDGLIRIFDTE---------SGHCLKTL 191
V I +FD+ + SG+YDG I+++D + S CL+TL
Sbjct: 412 VRCI---RFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 454
>Hs16306496 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 529
Score = 69.7 bits (169), Expect = 5e-12
Identities = 60/255 (23%), Positives = 116/255 (44%), Gaps = 33/255 (12%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C D ++I+ ++ + +++ +S + +K+ T H + CL + D + I +GS D TV
Sbjct: 232 CLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTV 289
Query: 94 EITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTAL---KTMS 149
+ + G + L+ H V+ + ++N + CS D SI W + S T + + +
Sbjct: 290 RVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMASATDITLRRVLV 347
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
H AV +D FD + S S D I+++ T + ++TL K IA
Sbjct: 348 GHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA---------- 394
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL 269
+ ++ S DN ++LW+ G +R L H+E ++++ +
Sbjct: 395 CLQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRFD-----------NKR 442
Query: 270 VISGNDSGSMCVWNV 284
++SG G + VW++
Sbjct: 443 IVSGAYDGKIKVWDL 457
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/166 (24%), Positives = 84/166 (49%), Gaps = 20/166 (12%)
Query: 39 DGELIAICQNTDMLVYEISSSK---MMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
+G ++ ++ + V++++S+ + ++ H+ +N + + D K I S S D T+++
Sbjct: 317 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 374
Query: 96 THIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDA 154
+R L GH + + Y ++ ++ S S D +I+ W + G L+ + H +
Sbjct: 375 WSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEEL 432
Query: 155 VVSIDIPKFDSSILSSGSYDGLIRIFDTE---------SGHCLKTL 191
V I +FD+ + SG+YDG I+++D + S CL+TL
Sbjct: 433 VRCI---RFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 475
>Hs16306494 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 542
Score = 69.7 bits (169), Expect = 5e-12
Identities = 60/255 (23%), Positives = 116/255 (44%), Gaps = 33/255 (12%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C D ++I+ ++ + +++ +S + +K+ T H + CL + D + I +GS D TV
Sbjct: 245 CLQYDDEKIISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQY--DERVIVTGSSDSTV 302
Query: 94 EITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTAL---KTMS 149
+ + G + L+ H V+ + ++N + CS D SI W + S T + + +
Sbjct: 303 RVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMVTCSK--DRSIAVWDMASATDITLRRVLV 360
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
H AV +D FD + S S D I+++ T + ++TL K IA
Sbjct: 361 GHRAAVNVVD---FDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIA---------- 407
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL 269
+ ++ S DN ++LW+ G +R L H+E ++++ +
Sbjct: 408 CLQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRFD-----------NKR 455
Query: 270 VISGNDSGSMCVWNV 284
++SG G + VW++
Sbjct: 456 IVSGAYDGKIKVWDL 470
Score = 58.5 bits (140), Expect = 1e-08
Identities = 41/166 (24%), Positives = 84/166 (49%), Gaps = 20/166 (12%)
Query: 39 DGELIAICQNTDMLVYEISSSK---MMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
+G ++ ++ + V++++S+ + ++ H+ +N + + D K I S S D T+++
Sbjct: 330 NGLMVTCSKDRSIAVWDMASATDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKV 387
Query: 96 THIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDA 154
+R L GH + + Y ++ ++ S S D +I+ W + G L+ + H +
Sbjct: 388 WSTSTCEFVRTLNGHKRGIACLQYRDR--LVVSGSSDNTIRLWDIECGACLRVLEGHEEL 445
Query: 155 VVSIDIPKFDSSILSSGSYDGLIRIFDTE---------SGHCLKTL 191
V I +FD+ + SG+YDG I+++D + S CL+TL
Sbjct: 446 VRCI---RFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTL 488
>CE29339 [S] KOG0295 WD40 repeat-containing protein
Length = 404
Score = 69.3 bits (168), Expect = 7e-12
Identities = 63/297 (21%), Positives = 132/297 (44%), Gaps = 29/297 (9%)
Query: 42 LIAIC-QNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI-- 98
++A C ++ + V++ + ++ + H + +N + K + S S D ++++
Sbjct: 120 IMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQLVSCSSDLSIKLWDFGQ 179
Query: 99 IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSI 158
Y ++ L GH V S+ + G+ + S+S D +IK+W + +G + T H+D V I
Sbjct: 180 TYDCLKSLKGHEHTVSSVTFLPTGDFVLSASRDHTIKQWDISTGYCVYTFRGHNDWVRMI 239
Query: 159 DIPKFDSSILSSGSYDGLIRI--FDTESG--------HCLKTLTYDKDWIAEDGVVPIST 208
I D ++ +S S D + + F T+S H ++ + +W + ++
Sbjct: 240 RISN-DGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECV----EWAPDTAYTNVTG 294
Query: 209 VKFSRNGKFLLVK-SLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKD 267
+ N +L S D +K W G V+ T L H+ L + +P+GK
Sbjct: 295 QQPEGNSTHILFSGSRDRSIKAWNINTGDVLFTLL-AHENWVRGLAF-------HPKGK- 345
Query: 268 PLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGECNLF 324
+IS D ++ VW + ++ ++ I+ ++ + V T S++ C ++
Sbjct: 346 -YLISVADDKTLRVWELSAQRCMKAIEAHEHFVSTVAFHQTSPFVITGSVDMSCKVW 401
Score = 68.9 bits (167), Expect = 9e-12
Identities = 59/227 (25%), Positives = 98/227 (42%), Gaps = 18/227 (7%)
Query: 66 TTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRR-LMGHTAPVISICYNNKGNI 124
T H+ I + + P +AS SED T+++ G++ R L GHT V I + G
Sbjct: 103 TGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAAGKQ 162
Query: 125 LCSSSMDESIKEWHV-LSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTE 183
L S S D SIK W + LK++ H V S+ +LS+ S D I+ +D
Sbjct: 163 LVSCSSDLSIKLWDFGQTYDCLKSLKGHEHTVSSVTFLPTGDFVLSA-SRDHTIKQWDIS 221
Query: 184 SGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLW 243
+G+C+ T DW + ++ S +G SLD V +W + + + L
Sbjct: 222 TGYCVYTFRGHNDW--------VRMIRISNDGTLFASASLDQTVTVWSFATKS-AKLVLR 272
Query: 244 PHQETKAKLKYNCGLELIYPQGKDP------LVISGNDSGSMCVWNV 284
H+ +++ G+ P ++ SG+ S+ WN+
Sbjct: 273 DHEHAVECVEWAPDTAYTNVTGQQPEGNSTHILFSGSRDRSIKAWNI 319
Score = 63.5 bits (153), Expect = 4e-10
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 10/139 (7%)
Query: 104 RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF 163
++L GH P+ + ++ I+ S S D +IK W +G +T+ H+DAV I I
Sbjct: 100 QKLTGHRLPITRVIFHPLWTIMASCSEDATIKVWDYETGQLERTLKGHTDAVNDIAIDAA 159
Query: 164 DSSILSSGSYDGLIRIFD-TESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKS 222
++S S D I+++D ++ CLK+L + +S+V F G F+L S
Sbjct: 160 GKQLVSCSS-DLSIKLWDFGQTYDCLKSLKGHEH--------TVSSVTFLPTGDFVLSAS 210
Query: 223 LDNVVKLWEYTRGTVVRTF 241
D+ +K W+ + G V TF
Sbjct: 211 RDHTIKQWDISTGYCVYTF 229
Score = 57.0 bits (136), Expect = 4e-08
Identities = 46/199 (23%), Positives = 83/199 (41%), Gaps = 38/199 (19%)
Query: 35 QISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
+IS DG L A + + V+ ++ + H+ + C+ W+PD+ +
Sbjct: 240 RISNDGTLFASASLDQTVTVWSFATKSAKLVLRDHEHAVECVEWAPDTAYTNVTGQQPEG 299
Query: 94 EITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSD 153
THI++ S S D SIK W++ +G L T+ AH +
Sbjct: 300 NSTHILF--------------------------SGSRDRSIKAWNINTGDVLFTLLAHEN 333
Query: 154 AVVSIDI-PKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFS 212
V + PK L S + D +R+++ + C+K + + ++ STV F
Sbjct: 334 WVRGLAFHPK--GKYLISVADDKTLRVWELSAQRCMKAIEAHEHFV--------STVAFH 383
Query: 213 RNGKFLLVKSLDNVVKLWE 231
+ F++ S+D K+WE
Sbjct: 384 QTSPFVITGSVDMSCKVWE 402
>YMR116c [T] KOG0279 G protein beta subunit-like protein
Length = 319
Score = 68.9 bits (167), Expect = 9e-12
Identities = 47/185 (25%), Positives = 82/185 (43%), Gaps = 14/185 (7%)
Query: 103 IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPK 162
+R GH+ V G S+S D++++ W V +G + H V+S+DI K
Sbjct: 58 VRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDK 117
Query: 163 FDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKS 222
+S++ SGS D I+++ T G CL TL DW+++ VVP K + ++
Sbjct: 118 -KASMIISGSRDKTIKVW-TIKGQCLATLLGHNDWVSQVRVVP--NEKADDDSVTIISAG 173
Query: 223 LDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVW 282
D +VK W + + F + +N + + L+ S G + +W
Sbjct: 174 NDKMVKAWNLNQFQIEADF----------IGHNSNINTLTASPDGTLIASAGKDGEIMLW 223
Query: 283 NVYSK 287
N+ +K
Sbjct: 224 NLAAK 228
>Hs15150805 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 522
Score = 68.9 bits (167), Expect = 9e-12
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 85 ASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT 143
AS S D + + + ++ GHT V +I ++ G +L S S D ++K W +
Sbjct: 333 ASCSTDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDA 392
Query: 144 ALKTMSAHSDAVVSIDIPKF--------DSSILSSGSYDGLIRIFDTESGHCLKTLTYDK 195
+ + AHS + +I S +L+S S+D +R++D E G C TL +
Sbjct: 393 CVHDLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQ 452
Query: 196 DWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
+ P+ +V FS +GK+L S D V +W G++V ++
Sbjct: 453 E--------PVYSVAFSPDGKYLASGSFDKYVHIWNTQSGSLVHSY 490
Score = 61.2 bits (147), Expect = 2e-09
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 13/150 (8%)
Query: 48 NTDMLVY--EISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IR 104
+TDM ++ + +K H +N + W P +AS S+D T++I + +
Sbjct: 336 STDMCIHVCRLGCDHPVKTFQGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVH 395
Query: 105 RLMGHTAPVISICYN---------NKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
L H+ + +I ++ N +L S+S D +++ W V G T+ H + V
Sbjct: 396 DLQAHSKEIYTIKWSPTGPATSNPNSSIMLASASFDSTVRLWDVEQGVCTHTLMKHQEPV 455
Query: 156 VSIDIPKFDSSILSSGSYDGLIRIFDTESG 185
S+ D L+SGS+D + I++T+SG
Sbjct: 456 YSVAFSP-DGKYLASGSFDKYVHIWNTQSG 484
Score = 53.1 bits (126), Expect = 5e-07
Identities = 58/260 (22%), Positives = 96/260 (36%), Gaps = 51/260 (19%)
Query: 72 INCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMD 131
+ L W+ D +A GS D I L H P+ ++ +N KGN + S+ +D
Sbjct: 238 VTSLDWNSDGTLLAMGSYDGFARIWTENGNLASTLGQHKGPIFALKWNKKGNYVLSAGVD 297
Query: 132 ESIKEWHVLSGTALKTMSAHSDAVVSID-------------------------------- 159
++ W +G A + HS + +D
Sbjct: 298 KTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCRLGCDHPVKTFQG 357
Query: 160 ------IPKFDSS--ILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKF 211
K+D S +L+S S D ++I+ + C+ L I P
Sbjct: 358 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQDACVHDLQAHSKEIYTIKWSPTGPATS 417
Query: 212 SRNGKFLLVK-SLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLV 270
+ N +L S D+ V+LW+ +G T L HQE + ++ P GK +
Sbjct: 418 NPNSSIMLASASFDSTVRLWDVEQGVCTHT-LMKHQEPVYSVAFS-------PDGK--YL 467
Query: 271 ISGNDSGSMCVWNVYSKNLV 290
SG+ + +WN S +LV
Sbjct: 468 ASGSFDKYVHIWNTQSGSLV 487
>Hs14150114 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 315
Score = 68.6 bits (166), Expect = 1e-11
Identities = 56/208 (26%), Positives = 101/208 (47%), Gaps = 24/208 (11%)
Query: 80 DSKCIASGSEDFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWH 138
D+ + SG D V + + G++ R+ GH V ++ +N + ++ S S+D SI+ W
Sbjct: 78 DNSSLCSGGGDKAVVLWDVASGQVVRKFRGHAGKVNTVQFNEEATVILSGSIDSSIRCWD 137
Query: 139 VLSGTA--LKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
S ++T+ D V S+ + D IL+ GS DG +R +D G D
Sbjct: 138 CRSRRPEPVQTLDEARDGVSSVKVS--DHEILA-GSVDGRVRRYDLRMGQLFS------D 188
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNC 256
++ PI+ FSR+G+ LV SLD+ ++L + G ++ + H+ + KL +C
Sbjct: 189 YVGS----PITCTCFSRDGQCTLVSSLDSTLRLLDKDTGELLGEYK-GHKNQEYKL--DC 241
Query: 257 GLELIYPQGKDPLVISGNDSGSMCVWNV 284
L +D V+S ++ G + W++
Sbjct: 242 CL-----SERDTHVVSCSEDGKVFFWDL 264
Score = 54.3 bits (129), Expect = 2e-07
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 102 RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIP 161
R++ L V ++ +N GN + D+++K W+ L GT L+T S H V+
Sbjct: 17 RLKTLDCGQGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSGHGYEVLDA-AG 75
Query: 162 KFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVK 221
FD+S L SG D + ++D SG ++ ++TV+F+ +L
Sbjct: 76 SFDNSSLCSGGGDKAVVLWDVASGQVVRKF--------RGHAGKVNTVQFNEEATVILSG 127
Query: 222 SLDNVVKLWE 231
S+D+ ++ W+
Sbjct: 128 SIDSSIRCWD 137
>ECU02g1400 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 408
Score = 68.6 bits (166), Expect = 1e-11
Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 18/233 (7%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCS 127
H+ + + WSP + S ++ H I+ + GHT V + +++ + CS
Sbjct: 138 HESPVRGMEWSPSGLFLISSDNFGIIKYWHPSMNNIQIIQGHTEAVRDLSFSHNDSKFCS 197
Query: 128 SSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHC 187
+S D +IK W + + H+ V + K+ S I S+G D L++++D +
Sbjct: 198 ASDDSTIKIWDSIEAKEESVLRGHNWDVRAAQWHKYKSLIASAGK-DNLVKMWDPRTAEE 256
Query: 188 LKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQE 247
L TL + K+ I +K+ + +LL D V+K+ + T V T+ +E
Sbjct: 257 LCTLHHHKN--------TILALKWMGDENYLLTGGKDQVIKMVDIRTMTDVFTYKNHKKE 308
Query: 248 TKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNS 300
+ + C ++ +SG G + W Y++ ++ I+E H +
Sbjct: 309 VTSIGTHPCIPDIF---------VSGGTEGGIYFWQAYTQVPLEVIEEGHEGT 352
>CE28600 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 665
Score = 68.6 bits (166), Expect = 1e-11
Identities = 59/228 (25%), Positives = 108/228 (46%), Gaps = 25/228 (10%)
Query: 60 KMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI-THIIYGRIRRLMGHTAPVISICY 118
KM ++ + C D I SG D T++I Y R L GHT V+ + Y
Sbjct: 211 KMTRINCQSENSKGVYCLQYDDDKIVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQY 270
Query: 119 NNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIR 178
+N+ ++ S S D +++ W V +G +KT+ H +AV+ + +F + I+ + S D I
Sbjct: 271 DNR--VIISGSSDATVRVWDVETGECIKTLIHHCEAVLHL---RFANGIMVTCSKDRSIA 325
Query: 179 IFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
++D S + +T + + V + V F + ++++ S D +K+W V
Sbjct: 326 VWDMVSP---RDITIRRVLVGHRAAV--NVVDF--DDRYIVSASGDRTIKVWSMDTLEFV 378
Query: 239 RTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYS 286
RT L H+ A L+Y + LV+SG+ ++ +W+++S
Sbjct: 379 RT-LAGHRRGIACLQY-----------RGRLVVSGSSDNTIRLWDIHS 414
Score = 60.5 bits (145), Expect = 3e-09
Identities = 37/150 (24%), Positives = 78/150 (51%), Gaps = 11/150 (7%)
Query: 39 DGELIAICQNTDMLVYEISSSK---MMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
+G ++ ++ + V+++ S + + ++ H+ +N + + D + I S S D T+++
Sbjct: 312 NGIMVTCSKDRSIAVWDMVSPRDITIRRVLVGHRAAVNVVDF--DDRYIVSASGDRTIKV 369
Query: 96 THI-IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDA 154
+ +R L GH + C +G ++ S S D +I+ W + SG L+ + H +
Sbjct: 370 WSMDTLEFVRTLAGHRRGIA--CLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEEL 427
Query: 155 VVSIDIPKFDSSILSSGSYDGLIRIFDTES 184
V I +FD + SG+YDG I+++D ++
Sbjct: 428 VRCI---RFDEKRIVSGAYDGKIKVWDLQA 454
Score = 50.1 bits (118), Expect = 4e-06
Identities = 42/194 (21%), Positives = 99/194 (50%), Gaps = 21/194 (10%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG 101
+I+ + + V+++ + + +K H E + L ++ + + + S+D ++ + ++
Sbjct: 275 IISGSSDATVRVWDVETGECIKTLIHHCEAVLHLRFA--NGIMVTCSKDRSIAVWDMVSP 332
Query: 102 R---IRR-LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVS 157
R IRR L+GH A V + ++++ + S+S D +IK W + + ++T++ H +
Sbjct: 333 RDITIRRVLVGHRAAVNVVDFDDR--YIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIAC 390
Query: 158 IDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKF 217
+ ++ ++ SGS D IR++D SG CL+ L ++ + ++F K
Sbjct: 391 L---QYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEEL--------VRCIRFDE--KR 437
Query: 218 LLVKSLDNVVKLWE 231
++ + D +K+W+
Sbjct: 438 IVSGAYDGKIKVWD 451
>CE03274 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 430
Score = 68.6 bits (166), Expect = 1e-11
Identities = 49/222 (22%), Positives = 103/222 (46%), Gaps = 17/222 (7%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM---GHTAPVISICYNNKGNI 124
H + +N + + P + SGS D TV++ +++ M PV ++ + G
Sbjct: 169 HVDDVNTVIFHPRDSILISGSNDKTVKLFDFSKTAVKKAMKTLSEVYPVRALSCHPGGEF 228
Query: 125 LCSSSMDESIKEWHVLSGTALKTMSA---HSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
L ++ +++ +++ + A + + H+++V + + ++ + + S DG ++I+D
Sbjct: 229 LLVATDHPTVRLYNIETAQAYASANPDDQHTESVTDVHYSE-NARLYVTASKDGHVKIWD 287
Query: 182 TESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
S C++T A DG I + KF++NGK++L +D++VKLWE + + +
Sbjct: 288 GVSNRCVETFKR-----AHDGS-SICSAKFTKNGKYILTSGMDSIVKLWELSTNRCLIVY 341
Query: 242 LWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWN 283
N + +D ++ SGSMC W+
Sbjct: 342 TGAGATGAQDFATNAS----FNHNEDYVLFPDEKSGSMCSWD 379
>7300706 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 510
Score = 68.6 bits (166), Expect = 1e-11
Identities = 62/255 (24%), Positives = 112/255 (43%), Gaps = 33/255 (12%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C DG++++ ++ + +++ + + +K H + CL + D K I SGS D TV
Sbjct: 215 CLQYDDGKIVSGLRDNTIKIWDRTDLQCVKTLMGHTGSVLCLQY--DDKVIISGSSDSTV 272
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG---TALKTMS 149
+ + G + L+ H V+ + +NN + CS D SI W + S T + +
Sbjct: 273 RVWDVNTGEMVNTLIHHCEAVLHLRFNNGMMVTCSK--DRSIAVWDMTSPSEITLRRVLV 330
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
H AV +D FD + S S D I+++ T S ++TL K IA
Sbjct: 331 GHRAAVNVVD---FDEKYIVSASGDRTIKVWSTSSCEFVRTLNGHKRGIA---------- 377
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL 269
+ ++ S DN ++LW+ G +R L H+E ++++
Sbjct: 378 CLQYRDRLVVSGSSDNSIRLWDIECGACLRV-LEGHEELVRCIRFD-----------TKR 425
Query: 270 VISGNDSGSMCVWNV 284
++SG G + VW++
Sbjct: 426 IVSGAYDGKIKVWDL 440
>At5g08390 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 823
Score = 68.2 bits (165), Expect = 2e-11
Identities = 42/176 (23%), Positives = 85/176 (47%), Gaps = 11/176 (6%)
Query: 68 HKECINCL-CWSPDSKCIASGSEDFTVEITHIIY-GRIRRLMGHTAPVISICYNNKGNIL 125
H +NCL S+ + +G ED V + I I L GH++ + S+ ++ ++
Sbjct: 108 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEGLV 167
Query: 126 CSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESG 185
+ + +IK W + ++T++ H VS++ F +SGS D ++I+D
Sbjct: 168 AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPF-GEFFASGSLDTNLKIWDIRKK 226
Query: 186 HCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
C+ T + ++ ++F+ +G++++ DNVVK+W+ T G ++ F
Sbjct: 227 GCIHTY--------KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEF 274
Score = 51.6 bits (122), Expect = 2e-06
Identities = 35/147 (23%), Positives = 70/147 (46%), Gaps = 2/147 (1%)
Query: 39 DGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI 98
+G + A + + ++++ +K+++ T H+ + + P + ASGS D ++I I
Sbjct: 164 EGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDI 223
Query: 99 -IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVS 157
G I GHT V + + G + S D +K W + +G L +H + S
Sbjct: 224 RKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKSHEGKIQS 283
Query: 158 IDIPKFDSSILSSGSYDGLIRIFDTES 184
+D + +L++GS D ++ +D E+
Sbjct: 284 LDFHPHE-FLLATGSADKTVKFWDLET 309
Score = 51.6 bits (122), Expect = 2e-06
Identities = 36/167 (21%), Positives = 77/167 (45%), Gaps = 14/167 (8%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILC 126
H I+ + + +A+G+ T+++ + ++ R L GH + +S+ ++ G
Sbjct: 151 HSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFA 210
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF--DSSILSSGSYDGLIRIFDTES 184
S S+D ++K W + + T H+ V ++ +F D + SG D +++++D +
Sbjct: 211 SGSLDTNLKIWDIRKKGCIHTYKGHTRGV---NVLRFTPDGRWIVSGGEDNVVKVWDLTA 267
Query: 185 GHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
G L ++ + +G I ++ F + L S D VK W+
Sbjct: 268 GKLL------HEFKSHEG--KIQSLDFHPHEFLLATGSADKTVKFWD 306
>7300458 [R] KOG0275 Conserved WD40 repeat-containing protein
Length = 486
Score = 68.2 bits (165), Expect = 2e-11
Identities = 61/262 (23%), Positives = 115/262 (43%), Gaps = 34/262 (12%)
Query: 69 KECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTA---------PVISICYN 119
K + C +SPD + + +GS D +E+ + G++R+ + + A V+++ ++
Sbjct: 191 KSHVECAQFSPDGQYLITGSVDGFLEVWNFTTGKVRKDLKYQAQDQFMMMEQAVLALNFS 250
Query: 120 NKGNILCSSSMDESIKEWHVLSGTAL-KTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIR 178
++ S + D IK W +++G L K AH+ + + + +S +LS+ S+D +R
Sbjct: 251 RDSEMVASGAQDGQIKVWRIITGQCLRKFEKAHTKGITCLQFSRDNSQVLSA-SFDYTVR 309
Query: 179 IFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
+ +SG LK ++ E F+ +G +L S D VK+W V
Sbjct: 310 LHGLKSGKMLKEFKGHSSFVNE--------ATFTPDGHSVLSASSDGTVKVWSLKTTECV 361
Query: 239 RTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHR 298
T+ + +L N LI P+ + ++ N S ++ + N+ + + K
Sbjct: 362 ATY----KPLGNELAVN--TVLILPKNPEHFIVC-NRSNTVVIMNMQGQIVRSFSSGKRE 414
Query: 299 NSPLISISASYDKVATLSLNGE 320
IS ATLS GE
Sbjct: 415 GGAFIS--------ATLSPRGE 428
>7296209 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 700
Score = 68.2 bits (165), Expect = 2e-11
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 17/170 (10%)
Query: 81 SKCIASGSEDFTVEITHI-IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV 139
++ AS S D + + + + I+ GHT V +I + +G +L S S D ++K W +
Sbjct: 504 NQAFASCSTDQRIHVCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSM 563
Query: 140 LSGTALKTMSAHSDAVVSIDIPKFDSS--------ILSSGSYDGLIRIFDTESGHCLKTL 191
+ AHS + +I IL+S S+D +R++D E G C+ TL
Sbjct: 564 NRDRCCHDLQAHSKEIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTL 623
Query: 192 TYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
T + P+ +V FS +GK L S D V +W G +V ++
Sbjct: 624 TKHTE--------PVYSVAFSPDGKHLASGSFDKCVHIWSTQTGQLVHSY 665
Score = 61.2 bits (147), Expect = 2e-09
Identities = 38/143 (26%), Positives = 72/143 (49%), Gaps = 11/143 (7%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTA 111
V + ++ +K H +N + W P + +AS S+D T++I + R L H+
Sbjct: 518 VCRLGVNEPIKTFKGHTNEVNAIKWCPQGQLLASCSDDMTLKIWSMNRDRCCHDLQAHSK 577
Query: 112 PVISICYN---------NKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPK 162
+ +I ++ N IL S+S D +++ W V G+ + T++ H++ V S+
Sbjct: 578 EIYTIKWSPTGPGTNNPNTNLILASASFDSTVRLWDVERGSCIHTLTKHTEPVYSVAFSP 637
Query: 163 FDSSILSSGSYDGLIRIFDTESG 185
D L+SGS+D + I+ T++G
Sbjct: 638 -DGKHLASGSFDKCVHIWSTQTG 659
Score = 49.7 bits (117), Expect = 6e-06
Identities = 37/152 (24%), Positives = 66/152 (43%), Gaps = 21/152 (13%)
Query: 102 RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT--ALKTMSAHSDAVVSID 159
+ R L GH + V +N ++L S S D + + W + + + + H +
Sbjct: 347 KARVLRGHESEVFICAWNPSRDLLASGSGDSTARIWDMSDANTNSNQLVLRHCIQKGGAE 406
Query: 160 IPK----------FDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
+P D S+L++GSYDG RI+ T+ G TL K PI +
Sbjct: 407 VPSNKDVTSLDWNCDGSLLATGSYDGYARIWKTD-GRLASTLGQHKG--------PIFAL 457
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
K+++ G ++L +D +W+ + G + F
Sbjct: 458 KWNKCGNYILSAGVDKTTIIWDASTGQCTQQF 489
>7299285 [R] KOG4155 FOG: WD40 repeat
Length = 331
Score = 67.8 bits (164), Expect = 2e-11
Identities = 49/183 (26%), Positives = 89/183 (47%), Gaps = 5/183 (2%)
Query: 20 DKQVLPASGKIST-SCQISPDGELIAICQNTDML-VYEISSSKMMK-LTTTHKECINCLC 76
DK+ L + G + + Q SP + + N + +Y + + K + L + + +
Sbjct: 118 DKKHLLSFGPVDLWTVQFSPCNKYVISGLNDGKISMYSVETGKAEQTLDAQNGKYTLSIA 177
Query: 77 WSPDSKCIASGSEDFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSMDESIK 135
+SPD K IASG+ D + I + G++ + L GH PV S+C++ +L ++S D +K
Sbjct: 178 YSPDGKYIASGAIDGIITIFDVAAGKVVQTLEGHAMPVRSLCFSPNSQLLLTASDDGHMK 237
Query: 136 EWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDK 195
+ V + T+S H+ V+ + + D +S S D ++I+DT CL T
Sbjct: 238 LYDVTHSDVVGTLSGHASWVLCVAFSE-DGKHFASSSSDNSVKIWDTSERKCLHTFAEHT 296
Query: 196 DWI 198
D +
Sbjct: 297 DQV 299
Score = 67.4 bits (163), Expect = 3e-11
Identities = 55/238 (23%), Positives = 109/238 (45%), Gaps = 13/238 (5%)
Query: 33 SCQISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDF 91
S +S DG+ IA ++ M +++ S L + + + +SP +K + SG D
Sbjct: 90 SVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLLSFGPVDLWTVQFSPCNKYVISGLNDG 149
Query: 92 TVEITHIIYGRIRRLMG--HTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMS 149
+ + + G+ + + + +SI Y+ G + S ++D I + V +G ++T+
Sbjct: 150 KISMYSVETGKAEQTLDAQNGKYTLSIAYSPDGKYIASGAIDGIITIFDVAAGKVVQTLE 209
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
H+ V S+ +S +L + S DG ++++D + TL+ W+ V
Sbjct: 210 GHAMPVRSLCFSP-NSQLLLTASDDGHMKLYDVTHSDVVGTLSGHASWVL--------CV 260
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKD 267
FS +GK S DN VK+W+ + + TF H + ++Y+ G + + +D
Sbjct: 261 AFSEDGKHFASSSSDNSVKIWDTSERKCLHTFA-EHTDQVWGVRYSPGNDKVASASED 317
Score = 59.3 bits (142), Expect = 7e-09
Identities = 47/202 (23%), Positives = 98/202 (48%), Gaps = 25/202 (12%)
Query: 89 EDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM 148
ED T+++ H +L GH V+S+ ++ G + SSS+D ++ W SG +
Sbjct: 71 EDNTLKLRH-------KLKGHALGVVSVAVSSDGQTIASSSLDSTMCLWDARSGDKKHLL 123
Query: 149 SAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPIST 208
S + ++ + ++ SG DG I ++ E+G +TL A++G +S
Sbjct: 124 SFGPVDLWTVQFSPCNKYVI-SGLNDGKISMYSVETGKAEQTLD------AQNGKYTLS- 175
Query: 209 VKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDP 268
+ +S +GK++ ++D ++ +++ G VV+T L H L ++ +L+
Sbjct: 176 IAYSPDGKYIASGAIDGIITIFDVAAGKVVQT-LEGHAMPVRSLCFSPNSQLL------- 227
Query: 269 LVISGNDSGSMCVWNVYSKNLV 290
++ +D G M +++V ++V
Sbjct: 228 --LTASDDGHMKLYDVTHSDVV 247
>Hs4557491 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 431
Score = 67.4 bits (163), Expect = 3e-11
Identities = 47/179 (26%), Positives = 92/179 (51%), Gaps = 14/179 (7%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAP---VISICYNNKGNI 124
H + + CL + P + +ASGS D+T+++ +R + + SI ++ G+
Sbjct: 172 HVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDF 231
Query: 125 LCSSSMDESIKEWHVLSG---TALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
+ + +++ + + + + H+DA+ S++ +++ +GS DG I+++D
Sbjct: 232 ILVGTQHPTLRLYDINTFQCFVSCNPQDQHTDAICSVNYNS-SANMYVTGSKDGCIKLWD 290
Query: 182 TESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG-TVVR 239
S C+ T ++K A DG S + FS+N K++L D+V KLWE + G T+VR
Sbjct: 291 GVSNRCITT--FEK---AHDGAEVCSAI-FSKNSKYILSSGKDSVAKLWEISTGRTLVR 343
>CE07020 [R] KOG0288 WD40 repeat protein TipD
Length = 578
Score = 67.4 bits (163), Expect = 3e-11
Identities = 69/291 (23%), Positives = 123/291 (41%), Gaps = 47/291 (16%)
Query: 48 NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEIT----HIIYGRI 103
N D+L+ + S+ + + +N + W D + A+G D ++I H Y RI
Sbjct: 271 NGDLLLGDSVPSRAEFVLECEEGEVNDVHWL-DGETFATGGSDRNIKIWKVDGHGGYTRI 329
Query: 104 RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF 163
L G A I Y +SS D++++ W++ + L T+S HSD V + +
Sbjct: 330 GTLAGSNAAFTRIDYERDRKHFIASSNDKNVRIWNLDNSRLLSTLSGHSDQVTCVKFYQS 389
Query: 164 DSSILSSGSYDGLIRIFDTESGHCLKTL-----------------------TYDKDWIAE 200
S++ SGS D +I+I+D ++ C ++L +DK
Sbjct: 390 HSAV--SGSADRVIKIWDIQNQRCSRSLFPASKVLDVATNMGASPSLFASGHFDKKLRFY 447
Query: 201 DG--VVPISTVKF---------SRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETK 249
DG P+ TV + +G LLV + D+ + L + +RTF H +
Sbjct: 448 DGRSTDPVRTVDMGGRITSLDVTMSGCELLVSTRDDTISLID------LRTFQTVHCYSA 501
Query: 250 AKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNS 300
+ + L + + V +G+ +GS+ VWN S L +++ N+
Sbjct: 502 ENYRTSSDLSRVVLSSGNEYVAAGSSNGSIFVWNRNSTKLEKQLCSNSENA 552
>SPCC18.05c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 502
Score = 67.0 bits (162), Expect = 4e-11
Identities = 46/159 (28%), Positives = 77/159 (47%), Gaps = 14/159 (8%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI--RRLMGHTAPVISICY------- 118
H ++C+ W+PD+ IA+GS D T+ G L HT P++++C+
Sbjct: 176 HTNWVSCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMALCWQPLHLAP 235
Query: 119 NNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIR 178
++ +L S S D +++ W+V T L T+S H+ + + + + S SYD IR
Sbjct: 236 DSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG--GQNWIYSSSYDKTIR 293
Query: 179 IFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKF 217
I+D + G CL L K A + +ST R+G +
Sbjct: 294 IWDAKDGKCLHIL---KGHAARVNHLSLSTEHVLRSGAY 329
Score = 60.8 bits (146), Expect = 3e-09
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 33 SCQISPDGELIAICQNTDMLVYEIS-SSKMMKLTTTHKECINCLCWSPDSKCIASGSEDF 91
+C L++ + +++++ S+K + H++ +N +SPD +CIA+ S D
Sbjct: 352 ACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPDGRCIATASFDS 411
Query: 92 TVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSA 150
+V + G+ + L GH A V ++ +L SSS D ++K W V S +
Sbjct: 412 SVRLWDGKTGKFLATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLKVWDVRSKKMKFDLPG 471
Query: 151 HSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
H D V ++D D ++SG D +RI+
Sbjct: 472 HEDQVFAVDWSP-DGQRVASGGADKAVRIW 500
Score = 49.3 bits (116), Expect = 8e-06
Identities = 41/187 (21%), Positives = 83/187 (43%), Gaps = 25/187 (13%)
Query: 147 TMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPI 206
+M+ H ++S SS L +GS D R++D ++ + T+ +W +
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNW--------V 180
Query: 207 STVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLEL-IYPQG 265
S V ++ + + S+DN ++ W+ +G+ + L H + L C L + P
Sbjct: 181 SCVAWAPDASIIATGSMDNTIRFWDPKKGSPIGDALRRHTKPIMAL---CWQPLHLAPDS 237
Query: 266 KDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISI---------SASYDKVATL- 315
L+ SG+ ++ +WNV + L+ + +P+ + S+SYDK +
Sbjct: 238 GPYLLASGSKDNTVRIWNVKLRTLLFTL--SGHTAPITCVRWGGQNWIYSSSYDKTIRIW 295
Query: 316 -SLNGEC 321
+ +G+C
Sbjct: 296 DAKDGKC 302
>Hs8923881 [R] KOG0266 WD40 repeat-containing protein
Length = 404
Score = 67.0 bits (162), Expect = 4e-11
Identities = 49/185 (26%), Positives = 100/185 (53%), Gaps = 8/185 (4%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCI-ASGSEDFTVEITHII-YGR-IRRLMGH 109
++E+ + ++ + H++ + L ++P I S S D T+ I + +G+ I+ L GH
Sbjct: 137 IWEVQTGLLLLNLSGHQDVVRDLSFTPSGSLILVSASRDKTLRIWDLNKHGKQIQVLSGH 196
Query: 110 TAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILS 169
V + ++LCS++ ++S+ W + S T ++ + H +VVS D DS++L
Sbjct: 197 LQWVYCCSISPDCSMLCSAAGEKSVFLWSMRSYTLIRKLEGHQSSVVSCDFSP-DSALLV 255
Query: 170 SGSYDGLIRIFDTESGHCLKTLTYDK-DWIAEDGVVPISTVK---FSRNGKFLLVKSLDN 225
+ SYD + ++D +G L++L + + D +D V IS+++ FS G +L + D
Sbjct: 256 TASYDTNVIMWDPYTGERLRSLHHTQVDPAMDDSDVHISSLRSVCFSPEGLYLATVADDR 315
Query: 226 VVKLW 230
++++W
Sbjct: 316 LLRIW 320
>CE18408 [R] KOG4155 FOG: WD40 repeat
Length = 1101
Score = 67.0 bits (162), Expect = 4e-11
Identities = 51/210 (24%), Positives = 95/210 (44%), Gaps = 14/210 (6%)
Query: 31 STSCQISPDGELIAICQNTD----MLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIAS 86
+T +S + + I I N + Y I+S +++ H + CLC S DS S
Sbjct: 378 NTVLTLSANHQYILISGNQSDPGVIYAYHIASEQLIGTFKGHTAAVTCLCSSNDSSLFVS 437
Query: 87 GSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTAL 145
S D TV + L HTA V + L ++S D S K + +G +
Sbjct: 438 TSFDKTVNVWVFSQSTPTMSLTHHTAKVTCAILTSDDQYLITASADSSAKMIKLETGEVM 497
Query: 146 KTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP 205
++ + H+ +VVS+ + ++ L +GS D +++++D +G C+ + + P
Sbjct: 498 RSFNDHTGSVVSLQLTS-NNQFLITGSGDFVVQMWDVTNGKCISRM--------GGLMAP 548
Query: 206 ISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
+ST+ + N F++V D +K++ G
Sbjct: 549 VSTLAITSNDAFVVVACEDETLKVFSTVGG 578
Score = 51.2 bits (121), Expect = 2e-06
Identities = 54/293 (18%), Positives = 118/293 (39%), Gaps = 20/293 (6%)
Query: 27 SGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIAS 86
+ K++ + S D LI ++ + ++ + ++M+ H + L + +++ + +
Sbjct: 462 TAKVTCAILTSDDQYLITASADSSAKMIKLETGEVMRSFNDHTGSVVSLQLTSNNQFLIT 521
Query: 87 GSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTAL 145
GS DF V++ + G+ I R+ G APV ++ + + + DE++K + + G L
Sbjct: 522 GSGDFVVQMWDVTNGKCISRMGGLMAPVSTLAITSNDAFVVVACEDETLKVFSTVGGQEL 581
Query: 146 KTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP 205
+ H V S+ + D + ++ + +D +G + L + + P
Sbjct: 582 HELMGHEGKVNSLVCAQDDCQLFAATK--SKVFCYDIHNGQMIDVLDTAQPF-------P 632
Query: 206 ISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQG 265
I ++K S + F L+ V +W T+ H L +
Sbjct: 633 ICSLKISSDNYF-LISPCGPKVTIWNVTKRN--------HDAHDVHADKEGFLTAVALSN 683
Query: 266 KDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLN 318
D G ++G + +W++ V + ++ P+ I S D +S N
Sbjct: 684 DDKYAACGTNNGIVALWDLEVCQCVFTTIQ-NKGDPITCIRYSVDSQYCISGN 735
>At5g23430 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 922
Score = 67.0 bits (162), Expect = 4e-11
Identities = 41/176 (23%), Positives = 85/176 (48%), Gaps = 11/176 (6%)
Query: 68 HKECINCL-CWSPDSKCIASGSEDFTVEITHIIY-GRIRRLMGHTAPVISICYNNKGNIL 125
H +NCL S+ + +G ED V + I I L GH++ + S+ ++ ++
Sbjct: 15 HSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGIDSVTFDASEVLV 74
Query: 126 CSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESG 185
+ + +IK W + ++T++ H +S+D F +SGS D ++I+D
Sbjct: 75 AAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPF-GEFFASGSLDTNLKIWDIRKK 133
Query: 186 HCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
C+ T + ++ ++F+ +G++++ DN+VK+W+ T G ++ F
Sbjct: 134 GCIHTY--------KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEF 181
Score = 52.8 bits (125), Expect = 7e-07
Identities = 40/167 (23%), Positives = 79/167 (46%), Gaps = 14/167 (8%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILC 126
H I+ + + +A+G+ T+++ + +I R L GH + IS+ ++ G
Sbjct: 58 HSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFA 117
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF--DSSILSSGSYDGLIRIFDTES 184
S S+D ++K W + + T H+ V ++ +F D + SG D +++++D +
Sbjct: 118 SGSLDTNLKIWDIRKKGCIHTYKGHTRGV---NVLRFTPDGRWVVSGGEDNIVKVWDLTA 174
Query: 185 GHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
G K LT ++ + +G I ++ F + L S D VK W+
Sbjct: 175 G---KLLT---EFKSHEG--QIQSLDFHPHEFLLATGSADRTVKFWD 213
Score = 50.8 bits (120), Expect = 3e-06
Identities = 33/133 (24%), Positives = 64/133 (47%), Gaps = 2/133 (1%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI-IYGRIRRLMGHTA 111
++++ +K+++ T H+ + + P + ASGS D ++I I G I GHT
Sbjct: 85 LWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTR 144
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
V + + G + S D +K W + +G L +H + S+D + +L++G
Sbjct: 145 GVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHE-FLLATG 203
Query: 172 SYDGLIRIFDTES 184
S D ++ +D E+
Sbjct: 204 SADRTVKFWDLET 216
>Hs4502477 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 569
Score = 66.6 bits (161), Expect = 5e-11
Identities = 58/255 (22%), Positives = 116/255 (44%), Gaps = 33/255 (12%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C D ++++ ++ + +++ ++ + ++ T H + CL + D + I +GS D TV
Sbjct: 272 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTV 329
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTAL---KTMS 149
+ + G + L+ H V+ + +NN + CS D SI W + S T + + +
Sbjct: 330 RVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK--DRSIAVWDMASPTDITLRRVLV 387
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
H AV +D FD + S S D I++++T + ++TL K IA
Sbjct: 388 GHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA---------- 434
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL 269
+ ++ S DN ++LW+ G +R L H+E ++++ +
Sbjct: 435 CLQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRFD-----------NKR 482
Query: 270 VISGNDSGSMCVWNV 284
++SG G + VW++
Sbjct: 483 IVSGAYDGKIKVWDL 497
>Hs21071067 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 800
Score = 66.6 bits (161), Expect = 5e-11
Identities = 58/236 (24%), Positives = 105/236 (43%), Gaps = 18/236 (7%)
Query: 41 ELIAICQNTDMLVYEISSSKM---MKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITH 97
+L I + +D ++ I K +K+ H + +SPD + S SED TV +
Sbjct: 512 DLSLIDKESDDVLERIMDEKTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWS 571
Query: 98 I-IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVV 156
+ + + GH PV ++ G S D + W L+ + H +
Sbjct: 572 LQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSGGHDRVARLWATDHYQPLRIFAGH---LA 628
Query: 157 SIDIPKF--DSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRN 214
++ +F +S+ +++GS D +R++D +G+C++ T K PI ++ FS N
Sbjct: 629 DVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKG--------PIHSLTFSPN 680
Query: 215 GKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLV 270
G+FL + D V LW+ G +V L H +T L+++ E++ D V
Sbjct: 681 GRFLATGATDGRVLLWDIGHGLMVGE-LKGHTDTVCSLRFSRDGEILASGSMDNTV 735
Score = 60.1 bits (144), Expect = 4e-09
Identities = 34/132 (25%), Positives = 65/132 (48%), Gaps = 9/132 (6%)
Query: 100 YGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID 159
Y +R GH A V ++ N + + S D +++ W VL+G ++ + H + S+
Sbjct: 617 YQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLT 676
Query: 160 IPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLL 219
+ L++G+ DG + ++D G + L D + +++FSR+G+ L
Sbjct: 677 FSP-NGRFLATGATDGRVLLWDIGHGLMVGELKGHTD--------TVCSLRFSRDGEILA 727
Query: 220 VKSLDNVVKLWE 231
S+DN V+LW+
Sbjct: 728 SGSMDNTVRLWD 739
Score = 55.5 bits (132), Expect = 1e-07
Identities = 34/122 (27%), Positives = 65/122 (52%), Gaps = 2/122 (1%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG-RIRRLMGHTA 111
++++ + +++ T HK I+ L +SP+ + +A+G+ D V + I +G + L GHT
Sbjct: 653 LWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTD 712
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
V S+ ++ G IL S SMD +++ W + + A I++P+ +S L G
Sbjct: 713 TVCSLRFSRDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPE-NSQELLLG 771
Query: 172 SY 173
+Y
Sbjct: 772 TY 773
>Hs16117783 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 605
Score = 66.6 bits (161), Expect = 5e-11
Identities = 58/255 (22%), Positives = 116/255 (44%), Gaps = 33/255 (12%)
Query: 34 CQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
C D ++++ ++ + +++ ++ + ++ T H + CL + D + I +GS D TV
Sbjct: 308 CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTV 365
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTAL---KTMS 149
+ + G + L+ H V+ + +NN + CS D SI W + S T + + +
Sbjct: 366 RVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSK--DRSIAVWDMASPTDITLRRVLV 423
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
H AV +D FD + S S D I++++T + ++TL K IA
Sbjct: 424 GHRAAVNVVD---FDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA---------- 470
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL 269
+ ++ S DN ++LW+ G +R L H+E ++++ +
Sbjct: 471 CLQYRDRLVVSGSSDNTIRLWDIECGACLRV-LEGHEELVRCIRFD-----------NKR 518
Query: 270 VISGNDSGSMCVWNV 284
++SG G + VW++
Sbjct: 519 IVSGAYDGKIKVWDL 533
>CE18578 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 66.6 bits (161), Expect = 5e-11
Identities = 49/211 (23%), Positives = 97/211 (45%), Gaps = 23/211 (10%)
Query: 77 WSPDSKCIASGSEDFTVEITHIIYGRIRR---LMGHTAPVISICYNNKGNILCSSSMDES 133
+SPD C+A+ D + ++ YG + GH+ V+ + + + L S D+S
Sbjct: 46 FSPDGTCLATSGYDQKIFFWNV-YGECENFSTIKGHSGAVMDLKFTTDSSSLVSCGTDKS 104
Query: 134 IKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTY 193
++ W + +GT + H+D V ++ + ++++S S DG R+ D + +KT T
Sbjct: 105 VRVWDMETGTCARRFRTHTDFVNAVHPSRRGVTLVASASDDGTCRVHDMRTKEPVKTYTN 164
Query: 194 DKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLK 253
A V F+ + ++ +DNV+K+W+ R + T L H++T +
Sbjct: 165 RYQQTA---------VTFNDSSDQVISGGIDNVLKVWDMRRDEITYT-LTGHRDTITGIS 214
Query: 254 YNCGLELIYPQGKDPLVISGNDSGSMCVWNV 284
+ P GK +IS + ++ W++
Sbjct: 215 -------LSPSGK--FIISNSMDCTVRQWDI 236
>At1g61210 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 282
Score = 66.6 bits (161), Expect = 5e-11
Identities = 47/188 (25%), Positives = 87/188 (46%), Gaps = 25/188 (13%)
Query: 68 HKECINCLC-WSPDSKCIASGSEDFTVEITHIIYGRIRRLM-------------GHTAPV 113
H +NCL S+ +G +D+ V + I G+ LM GHT+ V
Sbjct: 34 HSANVNCLSIGKKTSRLFITGGDDYKVNLWAI--GKPTSLMKNDAIAFYWQSLCGHTSAV 91
Query: 114 ISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSY 173
S+ +++ ++ + + IK W V ++ + H +++ F L+SGS
Sbjct: 92 DSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPF-GEFLASGSS 150
Query: 174 DGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYT 233
D ++I+D C++T I ST++F+ +G++++ LDNVVK+W+ T
Sbjct: 151 DANLKIWDIRKKGCIQTYKGHSRGI--------STIRFTPDGRWVVSGGLDNVVKVWDLT 202
Query: 234 RGTVVRTF 241
G ++ F
Sbjct: 203 AGKLLHEF 210
Score = 57.0 bits (136), Expect = 4e-08
Identities = 33/133 (24%), Positives = 68/133 (50%), Gaps = 2/133 (1%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIY-GRIRRLMGHTA 111
++++ +KM++ T H+ + + + P + +ASGS D ++I I G I+ GH+
Sbjct: 114 LWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKGHSR 173
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
+ +I + G + S +D +K W + +G L H + S+D + +L++G
Sbjct: 174 GISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLE-FLLATG 232
Query: 172 SYDGLIRIFDTES 184
S D ++ +D E+
Sbjct: 233 SADRTVKFWDLET 245
>SPAC4D7.03 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 703
Score = 66.2 bits (160), Expect = 6e-11
Identities = 45/160 (28%), Positives = 77/160 (48%), Gaps = 15/160 (9%)
Query: 84 IASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG 142
+ SGS D ++ I + G + L GH+ + S+ Y + NI S SMD+SI+ W + +G
Sbjct: 520 LVSGSYDSSIRIWRVSTGECLYHLRGHSLRIYSVLYEPERNICISGSMDKSIRVWDLSTG 579
Query: 143 TALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDG 202
T + H V +++ F + ++ SGS D IRI+D +G L L + +I+
Sbjct: 580 TCKYVLEGHDAFVTLLNV--FQNRLI-SGSADSTIRIWDLNTGKPLMVLPSNSGYISS-- 634
Query: 203 VVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFL 242
+ + ++ D VKLW+ G ++R L
Sbjct: 635 ---------FVSDEHKIISGNDGSVKLWDVRTGKLLRFLL 665
Score = 62.4 bits (150), Expect = 9e-10
Identities = 69/274 (25%), Positives = 110/274 (39%), Gaps = 61/274 (22%)
Query: 53 VYEISSSKMMKLTTTHKECINCL--------------CWSPDSKCIASGSEDFTVEITHI 98
V+ I +K + H I CL PD I SGS D T+ + +
Sbjct: 415 VWNIEKAKCTHIFRGHISIIRCLEILVPSRLIRHGVEIVEPDQPYIVSGSRDHTLRVWKL 474
Query: 99 IYGR---------------------IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEW 137
+ L+GHT V +I + G+IL S S D SI+ W
Sbjct: 475 PKNTDPPYLPDNTNSIDRWEKNPYFVHTLIGHTDSVRTI--SGYGDILVSGSYDSSIRIW 532
Query: 138 HVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDW 197
V +G L + HS + S+ + + + +I SGS D IR++D +G C L
Sbjct: 533 RVSTGECLYHLRGHSLRIYSV-LYEPERNICISGSMDKSIRVWDLSTGTCKYVLE----- 586
Query: 198 IAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCG 257
D V + V +R L+ S D+ +++W+ G + L N G
Sbjct: 587 -GHDAFVTLLNVFQNR----LISGSADSTIRIWDLNTGKPLMV-----------LPSNSG 630
Query: 258 LELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQ 291
+ + +ISGND GS+ +W+V + L++
Sbjct: 631 YISSFVSDEHK-IISGND-GSVKLWDVRTGKLLR 662
>YCR057c [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 923
Score = 65.9 bits (159), Expect = 8e-11
Identities = 58/264 (21%), Positives = 113/264 (41%), Gaps = 24/264 (9%)
Query: 36 ISPDGELIAICQNT--DMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
++ GE +A + +LVYE S + H + N L +SPD + + SED +
Sbjct: 310 VNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGKI 369
Query: 94 EITHIIYG-RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
++ I G + HT+ V ++ + +G ++ SSS+D +++ W ++ +T +
Sbjct: 370 KVWDITSGFCLATFEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTE 429
Query: 153 DAVVSIDIPKFDSSILSSGSYDGL-IRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKF 211
+ ++ +GS D I ++ ++G L L+ +G P+S + F
Sbjct: 430 RIQFNCLAVDPSGEVVCAGSLDNFDIHVWSVQTGQLLDALS------GHEG--PVSCLSF 481
Query: 212 SRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLEL-IYPQGKDPLV 270
S+ L S D +++W + Q+ + Y+ L L + P GK+ V
Sbjct: 482 SQENSVLASASWDKTIRIW---------SIFGRSQQVEPIEVYSDVLALSMRPDGKE--V 530
Query: 271 ISGNDSGSMCVWNVYSKNLVQKID 294
G + ++N+ V ID
Sbjct: 531 AVSTLKGQISIFNIEDAKQVGNID 554
Score = 56.2 bits (134), Expect = 6e-08
Identities = 47/227 (20%), Positives = 105/227 (45%), Gaps = 23/227 (10%)
Query: 103 IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPK 162
I + GH S+ Y+ G+ + ++S D IK W + SG L T H+ +V ++ K
Sbjct: 338 ILKQQGHFDSTNSLAYSPDGSRVVTASEDGKIKVWDITSGFCLATFEEHTSSVTAVQFAK 397
Query: 163 FDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKS 222
++ S S DG +R +D +T T + + + + +G+ + S
Sbjct: 398 -RGQVMFSSSLDGTVRAWDLIRYRNFRTFTGTER-------IQFNCLAVDPSGEVVCAGS 449
Query: 223 LDNV-VKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCV 281
LDN + +W G ++ L H+ + L ++ ++ ++ S + ++ +
Sbjct: 450 LDNFDIHVWSVQTGQLLDA-LSGHEGPVSCLSFS---------QENSVLASASWDKTIRI 499
Query: 282 WNVYSKNLVQKIDEKHRNSPLISISASYD--KVATLSLNGECNLFRV 326
W+++ ++ Q+++ S ++++S D +VA +L G+ ++F +
Sbjct: 500 WSIFGRS--QQVEPIEVYSDVLALSMRPDGKEVAVSTLKGQISIFNI 544
>At1g79990 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 913
Score = 65.9 bits (159), Expect = 8e-11
Identities = 59/236 (25%), Positives = 101/236 (42%), Gaps = 28/236 (11%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI--RRLMGHT 110
VY ++ +K+ H + I C+ P + S S+D +++ G + + GH+
Sbjct: 76 VYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHS 135
Query: 111 APVISICYNNKG-NILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID-IPKFDSSIL 168
V+ + +N K N S+S+D +IK W++ S T+ AH V +D D L
Sbjct: 136 HYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYL 195
Query: 169 SSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
+GS D +++D ++ C++TL E +S V F ++ S D V+
Sbjct: 196 ITGSDDHTAKVWDYQTKSCVQTL--------EGHTHNVSAVSFHPELPIIITGSEDGTVR 247
Query: 229 LWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGK---DPLVISGNDSGSMCV 281
+W T + T N GLE ++ G V+ G D GS+ V
Sbjct: 248 IWHATTYRLENTL-------------NYGLERVWAIGHIKGSRRVVIGYDEGSIMV 290
>YIL046w [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 640
Score = 65.5 bits (158), Expect = 1e-10
Identities = 42/161 (26%), Positives = 84/161 (52%), Gaps = 15/161 (9%)
Query: 82 KCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVL 140
+ + +GS D T+ I + G+ IRRL GH+ V ++ ++++ L + S+D++I+ W+ +
Sbjct: 313 RLLFTGSYDSTIGIWDLFTGKLIRRLSGHSDGVKTLYFDDRK--LITGSLDKTIRVWNYI 370
Query: 141 SGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAE 200
+G + T HSD+V+S+D + ++ SGS D ++++ ES C TL +W
Sbjct: 371 TGECISTYRGHSDSVLSVDSYQ---KVIVSGSADKTVKVWHVESRTCY-TLRGHTEW--- 423
Query: 201 DGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
++ VK S D +++W+ + ++ F
Sbjct: 424 -----VNCVKLHPKSFSCFSCSDDTTIRMWDIRTNSCLKVF 459
Score = 54.3 bits (129), Expect = 2e-07
Identities = 67/264 (25%), Positives = 110/264 (41%), Gaps = 40/264 (15%)
Query: 70 ECINCLCWSPDS--------KCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNK 121
ECI+ DS K I SGS D TV++ H+ L GHT V + + K
Sbjct: 373 ECISTYRGHSDSVLSVDSYQKVIVSGSADKTVKVWHVESRTCYTLRGHTEWVNCVKLHPK 432
Query: 122 GNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIP---KFDSSILSSGSYDGLIR 178
S S D +I+ W + + + LK H V I IP K ++ + + DG
Sbjct: 433 SFSCFSCSDDTTIRMWDIRTNSCLKVFRGHVGQVQKI-IPLTIKDVENLATDNTSDGSSP 491
Query: 179 IFD---TESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
D T+ T + +++ + ++ +P T LL LDN +KLW+ G
Sbjct: 492 QDDPTMTDGADESDTPSNEQETVLDEN-IPYPT--------HLLSCGLDNTIKLWDVKTG 542
Query: 236 TVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL-VISGNDSGSMCVWNVYSKNLVQKID 294
+RT + H +E ++ D +ISG+ GS+ VW++ S + +
Sbjct: 543 KCIRT-QFGH------------VEGVWDIAADNFRIISGSHDGSIKVWDLQSGKCMHTFN 589
Query: 295 EK--HRNSPLISISASYDKVATLS 316
+ R + + DKVA ++
Sbjct: 590 GRRLQRETQHTQTQSLGDKVAPIA 613
>At5g16750 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 876
Score = 65.5 bits (158), Expect = 1e-10
Identities = 61/285 (21%), Positives = 110/285 (38%), Gaps = 28/285 (9%)
Query: 36 ISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
+S DG IA + + + + S + + + L SPD K + S + +
Sbjct: 27 VSSDGSFIACACGDVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRV 86
Query: 96 THIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDA 154
+ + IR GH PV+ + + G +L ++ D + W V G H
Sbjct: 87 WDLETLKCIRSWKGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRGHKGV 146
Query: 155 VVSIDI-PKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSR 213
V SI P + +IL SGS D +R++D + + K I E ++++ S
Sbjct: 147 VSSILFHPDSNKNILISGSDDATVRVWDLNAKNTEKKCLA----IMEKHFSAVTSIALSE 202
Query: 214 NGKFLLVKSLDNVVKLWE---------------------YTRGTVVRTFLWPHQETKAKL 252
+G L D VV LW+ + GT +F+ + K+K
Sbjct: 203 DGLTLFSAGRDKVVNLWDLHDYSCKATVATYEVLEAVTTVSSGTPFASFVASLDQKKSKK 262
Query: 253 KYNCGLELIY-PQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEK 296
K + + G+ +V GS+C++ S ++ D++
Sbjct: 263 KESDSQATYFITVGERGVVRIWKSEGSICLYEQKSSDITVSSDDE 307
Score = 59.7 bits (143), Expect = 6e-09
Identities = 40/172 (23%), Positives = 81/172 (46%), Gaps = 10/172 (5%)
Query: 60 KMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHII-YGRIRRLMGHTAPVISICY 118
K + H + IN + + + + +GSED T I + + L GH + S+ +
Sbjct: 490 KTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEF 549
Query: 119 NNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIR 178
+ + ++S D+++K W + G+ LKT H+ +V+ + +S G+ DGL++
Sbjct: 550 STVDQCVMTASGDKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGA-DGLLK 608
Query: 179 IFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLW 230
+++ + C+ TYD+ ED V ++ + + + D V+ LW
Sbjct: 609 LWNVNTSECI--ATYDQH---EDKVWALAV---GKKTEMIATGGGDAVINLW 652
Score = 50.1 bits (118), Expect = 4e-06
Identities = 71/325 (21%), Positives = 139/325 (41%), Gaps = 37/325 (11%)
Query: 17 LQFDKQVLPASGKISTSCQISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCL 75
L K+++ + +I+ + + + +A+ N + + VY++++ + HKE + L
Sbjct: 348 LVLSKRLVGYNEEIADMKFLGDEEQFLAVATNLEEVRVYDVATMSCSYVLAGHKEVVLSL 407
Query: 76 --CWSPDSKC-IASGSEDFTVEITHIIYGRIRRL-MGHTAPVISICYNNKG-NILCSSSM 130
C S I +GS+D TV + + + GH ++++ + K + S S
Sbjct: 408 DTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKSFSFFVSGSG 467
Query: 131 DESIKEWHVLSGTA--------LKTMS---AHSDAVVSIDIPKFDSSILSSGSYDGLIRI 179
D ++K W L G + LKT S AH + S+ + + DS ++ +GS D I
Sbjct: 468 DRTLKVWS-LDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDS-LVCTGSEDRTASI 525
Query: 180 FDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVR 239
+ + TL K I +V+FS + ++ S D VK+W + G+ ++
Sbjct: 526 WRLPDLVHVVTLKGHKR--------RIFSVEFSTVDQCVMTASGDKTVKIWAISDGSCLK 577
Query: 240 TFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRN 299
TF T + L+ + + V G D G + +WNV + + D+
Sbjct: 578 TF---EGHTSSVLRAS------FITDGTQFVSCGAD-GLLKLWNVNTSECIATYDQHEDK 627
Query: 300 SPLISISASYDKVATLSLNGECNLF 324
+++ + +AT + NL+
Sbjct: 628 VWALAVGKKTEMIATGGGDAVINLW 652
>7303687 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 704
Score = 65.5 bits (158), Expect = 1e-10
Identities = 38/149 (25%), Positives = 78/149 (51%), Gaps = 3/149 (2%)
Query: 35 QISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
+ +P G C + ++ S++ +++ H ++C+ + P+S +A+GS D TV
Sbjct: 499 RFAPHGYYFVSCSYDKTARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTV 558
Query: 94 EITHIIYGRIRRLM-GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+ + G+ RLM GH V S+ ++ G L S S+D +I W + +G+ + T+ H+
Sbjct: 559 RLWDNMTGQSVRLMTGHKGSVSSLAFSACGRYLASGSVDHNIIIWDLSNGSLVTTLLRHT 618
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
V +I + D ++L++ D + ++D
Sbjct: 619 STVTTITFSR-DGTVLAAAGLDNNLTLWD 646
Score = 64.3 bits (155), Expect = 2e-10
Identities = 58/242 (23%), Positives = 101/242 (40%), Gaps = 22/242 (9%)
Query: 88 SEDFTVEITHIIYGRIRR-LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALK 146
S D V + G + R LMGHT PV + + N+L S S D +I+ W +L+ + +
Sbjct: 427 SADINVRMLDDRSGEVTRSLMGHTGPVYRCAFAPEMNLLLSCSEDSTIRLWSLLTWSCVV 486
Query: 147 TMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPI 206
T H V + +S SYD R++ T+S L+ + +
Sbjct: 487 TYRGHVYPVWDVRFAPHGYYFVSC-SYDKTARLWATDSNQALRVFV--------GHLSDV 537
Query: 207 STVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYN-CGLELIYPQG 265
V+F N ++ S D V+LW+ G VR + H+ + + L ++ CG L
Sbjct: 538 DCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVR-LMTGHKGSVSSLAFSACGRYL----- 591
Query: 266 KDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGECNLFR 325
SG+ ++ +W++ + +LV + I+ S +A L+ L+
Sbjct: 592 -----ASGSVDHNIIIWDLSNGSLVTTLLRHTSTVTTITFSRDGTVLAAAGLDNNLTLWD 646
Query: 326 VH 327
H
Sbjct: 647 FH 648
Score = 61.2 bits (147), Expect = 2e-09
Identities = 46/205 (22%), Positives = 95/205 (45%), Gaps = 11/205 (5%)
Query: 34 CQISPDGELIAIC-QNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFT 92
C +P+ L+ C +++ + ++ + + + H + + ++P S S D T
Sbjct: 456 CAFAPEMNLLLSCSEDSTIRLWSLLTWSCVVTYRGHVYPVWDVRFAPHGYYFVSCSYDKT 515
Query: 93 VEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAH 151
+ + +R +GH + V + ++ N + + S D +++ W ++G +++ M+ H
Sbjct: 516 ARLWATDSNQALRVFVGHLSDVDCVQFHPNSNYVATGSSDRTVRLWDNMTGQSVRLMTGH 575
Query: 152 SDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKF 211
+V S+ L+SGS D I I+D +G + TL ++T+ F
Sbjct: 576 KGSVSSLAFSAC-GRYLASGSVDHNIIIWDLSNGSLVTTLLRHTS--------TVTTITF 626
Query: 212 SRNGKFLLVKSLDNVVKLWEYTRGT 236
SR+G L LDN + LW++ + T
Sbjct: 627 SRDGTVLAAAGLDNNLTLWDFHKVT 651
>7300370 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 922
Score = 65.5 bits (158), Expect = 1e-10
Identities = 49/181 (27%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 59 SKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI-IYGRIRRLMGHTAPVISIC 117
S + K T +E + CL SPD K +A G D TV++ + + L GH PVI +
Sbjct: 529 SLLHKNTLKLEETVLCLAVSPDMKYLAVGLLDATVKVFFLDTFKFYLSLYGHKLPVICLD 588
Query: 118 YNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLI 177
+ N++ + S D ++K W + G +++ AH D+V+S+ + G DG +
Sbjct: 589 ISYDSNLIVTGSADRNVKVWGLNFGDCHRSIFAHDDSVMSVQFIPRTHMFFTCGK-DGKV 647
Query: 178 RIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTV 237
+ +D ++ + TL I E + +S NG++L+ D ++++E T T+
Sbjct: 648 KQWDGDNFEKILTL---PGHIGEAYCLSVSP-----NGRYLVTCGSDRTLRMFERTDETI 699
Query: 238 V 238
V
Sbjct: 700 V 700
>Hs4505895 [A] KOG0285 Pleiotropic regulator 1
Length = 514
Score = 65.1 bits (157), Expect = 1e-10
Identities = 58/232 (25%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTA 111
+++++S K+ T H + + S S + S ED V+ + Y + IR GH +
Sbjct: 230 IWDLASGKLKLSLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLS 289
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
V + + ++L + S D + + W V + ++ T+S H++AV ++ + I+ +G
Sbjct: 290 AVYGLDLHPTIDVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQII-TG 348
Query: 172 SYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
S+D IR++D +G TLT K + + V R+ F S DN +K W+
Sbjct: 349 SHDTTIRLWDLVAGKTRVTLTNHKKSVR-------AVVLHPRHYTF-ASGSPDN-IKQWK 399
Query: 232 YTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWN 283
+ G+ ++ L H L N D +++SG D+G+M +W+
Sbjct: 400 FPDGSFIQN-LSGHNAIINTLTVN----------SDGVLVSGADNGTMHLWD 440
>At5g67320 [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 613
Score = 65.1 bits (157), Expect = 1e-10
Identities = 45/157 (28%), Positives = 76/157 (47%), Gaps = 13/157 (8%)
Query: 48 NTDMLVY--EISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IR 104
+TD ++Y +I ++ K T H+ +NC+ W P +AS S+D T +I +I +
Sbjct: 425 STDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVH 484
Query: 105 RLMGHTAPVISICYN---------NKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
L HT + +I ++ NK L S+S D ++K W G L + + H + V
Sbjct: 485 DLREHTKEIYTIRWSPTGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPV 544
Query: 156 VSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLT 192
S+ + ++SGS D I I+ + G +KT T
Sbjct: 545 YSLAFSP-NGEYIASGSLDKSIHIWSIKEGKIVKTYT 580
Score = 57.4 bits (137), Expect = 3e-08
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Query: 108 GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSI 167
GH V + ++ G++L S S D + K W++ T + + H+ + +I
Sbjct: 446 GHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGT 505
Query: 168 --------LSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLL 219
L+S S+D ++++D E G L + ++ P+ ++ FS NG+++
Sbjct: 506 NNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHRE--------PVYSLAFSPNGEYIA 557
Query: 220 VKSLDNVVKLWEYTRGTVVRTF 241
SLD + +W G +V+T+
Sbjct: 558 SGSLDKSIHIWSIKEGKIVKTY 579
Score = 52.8 bits (125), Expect = 7e-07
Identities = 42/157 (26%), Positives = 74/157 (46%), Gaps = 27/157 (17%)
Query: 92 TVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT-------- 143
T + +HI +R L GHT+ V + ++ ++L S S D + + W + G+
Sbjct: 247 TSQTSHIPNSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGR 306
Query: 144 -----ALKTMSAHSDAVVSIDIPKFD----SSILSSGSYDGLIRIFDTESGHCLKTLTYD 194
LK S+ S D+ D ++L++GS DG RI+ T +G + TL+
Sbjct: 307 NINALILKHAKGKSNE-KSKDVTTLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKH 364
Query: 195 KDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
K PI ++K+++ G +LL S+D +W+
Sbjct: 365 KG--------PIFSLKWNKKGDYLLTGSVDRTAVVWD 393
Score = 51.2 bits (121), Expect = 2e-06
Identities = 50/219 (22%), Positives = 92/219 (41%), Gaps = 18/219 (8%)
Query: 24 LPASGKISTSCQI--SPDGELIAIC--QNTDMLVYEISSSKMMKLTTTHKECINCLCWSP 79
L ASG + +I P+G A+ +N + L+ + + K + + + L W+
Sbjct: 279 LLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGK----SNEKSKDVTTLDWNG 334
Query: 80 DSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV 139
+ +A+GS D I + I L H P+ S+ +N KG+ L + S+D + W V
Sbjct: 335 EGTLLATGSCDGQARIWTLNGELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDV 394
Query: 140 LSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIA 199
+ + HS ++D+ ++ ++ S D +I + KT T +
Sbjct: 395 KAEEWKQQFEFHSGP--TLDVDWRNNVSFATSSTDSMIYLCKIGETRPAKTFTGHQG--- 449
Query: 200 EDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
++ VK+ G L S D+ K+W + T V
Sbjct: 450 -----EVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFV 483
Score = 50.4 bits (119), Expect = 3e-06
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 11/125 (8%)
Query: 38 PDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSK---------CIASG 87
P G L+A C + ++ I S + H + I + WSP +AS
Sbjct: 458 PTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSPTGPGTNNPNKQLTLASA 517
Query: 88 SEDFTVEITHIIYGRIR-RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALK 146
S D TV++ G++ GH PV S+ ++ G + S S+D+SI W + G +K
Sbjct: 518 SFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVK 577
Query: 147 TMSAH 151
T + +
Sbjct: 578 TYTGN 582
Score = 50.4 bits (119), Expect = 3e-06
Identities = 57/247 (23%), Positives = 95/247 (38%), Gaps = 52/247 (21%)
Query: 74 CLC-WSPDSKCIASGSEDFTVEITHIIYGRIRR----------LMGH--------TAPVI 114
C C WSP + +ASGS D T I I G + ++ H + V
Sbjct: 269 CACAWSPSASLLASGSGDATARIWSIPEGSFKAVHTGRNINALILKHAKGKSNEKSKDVT 328
Query: 115 SICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYD 174
++ +N +G +L + S D + W L+G + T+S H + S+ K L +GS D
Sbjct: 329 TLDWNGEGTLLATGSCDGQARIW-TLNGELISTLSKHKGPIFSLKWNK-KGDYLLTGSVD 386
Query: 175 GLIRIFDTESGHCLKTL------TYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
++D ++ + T D DW RN S D+++
Sbjct: 387 RTAVVWDVKAEEWKQQFEFHSGPTLDVDW---------------RNNVSFATSSTDSMIY 431
Query: 229 LWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKN 288
L + +TF HQ +K++ P G L+ S +D + +WN+
Sbjct: 432 LCKIGETRPAKTFT-GHQGEVNCVKWD-------PTGS--LLASCSDDSTAKIWNIKQST 481
Query: 289 LVQKIDE 295
V + E
Sbjct: 482 FVHDLRE 488
>YBR198c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 798
Score = 64.7 bits (156), Expect = 2e-10
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 3/148 (2%)
Query: 62 MKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNN 120
+++ H ++C+ + P+ + +GS D T + + G +R +GHTAPVISI
Sbjct: 602 LRIFAGHLNDVDCVSFHPNGCYVFTGSSDKTCRMWDVSTGDSVRLFLGHTAPVISIAVCP 661
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAH-SDAVVSIDIPKFDSSILSSGSYDGLIRI 179
G L + S D I W + +G LK M H +A+ S+ K + ++L SG D +R+
Sbjct: 662 DGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGKNAIYSLSYSK-EGNVLISGGADHTVRV 720
Query: 180 FDTESGHCLKTLTYDKDWIAEDGVVPIS 207
+D + + D+ +I G V S
Sbjct: 721 WDLKKATTEPSAEPDEPFIGYLGDVTAS 748
Score = 58.2 bits (139), Expect = 2e-08
Identities = 59/288 (20%), Positives = 122/288 (41%), Gaps = 41/288 (14%)
Query: 50 DMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI------ 103
D L + S M T+K+ ++CL +S D + A+G +D ++I + +
Sbjct: 448 DNLQLALPSVCMYTFQNTNKD-MSCLDFSDDCRIAAAGFQDSYIKIWSLDGSSLNNPNIA 506
Query: 104 ------------RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAH 151
+ L+GH+ V S ++ L S S D++++ W + + TAL + H
Sbjct: 507 LNNNDKDEDPTCKTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGH 566
Query: 152 SDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKF 211
+ V + ++ S+D R++ + + L+ I + + V F
Sbjct: 567 NHPVWDVSFSPL-GHYFATASHDQTARLWSCDHIYPLR--------IFAGHLNDVDCVSF 617
Query: 212 SRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVI 271
NG ++ S D ++W+ + G VR FL H + + P G+ +
Sbjct: 618 HPNGCYVFTGSSDKTCRMWDVSTGDSVRLFL-GHTAPVISI-------AVCPDGR--WLS 667
Query: 272 SGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNG 319
+G++ G + VW++ + ++++ +N+ S SY K + ++G
Sbjct: 668 TGSEDGIINVWDIGTGKRLKQMRGHGKNA---IYSLSYSKEGNVLISG 712
Score = 54.3 bits (129), Expect = 2e-07
Identities = 44/223 (19%), Positives = 94/223 (41%), Gaps = 19/223 (8%)
Query: 63 KLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI-IYGRIRRLMGHTAPVISICYNNK 121
K H + +SPD+K + SGSED TV + + + + GH PV + ++
Sbjct: 519 KTLVGHSGTVYSTSFSPDNKYLLSGSEDKTVRLWSMDTHTALVSYKGHNHPVWDVSFSPL 578
Query: 122 GNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
G+ ++S D++ + W L+ + H + V + + + +GS D R++D
Sbjct: 579 GHYFATASHDQTARLWSCDHIYPLRIFAGHLNDVDCVSFHP-NGCYVFTGSSDKTCRMWD 637
Query: 182 TESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
+G ++ P+ ++ +G++L S D ++ +W+ G ++
Sbjct: 638 VSTGDSVRLFL--------GHTAPVISIAVCPDGRWLSTGSEDGIINVWDIGTGKRLKQM 689
Query: 242 LWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNV 284
+ L Y+ + ++ISG ++ VW++
Sbjct: 690 RGHGKNAIYSLSYS---------KEGNVLISGGADHTVRVWDL 723
>SPAC29E6.01 [S] KOG0281 Beta-TrCP (transducin repeats containing)/Slimb
proteins
Length = 506
Score = 64.7 bits (156), Expect = 2e-10
Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 20/199 (10%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI-----T 96
L++ ++ +++++ + + +K+ H + N L I S S D T + T
Sbjct: 276 LVSGSSDSTIIIWDWQNRRPLKVYFGHTD--NVLGVVVSENYIISSSRDHTARVWRLDAT 333
Query: 97 HIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVV 156
+ L GH A V S+ Y++K ++ ++S D +++ W + +G ++ + AH +
Sbjct: 334 SPAEACMHVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIA 393
Query: 157 SIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGK 216
+++ + SGS D IRIF+ SG L+ L +D I TV+F N +
Sbjct: 394 ---CAQYNGKFIVSGSSDLTIRIFEASSGKLLRMLQGHEDL--------IRTVRF--NDE 440
Query: 217 FLLVKSLDNVVKLWEYTRG 235
++ D V++W + G
Sbjct: 441 KIVSGGYDGTVRIWNFNTG 459
Score = 63.5 bits (153), Expect = 4e-10
Identities = 60/294 (20%), Positives = 130/294 (43%), Gaps = 29/294 (9%)
Query: 31 STSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSED 90
S C D +++ ++ + V++++S ++ H + CL + + SGS D
Sbjct: 223 SVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRNLLVSGSSD 282
Query: 91 FTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV-LSGTALKTM 148
T+ I R ++ GHT V+ + + N + SSS D + + W + + A M
Sbjct: 283 STIIIWDWQNRRPLKVYFGHTDNVLGVVVSE--NYIISSSRDHTARVWRLDATSPAEACM 340
Query: 149 SAHSDAVVSIDIPKFDSS--ILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPI 206
+ S++ ++ S ++ + S D +R +D +GHC++ + + IA
Sbjct: 341 HVLRGHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIA------- 393
Query: 207 STVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGK 266
NGKF++ S D ++++E + G ++R L H++ +++N
Sbjct: 394 ---CAQYNGKFIVSGSSDLTIRIFEASSGKLLR-MLQGHEDLIRTVRFN----------- 438
Query: 267 DPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGE 320
D ++SG G++ +WN ++ + RNS + + + ++ + + E
Sbjct: 439 DEKIVSGGYDGTVRIWN-FNTGEQHCVLHNSRNSRVFGLQFDHRRIIACTHSSE 491
>Hs5031817 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 655
Score = 64.3 bits (155), Expect = 2e-10
Identities = 49/214 (22%), Positives = 97/214 (44%), Gaps = 20/214 (9%)
Query: 82 KCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVL 140
+ +A+G +D V + I I L GHT+PV S+ N ++ + S SI+ W +
Sbjct: 34 RLLATGGDDCRVNLWSINKPNCIMSLTGHTSPVESVRLNTPEELIVAGSQSGSIRVWDLE 93
Query: 141 SGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAE 200
+ L+T+ + S+D + ++SGS D I+++D C+
Sbjct: 94 AAKILRTLMGLKANICSLDFHPY-GEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQ---- 148
Query: 201 DGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLEL 260
+ ++FS +GK+L + D+ VKLW+ T G ++ F + + +
Sbjct: 149 ----AVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEF----------PGHTGPVNV 194
Query: 261 IYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKID 294
+ + L+ SG+ G++ W++ +V +I+
Sbjct: 195 VEFHPNEYLLASGSSDGTIRFWDLEKFQVVSRIE 228
Score = 63.2 bits (152), Expect = 5e-10
Identities = 55/218 (25%), Positives = 98/218 (44%), Gaps = 11/218 (5%)
Query: 33 SCQISPDGELIAI-CQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDF 91
S P GE +A Q+T++ +++I + H + + CL +SPD K +AS ++D
Sbjct: 110 SLDFHPYGEFVASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDH 169
Query: 92 TVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSA 150
TV++ + G+ + GHT PV + ++ +L S S D +I+ W + + +
Sbjct: 170 TVKLWDLTAGKMMSEFPGHTGPVNVVEFHPNEYLLASGSSDGTIRFWDLEKFQVVSRIEG 229
Query: 151 HSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVV--PIST 208
V S+ + D L SG D L R++ E C + + +A+ + +
Sbjct: 230 EPGPVRSV-LFNPDGCCLYSGCQDSL-RVYGWEPERCFDVVLVNWGKVADLAICNDQLIG 287
Query: 209 VKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQ 246
V FS++ V L V + GTV R + H+
Sbjct: 288 VAFSQSNVSSYVVDLTRVTR-----TGTVARDPVQDHR 320
Score = 63.2 bits (152), Expect = 5e-10
Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 11/200 (5%)
Query: 37 SPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEIT 96
+P+ ++A Q+ + V+++ ++K+++ K I L + P + +ASGS+D +++
Sbjct: 73 TPEELIVAGSQSGSIRVWDLEAAKILRTLMGLKANICSLDFHPYGEFVASGSQDTNIKLW 132
Query: 97 HI-IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
I G + R GH+ V + ++ G L S++ D ++K W + +G + H+ V
Sbjct: 133 DIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGKMMSEFPGHTGPV 192
Query: 156 VSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNG 215
++ + +L+SGS DG IR +D E + + E G P+ +V F+ +G
Sbjct: 193 NVVEFHP-NEYLLASGSSDGTIRFWDLEKFQVVSRIE------GEPG--PVRSVLFNPDG 243
Query: 216 KFLLVKSLDNV-VKLWEYTR 234
L D++ V WE R
Sbjct: 244 CCLYSGCQDSLRVYGWEPER 263
>YLR129w [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 943
Score = 63.9 bits (154), Expect = 3e-10
Identities = 60/242 (24%), Positives = 115/242 (46%), Gaps = 21/242 (8%)
Query: 39 DGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI 98
+ L+ +N + V ++ ++LT + I C+ SPD + +A D TV++ +
Sbjct: 505 ENSLVPGTKNKFLPVLKLHHDTTLELT----DDILCVRVSPDDRYLAISLLDNTVKVFFL 560
Query: 99 IYGRIR-RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVS 157
+ L GH PV+SI + ++ +SS D++IK W + G K++ AH D++++
Sbjct: 561 DSMKFYLSLYGHKLPVLSIDISFDSKMIITSSADKNIKIWGLDFGDCHKSLFAHQDSIMN 620
Query: 158 IDIPKF--DSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNG 215
+ KF S S S D +++ +D E C++ L + +E + ++T +G
Sbjct: 621 V---KFLPQSHNFFSCSKDAVVKYWDGEKFECIQKLYAHQ---SEVWALAVAT-----DG 669
Query: 216 KFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGND 275
F++ S D+ +++WE T V FL +E + + +Y L +G +
Sbjct: 670 GFVVSSSHDHSIRIWEETEDQV---FLEEEKEKELEEQYEDTLLTSLEEGNGDDAFKADA 726
Query: 276 SG 277
SG
Sbjct: 727 SG 728
Score = 53.5 bits (127), Expect = 4e-07
Identities = 58/237 (24%), Positives = 107/237 (44%), Gaps = 37/237 (15%)
Query: 33 SCQISPDGELIAI-CQNTDMLVYEISSSKMMK-LTTTHKECINCLCWSPDSKCIASGSED 90
+C+ P G L+ + +N ++ +++++SS ++ + H I L + D K + +GS D
Sbjct: 435 TCKFLPGGLLVILGTRNGELQLFDLASSSLLDTIEDAHDAAIWSLDLTSDGKRLVTGSAD 494
Query: 91 FTVEI------THIIYGRIRRLMGHTAPVISICYNN----KGNILC-----------SSS 129
TV+ ++ G + + PV+ + ++ +ILC S
Sbjct: 495 KTVKFWDFKVENSLVPGTKNKFL----PVLKLHHDTTLELTDDILCVRVSPDDRYLAISL 550
Query: 130 MDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLK 189
+D ++K + + S ++ H V+SIDI FDS ++ + S D I+I+ + G C K
Sbjct: 551 LDNTVKVFFLDSMKFYLSLYGHKLPVLSIDI-SFDSKMIITSSADKNIKIWGLDFGDCHK 609
Query: 190 TLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQ 246
+L +D I VKF S D VVK W+ + ++ L+ HQ
Sbjct: 610 SLFAHQD--------SIMNVKFLPQSHNFFSCSKDAVVKYWDGEKFECIQK-LYAHQ 657
>YJL112w [R] KOG4155 FOG: WD40 repeat
Length = 714
Score = 63.9 bits (154), Expect = 3e-10
Identities = 61/232 (26%), Positives = 100/232 (42%), Gaps = 39/232 (16%)
Query: 59 SKMMKLTTTHKECINCLCW-SPDSKCIASGSEDFTVEITHII-YGRIRRLMGHTAPVISI 116
+K+ + +TH + + CL + +P +G D TV+I + +I L GH A + +
Sbjct: 388 TKIGSIMSTHDDFLTCLDFDAPFGTLCTAGYLDHTVKIWDLSKQNKIGELAGHLATINCM 447
Query: 117 CYNNKGNILCSSSMDESIKEWHV-------------------LSGTALKTMSAHSDAVVS 157
N L + D ++K W++ + + T AH+D V +
Sbjct: 448 QINRDYGTLVTGGRDAALKLWNLNLAQQLYQETQNLTSPTNHIDSPCVHTFEAHTDEVTA 507
Query: 158 IDIPKFDSSILSSGSYDGLIRIFDTESGHCLKT--LTYDKDWIAEDGV-VPISTVKFSRN 214
+ + D S L SGS D IR +D SG CL+T L++ V + ST+ RN
Sbjct: 508 LSL---DPSFLVSGSQDRTIRQWDLRSGKCLQTIDLSFANVLTTSTNVDLSKSTLLTQRN 564
Query: 215 GK-----------FLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYN 255
+ L + D VV+LW+ G V+RT L H + LK++
Sbjct: 565 ERPSIGALQSFDAALATGTKDGVVRLWDLRSGKVIRT-LKGHTDAITSLKFD 615
Score = 51.6 bits (122), Expect = 2e-06
Identities = 26/77 (33%), Positives = 44/77 (56%), Gaps = 3/77 (3%)
Query: 125 LCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTES 184
L + + D ++ W + SG ++T+ H+DA+ S+ KFDS+ L +GSYD +RI+D +
Sbjct: 579 LATGTKDGVVRLWDLRSGKVIRTLKGHTDAITSL---KFDSACLVTGSYDRTVRIWDLRT 635
Query: 185 GHCLKTLTYDKDWIAED 201
G K Y ++ D
Sbjct: 636 GLLNKFHAYSAPVLSLD 652
>YCR072c [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 515
Score = 63.9 bits (154), Expect = 3e-10
Identities = 44/156 (28%), Positives = 72/156 (45%), Gaps = 12/156 (7%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI--RRLMGHT 110
+++ + M H + C+ WSPD + IA+GS D T+ + G+ L GH+
Sbjct: 170 IWDCDTQTPMHTLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDPKSGQCLGDALRGHS 229
Query: 111 APVISICYN-------NKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF 163
+ S+ + L SSS D +IK W +S TMS H+++V +
Sbjct: 230 KWITSLSWEPIHLVKPGSKPRLASSSKDGTIKIWDTVSRVCQYTMSGHTNSVSCVKWG-- 287
Query: 164 DSSILSSGSYDGLIRIFDTES-GHCLKTLTYDKDWI 198
+L SGS+D +R++D S G C+ L W+
Sbjct: 288 GQGLLYSGSHDRTVRVWDINSQGRCINILKSHAHWV 323
Score = 57.8 bits (138), Expect = 2e-08
Identities = 37/151 (24%), Positives = 75/151 (49%), Gaps = 5/151 (3%)
Query: 34 CQISPDGELIAICQNTDMLVY---EISSSKMMKLTTTHKECINCLCWSPDSKCIASGSED 90
C+ + + E + + + D ++ + S+K + T H++ +N + +SPD + I S S D
Sbjct: 364 CKKNGNSEEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFD 423
Query: 91 FTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMS 149
++++ G+ I GH A V + +++ +L S S D ++K W V + +
Sbjct: 424 NSIKLWDGRDGKFISTFRGHVASVYQVAWSSDCRLLVSCSKDTTLKVWDVRTRKLSVDLP 483
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
H D V ++D D + SG D ++R++
Sbjct: 484 GHKDEVYTVDW-SVDGKRVCSGGKDKMVRLW 513
Score = 49.7 bits (117), Expect = 6e-06
Identities = 38/151 (25%), Positives = 68/151 (44%), Gaps = 11/151 (7%)
Query: 84 IASGSEDFTVEITHIIYGR--IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLS 141
+ + S+D+T+ + + + I R+ GH V + ++ G + S+S D SIK W
Sbjct: 374 MVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWDGRD 433
Query: 142 GTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAED 201
G + T H +V + D +L S S D ++++D + L KD
Sbjct: 434 GKFISTFRGHVASVYQVAWSS-DCRLLVSCSKDTTLKVWDVRTRKLSVDLPGHKD----- 487
Query: 202 GVVPISTVKFSRNGKFLLVKSLDNVVKLWEY 232
+ TV +S +GK + D +V+LW +
Sbjct: 488 ---EVYTVDWSVDGKRVCSGGKDKMVRLWTH 515
>At1g52360 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 926
Score = 63.9 bits (154), Expect = 3e-10
Identities = 58/236 (24%), Positives = 100/236 (41%), Gaps = 28/236 (11%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG--RIRRLMGHT 110
VY ++ +K+ H + I C+ P + S S+D +++ G + GH+
Sbjct: 83 VYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHS 142
Query: 111 APVISICYNNKG-NILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID-IPKFDSSIL 168
V+ + +N K N S+S+D +IK W++ S T+ AH V +D D L
Sbjct: 143 HYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 202
Query: 169 SSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
+GS D +++D ++ C++TL E +S V F ++ S D V+
Sbjct: 203 ITGSDDHTAKVWDYQTKSCVQTL--------EGHTHNVSAVCFHPELPIIITGSEDGTVR 254
Query: 229 LWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQG---KDPLVISGNDSGSMCV 281
+W T + T N GLE ++ G V+ G D G++ V
Sbjct: 255 IWHATTYRLENTL-------------NYGLERVWAIGYIKSSRRVVIGYDEGTIMV 297
>7298053 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 860
Score = 63.9 bits (154), Expect = 3e-10
Identities = 47/182 (25%), Positives = 84/182 (45%), Gaps = 12/182 (6%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITH--IIYGRIRRLMGHT 110
V+ ++ + + H + + C+ P + + S+D +++ + ++ R GHT
Sbjct: 54 VFNYNTLEKVHSFEAHSDYLRCIAVHPTQPLVLTSSDDMLIKLWNWEKMWACQRVFEGHT 113
Query: 111 APVISICYNNK-GNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID-IPKFDSSIL 168
V+ I +N K N S+S+D ++K W + S A T+ H V +D D L
Sbjct: 114 HYVMQIVFNPKDNNTFASASLDRTVKVWQLGSNFANFTLEGHEKGVNCVDYYHGGDKPYL 173
Query: 169 SSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
SG+ D L++I+D ++ C++TL E IS V F +L S D V+
Sbjct: 174 ISGADDRLVKIWDYQNKTCVQTL--------EGHAQNISAVCFHPELPIVLTGSEDGTVR 225
Query: 229 LW 230
+W
Sbjct: 226 IW 227
>Hs6912360 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 422
Score = 63.5 bits (153), Expect = 4e-10
Identities = 65/265 (24%), Positives = 117/265 (43%), Gaps = 28/265 (10%)
Query: 15 RMLQF-DKQVLPASGKISTSCQISP----DGELIAICQNTDMLVYEISSSKMMKLTTTHK 69
RM Q D + S I S ++ DG L + ++++S+ + + TH
Sbjct: 129 RMKQLEDHEAFETSSLIGHSARVYALYYKDGLLCTGSDDLSAKLWDVSTGQCVYGIQTH- 187
Query: 70 ECINCLCWSPDSKCIASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNILCSS 128
C D + + +GS D TV G R + GHT V S+ YN++ +IL S
Sbjct: 188 ---TCAAVKFDEQKLVTGSFDNTVACWEWSSGARTQHFRGHTGAVFSVDYNDELDILVSG 244
Query: 129 SMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF----------DSSILSSGSYDGLIR 178
S D ++K W + +GT L T++ H++ V + + K D +LS+ Y+ I
Sbjct: 245 SADFTVKVWALSAGTCLNTLTGHTEWVTKVVLQKCKVKSLLHSPGDYILLSADKYEIKIW 304
Query: 179 IFDTE-SGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTV 237
E + CLKTL+ ++ED + + + +GK+++ S + + W++ +
Sbjct: 305 PIGREINCKCLKTLS-----VSEDRSICLQP-RLHFDGKYIVCSSALGLYQ-WDFASYDI 357
Query: 238 VRTFLWPHQETKAKLKYNCGLELIY 262
+R P A L + L++
Sbjct: 358 LRVIKTPEIANLALLGFGDIFALLF 382
>At5g52820 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 63.5 bits (153), Expect = 4e-10
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 37 SPDGELIAICQNTDMLVYEISSSKMMKLTTT-HKECINCLCWSPDSKCIASGSEDFTVEI 95
SP+ L++ + M ++E S SK K T H++ +N + +SPD K IAS S D +V +
Sbjct: 328 SPE-RLVSGSDDFTMFLWEPSVSKQPKKRLTGHQQLVNHVYFSPDGKWIASASFDKSVRL 386
Query: 96 THIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDA 154
+ I G+ + GH PV + ++ +L S S D ++K W + + + + H+D
Sbjct: 387 WNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPGHADE 446
Query: 155 VVSIDIPKFDSSILSSG 171
V ++D ++S G
Sbjct: 447 VFAVDWSPDGEKVVSGG 463
Score = 52.4 bits (124), Expect = 9e-07
Identities = 48/179 (26%), Positives = 78/179 (42%), Gaps = 17/179 (9%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILC 126
H E + C+ +SPD K +ASGS D TV + + + GH V+++ ++ G L
Sbjct: 108 HAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKGHKNWVLTVAWSPDGKHLV 167
Query: 127 SSSMDESIKEWHVLSGTAL-KTMSAHSDAVVSIDIPKFDSSI----LSSGSYDGLIRIFD 181
S S I W+ G ++ H + I S + S DG RI+D
Sbjct: 168 SGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVTSSKDGDARIWD 227
Query: 182 TESGHCLKTLTYDKDWIAEDG-VVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVR 239
+T K I G + ++ VK+ +G + S D +K+WE T+G ++R
Sbjct: 228 ---------ITLKKSIICLSGHTLAVTCVKWGGDG-IIYTGSQDCTIKMWETTQGKLIR 276
>YKR036c [R] KOG4155 FOG: WD40 repeat
Length = 659
Score = 63.2 bits (152), Expect = 5e-10
Identities = 48/181 (26%), Positives = 86/181 (46%), Gaps = 23/181 (12%)
Query: 106 LMGHTAPVISI--CYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF 163
L+G AP+I CYN+ L + + D ++ W + G ++ + H+D + S+ KF
Sbjct: 500 LLGTEAPMIGALQCYNSA---LATGTKDGIVRLWDLRVGKPVRLLEGHTDGITSL---KF 553
Query: 164 DSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSL 223
DS L +GS D +RI+D + L + YD +P+S++ F +GK + V +
Sbjct: 554 DSEKLVTGSMDNSVRIWDLRTSSILDVIAYD---------LPVSSLDF--DGKLITVGAN 602
Query: 224 DNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWN 283
+ V ++ R T PH +L + + KD +I+G++ G + VW
Sbjct: 603 EGGVNVFNMERDEHWMTPEPPHSLDGDELSRRIAI----VKYKDGFLINGHNDGDINVWT 658
Query: 284 V 284
+
Sbjct: 659 L 659
>SPBC15D4.14 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 642
Score = 63.2 bits (152), Expect = 5e-10
Identities = 56/258 (21%), Positives = 100/258 (38%), Gaps = 34/258 (13%)
Query: 72 INCLCWSPDSKCIASGSEDFTVEITHIIYG-------------RIRRLMGHTAPVISICY 118
+NC +S D+ A G D ++ + + L+GHT PV +
Sbjct: 352 VNCAAFSDDASMFALGCADSSIHLYSSTNNGPQPLVGSQNEPLQKSSLIGHTRPVFGVSI 411
Query: 119 NNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIR 178
+ + + S S D + W + + + + H+ + + F ++ S+D R
Sbjct: 412 SPQKEFILSCSEDGFTRLWSKDTKSTIVKYAGHNAPIWDVQFSPF-GYYFATASHDQTAR 470
Query: 179 IFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
++D E L+ ++ + V F N +L S D+ ++W+ G V
Sbjct: 471 LWDVEHAAPLRVFVGHQN--------DVDCVSFHPNAAYLATGSSDHTTRMWDVRTGGTV 522
Query: 239 RTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHR 298
R F H A GL L S ++SG + VW++ S N Q +
Sbjct: 523 RVFNAHHSPVSALCMSADGLSL----------ASADESGIIKVWDLRSSN--QHVSFVKH 570
Query: 299 NSPLISISASYDKVATLS 316
+S + S+S SYD +S
Sbjct: 571 SSIVYSLSFSYDNKILVS 588
Score = 58.2 bits (139), Expect = 2e-08
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 3/149 (2%)
Query: 35 QISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
Q SP G A + ++++ + +++ H+ ++C+ + P++ +A+GS D T
Sbjct: 452 QFSPFGYYFATASHDQTARLWDVEHAAPLRVFVGHQNDVDCVSFHPNAAYLATGSSDHTT 511
Query: 94 EITHI-IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+ + G +R H +PV ++C + G L S+ IK W + S + HS
Sbjct: 512 RMWDVRTGGTVRVFNAHHSPVSALCMSADGLSLASADESGIIKVWDLRSSNQHVSFVKHS 571
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
V S+ +D+ IL SG D + +D
Sbjct: 572 SIVYSLSF-SYDNKILVSGGADTDVNFWD 599
>Hs19913369 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 808
Score = 63.2 bits (152), Expect = 5e-10
Identities = 35/130 (26%), Positives = 72/130 (54%), Gaps = 2/130 (1%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM-GHTAPVISICYNNKGNILC 126
H + IN + +P+ K +A+GS+D T ++ + ++ + GH + + ++ +L
Sbjct: 478 HDKDINSVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLA 537
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGH 186
++S D +IK W + + LKT H +V+ + + +LSSGS DGL++++ ++
Sbjct: 538 TASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGS-DGLVKLWTIKNNE 596
Query: 187 CLKTLTYDKD 196
C++TL +D
Sbjct: 597 CVRTLDAHED 606
Score = 60.1 bits (144), Expect = 4e-09
Identities = 33/142 (23%), Positives = 74/142 (51%), Gaps = 2/142 (1%)
Query: 33 SCQISPDGELIAI-CQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDF 91
S I+P+ +L+A Q+ ++ + +++ + + H+ + C+ +SP + +A+ S D
Sbjct: 484 SVAIAPNDKLLATGSQDRTAKLWALPQCQLLGVFSGHRRGLWCVQFSPMDQVLATASADG 543
Query: 92 TVEITHII-YGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSA 150
T+++ + + ++ GH A V+ + + ++G L SS D +K W + + ++T+ A
Sbjct: 544 TIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQLLSSGSDGLVKLWTIKNNECVRTLDA 603
Query: 151 HSDAVVSIDIPKFDSSILSSGS 172
H D V + + D L+ S
Sbjct: 604 HEDKVWGLHCSRLDDHALTGAS 625
Score = 54.3 bits (129), Expect = 2e-07
Identities = 60/245 (24%), Positives = 102/245 (41%), Gaps = 22/245 (8%)
Query: 32 TSCQISPDGELIAICQNTDMLVY----EISSSKMMKLTTTHKECINCLCWSPDSKCIASG 87
T+ +SPD E++ +L E S +++ K H + + + P S +A+G
Sbjct: 70 TAFDLSPDNEVLVTASRALLLAQWAWQEGSVTRLWK--AIHTAPVATMAFDPTSTLLATG 127
Query: 88 SEDFTVEITHII--YGRIRRLMGHTAPVISICYNNKGN--ILCSSSMDESIKEWHVLSGT 143
D V + I+ YG G V + ++ +L SS+ D +I+ W + +
Sbjct: 128 GCDGAVRVWDIVRHYGT-HHFRGSPGVVHLVAFHPDPTRLLLFSSATDAAIRVWSLQDRS 186
Query: 144 ALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGV 203
L ++AH AV S+ ++LSSG D + I+D +S C T T E V
Sbjct: 187 CLAVLTAHYSAVTSLAFSADGHTMLSSGR-DKICIIWDLQS--CQATRTVPVFESVEAAV 243
Query: 204 V----PISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWP----HQETKAKLKYN 255
+ P+S + G + L +++WE G V T P + T L +
Sbjct: 244 LLPEEPVSQLGVKSPGLYFLTAGDQGTLRVWEAASGQCVYTQAQPPGPGQELTHCTLAHT 303
Query: 256 CGLEL 260
G+ L
Sbjct: 304 AGVVL 308
Score = 51.6 bits (122), Expect = 2e-06
Identities = 45/218 (20%), Positives = 91/218 (41%), Gaps = 12/218 (5%)
Query: 25 PASGKISTSCQISPD-GELIAICQNTDMLVYEISSSKMMKLTTTH-KECINCLCWSPDSK 82
P G+ T C ++ G ++ + ++L+YE S ++ K + +E ++ P+
Sbjct: 289 PGPGQELTHCTLAHTAGVVLTATADHNLLLYEARSLRLQKQFAGYSEEVLDVRFLGPEDS 348
Query: 83 CIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG 142
+ S +++ + + L GHT V+++ KG + S + D+S++ W +
Sbjct: 349 HVVVASNSPCLKVFELQTSACQILHGHTDIVLALDVFRKGWLFASCAKDQSVRIWRMNKA 408
Query: 143 TALKTM---SAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIA 199
+ + S H+ +V ++ + S L +GS D ++++ K D I
Sbjct: 409 GQVMCVAQGSGHTHSVGTVCCSRLKESFLVTGSQDCTVKLWPLPKALLSKNTAPDNGPIL 468
Query: 200 EDGVV-------PISTVKFSRNGKFLLVKSLDNVVKLW 230
I++V + N K L S D KLW
Sbjct: 469 LQAQTTQRCHDKDINSVAIAPNDKLLATGSQDRTAKLW 506
>At3g21540 [A] KOG0306 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 63.2 bits (152), Expect = 5e-10
Identities = 51/216 (23%), Positives = 99/216 (45%), Gaps = 14/216 (6%)
Query: 21 KQVLPASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECIN----CLC 76
++V G I + I D + + + ++ +E ++K + ++ +N +
Sbjct: 481 EEVKAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQATKKLTVSNVKSMKMNDDVLAVA 540
Query: 77 WSPDSKCIASGSEDFTVEITHIIYGRIR-RLMGHTAPVISICYNNKGNILCSSSMDESIK 135
SPD+K IA D TV++ ++ + L GH PV+ I ++ G ++ + S D+++K
Sbjct: 541 ISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPVMCIDISSDGELIVTGSQDKNLK 600
Query: 136 EWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDK 195
W + G K++ AH D+V+ + + + S G D L++ +D + L TL
Sbjct: 601 IWGLDFGDCHKSIFAHGDSVMGVKFVRNTHYLFSIGK-DRLVKYWDADKFEHLLTL---- 655
Query: 196 DWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
E I + S G FL+ S D ++ W+
Sbjct: 656 ----EGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 687
Score = 54.7 bits (130), Expect = 2e-07
Identities = 51/216 (23%), Positives = 92/216 (41%), Gaps = 23/216 (10%)
Query: 115 SICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSD----AVVSIDIPKFDSSILSS 170
+I Y++ G + + ++ E + WHV G KT++ S ++ I SS+++
Sbjct: 23 NIAYDSTGKYVLAPAL-EKVGIWHVRQGVCSKTLTPSSSRGGPSLAVTSIASSASSLVAV 81
Query: 171 GSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLW 230
G DG IRI+DTE G C K ++ +++++ G L S DN + LW
Sbjct: 82 GYADGSIRIWDTEKGTCEVNFNSHKG--------AVTALRYNKVGSMLASGSKDNDIILW 133
Query: 231 EYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLV 290
+ G L H++ +L++ G LV S D + VW++ +++ +
Sbjct: 134 DVV-GESGLFRLRGHRDQVT--------DLVFLDGGKKLVSSSKDK-FLRVWDLETQHCM 183
Query: 291 QKIDEKHRNSPLISISASYDKVATLSLNGECNLFRV 326
Q + H + V T S + E + V
Sbjct: 184 QIVSGHHSEVWSVDTDPEERYVVTGSADQELRFYAV 219
>ECU01g1300 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 423
Score = 62.8 bits (151), Expect = 7e-10
Identities = 62/246 (25%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 80 DSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV 139
D +A S+D T++I + IR +GH V + +N+K L S S D++ + W +
Sbjct: 124 DKDKVACSSDDQTIKIFGMDGRLIRTFVGHKGGVWTFMFNDK--YLVSGSTDKTARIWDL 181
Query: 140 LSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIA 199
+G L + H V S+ K +++GS D IRI++ G CL L
Sbjct: 182 WTGCTLCVLIGHKSVVRSL---KIYDDYIATGSRDAEIRIWNFR-GTCLNVLKGH----- 232
Query: 200 EDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQ------------- 246
+S +L+ S D V LW+Y RG ++R +L PH
Sbjct: 233 -----TMSVRCMDMGESYLVSGSYDGSVALWDYRRGKLLR-YLKPHSLRVYSVSLSSSYV 286
Query: 247 --------------ETKAKLKYNCGLELIY---PQGKDPLVISGNDSGSMCVWNVYSKNL 289
+ K + Y L+ G ++S G +C W+V L
Sbjct: 287 ASGSLDSSVHVSTLDGKLQCSYRIHRSLVIWLKFVGSGRFLLSSGADGILCKWDVLENAL 346
Query: 290 VQKIDE 295
V KI+E
Sbjct: 347 VYKIEE 352
>At3g15980 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 921
Score = 62.8 bits (151), Expect = 7e-10
Identities = 57/236 (24%), Positives = 100/236 (42%), Gaps = 28/236 (11%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG--RIRRLMGHT 110
VY ++ +K+ H + I C+ P + S S+D +++ G + GH+
Sbjct: 86 VYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHS 145
Query: 111 APVISICYNNKG-NILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID-IPKFDSSIL 168
V+ + +N K N S+S+D +IK W++ S T+ AH V +D D L
Sbjct: 146 HYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYL 205
Query: 169 SSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
+GS D +++D ++ C++TL + +S V F ++ S D V+
Sbjct: 206 ITGSDDHTAKVWDYQTKSCVQTL--------DGHTHNVSAVCFHPELPIIITGSEDGTVR 257
Query: 229 LWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQG---KDPLVISGNDSGSMCV 281
+W T + T N GLE ++ G V+ G D G++ V
Sbjct: 258 IWHATTYRLENTL-------------NYGLERVWAIGYIKSSRRVVIGYDEGTIMV 300
>SPBC1289.11 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 340
Score = 62.4 bits (150), Expect = 9e-10
Identities = 34/158 (21%), Positives = 76/158 (47%), Gaps = 13/158 (8%)
Query: 77 WSPDSKCIASGSEDFTVEITHIIYGRIRR---LMGHTAPVISICYNNKGNILCSSSMDES 133
+ P ASG D + + ++ +G ++ L G + + ++ ++ SS D
Sbjct: 58 FDPSGSYFASGGMDRQILLWNV-FGDVKNYGVLNGCKGAITDLQWSRDSRVVYCSSSDTH 116
Query: 134 IKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTY 193
+ W +SG ++ H+ V ++D+ K S +L+S S D ++++D+ S C+KT+
Sbjct: 117 LMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTI-- 174
Query: 194 DKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
+ P++ V ++ G + + +D +K+W+
Sbjct: 175 -------EEKYPLTAVAIAQQGTQVFIGGIDGAIKIWD 205
Score = 52.8 bits (125), Expect = 7e-07
Identities = 51/229 (22%), Positives = 96/229 (41%), Gaps = 15/229 (6%)
Query: 32 TSCQISPDGELIAICQNTD--MLVYEISSSKMMKLTTTHKECINCL-CWSPDSKCIASGS 88
T Q S D ++ C ++D ++ ++ S + ++ H +N L S+ + S S
Sbjct: 97 TDLQWSRDSRVV-YCSSSDTHLMSWDAVSGQKIRKHKGHAGVVNALDVLKVGSELLTSVS 155
Query: 89 EDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM 148
+D T+++ + + P+ ++ +G + +D +IK W + + +
Sbjct: 156 DDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQQGTQVFIGGIDGAIKIWDLRNNHCSHVL 215
Query: 149 SAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPIST 208
H D + S+ I K SS+LS+ S D +RIFD + + + +
Sbjct: 216 KGHKDIITSLAISKDGSSLLSN-SMDNTVRIFDVKPFASAQRQLQIFEGAIHGQEHNLLG 274
Query: 209 VKFSRNGKFLLVKSLDNVVKLWEYT----------RGTVVRTFLWPHQE 247
V +SRN +F+ S D V +W T G+V PHQ+
Sbjct: 275 VAWSRNSRFVGAGSSDKNVYVWSATGDLRYVLPGHEGSVNHVDFHPHQD 323
>Hs4758560 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 62.4 bits (150), Expect = 9e-10
Identities = 63/293 (21%), Positives = 119/293 (40%), Gaps = 49/293 (16%)
Query: 64 LTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG---RIRRLMGHTAPVISICYNN 120
L + H+ + C + P+ +AS D + + ++ YG L GH+ V+ + YN
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMELHYNT 119
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
G++L S+S D+++ W +G +K + H+ V S + ++ +GS DG ++++
Sbjct: 120 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSPQLVCTGSDDGTVKLW 179
Query: 181 DTESGHCLKTL--TYD---------KDWIAEDGV----------------------VPIS 207
D ++T TY D I G+ ++
Sbjct: 180 DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 239
Query: 208 TVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKD 267
+ S G +LL ++DN V++W+ + Q + N P G
Sbjct: 240 GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 299
Query: 268 PLVISGNDSGSMCVWNVYSKNLVQKIDEK---------HRNSPLISISASYDK 311
+ +G+ + VW+ S+ ++ K+ H + P+I ISAS DK
Sbjct: 300 --IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII-ISASSDK 349
Score = 53.5 bits (127), Expect = 4e-07
Identities = 40/197 (20%), Positives = 85/197 (42%), Gaps = 10/197 (5%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECIN-CLCWSPDSKCIASGSEDFTVEITHIIY 100
L + + + V++ + + +K H +N C + + +GS+D TV++ I
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARKSPQLVCTGSDDGTVKLWDIRK 183
Query: 101 GRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDI 160
+ +T V+++ +N+ + + S +D IK W + TM H+D+V + +
Sbjct: 184 KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSL 243
Query: 161 PKFDSSILSSGSYDGLIRIFDTE----SGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGK 216
+ S L S + D +R++D C+K + ++ + +S +G
Sbjct: 244 SS-EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN----LLRCSWSPDGS 298
Query: 217 FLLVKSLDNVVKLWEYT 233
+ S D V +W+ T
Sbjct: 299 KIAAGSADRFVYVWDTT 315
Score = 51.6 bits (122), Expect = 2e-06
Identities = 52/219 (23%), Positives = 88/219 (39%), Gaps = 32/219 (14%)
Query: 103 IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG-TALKTMSAHSDAVVSIDIP 161
I L GH V ++ G+ L S+ D I W+V T+ HS AV+ +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY- 117
Query: 162 KFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVK 221
D S+L S S D + ++D+E+G +K L ++ S ++ + +
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVN-------SCYPARKSPQLVCTG 170
Query: 222 SLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCV 281
S D VKLW+ + ++TF +Q L + + D +ISG + V
Sbjct: 171 SDDGTVKLWDIRKKAAIQTFQNTYQV----------LAVTFNDTSDQ-IISGGIDNDIKV 219
Query: 282 WNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGE 320
W++ +N ++ D V LSL+ E
Sbjct: 220 WDL------------RQNKLTYTMRGHADSVTGLSLSSE 246
>At5g14530 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase complex and RNA
cleavage factor II complex subunit SWD2
Length = 330
Score = 62.4 bits (150), Expect = 9e-10
Identities = 60/274 (21%), Positives = 120/274 (42%), Gaps = 26/274 (9%)
Query: 28 GKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASG 87
GKI + D L+ ++ + +++I+++K +K+T K + +C++ +
Sbjct: 25 GKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKHGTDRVCFTHHPSSLICS 84
Query: 88 SEDFTVEITH------IIYGR--IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV 139
S + +E T +Y +R GH V+S+C + + S S+D S++ W +
Sbjct: 85 SR-YNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSLDRSVRLWDL 143
Query: 140 LSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIA 199
+ V+ D +I G G +++FD+ C +D +
Sbjct: 144 RVNACQGILHLRGRPAVAYDQQGLVFAIAMEG---GAVKLFDS---RCYDKGPFDTFLVG 197
Query: 200 EDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF-LWPHQETKAKLKYNCGL 258
D ++ +KFS +GK +L+ + +N + + + RG F L P Q T + +
Sbjct: 198 GD-TAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEPSQGTPIEATFT--- 253
Query: 259 ELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQK 292
P GK V+SG+ G++ WN+ + + V +
Sbjct: 254 ----PDGK--YVLSGSGDGTLHAWNIENPSEVAR 281
>At4g34460 [R] KOG0286 G-protein beta subunit
Length = 377
Score = 62.4 bits (150), Expect = 9e-10
Identities = 59/228 (25%), Positives = 108/228 (46%), Gaps = 31/228 (13%)
Query: 33 SCQISPDGELIAICQNTDML--VYEISSSK-------MMKLTTTHKECINCLCWSP--DS 81
+C SP+G+ +A C D + ++ +SS+ + ++ T H+ ++C + P D+
Sbjct: 112 TCAFSPNGQSVA-CGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDA 170
Query: 82 KCIASGSE------DFTVEITHIIYGRIRRLMGHTAPVISICYNNKG-NILCSSSMDESI 134
I S + D T + ++G + GHTA V+S+ + N S S D +
Sbjct: 171 HLITSSGDQTCILWDVTTGLKTSVFGGEFQ-SGHTADVLSVSISGSNPNWFISGSCDSTA 229
Query: 135 KEWHVLSGT-ALKTMSAHSDAVVSIDIPKF--DSSILSSGSYDGLIRIFDTESGHCLKTL 191
+ W + + A++T H V ++ KF D +GS DG R++D +GH L+
Sbjct: 230 RLWDTRAASRAVRTFHGHEGDVNTV---KFFPDGYRFGTGSDDGTCRLYDIRTGHQLQ-- 284
Query: 192 TYDKDWIAEDGVVPISTVKFSRNGKFLLV-KSLDNVVKLWEYTRGTVV 238
Y E+G P++++ FS +G+ L + +N +W+ G VV
Sbjct: 285 VYQPHGDGENG--PVTSIAFSVSGRLLFAGYASNNTCYVWDTLLGEVV 330
>SPBC2G2.18 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 775
Score = 62.0 bits (149), Expect = 1e-09
Identities = 56/206 (27%), Positives = 95/206 (45%), Gaps = 27/206 (13%)
Query: 88 SEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKT 147
+ DFT T+ Y IR L GHT V + G+++ S+S D +++ W +G L
Sbjct: 557 NNDFTSATTNPFY--IRTLRGHTDSVREVAC--LGDLIVSASYDGTLRVWKASTGVCLHV 612
Query: 148 MSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPIS 207
+ H V S+ I +S+G+ D IRI++ ESG L+TL + +S
Sbjct: 613 LRGHVGRVYSVTINPSRQQCISAGT-DAKIRIWNLESGELLQTLHGHSNL--------VS 663
Query: 208 TVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKD 267
V F++N D +++W+ G+ R L C L I+ Q +
Sbjct: 664 QVTFNQNILVSASAPPDTSLRVWDLNTGS-CRDIL------------KCPLGHIFFQHDE 710
Query: 268 PLVISGNDSGSMCVWNVYSKNLVQKI 293
V+SG+ S ++ +W++ S LV+ +
Sbjct: 711 SKVVSGSHS-TLQLWDIRSGKLVRDL 735
Score = 50.8 bits (120), Expect = 3e-06
Identities = 43/162 (26%), Positives = 72/162 (43%), Gaps = 18/162 (11%)
Query: 84 IASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG 142
I S S D T+ + G + L GH V S+ N S+ D I+ W++ SG
Sbjct: 590 IVSASYDGTLRVWKASTGVCLHVLRGHVGRVYSVTINPSRQQCISAGTDAKIRIWNLESG 649
Query: 143 TALKTMSAHSDAVVSIDIPKFDSSILSSGSY--DGLIRIFDTESGHCLKTLTYDKDWIAE 200
L+T+ HS+ V + F+ +IL S S D +R++D +G C L
Sbjct: 650 ELLQTLHGHSNLVSQV---TFNQNILVSASAPPDTSLRVWDLNTGSCRDILK-------- 698
Query: 201 DGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFL 242
P+ + F ++ + +V + ++LW+ G +VR L
Sbjct: 699 ---CPLGHI-FFQHDESKVVSGSHSTLQLWDIRSGKLVRDLL 736
>SPAC18B11.10 [R] KOG0266 WD40 repeat-containing protein
Length = 614
Score = 62.0 bits (149), Expect = 1e-09
Identities = 65/293 (22%), Positives = 123/293 (41%), Gaps = 48/293 (16%)
Query: 24 LPASGKISTSCQISPDGEL-----IAICQNTDM----------LVYEISSSKMMKL---- 64
+ AS + Q PDGE IA +T+ + Y + ++ +
Sbjct: 249 MTASANAGSISQAGPDGEYQGREQIAPVSDTEAARKTTSQSWYVTYNPACKRVFNINLVH 308
Query: 65 TTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAP-------VISIC 117
T H + C+ +S + K +A+G + + G+ + +P V +I
Sbjct: 309 TLEHPSVVCCVKFSNNGKYLATGCNQ-AANVFDVQTGKKLFTLHEESPDPSRDLYVRTIA 367
Query: 118 YNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLI 177
++ G L + + D IK W + + S H + S+D + + SGS D
Sbjct: 368 FSPDGKYLVTGTEDRQIKLWDLSTQKVRYVFSGHEQDIYSLDF-SHNGRFIVSGSGDRTA 426
Query: 178 RIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTV 237
R++D E+G C+ L E+GV I+ S N +F+ V SLD ++++W + GT+
Sbjct: 427 RLWDVETGQCILKLEI------ENGVTAIA---ISPNDQFIAVGSLDQIIRVWSVS-GTL 476
Query: 238 VRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLV 290
V L H+E+ + ++ +++SG+ ++ VW + + V
Sbjct: 477 VER-LEGHKESVYSIAFS---------PDSSILLSGSLDKTIKVWELQATRSV 519
Score = 57.4 bits (137), Expect = 3e-08
Identities = 45/171 (26%), Positives = 78/171 (45%), Gaps = 21/171 (12%)
Query: 72 INCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMD 131
+ + SP+ + IA GS D + + + + RL GH V SI ++ +IL S S+D
Sbjct: 446 VTAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLD 505
Query: 132 ESIKEWHVLS------------GTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRI 179
++IK W + + G T + H+D V+S+ + DS SGS D ++
Sbjct: 506 KTIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSP-DSRWGLSGSKDRSMQF 564
Query: 180 FDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLW 230
+D ++G T K+ + +V FS +G+ S D ++W
Sbjct: 565 WDLQTGQSYLTCQGHKN--------SVISVCFSPDGRQFASGSGDLRARIW 607
Score = 56.2 bits (134), Expect = 6e-08
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 14/165 (8%)
Query: 32 TSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDF 91
T+ ISP+ + IA+ ++ S +++ HKE + + +SPDS + SGS D
Sbjct: 447 TAIAISPNDQFIAVGSLDQIIRVWSVSGTLVERLEGHKESVYSIAFSPDSSILLSGSLDK 506
Query: 92 TVEITHIIYGRIRRL-------------MGHTAPVISICYNNKGNILCSSSMDESIKEWH 138
T+++ + R L GHT V+S+ + S S D S++ W
Sbjct: 507 TIKVWELQATRSVGLSAIKPEGICKATYTGHTDFVLSVAVSPDSRWGLSGSKDRSMQFWD 566
Query: 139 VLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTE 183
+ +G + T H ++V+S+ D +SGS D RI+ +
Sbjct: 567 LQTGQSYLTCQGHKNSVISVCFSP-DGRQFASGSGDLRARIWSID 610
>Hs13629793 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 357
Score = 62.0 bits (149), Expect = 1e-09
Identities = 63/293 (21%), Positives = 119/293 (40%), Gaps = 49/293 (16%)
Query: 64 LTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG---RIRRLMGHTAPVISICYNN 120
L + H+ + C + P+ +AS D + + ++ YG L GH+ V+ + YN
Sbjct: 61 LLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNV-YGDCDNYATLKGHSGAVMELHYNT 119
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
G++L S+S D+++ W +G +K + H+ V S + ++ +GS DG ++++
Sbjct: 120 DGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLW 179
Query: 181 DTESGHCLKTL--TYD---------KDWIAEDGV----------------------VPIS 207
D ++T TY D I G+ ++
Sbjct: 180 DIRKKAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVT 239
Query: 208 TVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKD 267
+ S G +LL ++DN V++W+ + Q + N P G
Sbjct: 240 GLSLSSEGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKNLLRCSWSPDGSK 299
Query: 268 PLVISGNDSGSMCVWNVYSKNLVQKIDEK---------HRNSPLISISASYDK 311
+ +G+ + VW+ S+ ++ K+ H + P+I ISAS DK
Sbjct: 300 --IAAGSADRFVYVWDTTSRRILYKLPGHAGSINEVAFHPDEPII-ISASSDK 349
Score = 52.8 bits (125), Expect = 7e-07
Identities = 40/197 (20%), Positives = 85/197 (42%), Gaps = 10/197 (5%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECIN-CLCWSPDSKCIASGSEDFTVEITHIIY 100
L + + + V++ + + +K H +N C + + +GS+D TV++ I
Sbjct: 124 LFSASTDKTVAVWDSETGERVKRLKGHTSFVNSCYPARRGPQLVCTGSDDGTVKLWDIRK 183
Query: 101 GRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDI 160
+ +T V+++ +N+ + + S +D IK W + TM H+D+V + +
Sbjct: 184 KAAIQTFQNTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHADSVTGLSL 243
Query: 161 PKFDSSILSSGSYDGLIRIFDTE----SGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGK 216
+ S L S + D +R++D C+K + ++ + +S +G
Sbjct: 244 SS-EGSYLLSNAMDNTVRVWDVRPFAPKERCVKIFQGNVHNFEKN----LLRCSWSPDGS 298
Query: 217 FLLVKSLDNVVKLWEYT 233
+ S D V +W+ T
Sbjct: 299 KIAAGSADRFVYVWDTT 315
Score = 52.4 bits (124), Expect = 9e-07
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 32/219 (14%)
Query: 103 IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG-TALKTMSAHSDAVVSIDIP 161
I L GH V ++ G+ L S+ D I W+V T+ HS AV+ +
Sbjct: 59 IMLLSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYGDCDNYATLKGHSGAVMELHY- 117
Query: 162 KFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVK 221
D S+L S S D + ++D+E+G +K L ++ S R + +
Sbjct: 118 NTDGSMLFSASTDKTVAVWDSETGERVKRLKGHTSFVN-------SCYPARRGPQLVCTG 170
Query: 222 SLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCV 281
S D VKLW+ + ++TF +Q L + + D +ISG + V
Sbjct: 171 SDDGTVKLWDIRKKAAIQTFQNTYQV----------LAVTFNDTSDQ-IISGGIDNDIKV 219
Query: 282 WNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGE 320
W++ +N ++ D V LSL+ E
Sbjct: 220 WDL------------RQNKLTYTMRGHADSVTGLSLSSE 246
>7301796 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 436
Score = 62.0 bits (149), Expect = 1e-09
Identities = 58/272 (21%), Positives = 111/272 (40%), Gaps = 42/272 (15%)
Query: 74 CLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM------------------GHTAPVIS 115
CL S D C ++ T ++ HI+ G + G+ S
Sbjct: 102 CLTGSYDRTCHVINTQ--TAQVEHILSGHDNVVFSVGFNFPHWLVYLQSGGSGNNLTTFS 159
Query: 116 ICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDG 175
I +++K + + S D + K W SG +L T H+ +V+ + D +++ S DG
Sbjct: 160 IIFSDK---IVTGSFDGTAKVWSATSGQSLCTFYGHTAELVAAEFHPVDGKSIATASLDG 216
Query: 176 LIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
RI+D E+ H L+ LT+ + +F+R+G+ LL S D+ +W+ R
Sbjct: 217 SARIYDVETSHELQQLTHHG--------AEVIAARFNRDGQMLLTGSFDHSAAIWD-VRS 267
Query: 236 TVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDE 295
+ L H + +N L+ +G+ + +W+ + +
Sbjct: 268 KSLGHQLRGHSAELSNCVWNF---------SGSLIATGSLDNTARIWDTRKLDQELYLAA 318
Query: 296 KHRNSPL-ISISASYDKVATLSLNGECNLFRV 326
+H + L +S A+ +AT S + ++R+
Sbjct: 319 RHSDEVLDVSFDAAGQLLATCSSDCTARVWRL 350
Score = 57.0 bits (136), Expect = 4e-08
Identities = 49/197 (24%), Positives = 93/197 (46%), Gaps = 13/197 (6%)
Query: 39 DGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITH 97
DG+ IA + +Y++ +S ++ T H + ++ D + + +GS D + I
Sbjct: 205 DGKSIATASLDGSARIYDVETSHELQQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWD 264
Query: 98 IIYGRI-RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLS-GTALKTMSAHSDAV 155
+ + +L GH+A + + +N G+++ + S+D + + W L + HSD V
Sbjct: 265 VRSKSLGHQLRGHSAELSNCVWNFSGSLIATGSLDNTARIWDTRKLDQELYLAARHSDEV 324
Query: 156 VSIDIPKFDSS--ILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSR 213
+ + FD++ +L++ S D R++ E L+ L+ E +S V FS
Sbjct: 325 LDVS---FDAAGQLLATCSSDCTARVWRLEGSSELEMLSLMAGHSDE-----VSKVCFSP 376
Query: 214 NGKFLLVKSLDNVVKLW 230
+G LL S DN +LW
Sbjct: 377 SGCMLLTASADNTARLW 393
Score = 51.6 bits (122), Expect = 2e-06
Identities = 50/216 (23%), Positives = 93/216 (42%), Gaps = 17/216 (7%)
Query: 22 QVLPASGKISTSCQISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHK-ECINCLCWSP 79
Q L G + + + DG+++ + ++++ S + H E NC+ W+
Sbjct: 230 QQLTHHGAEVIAARFNRDGQMLLTGSFDHSAAIWDVRSKSLGHQLRGHSAELSNCV-WNF 288
Query: 80 DSKCIASGSEDFTVEI--THIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEW 137
IA+GS D T I T + + H+ V+ + ++ G +L + S D + + W
Sbjct: 289 SGSLIATGSLDNTARIWDTRKLDQELYLAARHSDEVLDVSFDAAGQLLATCSSDCTARVW 348
Query: 138 HVLSGTALKTMS---AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYD 194
+ + L+ +S HSD V + +L++ S D R++ TESG C + L
Sbjct: 349 RLEGSSELEMLSLMAGHSDEVSKVCFSPSGCMLLTA-SADNTARLWLTESGQCSQVLA-- 405
Query: 195 KDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLW 230
+G + + +S G +L S DN + W
Sbjct: 406 ----GHEG--EVFSCAYSYAGDAILTASKDNSCRFW 435
>7297395 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase complex and RNA
cleavage factor II complex subunit SWD2
Length = 317
Score = 62.0 bits (149), Expect = 1e-09
Identities = 58/267 (21%), Positives = 123/267 (45%), Gaps = 21/267 (7%)
Query: 37 SPDGELIAICQNTDMLV-YEISSSKMMKLTTTHKECINCLCWS-PDSKCIASGSE-DFTV 93
+P+GE + C D +V Y+ + + K ++ + ++ ++ I S ++ D T+
Sbjct: 32 APNGEHLISCSEDDQIVIYDCEKGTQSRTVNSKKYGVDLIHFTHANNTAIHSSTKVDDTI 91
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+ + +R GHT VIS+C + + S S+D++++ W + S M
Sbjct: 92 RYLSLHDNKYLRYFPGHTKKVISLCISPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSG 151
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFS 212
+ + D + I ++G I+++D S +T+ + ++ + +KFS
Sbjct: 152 RPIAAYDP---EGLIFAAGVNSESIKLYDLRSFDKGPFVTFK---LNQEKECDWTGLKFS 205
Query: 213 RNGKFLLVKSLDNVVKLWEYTRGTVVRTFL-WPHQETKAKLKYNCGLELIYPQGKD-PLV 270
R+GK +L+ + +V++L + GT ++TF +P+ N G+ + D +
Sbjct: 206 RDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPN---------NKGIPIEASFSPDSQFI 256
Query: 271 ISGNDSGSMCVWNVYSKNLVQKIDEKH 297
SG+ G + +WN + N V ++ H
Sbjct: 257 FSGSTDGRVHIWNADTGNKVSVLNGDH 283
>7293972 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 553
Score = 62.0 bits (149), Expect = 1e-09
Identities = 42/195 (21%), Positives = 83/195 (42%), Gaps = 10/195 (5%)
Query: 38 PDGELIAI-CQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEIT 96
P G +A C ++ ++++ + H + ++CL + D + +G D +
Sbjct: 363 PSGRFLATACYDSSWRLWDLEQKTEVLHQEGHAKPVHCLSYHSDGSVLVTGGLDAFGRVW 422
Query: 97 HIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
+ GR I L GH V + ++ G + + S D + K W + + T+ AH++ +
Sbjct: 423 DLRTGRCIMFLEGHLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYTIPAHTNLI 482
Query: 156 VSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNG 215
+ + S L + SYD +I+ ++ LKTL + + + P N
Sbjct: 483 SDVKYQQECGSFLVTCSYDSTTKIWSNKTWQPLKTLQGHDNKVISVDIAP--------NS 534
Query: 216 KFLLVKSLDNVVKLW 230
+++ S D KLW
Sbjct: 535 QYIATTSFDRTFKLW 549
Score = 52.4 bits (124), Expect = 9e-07
Identities = 47/182 (25%), Positives = 77/182 (41%), Gaps = 14/182 (7%)
Query: 84 IASGSEDFTVEITHIIYGR-IRRLMGHTAPVIS-ICYNNKGNILCSSSMDESIKEWHVLS 141
+ASG D V++ I + GH +S + ++ G L ++ D S + W +
Sbjct: 325 MASGGHDGAVKLWGFNNEESIADITGHMPHRVSKVAFHPSGRFLATACYDSSWRLWDLEQ 384
Query: 142 GTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAED 201
T + H+ V + D S+L +G D R++D +G C+ L E
Sbjct: 385 KTEVLHQEGHAKPVHCLSYHS-DGSVLVTGGLDAFGRVWDLRTGRCIMFL--------EG 435
Query: 202 GVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKY--NCGLE 259
+ + V FS NG + S DN K+W+ R V T + H + +KY CG
Sbjct: 436 HLGAVFGVDFSPNGFHIATGSQDNTCKIWDLRRRQPVYT-IPAHTNLISDVKYQQECGSF 494
Query: 260 LI 261
L+
Sbjct: 495 LV 496
>SPAC12G12.14c [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 509
Score = 61.6 bits (148), Expect = 1e-09
Identities = 63/278 (22%), Positives = 120/278 (42%), Gaps = 28/278 (10%)
Query: 37 SPDGELIAICQNT-DMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
+PDG + +T + ++ + + +H + C WS D + + SG V+
Sbjct: 90 TPDGRRLLTGSSTGEFTLWNGLTFNFELINQSHDYAVRCAEWSTDGRWLISGDGGGMVKY 149
Query: 96 THIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
++ + H V + ++ + ++S D S+K W+ T ++ H V
Sbjct: 150 FEPNLNNVKIVQAHEMEVRDVAFSPNDSKFVTASDDGSLKVWNFHMSTEELKLTGHGWDV 209
Query: 156 VSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRN- 214
++D +L+SGS D L++ +D +G C+ TL K+ I + F +N
Sbjct: 210 KTVDWHP-SKGLLASGSKDNLVKFWDPRTGTCIATLHGHKNTIMQ--------ASFQKNF 260
Query: 215 -GKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNC-GLELIYPQGKDPLVIS 272
+L S D+ ++++ VR L H++ NC +YP L+ +
Sbjct: 261 GSNYLATVSRDSTCRVFDLRAMKDVRV-LRGHEK-----DVNCVTWHPLYPN----LLTT 310
Query: 273 GNDSGSMCVWNVYSKNLV--QKIDEKHRNSPLISISAS 308
G GS+ +++ L+ QK EKH P +++SAS
Sbjct: 311 GGSDGSVNHYSLDEPPLLSQQKYHEKH---PNVTLSAS 345
>Hs14150171 [S] KOG1407 WD40 repeat protein
Length = 351
Score = 61.6 bits (148), Expect = 1e-09
Identities = 55/205 (26%), Positives = 93/205 (44%), Gaps = 29/205 (14%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAP 112
++++ ++K + T E IN +CWSPD + IA G++D V R +
Sbjct: 126 IWDVRTTKCIATVNTKGENIN-ICWSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFE 184
Query: 113 VISICYNNKGNILCSSSMDESIKEWHVLSGTALK---TMSAHSDAVVSIDIPKFD--SSI 167
V I +NN N+ ++ + I ++LS LK +++AH + I KFD
Sbjct: 185 VNEISWNNDNNMFFLTNGNGCI---NILSYPELKPVQSINAHPSNCICI---KFDPMGKY 238
Query: 168 LSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVV 227
++GS D L+ ++D + C++ + DW P+ T+ FS +GK L S D+ +
Sbjct: 239 FATGSADALVSLWDVDELVCVRCFS-RLDW-------PVRTLSFSHDGKMLASASEDHFI 290
Query: 228 ---------KLWEYTRGTVVRTFLW 243
KLWE + T W
Sbjct: 291 DIAEVETGDKLWEVQCESPTFTVAW 315
>CE17294 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 473
Score = 61.6 bits (148), Expect = 1e-09
Identities = 70/314 (22%), Positives = 130/314 (41%), Gaps = 50/314 (15%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTD-MLVYEISSSKMMKLTTTHKECINCLCWSPDSK 82
+P G+ S Q SPDG +A M +++I + +HK + C+ WSPD+
Sbjct: 101 IPGHGEPVISAQFSPDGRGLASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPDAT 160
Query: 83 CIASGSEDFTVEITHIIYGRI--RRLMGHTAPVISICY-----NNKGNILCSSSMDESIK 135
IAS ++ + I + G + L H + S+ + + +L S D +I
Sbjct: 161 KIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGNIF 220
Query: 136 EWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDK 195
W + GT ++ +S H+ +V + ++ SGS D ++++ + G + +T
Sbjct: 221 IWDTVQGTVVRCLSGHTASVTCLRWG--GEGLIYSGSQDRTVKMWRADDGVMCRNMTGHA 278
Query: 196 DWI---AEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKL 252
WI A + + T F + + + +++ K+ A+
Sbjct: 279 HWINTLALNTDYALRTSCFEPSKRCIKPDTVEECQKV--------------------AQT 318
Query: 253 KYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLIS-------- 304
+Y LE+ G + LV SG+D ++ +WN K Q I+ + L++
Sbjct: 319 RYEAALEI---AGGERLV-SGSDDFTLFMWN--PKETKQSINRMTGHMQLVNQVVFSPDT 372
Query: 305 ---ISASYDKVATL 315
SAS+DK L
Sbjct: 373 RYIASASFDKSVKL 386
Score = 57.0 bits (136), Expect = 4e-08
Identities = 42/149 (28%), Positives = 75/149 (50%), Gaps = 11/149 (7%)
Query: 84 IASGSEDFTVEITHIIYGR--IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLS 141
+ SGS+DFT+ + + + I R+ GH V + ++ + S+S D+S+K W +
Sbjct: 332 LVSGSDDFTLFMWNPKETKQSINRMTGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRT 391
Query: 142 GTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAED 201
G L ++ H V + DS +L SGS D +++F+ ++ K+L YD ++
Sbjct: 392 GKYLASLRGHVGPVYQV-AWSADSRLLVSGSADSTLKVFELKT----KSLYYDLPGHGDE 446
Query: 202 GVVPISTVKFSRNGKFLLVKSLDNVVKLW 230
+ TV +S G ++ D V+KLW
Sbjct: 447 ----VFTVDWSPEGTKVVSGGKDKVLKLW 471
Score = 52.4 bits (124), Expect = 9e-07
Identities = 29/107 (27%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 66 TTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNI 124
T H + +N + +SPD++ IAS S D +V++ G+ + L GH PV + ++ +
Sbjct: 357 TGHMQLVNQVVFSPDTRYIASASFDKSVKLWCGRTGKYLASLRGHVGPVYQVAWSADSRL 416
Query: 125 LCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
L S S D ++K + + + + + H D V ++D + ++S G
Sbjct: 417 LVSGSADSTLKVFELKTKSLYYDLPGHGDEVFTVDWSPEGTKVVSGG 463
>CE27713 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 331
Score = 61.2 bits (147), Expect = 2e-09
Identities = 53/256 (20%), Positives = 104/256 (39%), Gaps = 45/256 (17%)
Query: 77 WSPDSKCIASGSEDFTVEITHIIYGRIRR---LMGHTAPVISICYNNKGNILCSSSMDES 133
+S D +AS D + + ++ +G L GH ++ + +N + L S+ D++
Sbjct: 44 FSSDGSFLASAGYDQQIFLWNV-FGECENFAVLKGHKGAIMEVKFNADSSHLVSAGTDKT 102
Query: 134 IKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLT- 192
++ W + +G+ ++ +H+D V S+D+ + ++ S S DG + + D S K
Sbjct: 103 VRVWDMETGSCIRNFKSHTDIVNSVDVNRRGPQMICSASDDGTVMVHDMRSKEAAKKFIC 162
Query: 193 -YDKDWI----AEDGVV---------------------------PISTVKFSRNGKFLLV 220
Y + + A D V+ I+++ S NG FLL
Sbjct: 163 KYQQTAVTFNDAADNVICGGIDNQIKVWDMLRNDVRYVLSGHRDTITSLSVSHNGNFLLS 222
Query: 221 KSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYN---CGLELIYPQGKDPLVISGNDSG 277
S+D + W+ + + +Q + N CG +D + +G+
Sbjct: 223 NSMDCSLMSWDIRPFVPAQRLVARYQGASHNFEKNLLKCGW-----SPRDNYITAGSADR 277
Query: 278 SMCVWNVYSKNLVQKI 293
+ VWN S+ V K+
Sbjct: 278 FVYVWNAKSRACVYKL 293
Score = 55.1 bits (131), Expect = 1e-07
Identities = 49/220 (22%), Positives = 100/220 (45%), Gaps = 24/220 (10%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTA-LKTMSAHSDAVVSIDIPKFD 164
L GH + + +++ G+ L S+ D+ I W+V + H A++ + D
Sbjct: 32 LQGHGGEIYTSQFSSDGSFLASAGYDQQIFLWNVFGECENFAVLKGHKGAIMEVKF-NAD 90
Query: 165 SSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNG-KFLLVKSL 223
SS L S D +R++D E+G C++ D +++V +R G + + S
Sbjct: 91 SSHLVSAGTDKTVRVWDMETGSCIRNFKSHTD--------IVNSVDVNRRGPQMICSASD 142
Query: 224 DNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWN 283
D V + + + F+ +Q+T + + D ++ G D+ + VW+
Sbjct: 143 DGTVMVHDMRSKEAAKKFICKYQQT----------AVTFNDAADNVICGGIDN-QIKVWD 191
Query: 284 VYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGECNL 323
+ +N V+ + HR++ + S+S S++ LS + +C+L
Sbjct: 192 ML-RNDVRYVLSGHRDT-ITSLSVSHNGNFLLSNSMDCSL 229
>CE21113 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 809
Score = 61.2 bits (147), Expect = 2e-09
Identities = 56/265 (21%), Positives = 108/265 (40%), Gaps = 22/265 (8%)
Query: 37 SPDGE-LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
SP+G+ LI CQ + ++ ++ + H I L W+ + + + S + V+
Sbjct: 142 SPEGKRLITGCQTGEFTLWNGTAFNFETILQAHDSAIRALKWASNEQWLLSADQGGYVKY 201
Query: 96 THIIYGRIRRLMGHTAPVI-SICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDA 154
H I + + ++S D + + W T + + H
Sbjct: 202 WQPNMNNAHMFSAHKDEAIRGLAFAPTDVKFATASDDGTARVWDFARYTEERVLRGHGAE 261
Query: 155 VVSIDIPKFDSSILSSGSYDGL--IRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFS 212
V ID ++++GS D ++I+D +SG CL TL K + V+F+
Sbjct: 262 VRCIDWHP-TKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKS--------SVMAVEFN 312
Query: 213 RNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVIS 272
+NG +LL D++VK+++ +RT+ +E + L + + L +S
Sbjct: 313 KNGNWLLTGGRDHLVKMYDIRMMKEMRTYRAHKKEV---------ISLAWHPIHEGLFVS 363
Query: 273 GNDSGSMCVWNVYSKNLVQKIDEKH 297
G GS+ W V + + ++ H
Sbjct: 364 GGGDGSIVYWMVDGEKEIGLLEHAH 388
Score = 50.8 bits (120), Expect = 3e-06
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 10/170 (5%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFT--VEITHIIYGR-IRRLMGHTAPVISICYNNKGNI 124
H + C+ W P IA+GS D V+I G + L H + V+++ +N GN
Sbjct: 258 HGAEVRCIDWHPTKGLIATGSRDTQQPVKIWDPKSGSCLATLQEHKSSVMAVEFNKNGNW 317
Query: 125 LCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTES 184
L + D +K + + ++T AH V+S+ + SG DG I + +
Sbjct: 318 LLTGGRDHLVKMYDIRMMKEMRTYRAHKKEVISLAWHPIHEGLFVSGGGDGSIVYWMVDG 377
Query: 185 GHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTR 234
+ L + D I ++K+ G L S DN K W R
Sbjct: 378 EKEIGLLEHAHD-------QAIWSMKWHPLGHILATGSNDNNTKFWARNR 420
>CE02043 [R] KOG0289 mRNA splicing factor
Length = 509
Score = 61.2 bits (147), Expect = 2e-09
Identities = 48/194 (24%), Positives = 88/194 (44%), Gaps = 11/194 (5%)
Query: 51 MLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMG-H 109
+++Y+ ++M+ H + IN + PD+ S S D + + + ++ H
Sbjct: 250 VVLYDYEKEQVMQTFKGHNKKINAVVLHPDNITAISASADSHIRVWSATDSSSKAIIDVH 309
Query: 110 TAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF--DSSI 167
APV I N G+ + S+S D + SG +L +S + +++ +F D I
Sbjct: 310 QAPVTDISLNASGDYILSASDDSYWAFSDIRSGKSLCKVSVEPGSQIAVHSIEFHPDGLI 369
Query: 168 LSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVV 227
+G+ D +++I+D LK T + V ++ FS NG +L S D V
Sbjct: 370 FGTGAADAVVKIWD------LKNQTVAAAFPGHTAAV--RSIAFSENGYYLATGSEDGEV 421
Query: 228 KLWEYTRGTVVRTF 241
KLW+ + ++TF
Sbjct: 422 KLWDLRKLKNLKTF 435
>7292737 [A] KOG0285 Pleiotropic regulator 1
Length = 482
Score = 61.2 bits (147), Expect = 2e-09
Identities = 46/232 (19%), Positives = 101/232 (42%), Gaps = 22/232 (9%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTA 111
+++++S K+ T H + + S + S ED V+ + Y + IR GH +
Sbjct: 198 IWDLASGKLKLSLTGHVSTVRGVAVSTKHPYLFSCGEDRQVKCWDLEYNKVIRHYHGHLS 257
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
V S+ + ++L +S D + + W + + + T++ H++ V S+ + I+ +G
Sbjct: 258 AVYSLALHPTIDVLATSGRDSTARIWDMRTKANVHTLTGHTNTVASVVAQATNPQII-TG 316
Query: 172 SYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
S+D +R++D +G + TLT K + + P ++ + + +K W
Sbjct: 317 SHDSTVRLWDLAAGKSVCTLTNHKKSVRSIVLHP---------SLYMFASASPDNIKQWR 367
Query: 232 YTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWN 283
G V+ + + + + +++SG D+G+M W+
Sbjct: 368 CPEGKFVQ-----------NISGHTSIVNCMAANSEGVLVSGGDNGTMFFWD 408
>At5g64730 [S] KOG0316 Conserved WD40 repeat-containing protein
Length = 343
Score = 60.8 bits (146), Expect = 3e-09
Identities = 50/235 (21%), Positives = 104/235 (43%), Gaps = 24/235 (10%)
Query: 61 MMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYN 119
++K +H + + + D+ S D V + GR IR+ GH V ++ +N
Sbjct: 52 LIKTYKSHGREVRDVHVTSDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFN 111
Query: 120 NKGNILCSSSMDESIKEWHVLSGTA--LKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLI 177
+ +++ S+ D S++ W S + ++ + D V+S+ + K + + GS DG +
Sbjct: 112 DSSSVVVSAGFDRSLRVWDCRSHSVEPVQIIDTFLDTVMSVVLTKTE---IIGGSVDGTV 168
Query: 178 RIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTV 237
R FD G ++++ P++ + S +G +L LD+ ++L + T G +
Sbjct: 169 RTFDMRIGR----------EMSDNLGQPVNCISISNDGNCVLAGCLDSTLRLLDRTTGEL 218
Query: 238 VRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQK 292
++ + K +C L D VI G++ G + W++ ++ K
Sbjct: 219 LQVY---KGHISKSFKTDCCL-----TNSDAHVIGGSEDGLVFFWDLVDAKVLSK 265
>7296187 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 481
Score = 60.8 bits (146), Expect = 3e-09
Identities = 35/140 (25%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG 101
L++ + + ++ + +K ++ T H+ +N + +SPD K IAS S D +V + G
Sbjct: 341 LVSCSDDNTLYLWRNNQNKCVERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDG 400
Query: 102 R-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDI 160
+ + GH V ++ ++ ++ S S D ++K W V + + + H+D V +D
Sbjct: 401 QYMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQELPGHADEVFGVDW 460
Query: 161 PKFDSSILSSGSYDGLIRIF 180
D S ++SG D +I+++
Sbjct: 461 AP-DGSRVASGGKDKVIKLW 479
Score = 58.5 bits (140), Expect = 1e-08
Identities = 70/347 (20%), Positives = 132/347 (37%), Gaps = 83/347 (23%)
Query: 24 LPASGKISTSCQISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSK 82
+P + S SPDG +A +T + ++++++ T HK+ + C+ W+PD K
Sbjct: 108 MPGHAEAVVSLNFSPDGAHLASGSGDTTVRLWDLNTETPHFTCTGHKQWVLCVSWAPDGK 167
Query: 83 CIASGSEDFTVEITHIIYG--RIRRLMGHTAPVISICY-----NNKGNILCSSSMDESIK 135
+ASG + ++ I G + R L GH + + + + + L S+S D +
Sbjct: 168 RLASGCKAGSIIIWDPETGQQKGRPLSGHKKHINCLAWEPYHRDPECRKLASASGDGDCR 227
Query: 136 EWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDK 195
W V G L ++ H++AV ++ + ++ + S D ++++ G +T +
Sbjct: 228 IWDVKLGQCLMNIAGHTNAVTAVRWG--GAGLIYTSSKDRTVKMWRAADGILCRTFSGHA 285
Query: 196 DWIAEDGVVPISTVKFSRNGKFLLVK---------------------------------- 221
W+ + +ST R G F VK
Sbjct: 286 HWVNN---IALSTDYVLRTGPFHPVKDRSKSHLSLSTEELQESALKRYQAVCPDEVESLV 342
Query: 222 --SLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDP----------- 268
S DN + LW + V + HQ +KY+ ++LI D
Sbjct: 343 SCSDDNTLYLWRNNQNKCVER-MTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQ 401
Query: 269 ----------------------LVISGNDSGSMCVWNVYSKNLVQKI 293
L++SG+ ++ VW+V +K L Q++
Sbjct: 402 YMATFRGHVQAVYTVAWSADSRLIVSGSKDSTLKVWSVQTKKLAQEL 448
Score = 50.4 bits (119), Expect = 3e-06
Identities = 31/130 (23%), Positives = 59/130 (44%), Gaps = 9/130 (6%)
Query: 103 IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPK 162
+ R+ GH V + Y+ ++ S+S D+S++ W G + T H AV ++
Sbjct: 361 VERMTGHQNVVNDVKYSPDVKLIASASFDKSVRLWRASDGQYMATFRGHVQAVYTVAWSA 420
Query: 163 FDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKS 222
DS ++ SGS D ++++ ++ + L D + V ++ +G +
Sbjct: 421 -DSRLIVSGSKDSTLKVWSVQTKKLAQELPGHAD--------EVFGVDWAPDGSRVASGG 471
Query: 223 LDNVVKLWEY 232
D V+KLW Y
Sbjct: 472 KDKVIKLWAY 481
>CE23942 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 550
Score = 60.5 bits (145), Expect = 3e-09
Identities = 69/302 (22%), Positives = 121/302 (39%), Gaps = 40/302 (13%)
Query: 17 LQFDKQVLPASGKISTSC-QISPDGELIAICQNTDMLV-YEISSSKMMKL---------- 64
L+ D ++ ++S C SPD + + C +V + + + K++ +
Sbjct: 128 LEDDLEISYKPHRLSPLCVAFSPDAKYVISCGKESSIVKFNVGTRKVVGIIKRTKKRAGV 187
Query: 65 ----TTTHKECINCLCWSPDSKCIASGSEDFTVE------ITHIIYG-----RIRRLMGH 109
T H I + SPD K IASG D V+ I I+ I+ L GH
Sbjct: 188 PEEPTNAHYGVIFTVAVSPDQKFIASGGFDQVVKAPKNMKILFQIWNFDSLEHIKDLSGH 247
Query: 110 TAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILS 169
P+ S+ + K N L S+S D S+K W + + TM H D V I + + +
Sbjct: 248 RGPIFSLTFQLKTNNLYSASQDRSVKMWDIDQLGLVDTMYGHQDGVQQIGVLS-KQRVAT 306
Query: 170 SGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKL 229
G D R++ E L + ++ ++ D V I+ F+ S D + L
Sbjct: 307 VGGRDRSARLWKVEDESQL-MFSGLQNCVSLDCVAMINEEHFATG-------SADGSIAL 358
Query: 230 WEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNL 289
W + + + H ++ L ++ L+ SG++ G + +W + S+N
Sbjct: 359 WSFWKKRALHVRKQAHGTQNGSGRWIVALAVL---PYSDLLASGSNEGELKLWKI-SENF 414
Query: 290 VQ 291
Q
Sbjct: 415 RQ 416
>CE17845 [R] KOG0286 G-protein beta subunit
Length = 356
Score = 60.5 bits (145), Expect = 3e-09
Identities = 53/209 (25%), Positives = 92/209 (43%), Gaps = 19/209 (9%)
Query: 33 SCQISPDGELIAICQNTDM------LVYEISSSKMMKLTTTHKECINCLCWSPDSKCIAS 86
+C SP ++IA C D L +E + + TH ++C + I +
Sbjct: 115 ACAFSPSSQMIA-CGGLDNKCSVVPLSFEDDIIQKKRQVATHTSYMSCCTFLRSDNLILT 173
Query: 87 GSEDFTVEITHIIYGR-IRRLMGHTAPVISICYN--NKGNILCSSSMDESIKEWHVLSGT 143
GS D T I + G+ I+ GHT V +I + GN S+ D+ W + SG
Sbjct: 174 GSGDSTCAIWDVESGQLIQNFHGHTGDVFAIDVPKCDTGNTFISAGADKHSLVWDIRSGQ 233
Query: 144 ALKTMSAHSDAVVSIDI-PKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDG 202
+++ H + ++ P D+ ++GS D R+FD + + Y+K+ I
Sbjct: 234 CVQSFEGHEADINTVRFHPNGDA--FATGSDDATCRLFDLRADR--QVCVYEKESI---- 285
Query: 203 VVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
+ P++ V FS +G+ L D V +W+
Sbjct: 286 LFPVNGVDFSLSGRILFAGYGDYRVGVWD 314
Score = 57.8 bits (138), Expect = 2e-08
Identities = 45/197 (22%), Positives = 90/197 (44%), Gaps = 16/197 (8%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI--- 98
+++ Q+ ++V++ ++ T + +SP S+ IA G D + +
Sbjct: 83 IVSSSQDGKVIVWDGFTTNKEHALTMPTTWVMACAFSPSSQMIACGGLDNKCSVVPLSFE 142
Query: 99 --IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVV 156
I + R++ HT+ + + N++ + S D + W V SG ++ H+ V
Sbjct: 143 DDIIQKKRQVATHTSYMSCCTFLRSDNLILTGSGDSTCAIWDVESGQLIQNFHGHTGDVF 202
Query: 157 SIDIPKFD--SSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRN 214
+ID+PK D ++ +S+G+ D ++D SG C+++ E I+TV+F N
Sbjct: 203 AIDVPKCDTGNTFISAGA-DKHSLVWDIRSGQCVQSF--------EGHEADINTVRFHPN 253
Query: 215 GKFLLVKSLDNVVKLWE 231
G S D +L++
Sbjct: 254 GDAFATGSDDATCRLFD 270
>7303694 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 949
Score = 60.5 bits (145), Expect = 3e-09
Identities = 45/225 (20%), Positives = 90/225 (40%), Gaps = 17/225 (7%)
Query: 103 IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPK 162
I + GH++ + I Y++ G + + D +K W+ S T S H+ V I +
Sbjct: 386 IMKQQGHSSEMTCIAYSSDGQFIATGGEDSKVKLWNTQSSFCFVTFSEHTSGVTGIQFSR 445
Query: 163 FDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKS 222
+ L S S DG +R FD +T T S V +G+ ++
Sbjct: 446 -NKKFLVSSSLDGTVRAFDVNRYRNFRTFT-------SPNPAQFSCVAVDYSGELVVAGG 497
Query: 223 LDNV-VKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCV 281
D + LW G ++ + H+ + ++ P ++SG+ ++ +
Sbjct: 498 QDVFDIFLWSVKTGKLLE-IISGHEGPVVSIAFS-------PVATSSTLVSGSWDKTVKI 549
Query: 282 WNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGECNLFRV 326
WN N + + + ++ S S +++A +L+G +F +
Sbjct: 550 WNCLESNSEHETIDAVSDVTNVTFSPSGEEIAVATLSGNITIFDI 594
Score = 54.7 bits (130), Expect = 2e-07
Identities = 65/320 (20%), Positives = 127/320 (39%), Gaps = 68/320 (21%)
Query: 40 GELIAICQNT--DMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI-- 95
G+ +A+ +LV+E S + + H + C+ +S D + IA+G ED V++
Sbjct: 362 GDWVALASREIGQLLVWEWQSEQYIMKQQGHSSEMTCIAYSSDGQFIATGGEDSKVKLWN 421
Query: 96 THIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKE------------------- 136
T + + HT+ V I ++ L SSS+D +++
Sbjct: 422 TQSSFCFV-TFSEHTSGVTGIQFSRNKKFLVSSSLDGTVRAFDVNRYRNFRTFTSPNPAQ 480
Query: 137 -------------------------WHVLSGTALKTMSAHSDAVVSIDI-PKFDSSILSS 170
W V +G L+ +S H VVSI P SS L S
Sbjct: 481 FSCVAVDYSGELVVAGGQDVFDIFLWSVKTGKLLEIISGHEGPVVSIAFSPVATSSTLVS 540
Query: 171 GSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLW 230
GS+D ++I+ +CL++ + + D V ++ V FS +G+ + V +L + ++
Sbjct: 541 GSWDKTVKIW-----NCLES---NSEHETIDAVSDVTNVTFSPSGEEIAVATLSGNITIF 592
Query: 231 EYTRGTVVRTFLWPHQETKAKLKYNC----------GLELIYPQGKDPLVISGNDSGSMC 280
+ V T + + +L+ + I +++ S ++C
Sbjct: 593 DIKSAGQVTTIEGRNDLSAGRLETDIITARKNAQANYFSTIEYSADGECILAAGKSANIC 652
Query: 281 VWNVYSKNLVQKIDEKHRNS 300
+++V L++K + +S
Sbjct: 653 IYHVREAILLKKFEITQNHS 672
>SPBC32H8.07 [R] KOG0286 G-protein beta subunit
Length = 305
Score = 60.1 bits (144), Expect = 4e-09
Identities = 60/242 (24%), Positives = 105/242 (42%), Gaps = 41/242 (16%)
Query: 28 GKISTSCQISPDGE-LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIAS 86
GKI IS DG+ L++ N +LV+++ +S + I +SP +K IA+
Sbjct: 22 GKIP-DIDISTDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWIMTCAFSPSTKSIAA 80
Query: 87 GS-EDFTVEI-THIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTA 144
G +F V T + L+GH V Y + G++L S D++ W + A
Sbjct: 81 GGLNNFCVVYDTSVPDADPVELVGHAGFVSCCKYVDDGHLLTGSG-DKTCMFWDIEQAKA 139
Query: 145 LKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTL---TYDKDWI--- 198
+ + H +VS+D + ++ +G D L +++D + +C T T D + I
Sbjct: 140 ISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATFPGNTSDINSISFF 199
Query: 199 ---------AEDGVV--------------------PISTVKFSRNGKFLLVKSLDNVVKL 229
AEDG+ PI++V FS++GK L + + D ++
Sbjct: 200 PSNADFVTGAEDGIARCFDIRASAEIFQYSSPSSSPINSVLFSKSGKLLFI-AKDKTCEV 258
Query: 230 WE 231
W+
Sbjct: 259 WD 260
>At5g60940 [A] KOG0640 mRNA cleavage stimulating factor complex; subunit 1
Length = 429
Score = 60.1 bits (144), Expect = 4e-09
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 72/298 (24%)
Query: 63 KLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI------IYGR------IRRLMGHT 110
K + HK + C +SPD A+G D ++++ + I G IR H
Sbjct: 117 KTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDHA 176
Query: 111 APVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDA---------------V 155
P+ + ++ + IL SS+ D IK + TA + D +
Sbjct: 177 EPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEFLL 236
Query: 156 VSIDIP------------------------------KFDS--SILSSGSYDGLIRIFDTE 183
D P ++ S SI + S DG IR+FD
Sbjct: 237 AGTDHPIPHLYDVNTYQCFLPSNFPDSGVSGAINQVRYSSTGSIYITASKDGAIRLFDGV 296
Query: 184 SGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLW 243
S C++++ G +++ F+++ +F+L D+ VKLWE G +V+ +L
Sbjct: 297 SAKCVRSIGN------AHGKSEVTSAVFTKDQRFVLSSGKDSTVKLWEIGSGRMVKEYL- 349
Query: 244 PHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSP 301
+ KL+ + I+ ++ ++ S + W+ + + V K H +P
Sbjct: 350 --GAKRVKLR----SQAIFNDTEEFVISIDEASNEVVTWDARTADKVAKWPSNHNGAP 401
>SPCC5E4.03c [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 643
Score = 59.7 bits (143), Expect = 6e-09
Identities = 32/121 (26%), Positives = 62/121 (50%), Gaps = 2/121 (1%)
Query: 62 MKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNN 120
+++ H ++C+ + P+S + +GS D T + + G +R GHT PV ++
Sbjct: 456 LRVFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHSVRVFNGHTQPVTAVAIAP 515
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
G+ + S+ + I W + +G +KTM H + S+ + +S++L SG D +R +
Sbjct: 516 DGHTMASADSEGLIHLWDIGTGRRIKTMRGHRGNIYSLSFSR-ESTVLVSGGSDCTVRAW 574
Query: 181 D 181
D
Sbjct: 575 D 575
Score = 58.5 bits (140), Expect = 1e-08
Identities = 60/266 (22%), Positives = 106/266 (39%), Gaps = 35/266 (13%)
Query: 72 INCLCWSPDSKCIASGSEDFTVEITHIIYGRIR--------------RLMGHTAPVISIC 117
+NC +SPDS IA G ++ + + I + RL+ H+ PV
Sbjct: 327 MNCAEFSPDSTMIACGFQESYIRLWSIKADKKSLPKSTSVEDSDGSVRLLSHSGPVYGTT 386
Query: 118 YNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLI 177
++ L S S D S + W V + TAL H+ V + F ++ S+D
Sbjct: 387 FSPDNKYLLSCSEDASARLWSVDTKTALVAYKGHTGPVWDVAFGPF-GHYFATASHDQTA 445
Query: 178 RIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTV 237
+++ + + L+ + + + V F N ++L S D +LW+ RG
Sbjct: 446 QLWSCDHIYPLR--------VFAGHLSDVDCVTFHPNSAYVLTGSSDKTCRLWDVHRGHS 497
Query: 238 VRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKH 297
VR F Q A I P G + S + G + +W++ + + K H
Sbjct: 498 VRVFNGHTQPVTA--------VAIAPDGH--TMASADSEGLIHLWDIGTGRRI-KTMRGH 546
Query: 298 RNSPLISISASYDKVATLSLNGECNL 323
R + + S+S S + +S +C +
Sbjct: 547 RGN-IYSLSFSRESTVLVSGGSDCTV 571
>Hs8922428 [S] KOG0271 Notchless-like WD40 repeat-containing protein
Length = 485
Score = 59.7 bits (143), Expect = 6e-09
Identities = 37/122 (30%), Positives = 63/122 (51%), Gaps = 2/122 (1%)
Query: 60 KMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICY 118
K + T H+ IN + +SPDS+ +AS S D ++++ G+ + L GH A V I +
Sbjct: 363 KPLTRMTGHQALINQVLFSPDSRIVASASFDKSIKLWDGRTGKYLASLRGHVAAVYQIAW 422
Query: 119 NNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIR 178
+ +L S S D ++K W V + + H+D V ++D D ++SG D +R
Sbjct: 423 SADSRLLVSGSSDSTLKVWDVKAQKLAMDLPGHADEVYAVDWSP-DGQRVASGGKDKCLR 481
Query: 179 IF 180
I+
Sbjct: 482 IW 483
Score = 58.2 bits (139), Expect = 2e-08
Identities = 47/179 (26%), Positives = 80/179 (44%), Gaps = 15/179 (8%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIR-RLMGHTAPVISICYNNKGNILC 126
H E + + +SP K +ASGS D TV + GH V+SI ++ G L
Sbjct: 113 HSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLA 172
Query: 127 SSSMDESIKEWHVLSGTAL-KTMSAHSDAVVSIDIPKFDSS----ILSSGSYDGLIRIFD 181
S + I W +G + +T++ HS + + ++ ++S S DG +RI+D
Sbjct: 173 SGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWD 232
Query: 182 TESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRT 240
T +G C + LT ++ +++ +G L S D +K+W G + RT
Sbjct: 233 TTAGRCERILT--------GHTQSVTCLRWGGDG-LLYSASQDRTIKVWRAHDGVLCRT 282
Score = 56.6 bits (135), Expect = 5e-08
Identities = 60/259 (23%), Positives = 115/259 (44%), Gaps = 28/259 (10%)
Query: 33 SCQISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDF 91
S SP G+ +A +T + +++S+ H+ + + WSPD K +ASG ++
Sbjct: 119 SVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSPDGKKLASGCKNG 178
Query: 92 TVEITHIIYGRI--RRLMGHTAPVISICY-----NNKGNILCSSSMDESIKEWHVLSGTA 144
+ + G+ R L GH+ + + + N + + SSS D S++ W +G
Sbjct: 179 QILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHANPECRYVASSSKDGSVRIWDTTAGRC 238
Query: 145 LKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVV 204
+ ++ H+ +V + +L S S D I+++ G +TL W+ +
Sbjct: 239 ERILTGHTQSVTCLRWG--GDGLLYSASQDRTIKVWRAHDGVLCRTLQGHGHWV---NTM 293
Query: 205 PISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQ 264
+ST R G F ++ N L +G++ + +A +YN L+ Q
Sbjct: 294 ALSTDYALRTGAFEPAEASVNPQDL----QGSL------QELKERALSRYN----LVRGQ 339
Query: 265 GKDPLVISGNDSGSMCVWN 283
G + LV SG+D ++ +W+
Sbjct: 340 GPERLV-SGSDDFTLFLWS 357
Score = 56.6 bits (135), Expect = 5e-08
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GH+ VIS+ ++ G L S S D +++ W + + T T H V+SI D
Sbjct: 110 LEGHSEAVISVAFSPTGKYLASGSGDTTVRFWDLSTETPHFTCKGHRHWVLSISWSP-DG 168
Query: 166 SILSSGSYDGLIRIFDTESGHCL-KTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLD 224
L+SG +G I ++D +G + +TL WI P+ + +++ S D
Sbjct: 169 KKLASGCKNGQILLWDPSTGKQVGRTLAGHSKWITGLSWEPLHA---NPECRYVASSSKD 225
Query: 225 NVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNV 284
V++W+ T G R L H ++ L++ G D L+ S + ++ VW
Sbjct: 226 GSVRIWDTTAGRCER-ILTGHTQSVTCLRW----------GGDGLLYSASQDRTIKVWRA 274
Query: 285 YSKNLVQKIDEKHRNSPLISISASY 309
+ L + + +++S Y
Sbjct: 275 HDGVLCRTLQGHGHWVNTMALSTDY 299
>Hs17434629 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase complex and RNA
cleavage factor II complex subunit SWD2
Length = 315
Score = 59.7 bits (143), Expect = 6e-09
Identities = 61/265 (23%), Positives = 118/265 (44%), Gaps = 17/265 (6%)
Query: 37 SPDGELIAICQNTDMLV-YEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSE--DFTV 93
SP+G+ + N D +V Y+ K + + K ++ + ++ ++ S D T+
Sbjct: 30 SPNGQTVISSSNDDSIVLYDCQEGKPKRTLYSKKYGVDLIRYTHEANTAVYSSNKIDDTI 89
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+ + IR GH+ V+++ + +I S S+D++I+ W + + MS
Sbjct: 90 RYLSLHDNKYIRYFPGHSKRVVALSMSPVDDIFISGSLDKTIRLWDLRAPNCQGLMSLQG 149
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFS 212
V S D + IL++G +++++D S T+ + + +KFS
Sbjct: 150 KPVCSFDP---EGLILAAGVNSEMVKLYDLRSFDKGPFTTFRMQC---NRTCEWTGLKFS 203
Query: 213 RNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVIS 272
+GK +L+ + + + L + +G V+ TF E A K LE + ++I
Sbjct: 204 NDGKVILISTNGSFISLIDAFKGVVMHTF-----EGYANSK-AVTLEASFTPDSQFIMI- 256
Query: 273 GNDSGSMCVWNVYSKNLVQKIDEKH 297
G++ G + VWN S V +D KH
Sbjct: 257 GSEDGKIHVWNGESGIKVAVLDGKH 281
>7300980 [R] KOG4155 FOG: WD40 repeat
Length = 743
Score = 59.7 bits (143), Expect = 6e-09
Identities = 49/198 (24%), Positives = 87/198 (43%), Gaps = 33/198 (16%)
Query: 52 LVYEISSSKMMK-----------LTTTHKECINCLCWSPDSKCIASGSED-----FTVEI 95
L+Y +S M+ + +H I CL SP + + +GS+D +++E
Sbjct: 511 LMYSVSKDATMRCWRAHNLHCAAIYRSHNYPIWCLDESPVGQYVVTGSKDLSARLWSLEK 570
Query: 96 TH--IIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSD 153
H IIY GHT V + ++ GN + + S D S++ W SG ++ +
Sbjct: 571 EHALIIYA------GHTQDVECVAFHPNGNYIATGSADHSVRLWCATSGKLMRVFADCRQ 624
Query: 154 AVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSR 213
AV + D +L++ + +RIFD +G L L +D IS++ +S
Sbjct: 625 AVTQLAFSP-DGKMLAAAGEETKVRIFDLAAGAQLAEL--------KDHSASISSLSWST 675
Query: 214 NGKFLLVKSLDNVVKLWE 231
+ + L D ++LW+
Sbjct: 676 HNRHLATACSDGTLRLWD 693
>SPBC244.03 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 796
Score = 59.3 bits (142), Expect = 7e-09
Identities = 57/278 (20%), Positives = 120/278 (42%), Gaps = 20/278 (7%)
Query: 17 LQFDKQVLPASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLC 76
L F +++L + ++ + +IA N + ++ ++ +++ + I
Sbjct: 4 LDFQRKLLSHTERVKAVDFHPTEPWVIASHYNGQVGIWNYNTQTLVRSFDINDVPIRACA 63
Query: 77 WSPDSKCIASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNILCSSSMDESIK 135
+ GS+DF V + + G ++ + H + ++ + L +SS D +IK
Sbjct: 64 FIARKNWFVCGSDDFQVRVYNYNTGEKVTQFEAHPDYIRALVVHPTQPFLLTSSDDMTIK 123
Query: 136 --EWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTY 193
W +S ++T HS V+S+ I D++ +S DG ++++ S TL
Sbjct: 124 CFNWD-MSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDGTVKVWSFGSSVANFTLQ- 181
Query: 194 DKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLK 253
A D V + + +L+ DN++K+W+Y VR L H
Sbjct: 182 -----AHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTKACVR-ILEGHTNN----- 230
Query: 254 YNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQ 291
+ + K P++ISG++ G++ +W+ S +L++
Sbjct: 231 ----VSFAFFHSKFPIIISGSEDGTVKIWHTLSYSLIK 264
>Hs4758032 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 906
Score = 59.3 bits (142), Expect = 7e-09
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 12/182 (6%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI--THIIYGRIRRLMGHT 110
V+ ++ + + + H + I C+ P I + S+D +++ + + GHT
Sbjct: 83 VFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDKKWSCSQVFEGHT 142
Query: 111 APVISICYNNK-GNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID-IPKFDSSIL 168
V+ I N K N S+S+D +IK W + S + T+ H V ID D L
Sbjct: 143 HYVMQIVINPKDNNQFASASLDRTIKVWQLGSSSPNFTLEGHEKGVNCIDYYSGGDKPYL 202
Query: 169 SSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
SG+ D L++I+D ++ C++TL E +S F ++ S D V+
Sbjct: 203 ISGADDRLVKIWDYQNKTCVQTL--------EGHAQNVSCASFHPELPIIITGSEDGTVR 254
Query: 229 LW 230
+W
Sbjct: 255 IW 256
>At4g29830 [R] KOG4155 FOG: WD40 repeat
Length = 321
Score = 59.3 bits (142), Expect = 7e-09
Identities = 41/138 (29%), Positives = 75/138 (53%), Gaps = 7/138 (5%)
Query: 26 ASGKISTSCQISPDGELIAICQNTD--MLVYEISSSKMMKLTTTHKECINCLCWSP-DSK 82
+S K S SP+G+ +A C + D + V+++ SK++ H + L +SP D +
Sbjct: 156 SSKKFVLSVAWSPNGKRLA-CGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPR 214
Query: 83 CIASGSEDFTVEITHIIYGR--IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVL 140
+ SGS+D V + H G+ + + GHT+ V+S+ + G + + S D +++ W +
Sbjct: 215 VLFSGSDDGHVNM-HDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK 273
Query: 141 SGTALKTMSAHSDAVVSI 158
A++TMS H+D V S+
Sbjct: 274 MRAAIQTMSNHNDQVWSV 291
>7302603 [R] KOG0289 mRNA splicing factor
Length = 505
Score = 59.3 bits (142), Expect = 7e-09
Identities = 54/226 (23%), Positives = 102/226 (44%), Gaps = 21/226 (9%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMG-HTA 111
V+ + +M+ + H + I + + P+ + +GS D + I H+ + + L+ H
Sbjct: 249 VFNKDTEQMVAILKGHTKKITKVIYHPNEDTVITGSPDMNIRIWHVPTSQTQLLLRCHEG 308
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF--DSSILS 169
PV + + G+ L S+S D+ + +G L + A V + +F D I
Sbjct: 309 PVTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKVI--DTAEVGLTTAQFHPDGLIFG 366
Query: 170 SGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKL 229
+G+ D ++I+D LK + ++ G PIS + FS NG +L + D VKL
Sbjct: 367 TGTVDSQVKIWD------LKEQSNVANFPGHTG--PISAISFSENGYYLATAADDACVKL 418
Query: 230 WEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGND 275
W+ + ++ F + ++K +L + Q L I+G+D
Sbjct: 419 WDLRK---LKNFKTIQLDDGYEVK-----DLCFDQSGTYLAIAGSD 456
>7302600 [R] KOG4155 FOG: WD40 repeat
Length = 1240
Score = 59.3 bits (142), Expect = 7e-09
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 5/132 (3%)
Query: 63 KLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRR-LMGHTAPV--ISICYN 119
K + +H + I C S DS I SGS D ++++ G++ + L+GH+ V +++
Sbjct: 900 KYSVSHSDEITCFEISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHSDAVTCVAVSVT 959
Query: 120 NKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRI 179
NK +L S S D ++ W +L+G + T++ H V+ + + D S SGS D + +
Sbjct: 960 NKTQVL-SGSKDMNLILWDLLTGEEVHTLAGHLGPVIGVKV-SADGSTAVSGSDDKTLIV 1017
Query: 180 FDTESGHCLKTL 191
++T+ G L +L
Sbjct: 1018 WETKRGLALTSL 1029
Score = 56.6 bits (135), Expect = 5e-08
Identities = 46/205 (22%), Positives = 94/205 (45%), Gaps = 14/205 (6%)
Query: 32 TSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDF 91
T +S D + +AI + + I++ + H ++CL ++P+ + +A+GSED
Sbjct: 747 TCFDLSRDSQQMAIASGRHVHLMRINTPEYQCTLEGHTAGVSCLKFAPNGEFLATGSEDR 806
Query: 92 TVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSA 150
V I ++ G I GHTAPV+ + + S+ D + W SG L+T+
Sbjct: 807 LVHIWNLALGEICNSFKGHTAPVVKVVVLMDSLRVISTDRDSMLLVWMAHSGNLLQTIQG 866
Query: 151 HSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVK 210
++ + +F ++ ++G D ++I+ +LT + + + I+ +
Sbjct: 867 PYKSLSVTNNMRF--AVSTNG--DNTLKIW---------SLTQEDEKYSVSHSDEITCFE 913
Query: 211 FSRNGKFLLVKSLDNVVKLWEYTRG 235
S + ++ S D +K+W+ T G
Sbjct: 914 ISADSVHIISGSRDMSLKVWQATGG 938
Score = 56.6 bits (135), Expect = 5e-08
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 14/203 (6%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSP--DSKCIASGSEDFTVEITHII 99
LI + D+ + I S+ + + H + CL +P DS+ + +GSED TV + H+
Sbjct: 442 LILATSSGDVQQWHIMSNSLDHIFKGHTAAVTCLLVAPQSDSELLLTGSEDATVLVWHVG 501
Query: 100 YGRIRRLM--GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVS 157
R + HTAP+ + ++ SSS D SI + SG ++ H V
Sbjct: 502 LRERRAHIKNAHTAPITGVAAGANNTLIISSSEDASIAITDLASGKLRHRITHHRGPVSG 561
Query: 158 IDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKF 217
I + +L SG D I ++D ++ L T+ + + S N F
Sbjct: 562 I-VVAGACDVLISGGLDRTICVWDLDNFTLLNTMQMTS---------AVLRIDISWNSVF 611
Query: 218 LLVKSLDNVVKLWEYTRGTVVRT 240
LL DN + + G + T
Sbjct: 612 LLALCEDNALYVRTLATGKELHT 634
Score = 52.8 bits (125), Expect = 7e-07
Identities = 31/123 (25%), Positives = 62/123 (50%), Gaps = 3/123 (2%)
Query: 32 TSCQISPDG-ELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKC-IASGSE 89
T +IS D +I+ ++ + V++ + K+ ++ H + + C+ S +K + SGS+
Sbjct: 910 TCFEISADSVHIISGSRDMSLKVWQATGGKLSQVLVGHSDAVTCVAVSVTNKTQVLSGSK 969
Query: 90 DFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM 148
D + + ++ G + L GH PVI + + G+ S S D+++ W G AL ++
Sbjct: 970 DMNLILWDLLTGEEVHTLAGHLGPVIGVKVSADGSTAVSGSDDKTLIVWETKRGLALTSL 1029
Query: 149 SAH 151
H
Sbjct: 1030 QMH 1032
>Hs7108333_2 [R] KOG4155 FOG: WD40 repeat
Length = 668
Score = 59.3 bits (142), Expect = 7e-09
Identities = 39/171 (22%), Positives = 80/171 (45%), Gaps = 16/171 (9%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNILC 126
H + + C+S D + IAS D T+++ G ++ + H V+ ++ +
Sbjct: 34 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 93
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSS----ILSSGSYDGLIRIFDT 182
+ S+D+ +K W+ ++G + T HS+ ++ F +S +L++GS D ++++D
Sbjct: 94 TCSVDKKVKIWNSMTGELVHTYDEHSE---QVNCCHFTNSSHHLLLATGSSDCFLKLWDL 150
Query: 183 ESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYT 233
C T+ + ++ +FS + K L S D +KLW+ T
Sbjct: 151 NQKECRNTMFGHTN--------SVNHCRFSPDDKLLASCSADGTLKLWDAT 193
Score = 57.4 bits (137), Expect = 3e-08
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 72 INCLCWSPDSKCIASGSEDFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSM 130
++C C SP + IA G E+ +EI ++ RI + H V I + L SSS
Sbjct: 384 VSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSD 443
Query: 131 DESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKT 190
D I+ W+ + + H + V + K +S L S S+DG +++++ +G+
Sbjct: 444 DAEIQVWNWQLDKCI-FLRGHQETVKDFRLLK--NSRLLSWSFDGTVKVWNIITGN---- 496
Query: 191 LTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKA 250
+KD++ G V + S + S D K+W + L P E +
Sbjct: 497 --KEKDFVCHQGTV--LSCDISHDATKFSSTSADKTAKIWSF-------DLLLPLHELRG 545
Query: 251 KLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLV 290
+N + L+ +G+D+G + +WNV + L+
Sbjct: 546 ---HNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELL 582
Score = 54.3 bits (129), Expect = 2e-07
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 53/254 (20%)
Query: 34 CQISPDGELIAIC-QNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFT 92
C +SP + IA +N + + E+ ++++ + HK+ + + ++ D K + S S+D
Sbjct: 387 CCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAE 446
Query: 93 VEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+++ + + L GH V K + L S S D ++K W++++G K H
Sbjct: 447 IQVWNWQLDKCIFLRGHQETVKDFRL-LKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQ 505
Query: 153 DAVVSIDI----PKF-------------------------------------DSSILSSG 171
V+S DI KF DS++L++G
Sbjct: 506 GTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATG 565
Query: 172 SYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP----ISTVKFSRNGKFLLVKSLDNVV 227
+G IRI++ +G L ++E+G ++ + FS +GK L+ S +
Sbjct: 566 DDNGEIRIWNVSNGELLHLCAP----LSEEGAATHGGWVTDLCFSPDGKMLI--SAGGYI 619
Query: 228 KLWEYTRGTVVRTF 241
K W G +TF
Sbjct: 620 KWWNVVTGESSQTF 633
>Hs4502123_2 [R] KOG4155 FOG: WD40 repeat
Length = 625
Score = 59.3 bits (142), Expect = 7e-09
Identities = 39/171 (22%), Positives = 80/171 (45%), Gaps = 16/171 (9%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNILC 126
H + + C+S D + IAS D T+++ G ++ + H V+ ++ +
Sbjct: 34 HTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEVLCCAFSTDDRFIA 93
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSS----ILSSGSYDGLIRIFDT 182
+ S+D+ +K W+ ++G + T HS+ ++ F +S +L++GS D ++++D
Sbjct: 94 TCSVDKKVKIWNSMTGELVHTYDEHSE---QVNCCHFTNSSHHLLLATGSSDCFLKLWDL 150
Query: 183 ESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYT 233
C T+ + ++ +FS + K L S D +KLW+ T
Sbjct: 151 NQKECRNTMFGHTN--------SVNHCRFSPDDKLLASCSADGTLKLWDAT 193
Score = 57.4 bits (137), Expect = 3e-08
Identities = 53/220 (24%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 72 INCLCWSPDSKCIASGSEDFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILCSSSM 130
++C C SP + IA G E+ +EI ++ RI + H V I + L SSS
Sbjct: 341 VSCCCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSD 400
Query: 131 DESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKT 190
D I+ W+ + + H + V + K +S L S S+DG +++++ +G+
Sbjct: 401 DAEIQVWNWQLDKCI-FLRGHQETVKDFRLLK--NSRLLSWSFDGTVKVWNIITGN---- 453
Query: 191 LTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKA 250
+KD++ G V + S + S D K+W + L P E +
Sbjct: 454 --KEKDFVCHQGTV--LSCDISHDATKFSSTSADKTAKIWSF-------DLLLPLHELRG 502
Query: 251 KLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLV 290
+N + L+ +G+D+G + +WNV + L+
Sbjct: 503 ---HNGCVRCSAFSVDSTLLATGDDNGEIRIWNVSNGELL 539
Score = 54.3 bits (129), Expect = 2e-07
Identities = 57/254 (22%), Positives = 106/254 (41%), Gaps = 53/254 (20%)
Query: 34 CQISPDGELIAIC-QNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFT 92
C +SP + IA +N + + E+ ++++ + HK+ + + ++ D K + S S+D
Sbjct: 344 CCLSPHLQYIAFGDENGAIEILELVNNRIFQSRFQHKKTVWHIQFTADEKTLISSSDDAE 403
Query: 93 VEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+++ + + L GH V K + L S S D ++K W++++G K H
Sbjct: 404 IQVWNWQLDKCIFLRGHQETVKDFRL-LKNSRLLSWSFDGTVKVWNIITGNKEKDFVCHQ 462
Query: 153 DAVVSIDI----PKF-------------------------------------DSSILSSG 171
V+S DI KF DS++L++G
Sbjct: 463 GTVLSCDISHDATKFSSTSADKTAKIWSFDLLLPLHELRGHNGCVRCSAFSVDSTLLATG 522
Query: 172 SYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP----ISTVKFSRNGKFLLVKSLDNVV 227
+G IRI++ +G L ++E+G ++ + FS +GK L+ S +
Sbjct: 523 DDNGEIRIWNVSNGELLHLCAP----LSEEGAATHGGWVTDLCFSPDGKMLI--SAGGYI 576
Query: 228 KLWEYTRGTVVRTF 241
K W G +TF
Sbjct: 577 KWWNVVTGESSQTF 590
Score = 51.6 bits (122), Expect = 2e-06
Identities = 49/207 (23%), Positives = 89/207 (42%), Gaps = 11/207 (5%)
Query: 34 CQISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSK--CIASGSED 90
C S D IA C + + ++ + +++ H E +NC ++ S +A+GS D
Sbjct: 83 CAFSTDDRFIATCSVDKKVKIWNSMTGELVHTYDEHSEQVNCCHFTNSSHHLLLATGSSD 142
Query: 91 FTVEITHIIYGRIRRLM-GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMS 149
+++ + R M GHT V ++ +L S S D ++K W S K+++
Sbjct: 143 CFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDATSANERKSIN 202
Query: 150 AHSDAVVSIDIPKFDSSIL---SSGSYDGLIRIFDTESGHCLKTLTYDKDWIAE--DGVV 204
++++ P+ D ++ S S DG RI T + +A+ +
Sbjct: 203 V-KQFFLNLEDPQEDMEVIVKCCSWSADG-ARIMVAAKNKIFLWNTDSRSKVADCRGHLS 260
Query: 205 PISTVKFSRNGKFLLVKSLDNVVKLWE 231
+ V FS +G L S D ++LWE
Sbjct: 261 WVHGVMFSPDGSSFLTSSDDQTIRLWE 287
>Hs4504053 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 58.9 bits (141), Expect = 1e-08
Identities = 52/215 (24%), Positives = 93/215 (43%), Gaps = 16/215 (7%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDML--VYEISSS----KMMKLTTTHKECINCLCW 77
+P +C +P G +A C D + +Y + S K+ + + H ++C C
Sbjct: 93 IPLRSSWVMTCAYAPSGNFVA-CGGLDNMCSIYNLKSREGNVKVSRELSAHTGYLSC-CR 150
Query: 78 SPDSKCIASGSEDFTVEITHIIYGRIRRL-MGHTAPVISICYNNKGNILCSSSMDESIKE 136
D I + S D T + I G+ + + +GHT +S+ + N+ S + D S K
Sbjct: 151 FLDDNNIVTSSGDTTCALWDIETGQQKTVFVGHTGDCMSLAVSPDFNLFISGACDASAKL 210
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
W V GT +T + H + +I + + +GS D R+FD + L ++
Sbjct: 211 WDVREGTCRQTFTGHESDINAICFFP-NGEAICTGSDDASCRLFDLRADQELICFSH--- 266
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
E + I++V FS +G+ L D +W+
Sbjct: 267 ---ESIICGITSVAFSLSGRLLFAGYDDFNCNVWD 298
>Hs22047819 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 880
Score = 58.9 bits (141), Expect = 1e-08
Identities = 55/229 (24%), Positives = 92/229 (40%), Gaps = 25/229 (10%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWS-----PDSKC---------IASGSEDFTVEITHI 98
V+ + +M + H+ C+ L +S P + C + +GS D T ++ +
Sbjct: 312 VWSVDKGQMSREFRGHRNCVLTLAYSAPWDLPSTPCAEEAAAGGLLVTGSTDGTAKVWQV 371
Query: 99 IYGRIRR-LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVS 157
G + L GHT V+ + + G+ + S D +I+ W +LSG L+ H +V+
Sbjct: 372 ASGCCHQTLRGHTGAVLCLVLDTPGHTAFTGSTDATIRAWDILSGEQLRVFREHRGSVIC 431
Query: 158 IDI-PKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPIST--VKFSRN 214
+++ G +G + LK W + V +T K S +
Sbjct: 432 LELGSTLPCPERLKGLAEGRQHTLLQKEQLALKAAKRLMVWGSAQVVTKGATGRAKHSAH 491
Query: 215 GKFLLVK------SLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCG 257
+LV S D VK W G VRTF H+ + LKY+ G
Sbjct: 492 RPCVLVNRLVYSGSADRTVKCWLADTGECVRTFT-AHRRNVSALKYHAG 539
>CE02005 [R] KOG0288 WD40 repeat protein TipD
Length = 464
Score = 58.9 bits (141), Expect = 1e-08
Identities = 63/293 (21%), Positives = 121/293 (40%), Gaps = 48/293 (16%)
Query: 50 DMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHII-----YGRIR 104
+ ++ ++ S++ +TH ++ + W D +GS D V+I + ++
Sbjct: 156 EFMMTDVLPSEVKFKLSTHDGEVHDVEWMSDDTFATAGS-DSKVQIWRVSPNKTDASKVS 214
Query: 105 RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFD 164
L G PV + Y+++ ++ +SS D++ + W++ S L T S H+D V S + F
Sbjct: 215 TLSGCLGPVNRLDYDSQRHVCLASSNDKTCRLWNIDSQRLLSTFSGHTDKVSSARL--FQ 272
Query: 165 SSILSSGSYDGLIRIFDTESGHCLKTLTYDK---DWIAEDGV------------------ 203
S + SGS D I+ +D S CLK+ D +A+ GV
Sbjct: 273 SHNVISGSADRTIKNWDISSIRCLKSYLVGSTVFDIVAKCGVSQSSFISSHFDKKVRFWD 332
Query: 204 -------------VPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKA 250
+S++ S +G +L S D+ + L + VR + H +
Sbjct: 333 ARSSDATYSVELGQKVSSLDISMDGLQVLASSRDDTLSLID------VRNYGIIHLYSAE 386
Query: 251 KLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLI 303
+ K +C V++G+ + S+ +WN + L + + +S I
Sbjct: 387 QYKTSCDSTRAIFSSTGEYVLAGSSNSSVFIWNTKTTKLEKVVKTARSDSAQI 439
>At2g26060 [R] KOG0645 WD40 repeat protein
Length = 323
Score = 58.9 bits (141), Expect = 1e-08
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 42 LIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIY 100
++A C + + ++E SS TH + WSP + +A+ S D T I Y
Sbjct: 38 ILASCSGDNTVRIWEQSSLSRSWTCKTHTRTVRSCAWSPSGQLLATASFDGTTGIWKN-Y 96
Query: 101 GR----IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT---ALKTMSAHSD 153
G I L GH V S+ +N G+ L + S D+S+ W VL G ++ H+
Sbjct: 97 GSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQ 156
Query: 154 AVVSID-IPKFDSSILSSGSYDGLIRIFDTESG----HCLKTLTYDKDWIAEDGVVPIST 208
V + P D +L S SYD I+++ +E C++TL + + + +
Sbjct: 157 DVKMVQWHPTMD--VLFSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSS----TVWS 210
Query: 209 VKFSRNGKFLLVKSLDNVVKLW 230
+ F+ G ++ S D +K+W
Sbjct: 211 ISFNAAGDKMVTCSDDLTLKIW 232
>At2g46290 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 58.5 bits (140), Expect = 1e-08
Identities = 60/232 (25%), Positives = 98/232 (41%), Gaps = 40/232 (17%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
+ GH P+ + YN G++L S + D + W +G L T HS AV DI + DS
Sbjct: 6 MKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCCDISR-DS 64
Query: 166 SILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDN 225
S L +GS D +++D +SG L T + P +V FS G L V + D+
Sbjct: 65 SRLITGSADQTAKLWDVKSGKELFTFKFG---------APARSVDFS-VGDHLAVITTDH 114
Query: 226 VVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL-----------VISGN 274
V GT + E + L L P GK + ++SG
Sbjct: 115 FV-------GTSSAIHVKRIAEDPEDQVGDSVLVLQSPDGKKKINRAVWGPLNQTIVSGG 167
Query: 275 DSGSMCVWNVYSKNLVQKIDEKHRNSPLIS-----------ISASYDKVATL 315
+ ++ +W+ + L+++ DE+ + I+ ++ S+DK A L
Sbjct: 168 EDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKL 219
>7291678 [R] KOG0641 WD40 repeat protein
Length = 348
Score = 58.5 bits (140), Expect = 1e-08
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 17/199 (8%)
Query: 59 SKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI------THIIYGRIRRLMGHTAP 112
S + K T H+ I C CWS D + IA+GS D T++ T+ + G L H
Sbjct: 76 SVLCKRTKHHRGSIYCTCWSRDGELIATGSNDKTIKYMRFNNDTNQLVGHEMELNMHDGT 135
Query: 113 VISICY----NNKGNILCSSSM-DESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSI 167
V +C+ + K +L S D I +GT + S H+ ++S + +++++
Sbjct: 136 VRDMCFLDDSSTKSRLLASGGAGDCKIYITDCGTGTPFQAYSGHTGHILS--LYSWNNAM 193
Query: 168 LSSGSYDGLIRIFDTESGHCLKTLTYD-KDWIAEDGVVPISTVKFSRNGKFLLVKSLDNV 226
SGS D IR +D + TL D KD E V + V G+ L+ D+
Sbjct: 194 FVSGSQDQTIRFWDLRVNVSVNTLDNDRKDGGLESSAV--TAVCVDPTGRLLVSGHADSS 251
Query: 227 VKLWEYTRGTVVRTFLWPH 245
L++ ++ F +PH
Sbjct: 252 CTLYDIRGNRPIQRF-YPH 269
>Hs4758558 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 522
Score = 58.2 bits (139), Expect = 2e-08
Identities = 50/231 (21%), Positives = 96/231 (40%), Gaps = 20/231 (8%)
Query: 34 CQISPDGELIAI-CQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKC--------I 84
C SP+ +++A C + ++ + ++ H + + + P S +
Sbjct: 237 CHFSPNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNL 296
Query: 85 ASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT 143
AS + D +V++ + + + GHT V + ++ G L ++ D S + W + +
Sbjct: 297 ASCAADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQE 356
Query: 144 ALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGV 203
+ HS V I + D S+ +G D R++D +G C+ L E +
Sbjct: 357 EILHQEGHSMGVYDIAFHQ-DGSLAGTGGLDAFGRVWDLRTGRCIMFL--------EGHL 407
Query: 204 VPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKY 254
I + FS NG + S DN K+W+ + V T + HQ +K+
Sbjct: 408 KEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYT-IPAHQNLVTGVKF 457
Score = 50.4 bits (119), Expect = 3e-06
Identities = 40/195 (20%), Positives = 77/195 (38%), Gaps = 10/195 (5%)
Query: 38 PDGELIAI-CQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEIT 96
P G + C + ++++ + + + H + + + D +G D +
Sbjct: 333 PSGRFLGTTCYDRSWRLWDLEAQEEILHQEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVW 392
Query: 97 HIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
+ GR I L GH + I ++ G + + S D + K W + + T+ AH + V
Sbjct: 393 DLRTGRCIMFLEGHLKEIYGINFSPNGYHIATGSGDNTCKVWDLRQRRCVYTIPAHQNLV 452
Query: 156 VSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNG 215
+ + L +G+YD +I+ LKTL +G + + S +G
Sbjct: 453 TGVKFEPIHGNFLLTGAYDNTAKIWTHPGWSPLKTLA------GHEG--KVMGLDISSDG 504
Query: 216 KFLLVKSLDNVVKLW 230
+ + S D KLW
Sbjct: 505 QLIATCSYDRTFKLW 519
>7301704 [R] KOG4155 FOG: WD40 repeat
Length = 621
Score = 58.2 bits (139), Expect = 2e-08
Identities = 47/161 (29%), Positives = 85/161 (52%), Gaps = 10/161 (6%)
Query: 35 QISPDGELI-AICQNTDMLVYE-ISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFT 92
+ + DG ++ A + +LV++ I+ ++ K+ H + +NC+ + D + A+GS+DFT
Sbjct: 55 EFNADGNVVVAATERKCVLVFDAITQKEIFKVPDAHTDSVNCIKFF-DERLFATGSDDFT 113
Query: 93 VEITHI--IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSA 150
V + + + ++R L GH+ V +I Y++K +L SS D SI W + S T +S
Sbjct: 114 VALWDLRNMKQKLRVLHGHSNWVKNIEYSSKDKLLVSSGFDGSIFTWDINSQTEQGLISQ 173
Query: 151 ---HSDAVVSIDI-PKFDSSIL-SSGSYDGLIRIFDTESGH 186
H+ ++ I P D +L +SG Y +I D + H
Sbjct: 174 RVFHASGLMRCRISPTGDKLVLCTSGGYIMIIHHLDLTTLH 214
>SPBC6B1.10 [S] KOG0282 mRNA splicing factor
Length = 558
Score = 57.8 bits (138), Expect = 2e-08
Identities = 75/299 (25%), Positives = 124/299 (41%), Gaps = 63/299 (21%)
Query: 68 HKECINCLCWSPDS-KCIASGSEDFTVEITHIIYGR--IRRLMGHTAPVISICYNNKGNI 124
H + I+CL + P S + SGS D ++I + + R +R GH P+ + ++ G
Sbjct: 265 HTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRS 324
Query: 125 LCSSSMDESIKEWHVLSGTALKTM-SAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTE 183
S+S D++IK W G L S V + + +G+ D I FD
Sbjct: 325 FLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIR 384
Query: 184 SGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV----- 238
S ++ YD + I+++ F NGK + S D+ ++ WEY GT V
Sbjct: 385 SPDIVQ--AYDHH------LGGINSITFLENGKRFVTTSDDSSMRFWEY--GTPVPIKFV 434
Query: 239 ---------RTFLWP----------------------HQETKAKL--KYNC---GLELIY 262
R L P +++ K K+ Y+C LE+ +
Sbjct: 435 ADIAMHSMPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGF 494
Query: 263 -PQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISIS---ASYDKVATLSL 317
P G+ V SG+ SG+ C W+ + L+ K+ + P+ S++ KVAT S+
Sbjct: 495 SPDGR--FVFSGDSSGNACFWDWKTCKLMAKLPA--HSGPVQSMAFHPQETSKVATSSI 549
>SPBC21B10.05c [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 314
Score = 57.8 bits (138), Expect = 2e-08
Identities = 56/265 (21%), Positives = 104/265 (39%), Gaps = 45/265 (16%)
Query: 26 ASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTT--HKECINCLCWSPDSKC 83
A +++ C ISPD + +A N + +Y+I++S M L T H + + + D K
Sbjct: 39 ADSQVNRLC-ISPDKKFLAAAGNPHVRLYDINTSSQMPLMTFEGHTNNVTAIAFHCDGKW 97
Query: 84 IASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT 143
+A+ SED TV++ + ++R H +PV + + L S ++ W + +
Sbjct: 98 LATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLLIHPNQGELLSCDQSGRVRAWDLGENS 157
Query: 144 ALKTMSAHSDAVVSIDIPKFDSSILSSGSYDG---LIRIFDTESGHCLKTL--------- 191
+ D +S D S+L +G+ G + R+ + + L+ +
Sbjct: 158 CTHELIPEEDVPMSSITVGSDGSMLIAGNNKGNCYVWRMLNHQGASLLQPVVKFQAHQRY 217
Query: 192 --------------TYDKD-----WIAEDGVVPIS-----------TVKFSRNGKFLLVK 221
T D W ED + FS + +L+
Sbjct: 218 ITRCVLSPDVKHLATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDCAFSADSTYLVTA 277
Query: 222 SLDNVVKLWEYTRGTVVRTFLWPHQ 246
S D+V +LWE + G +R + H+
Sbjct: 278 SSDHVARLWELSSGETIRQYSGHHK 302
Score = 50.4 bits (119), Expect = 3e-06
Identities = 49/206 (23%), Positives = 97/206 (46%), Gaps = 24/206 (11%)
Query: 124 ILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTE 183
+L SS D +I+ W LSG +T+ H+D+ V+ D L++ + +R++D
Sbjct: 12 LLVSSGYDHTIRFWEALSGICSRTIQ-HADSQVNRLCISPDKKFLAAAG-NPHVRLYDIN 69
Query: 184 SGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLW 243
+ + +T+ E ++ + F +GK+L S D VK+W+ +V R +
Sbjct: 70 TSSQMPLMTF------EGHTNNVTAIAFHCDGKWLATSSEDGTVKVWDMRAPSVQRNY-- 121
Query: 244 PHQETKAKLKYNCGLELIYP-QGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPL 302
H+ L LI+P QG+ ++S + SG + W++ + ++ + + P+
Sbjct: 122 DHKSPVNDL-------LIHPNQGE---LLSCDQSGRVRAWDLGENSCTHELIPE-EDVPM 170
Query: 303 ISISASYDKVATLSLN--GECNLFRV 326
SI+ D ++ N G C ++R+
Sbjct: 171 SSITVGSDGSMLIAGNNKGNCYVWRM 196
>At1g71840 [S] KOG0296 Angio-associated migratory cell protein (contains WD40
repeats)
Length = 390
Score = 57.8 bits (138), Expect = 2e-08
Identities = 66/303 (21%), Positives = 127/303 (41%), Gaps = 33/303 (10%)
Query: 29 KISTSC-QISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCIAS 86
K S SC S DG+L+A ++ +++ SS + + I + W P + +
Sbjct: 104 KDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRWHPRGHIVLA 163
Query: 87 GSEDFTVEITHIIY-GRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTAL 145
GSED ++ + + + GH V + G ++C+ S D S+ W+
Sbjct: 164 GSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNP------ 217
Query: 146 KTMSA-HSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVV 204
KT H++ + +DI +SS+ SGS DG + I + +G + +L D
Sbjct: 218 KTCHPYHTEGLTCLDINS-NSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTD-------- 268
Query: 205 PISTVKFSRNGKFLLVKS---LDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELI 261
+ VKFS + + + + +D + +W+ T F+ H+E L +
Sbjct: 269 SVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTP--RFICEHEEGVTSLTWI------ 320
Query: 262 YPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGEC 321
G + +G +G++ +W+ N V IS+S + D + ++S++
Sbjct: 321 ---GTSKYLATGCANGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVDNTA 377
Query: 322 NLF 324
+F
Sbjct: 378 RVF 380
Score = 52.4 bits (124), Expect = 9e-07
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 20/182 (10%)
Query: 103 IRRLMGHTAPVISI-CYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIP 161
+ GH + ++ C ++ + D+ W + +G + H D+V +
Sbjct: 54 VHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKIGNGDWAAELPGHKDSVSCLAF- 112
Query: 162 KFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVK 221
+D +L+SG DG+++IFD SG LK + + I V++ G +L
Sbjct: 113 SYDGQLLASGGLDGVVQIFDASSG-TLKC-------VLDGPGAGIEWVRWHPRGHIVLAG 164
Query: 222 SLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCV 281
S D + +W + + F + L CG P GK L+ +G+D S+ V
Sbjct: 165 SEDCSLWMWNADKEAYLNMF------SGHNLNVTCG--DFTPDGK--LICTGSDDASLIV 214
Query: 282 WN 283
WN
Sbjct: 215 WN 216
>SPBC32F12.02 [R] KOG4155 FOG: WD40 repeat
Length = 302
Score = 57.4 bits (137), Expect = 3e-08
Identities = 43/162 (26%), Positives = 81/162 (49%), Gaps = 6/162 (3%)
Query: 32 TSCQISPDGELIAICQNTDMLVY--EISSSKMMKLTTTHKECINCLCWSPDSKCIASGSE 89
+SC ISPDG+ IA + S K+ +L T K + C+ +SP+ + I SG +
Sbjct: 108 SSC-ISPDGQTIAFTSVDGRIAVWDNPSDCKISELDTKGKFGL-CIDYSPNGRFIVSGHQ 165
Query: 90 DFTVEITHIIYGRIRRLM-GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM 148
+ + GR+ ++ GHT+PV S+ ++ +L ++ + I + VLSG + +
Sbjct: 166 TGQLFLISTETGRLFHVLSGHTSPVRSVAFSPGSTLLAAAGDSKMITIYDVLSGDQVGQL 225
Query: 149 SAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKT 190
H+ + ++ +L S +G I+I+D ++ C+ T
Sbjct: 226 RGHAAWIFAVAFNPV-GDLLLSADVEGKIKIWDIDTMECIST 266
Score = 53.5 bits (127), Expect = 4e-07
Identities = 30/137 (21%), Positives = 64/137 (45%), Gaps = 2/137 (1%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSK 82
L GK SP+G I T L + + ++ + + H + + +SP S
Sbjct: 141 LDTKGKFGLCIDYSPNGRFIVSGHQTGQLFLISTETGRLFHVLSGHTSPVRSVAFSPGST 200
Query: 83 CIASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLS 141
+A+ + + I ++ G ++ +L GH A + ++ +N G++L S+ ++ IK W + +
Sbjct: 201 LLAAAGDSKMITIYDVLSGDQVGQLRGHAAWIFAVAFNPVGDLLLSADVEGKIKIWDIDT 260
Query: 142 GTALKTMSAHSDAVVSI 158
+ T S A+ ++
Sbjct: 261 MECISTQSETDGAIWAV 277
>Hs7657381 [R] KOG0289 mRNA splicing factor
Length = 504
Score = 57.4 bits (137), Expect = 3e-08
Identities = 53/229 (23%), Positives = 104/229 (45%), Gaps = 20/229 (8%)
Query: 50 DMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMG 108
+++V++ SS +++ H + + + + P + S S D T+ I + ++ +
Sbjct: 245 NVVVFDKSSEQILATLKGHTKKVTSVVFHPSQDLVFSASPDATIRIWSVPNASCVQVVRA 304
Query: 109 HTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF--DSS 166
H + V + + G+ L SSS D+ + +G L ++ + S+ +F D
Sbjct: 305 HESAVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDETSGC-SLTCAQFHPDGL 363
Query: 167 ILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNV 226
I +G+ D I+I+D LK T ++ G PI+++ FS NG +L + D+
Sbjct: 364 IFGTGTMDSQIKIWD------LKERTNVANFPGHSG--PITSIAFSENGYYLATAADDSS 415
Query: 227 VKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGND 275
VKLW+ + ++ F + ++K LI+ Q L + G D
Sbjct: 416 VKLWDLRK---LKNFKTLQLDNNFEVK-----SLIFDQSGTYLALGGTD 456
>Hs22052079 [R] KOG0266 WD40 repeat-containing protein
Length = 426
Score = 57.4 bits (137), Expect = 3e-08
Identities = 68/300 (22%), Positives = 126/300 (41%), Gaps = 48/300 (16%)
Query: 34 CQISPDGE-LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSE-DF 91
C I+ D +IA + + +++ + K++ ++C +SPD K + SG + D
Sbjct: 151 CSITGDSSRVIAASYDKTVRAWDLETGKLLWKVRYDTFIVSCK-FSPDGKYVVSGFDVDH 209
Query: 92 TV------EITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTAL 145
+ IT + + HT + S C++ + S S+D IK W V S L
Sbjct: 210 GICIMDAENITTVSVIKDH----HTRSITSCCFDPDSQRVASVSLDRCIKIWDVTSQATL 265
Query: 146 KTMS-AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESG---HCLKTLTYDKDWIAED 201
T++ AHS+A+ + F L + S+D ++I++ +G +C +T + +
Sbjct: 266 LTITKAHSNAISNCCF-TFSGHFLCTSSWDKNLKIWNVHTGEFRNCGACVT-----LMQG 319
Query: 202 GVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLK-YNCGLEL 260
+S+ F+R+ FL+ D V +W+ G K LK +N +
Sbjct: 320 HEGSVSSCHFARDSSFLISGGFDRTVAIWDVAEG-----------YRKLSLKGHNDWVMD 368
Query: 261 IYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGE 320
+ ++S + +M +WN +++IDE I + Y K L L E
Sbjct: 369 VAISNNKKWILSASKDRTMRLWN------IEEIDE-------IPLVIKYKKAVGLKLKQE 415
>Hs11321585 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 57.4 bits (137), Expect = 3e-08
Identities = 51/215 (23%), Positives = 92/215 (42%), Gaps = 16/215 (7%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDML--VYEISSS----KMMKLTTTHKECINCLCW 77
+P +C +P G +A C D + +Y + + ++ + H ++C C
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVA-CGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSC-CR 150
Query: 78 SPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKE 136
D I + S D T + I G+ GHT V+S+ + S + D S K
Sbjct: 151 FLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKL 210
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
W V G +T + H + +I + + ++GS D R+FD + L T ++D
Sbjct: 211 WDVREGMCRQTFTGHESDINAICFFP-NGNAFATGSDDATCRLFDLRADQELMTYSHD-- 267
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
+ + I++V FS++G+ LL D +W+
Sbjct: 268 ----NIICGITSVSFSKSGRLLLAGYDDFNCNVWD 298
>CE04149 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase complex and RNA
cleavage factor II complex subunit SWD2
Length = 248
Score = 57.4 bits (137), Expect = 3e-08
Identities = 53/213 (24%), Positives = 90/213 (41%), Gaps = 20/213 (9%)
Query: 37 SPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEIT 96
S DG + + +LVY++ K K +NCL + KC+ SG D T+ +
Sbjct: 37 SDDGNNLIVSAEDVVLVYDLRDGSKGKSIECKKYGVNCLEYLDTVKCVHSGPNDTTIRLL 96
Query: 97 HI-IYGRIRRLMGHTAPVISICYNNKG-NILCSSSMDESIKEWHVLSGTALKTMSAHSDA 154
H+ +R GH PV I N K SSS+D I+ + + + A
Sbjct: 97 HLQKKSYVRYFDGHRMPVNFIRTNPKDREKFLSSSVDGEIRMFDTRTFENYGCLLAGHTP 156
Query: 155 VVSIDIPKFDSSILSSGSYDGLIRIFDTES------GHCLKTLTYDKDWIAEDGVVPIST 208
+++ D D + + + I++FD S + T T + +W S
Sbjct: 157 LIAFDP---DGILFAVATKSDTIKLFDMRSFDLGPFQSFIITKTDNDEW---------SD 204
Query: 209 VKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
++FS GKF+L+ + VK + GT++ +F
Sbjct: 205 IEFSPCGKFILISTTAGSVKWIDAFDGTLIHSF 237
>7301840 [R] KOG0288 WD40 repeat protein TipD
Length = 220
Score = 57.4 bits (137), Expect = 3e-08
Identities = 51/235 (21%), Positives = 104/235 (43%), Gaps = 23/235 (9%)
Query: 93 VEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+ +T + GR L GH+ V++ Y + + + S D ++K W + S ++T A S
Sbjct: 3 LSLTDKMLGRDHTLTGHSGKVMAAKYVQEPIKVVTGSHDRTLKIWDLRSIACIETKFAGS 62
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP--ISTVK 210
+ S+I+ SG YD IR +D + + A+D ++P I+++
Sbjct: 63 SCNDLVTTDSLGSTII-SGHYDKKIRFWDIRT-----------EKQADDVLMPAKITSLD 110
Query: 211 FSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLV 270
S++ +L+ D+ +KL + + V+ TF T K +C +
Sbjct: 111 LSKDCNYLICSVRDDTIKLLDLRKNQVISTF------TNEHFKISCDFARASFNSSGLKI 164
Query: 271 ISGNDSGSMCVWNVYSKNLVQKIDEKHRNS-PLISISASYDKVATLSLNGECNLF 324
G+ G++ +WNV ++ + H + +S S + + +A++ N C ++
Sbjct: 165 ACGSADGAIYIWNV--NGFLEATLKGHSTAVNAVSWSPNNNMLASVGKNKRCTIY 217
>7290304 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 535
Score = 57.4 bits (137), Expect = 3e-08
Identities = 49/204 (24%), Positives = 94/204 (46%), Gaps = 13/204 (6%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM-GHTA 111
+Y + + ++K + ++ + D + +A+G E+ V++ I RL GHTA
Sbjct: 65 IYNLVTMLVVKNLSRFQKTAYGATFRQDGRLLAAGDEEGHVKLFDTTSRNILRLFKGHTA 124
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM-SAHSDAVVSIDIPKFDSSILSS 170
PV + L S D+S++ W V + ++T H+D V + + + S
Sbjct: 125 PVHRTFFTADKLQLASFGDDKSVRLWDVANEKVVQTYEDTHTDYVRAGAMHPQAGHMFVS 184
Query: 171 GSYDGLIRIFDTESGHCL-KTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKL 229
G YDG I+++DT + + +TL D P+ ++ F NG + V + + V++
Sbjct: 185 GGYDGKIKLYDTRAETAVQRTL---------DHGAPVESMLFLPNGS-IFVSAGGSQVRV 234
Query: 230 WEYTRGTVVRTFLWPHQETKAKLK 253
W+ G + T + H +T L+
Sbjct: 235 WDLISGCRLLTMMSQHHKTVTCLR 258
>YBR103w [B] KOG0273 Beta-transducin family (WD-40 repeat) protein
Length = 535
Score = 57.0 bits (136), Expect = 4e-08
Identities = 60/270 (22%), Positives = 108/270 (39%), Gaps = 40/270 (14%)
Query: 72 INCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMD 131
+ CL WS D I +G E+ + + + + L H AP++S+ +N G + S ++
Sbjct: 223 VTCLAWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVE 282
Query: 132 ESIKEWHVLSGTALK------------TMSAHS-DAVVSIDIPKFDSSILSSGSYDGLIR 178
W+V+SGT ++ HS D + +D+ D G I
Sbjct: 283 NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIF 342
Query: 179 IFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
++ + T I G PIS ++F+ K LL S D +++W G
Sbjct: 343 VYQ------ITEKTPTGKLIGHHG--PISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQ 394
Query: 239 RTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNL--VQKIDEK 296
F + H ++ + D VIS + GS+ +W++ L + +D
Sbjct: 395 NCF-YGHSQSIVSASW----------VGDDKVISCSMDGSVRLWSLKQNTLLALSIVD-- 441
Query: 297 HRNSPLIS--ISASYDKVATLSLNGECNLF 324
P+ + IS K A ++G+ N++
Sbjct: 442 --GVPIFAGRISQDGQKYAVAFMDGQVNVY 469
>At1g10580 [S] KOG0282 mRNA splicing factor
Length = 616
Score = 57.0 bits (136), Expect = 4e-08
Identities = 59/220 (26%), Positives = 100/220 (44%), Gaps = 20/220 (9%)
Query: 108 GHTAPVISICYNNK-GNILCSSSMDESIKEWHVL-SGTALKTMSAHSDAVVSIDIPKFDS 165
GHT V +I + K G++L S+ MD +K W V SG ++T H+ AV I S
Sbjct: 280 GHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGS 339
Query: 166 SILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDN 225
L++G YD I+ +DTE+G + T + K VV ++ +N LL D
Sbjct: 340 KFLTAG-YDKNIKYWDTETGQVISTFSTGK----IPYVVKLNPDDDKQN--ILLAGMSDK 392
Query: 226 VVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVY 285
+ W+ G V + + Q A + I + ++ +D S+ VW
Sbjct: 393 KIVQWDINTGEVTQEY---DQHLGA-------VNTITFVDNNRRFVTSSDDKSLRVWEFG 442
Query: 286 SKNLVQKIDEKHRNS-PLISISASYDKVATLSLNGECNLF 324
+++ I E H +S P IS+ + + +A SL+ + ++
Sbjct: 443 IPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIY 482
Score = 56.6 bits (135), Expect = 5e-08
Identities = 39/147 (26%), Positives = 68/147 (45%), Gaps = 9/147 (6%)
Query: 103 IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS-DAVVSIDIP 161
+R MGH V IC++N G+ ++ D++IK W +G + T S VV ++
Sbjct: 319 MRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPD 378
Query: 162 KFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVK 221
+IL +G D I +D +G T YD+ A ++T+ F N + +
Sbjct: 379 DDKQNILLAGMSDKKIVQWDINTGEV--TQEYDQHLGA------VNTITFVDNNRRFVTS 430
Query: 222 SLDNVVKLWEYTRGTVVRTFLWPHQET 248
S D +++WE+ V++ PH +
Sbjct: 431 SDDKSLRVWEFGIPVVIKYISEPHMHS 457
>7303130 [R] KOG0645 WD40 repeat protein
Length = 335
Score = 57.0 bits (136), Expect = 4e-08
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 23/207 (11%)
Query: 38 PDGELIAIC-QNTDMLVYEISS---SKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
P G + A C ++ + ++ ++ S L+ HK I + WSP + +AS S D T
Sbjct: 24 PKGNVFASCGEDKAIRIWSLTGNTWSTKTILSDGHKRTIREIRWSPCGQYLASASFDATT 83
Query: 94 EITHIIYGRIR---RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALK---T 147
I G L GH V S+ ++ G +L + S D+S+ W V +
Sbjct: 84 AIWSKSSGEFECNATLEGHENEVKSVSWSRSGGLLATCSRDKSVWIWEVAGDDEFECAAV 143
Query: 148 MSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPIS 207
++ H+ V + + IL+S SYD I++F E D DW + +
Sbjct: 144 LNPHTQDVKRV-VWHPTKDILASASYDNTIKMFAEE--------PIDNDWDCTATLTSHT 194
Query: 208 T----VKFSRNGKFLLVKSLDNVVKLW 230
+ + F +G+ L+ S D +K+W
Sbjct: 195 STVWGIDFDADGERLVSCSDDTTIKIW 221
>7296245 [A] KOG0265 U5 snRNP-specific protein-like factor and related
proteins
Length = 347
Score = 57.0 bits (136), Expect = 4e-08
Identities = 43/208 (20%), Positives = 89/208 (42%), Gaps = 21/208 (10%)
Query: 79 PDSKCIASGSEDFTVEITHIIYG--RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKE 136
P+ + + S D + I + + + GH+ V+ + G+ + + S D+++
Sbjct: 65 PEGELLLSSGFDRQIYIWQVYEDCENVMAMSGHSGAVMEAHFTPDGSHIFTCSTDKTLAF 124
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
W + +G + H + V S+ + +L SGS D I+I+D H TL
Sbjct: 125 WDIATGQRQRRFKGHGNFVNSVQGSRRGQQLLCSGSDDRTIKIWDARKKHAAHTL----- 179
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNC 256
+ ++ V F G+ ++ +DN VK+W+ + V+ L H +T +
Sbjct: 180 ----ESPFQVTAVCFGDTGEQVISGGIDNEVKIWDIRKQAVLH-HLRGHSDTITGMS--- 231
Query: 257 GLELIYPQGKDPLVISGNDSGSMCVWNV 284
+ P+G +++ ++ VW+V
Sbjct: 232 ----LSPEG--DFILTNAMDNTLRVWDV 253
>Hs18550925 [S] KOG0295 WD40 repeat-containing protein
Length = 505
Score = 56.6 bits (135), Expect = 5e-08
Identities = 38/158 (24%), Positives = 80/158 (50%), Gaps = 12/158 (7%)
Query: 35 QISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCI----ASGSE 89
Q + DG LIA C N + V+ +++ + H+ + C+ W+P+S A+GSE
Sbjct: 347 QPNQDGTLIASCSNDQTVRVWVVATMQCKAELREHEHVVECISWAPESSYSSISEATGSE 406
Query: 90 -----DFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT 143
D T+++ + G + L+GH V + +++ G + S + D+++ W +
Sbjct: 407 TKKKWDKTIKMWDVSTGMCLMTLVGHGNWVCEVLFSSGGKFILSCADDKTLHVWDYKNRQ 466
Query: 144 ALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
+KT++A+ V S+D K + + +GS +++++
Sbjct: 467 CMKTLNAYEHFVTSLDFHK-TAPYVVTGSVAQTVKVWE 503
Score = 53.1 bits (126), Expect = 5e-07
Identities = 34/130 (26%), Positives = 59/130 (45%), Gaps = 16/130 (12%)
Query: 119 NNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID-IPKFDSSILSSGS----- 172
N G ++ S S D++++ W V + + H V I P+ S +S +
Sbjct: 349 NQDGTLIASCSNDQTVRVWVVATMQCKAELREHEHVVECISWAPESSYSSISEATGSETK 408
Query: 173 --YDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLW 230
+D I+++D +G CL TL +W+ E V FS GKF+L + D + +W
Sbjct: 409 KKWDKTIKMWDVSTGMCLMTLVGHGNWVCE--------VLFSSGGKFILSCADDKTLHVW 460
Query: 231 EYTRGTVVRT 240
+Y ++T
Sbjct: 461 DYKNRQCMKT 470
>At3g42660 [R] KOG1274 WD40 repeat protein
Length = 951
Score = 56.6 bits (135), Expect = 5e-08
Identities = 48/208 (23%), Positives = 92/208 (44%), Gaps = 9/208 (4%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIR-RLMGHTAPVISICYNNKGNILC 126
H++ + L S DS +ASGS D V++ G + + T P+ + +N G++L
Sbjct: 61 HQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSGSLLA 120
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGH 186
++ DE IK + G+ ++ + H V +D + +L+S G + ++ ++G
Sbjct: 121 AAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHP-NGELLASIDTTGTVLCWELQNG- 178
Query: 187 CLKTLTYDKDWIAEDGVVPISTV---KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLW 243
+++ +A D S V ++S +G+ L V L N V +++ G +
Sbjct: 179 ---VVSFTLKGVAPDTGFNTSIVNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRG 235
Query: 244 PHQETKAKLKYNCGLELIYPQGKDPLVI 271
H E L + + I G D V+
Sbjct: 236 DHLEAICYLTWAPNGKYIATSGLDKQVL 263
>Hs18677720 [R] KOG0266 WD40 repeat-containing protein
Length = 421
Score = 56.2 bits (134), Expect = 6e-08
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 9/191 (4%)
Query: 48 NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCI-ASGSEDFTVEITHIIY--GRIR 104
N + ++++ + K++ H E + L ++PD I S S D T+ + + ++
Sbjct: 149 NGRIKIWDVYTGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMK 208
Query: 105 RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFD 164
L GH V S ++ ++LCS +++ W++ T ++ + H VV+ D D
Sbjct: 209 VLRGHQNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSP-D 267
Query: 165 SSILSSGSYDGLIRIFDTESGHCLKTLTY---DKDWIAEDGVVP--ISTVKFSRNGKFLL 219
++L++ SYD + I+D +G L + I G + +V FS +G +
Sbjct: 268 GALLATASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVA 327
Query: 220 VKSLDNVVKLW 230
+ D +V+ W
Sbjct: 328 SLADDKMVRFW 338
>Hs18599374 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 56.2 bits (134), Expect = 6e-08
Identities = 60/236 (25%), Positives = 96/236 (40%), Gaps = 58/236 (24%)
Query: 108 GHTAPVISICYNNKGNILCSSSMDESIKEWHV--------------------------LS 141
GH V SI + G CS S D+ +K W L+
Sbjct: 187 GHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLT 246
Query: 142 GTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAED 201
T + T+S H +AV S+ D+ + S S+D IR++D ESG TLT +K
Sbjct: 247 RTPIVTLSGHMEAVSSVLWS--DAEEICSASWDHTIRVWDVESGSLKSTLTGNK------ 298
Query: 202 GVVPISTVKFSRNGKFLLVKSLDNVVKLWE--YTRGTVVRTFLWPHQETKAKLKYNCGLE 259
+ + +S K L S D ++LW+ G++V L H +K++
Sbjct: 299 ---VFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWS---- 351
Query: 260 LIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATL 315
P + L+ SGS+ N+V+ D + +PL ++A DKV ++
Sbjct: 352 ---PTHEQQLI-----SGSL-------DNIVKLWDTRSCKAPLYDLAAHEDKVLSV 392
>CE14894 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 793
Score = 56.2 bits (134), Expect = 6e-08
Identities = 50/178 (28%), Positives = 85/178 (47%), Gaps = 20/178 (11%)
Query: 25 PASGKISTSCQISPDGELIAICQNTDMLVYEISSSK-----MMKLTTT-----HKECINC 74
P +ST C I +L + +T + +I + K + KLT + H + +NC
Sbjct: 427 PFLASVSTDCTI----KLWGLGVSTKLKEVKIDAEKDFVEQLPKLTCSSTMVAHGKDVNC 482
Query: 75 LCWSPDSKCIASGSEDFTVEI----THIIY-GRIRRLMGHTAPVISICYNNKGNILCSSS 129
+ S IA+G D V++ TH + G L GH V + + + L S S
Sbjct: 483 VDISESDALIATGGMDKLVKLWQVDTHKMQLGIAGTLSGHRRGVGDVKFAKNSHKLASCS 542
Query: 130 MDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHC 187
D +IK W++ + L+T+S HS AV + + DS ++S+ S G+I+I+ ++ C
Sbjct: 543 GDMTIKIWNISEKSCLQTISGHSCAVFRVIFARNDSQLISADS-AGIIKIWTIKTADC 599
Score = 53.5 bits (127), Expect = 4e-07
Identities = 71/342 (20%), Positives = 140/342 (40%), Gaps = 73/342 (21%)
Query: 17 LQFDKQVLPASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLC 76
L+ +Q++ +I + C + D +A+ NT + + + +L H E + +
Sbjct: 308 LKIARQIVGFHDEIYSCCLLGKDESHMAVASNTSEIRLYNTKTLDCQLIRGHTESVLSVV 367
Query: 77 WSP--DSKCIASGSEDFTVEITHIIYGR----------IRRLMGHTAPVISICYNNKGN- 123
SP D+ +AS S+D ++ ++ + GH V ++ +N G
Sbjct: 368 -SPTWDTSLLASCSKDNSIIFWRLVTSPENDSCSTLVPVAAATGHANTVTALAISNTGRA 426
Query: 124 -ILCSSSMDESIKEWHVLSGTALK---------------------TMSAHSDAVVSIDIP 161
L S S D +IK W + T LK TM AH V +DI
Sbjct: 427 PFLASVSTDCTIKLWGLGVSTKLKEVKIDAEKDFVEQLPKLTCSSTMVAHGKDVNCVDIS 486
Query: 162 KFDSSILSSGSYDGLIRIFDTESGHCLK-----TLTYDKDWIAEDGVVPISTVKFSRNGK 216
+ D +++++G D L++++ ++ H ++ TL+ + + + VKF++N
Sbjct: 487 ESD-ALIATGGMDKLVKLWQVDT-HKMQLGIAGTLSGHRRGVGD--------VKFAKNSH 536
Query: 217 FLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDS 276
L S D +K+W + + ++T ++C + + D +IS + +
Sbjct: 537 KLASCSGDMTIKIWNISEKSCLQTI----------SGHSCAVFRVIFARNDSQLISADSA 586
Query: 277 GSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLN 318
G + +W + + + SI A DK+ +LS N
Sbjct: 587 GIIKIWTIKTADCE------------CSIDAHTDKIWSLSKN 616
>7303841 [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 787
Score = 56.2 bits (134), Expect = 6e-08
Identities = 38/166 (22%), Positives = 87/166 (51%), Gaps = 18/166 (10%)
Query: 44 AICQNTDMLVYEISSSK---------MMKLTTTHKECINCLCWSPDSKCIASGSEDFTVE 94
++ Q+ M V+++ SK + +H + +NC+ ++P++K IA+ S+D T +
Sbjct: 444 SVSQDGSMKVWQLVRSKEDRNSYSFNLRYAALSHDKEVNCVAYAPNNKLIATASQDKTAK 503
Query: 95 I----THIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSA 150
+ ++ + G +R GHT V S+ ++ I+ +SS D +++ W + + + +K
Sbjct: 504 VWLAESNTLQGVLR---GHTRGVWSVRFSPVDQIVLTSSSDCTLRIWSISNFSCIKRFDQ 560
Query: 151 HSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
++ + I+S+ S DGL+++++ ++ CL++L D
Sbjct: 561 EC-TILRAEFLDHGKFIISAAS-DGLLKLWNIKTNTCLQSLDEHND 604
>7303631 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 680
Score = 56.2 bits (134), Expect = 6e-08
Identities = 47/184 (25%), Positives = 85/184 (45%), Gaps = 20/184 (10%)
Query: 114 ISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSY 173
I +C N G L S+S D ++K W+ G + T+ H D V ++ K D ++S
Sbjct: 79 IVLCCN--GRNLISASCDTTVKVWNAQKGFCMSTLRTHRDYVQALAYAK-DREQVASAGL 135
Query: 174 DGLIRIFDTESGHCLKTLTYDKDWIAEDGVV----PISTVKFSRNGKFLLVKSLDNVVKL 229
D I ++D + L LT + + + I ++ + +G ++ S +N++++
Sbjct: 136 DKAIFLWDVNT---LTALTASNNTVTTSSLTGSKDSIYSLAMNPSGTVIVSGSTENILRI 192
Query: 230 WEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNL 289
W+ R + R L H E N ++ P G V+SG+ G++ VWN+ +
Sbjct: 193 WD-PRTCMRRMKLRGHTE-------NVRCLVVSPDGNQ--VVSGSSDGTIKVWNLGQQRC 242
Query: 290 VQKI 293
VQ I
Sbjct: 243 VQTI 246
>7296695 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 439
Score = 56.2 bits (134), Expect = 6e-08
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 54 YEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRR-LMGHTAP 112
Y S+ +K+ HKE I + +SP SGS+D T+ I + + R L GH A
Sbjct: 214 YWQSNMNNVKMYQAHKEAIRGISFSPTDSKFVSGSDDGTLRIWDFMRCQEERVLRGHGAD 273
Query: 113 VISICYNNKGNILCSSSMD--ESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSS 170
V + ++ + ++ S S D + IK W SG AL T+ AH V+ + + + L +
Sbjct: 274 VKCVHWHPQKGMIVSGSKDNQQPIKIWDPKSGIALATLHAHKSTVMDLKW-NDNGNWLVT 332
Query: 171 GSYDGLIRIFD 181
S D L+++FD
Sbjct: 333 ASRDHLLKLFD 343
>7290895 [R] KOG0286 G-protein beta subunit
Length = 358
Score = 56.2 bits (134), Expect = 6e-08
Identities = 53/241 (21%), Positives = 94/241 (38%), Gaps = 28/241 (11%)
Query: 29 KISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGS 88
K+ Q D L I + + + Y + K K+ H+ + C WSPD + I S S
Sbjct: 32 KLEEERQKLNDVNLSNIAERLEQIAYV--NIKPRKVLKGHQAKVLCTDWSPDKRHIISSS 89
Query: 89 ED--------FTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVL 140
+D FT H + T +++ Y GN + +D + + +
Sbjct: 90 QDGRLIIWDAFTTNKEHAV-------TMPTTWIMACAYAPSGNFVACGGLDNKVTVYPIT 142
Query: 141 SGTAL----KTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
S + +T+ H+ + P D IL +GS D ++D ESG L++
Sbjct: 143 SDEEMAAKKRTVGTHTSYMSCCIYPNSDQQIL-TGSGDSTCALWDVESGQLLQS------ 195
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNC 256
+ G V + + G + S D + +W+ G VV++F + + + C
Sbjct: 196 FHGHSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSFEGHQSDVNSVKFHPC 255
Query: 257 G 257
G
Sbjct: 256 G 256
Score = 55.8 bits (133), Expect = 8e-08
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 15/212 (7%)
Query: 37 SPDGE-LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
SPD +I+ Q+ +++++ ++ T I ++P +A G D V +
Sbjct: 79 SPDKRHIISSSQDGRLIIWDAFTTNKEHAVTMPTTWIMACAYAPSGNFVACGGLDNKVTV 138
Query: 96 THI-----IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSA 150
I + + R + HT+ + Y N + + S D + W V SG L++
Sbjct: 139 YPITSDEEMAAKKRTVGTHTSYMSCCIYPNSDQQILTGSGDSTCALWDVESGQLLQSFHG 198
Query: 151 HSDAVVSIDI-PKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
HS V++ID+ P + SGS D + I+D SGH +++ E +++V
Sbjct: 199 HSGDVMAIDLAPNETGNTFVSGSCDRMAFIWDMRSGHVVQSF--------EGHQSDVNSV 250
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTF 241
KF G + S D+ +L++ V F
Sbjct: 251 KFHPCGDAIATGSDDSSCRLYDMRADREVAVF 282
>7301145 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 1225
Score = 55.8 bits (133), Expect = 8e-08
Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 5/131 (3%)
Query: 103 IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPK 162
+RR +GH + V + ++ G + + + D IK W G L T+ S + I I
Sbjct: 176 LRRTVGHLSSVYCVLFDRTGRYIITGADDLLIKIWSAADGRLLATLRGASSEITDIAI-N 234
Query: 163 FDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKS 222
D+++L++GS D ++R++D ++ + L+ I P K+L+ S
Sbjct: 235 LDNTMLAAGSLDHILRVWDMQTTSPIAVLSAHTGMITSVNFCPSPRSDL----KYLVTTS 290
Query: 223 LDNVVKLWEYT 233
D + W+Y+
Sbjct: 291 TDGSIAFWQYS 301
>Hs4505465_2 [TU] KOG1786 Lysosomal trafficking regulator LYST and related BEACH
and WD40 repeat proteins
Length = 631
Score = 55.8 bits (133), Expect = 8e-08
Identities = 65/273 (23%), Positives = 113/273 (40%), Gaps = 35/273 (12%)
Query: 32 TSCQISPDGELIAICQNTDMLVYEISSSKMMK--LTTTHKECINCLCWSPDSKCIASGSE 89
T +S +G + L SKM++ ++ ++ +CL D+ I S S
Sbjct: 348 TGITVSRNGSSVFTTSQDSTLKMFSKESKMLQRSISFSNMALSSCLLLPGDATVITS-SW 406
Query: 90 DFTVEITHIIYGRIR-RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM 148
D V I +GR + LMGH V IC+++ N L S+S D ++K W + T
Sbjct: 407 DNNVYFYSIAFGRRQDTLMGHDDAVSKICWHD--NRLYSASWDSTVKVWSGVPAEMPGTK 464
Query: 149 SAHSDAV------VSIDIPKFD--SSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAE 200
H D + VS+D + S++L SG+ +G + I+D L T T
Sbjct: 465 RHHFDLLAELEHDVSVDTISLNAASTLLVSGTKEGTVNIWD------LTTATLMHQIPCH 518
Query: 201 DGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLEL 260
G+V FS + + +L D + + + G ++ + +T N
Sbjct: 519 SGIV--CDTAFSPDSRHVLSTGTDGCLNVIDVQTGMLISSMTSDEPQTCFVWDGNS---- 572
Query: 261 IYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKI 293
V+SG+ SG + VW++ + ++I
Sbjct: 573 ---------VLSGSQSGELLVWDLLGAKISERI 596
>Hs13994164_1 [R] KOG0274 Cdc4 and related F-box and WD-40 proteins
Length = 756
Score = 55.8 bits (133), Expect = 8e-08
Identities = 44/180 (24%), Positives = 76/180 (41%), Gaps = 26/180 (14%)
Query: 108 GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSI 167
GH V ++ + N L S S D SI+ W + SG + H + +D+ K +
Sbjct: 451 GHAGSVRALFLCEEENFLLSGSYDLSIRYWDLKSGVCTRIFGGHQGTITCMDLCK---NR 507
Query: 168 LSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVV 227
L SG D ++++D ++G CLKT + KD PI + N +++ +V
Sbjct: 508 LVSGGRDCQVKVWDVDTGKCLKTFRH-KD--------PILATRI--NDTYIVSSCERGLV 556
Query: 228 KLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSK 287
K+W +V+T K L + Q ++SG+ G + W++ K
Sbjct: 557 KVWHIAMAQLVKTLSGHEGAVKC---------LFFDQWH---LLSGSTDGLVMAWSMVGK 604
>SPAC6B12.15 [T] KOG0279 G protein beta subunit-like protein
Length = 314
Score = 55.5 bits (132), Expect = 1e-07
Identities = 61/247 (24%), Positives = 109/247 (43%), Gaps = 31/247 (12%)
Query: 68 HKECINCLCWSPDSKCIA-SGSEDFTVEITHIIYGRI------RRLMGHTAPVISICYNN 120
H + L +P++ I SGS D ++ + +++ + RRL GH+ V +
Sbjct: 14 HSGWVTSLSTAPENPDILLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSF 73
Query: 121 KGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
+ S+S D++I+ W + G H+ V+S+ I D+ + SGS D I+I+
Sbjct: 74 DSHYALSASWDKTIRLWDLEKGECTHQFVGHTSDVLSVSISP-DNRQVVSGSRDKTIKIW 132
Query: 181 DTESGHCLKTLT--YDKDWIAEDGVVPISTVKFSRNGKFLLVKSL--DNVVKLWEYTRGT 236
+ G+C T+T DW +S V+FS N L S D VK+W+ +
Sbjct: 133 NI-IGNCKYTITDGGHSDW--------VSCVRFSPNPDNLTFVSAGWDKAVKVWDLETFS 183
Query: 237 VVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEK 296
+RT + H + + I P G L SG G++ +W++ + ++ K
Sbjct: 184 -LRTSHYGHTGYVSAV-------TISPDGS--LCASGGRDGTLMLWDLNESTHLYSLEAK 233
Query: 297 HRNSPLI 303
+ L+
Sbjct: 234 ANINALV 240
Score = 51.6 bits (122), Expect = 2e-06
Identities = 47/208 (22%), Positives = 98/208 (46%), Gaps = 9/208 (4%)
Query: 33 SCQISPDG-ELIAICQNTDMLVYEISSSKMMKLTTT-HKECINCLCWSP--DSKCIASGS 88
S ISPD ++++ ++ + ++ I + +T H + ++C+ +SP D+ S
Sbjct: 110 SVSISPDNRQVVSGSRDKTIKIWNIIGNCKYTITDGGHSDWVSCVRFSPNPDNLTFVSAG 169
Query: 89 EDFTVEITHIIYGRIRRL-MGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKT 147
D V++ + +R GHT V ++ + G++ S D ++ W + T L +
Sbjct: 170 WDKAVKVWDLETFSLRTSHYGHTGYVSAVTISPDGSLCASGGRDGTLMLWDLNESTHLYS 229
Query: 148 MSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP-I 206
+ A ++ + P ++GS IRIFD E+ + LT D + + P
Sbjct: 230 LEAKANINALVFSPNRYWLCAATGSS---IRIFDLETQEKVDELTVDFVGVGKKSSEPEC 286
Query: 207 STVKFSRNGKFLLVKSLDNVVKLWEYTR 234
++ +S +G+ L DN++++W+ T+
Sbjct: 287 ISLTWSPDGQTLFSGWTDNLIRVWQVTK 314
>ECU08g1250 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 759
Score = 55.5 bits (132), Expect = 1e-07
Identities = 37/144 (25%), Positives = 68/144 (46%), Gaps = 7/144 (4%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM---GH 109
+YE+ + +K H + I + P + S+D T+++ I G + + M GH
Sbjct: 119 IYELGKYRKVKTFHAHDDFIRKIESHPQDPSFLTASDDATLKMW-IYQGEVSQAMTYTGH 177
Query: 110 TAPVISIC-YNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSIL 168
V+ +C Y N + S S+D ++K W V +KT H+ + SI L
Sbjct: 178 EHFVMDVCFYPNDASKFVSCSLDSTVKVWSVEQPHCVKTFKGHTSGINSICF--LGRDCL 235
Query: 169 SSGSYDGLIRIFDTESGHCLKTLT 192
SG+ D ++++D ++ C+ TL+
Sbjct: 236 VSGADDLTLKVWDFQTAQCITTLS 259
>At2g26490 [R] KOG4155 FOG: WD40 repeat
Length = 465
Score = 55.5 bits (132), Expect = 1e-07
Identities = 46/180 (25%), Positives = 80/180 (43%), Gaps = 27/180 (15%)
Query: 109 HTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSIL 168
H V + N++ +L S+S D +IK W + L+++ AH DAV S + +I+
Sbjct: 205 HADAVSCLSLNDEQGLLYSASWDRTIKVWRIADSKCLESIPAHDDAVNS--VVSTTEAIV 262
Query: 169 SSGSYDGLIRIFDTE-----SGHCL-KTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKS 222
SGS DG ++ + + + H L +TLT + ++ + S+NG + S
Sbjct: 263 FSGSADGTVKAWKRDQQGKYTKHTLMQTLTKQES--------AVTALAVSKNGAAVYFGS 314
Query: 223 LDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVW 282
D +V WE + L H+ L ++ + LV SG+ ++CVW
Sbjct: 315 SDGLVNFWEREKQLNYGGILKGHK-----------LAVLCLEVAGSLVFSGSADKTICVW 363
>SPAC4D7.05 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 55.1 bits (131), Expect = 1e-07
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GH P+ I YN+ G++L S + D+ I W +G L T H+ A+ + DI K S
Sbjct: 6 LQGHERPLTQIKYNHDGDLLFSCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINK-SS 64
Query: 166 SILSSGSYDGLIRIFDTESG 185
+++ SG+ D +R++D ++G
Sbjct: 65 TLMVSGAADNTMRLWDVKTG 84
>Hs20357529 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 55.1 bits (131), Expect = 1e-07
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDML--VYEISSS----KMMKLTTTHKECINCLCW 77
+P +C +P G +A C D + +Y + + ++ + H ++C +
Sbjct: 93 IPLRSSWVMTCAYAPSGNFVA-CGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSCCRF 151
Query: 78 SPDSKCIASGSEDFTVEITHIIYGRIR-RLMGHTAPVISICYNNKGNILCSSSMDESIKE 136
D++ I S S D T + I G+ GH+ V+S+ G S + D SIK
Sbjct: 152 LDDNQIITS-SGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPDGRTFVSGACDASIKL 210
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
W V +T H + ++ + ++GS D R+FD + + L Y D
Sbjct: 211 WDVRDSMCRQTFIGHESDINAVAFFP-NGYAFTTGSDDATCRLFDLRADQ--ELLMYSHD 267
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
I + I++V FSR+G+ LL D +W+ +G
Sbjct: 268 NI----ICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKG 302
>ECU11g1750 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 556
Score = 55.1 bits (131), Expect = 1e-07
Identities = 44/163 (26%), Positives = 74/163 (44%), Gaps = 12/163 (7%)
Query: 52 LVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM-GHT 110
+V+ + +SK +L + + + + P+S + +GS D V + I + R+ GHT
Sbjct: 389 IVWSVMTSKPERLIISSLSDVTAVKFHPNSSYLFTGSSDHRVRMHDISTASVVRIFCGHT 448
Query: 111 APVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSS 170
V + ++ G L S S D ++ W + S L H + V S+ F S+L+S
Sbjct: 449 DTVTCMDVSHCGKFLASGSKDRTVLLWDIQSSKLLGKYVGHENTVFSVSF-CFYGSVLAS 507
Query: 171 GSYDGLIRIFD--TESGHCLKTLTYDKDWIAEDGVVPISTVKF 211
D +R++D G CL T Y K+ P+ VKF
Sbjct: 508 CGADNSVRLWDRTDHKGGCLGTY-YTKN-------TPLLCVKF 542
Score = 51.2 bits (121), Expect = 2e-06
Identities = 56/262 (21%), Positives = 113/262 (42%), Gaps = 34/262 (12%)
Query: 32 TSCQISPDGELIAI-CQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSED 90
T+ +IS D +L+A +++ + VY +++ + KL ++ + D K + +E+
Sbjct: 257 TAAEISNDLKLMACGFKDSYVEVYSLTNESLKKLKSSSELA------KSDIKTL---NEE 307
Query: 91 FTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSA 150
E+ G +L+GH+ PV + + + L SSS D ++ W + L A
Sbjct: 308 KFEEV-----GSSYKLVGHSGPVYGLKFFSSNKFLVSSSQDCTVCLWSLDLLCLLAVYKA 362
Query: 151 HSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVK 210
H+ V +D+ D +SG+ D ++ +T + + + ++ VK
Sbjct: 363 HAFPVWCVDVAPND-YFFASGAGDRQAIVW--------SVMTSKPERLIISSLSDVTAVK 413
Query: 211 FSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLV 270
F N +L S D+ V++ + + +VVR F +CG +
Sbjct: 414 FHPNSSYLFTGSSDHRVRMHDISTASVVRIFCGHTDTVTCMDVSHCG----------KFL 463
Query: 271 ISGNDSGSMCVWNVYSKNLVQK 292
SG+ ++ +W++ S L+ K
Sbjct: 464 ASGSKDRTVLLWDIQSSKLLGK 485
Score = 48.9 bits (115), Expect = 1e-05
Identities = 38/193 (19%), Positives = 86/193 (43%), Gaps = 10/193 (5%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG 101
L++ Q+ + ++ + ++ + H + C+ +P+ ASG+ D + ++
Sbjct: 337 LVSSSQDCTVCLWSLDLLCLLAVYKAHAFPVWCVDVAPNDYFFASGAGDRQAIVWSVMTS 396
Query: 102 RIRRLM-GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDI 160
+ RL+ + V ++ ++ + L + S D ++ + + + ++ H+D V +D+
Sbjct: 397 KPERLIISSLSDVTAVKFHPNSSYLFTGSSDHRVRMHDISTASVVRIFCGHTDTVTCMDV 456
Query: 161 PKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLV 220
L+SGS D + ++D +S L ++ + V +V F G L
Sbjct: 457 SHC-GKFLASGSKDRTVLLWDIQSSKLLGK------YVGHENTV--FSVSFCFYGSVLAS 507
Query: 221 KSLDNVVKLWEYT 233
DN V+LW+ T
Sbjct: 508 CGADNSVRLWDRT 520
>At5g53500 [S] KOG0283 WD40 repeat-containing protein
Length = 654
Score = 55.1 bits (131), Expect = 1e-07
Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 21/246 (8%)
Query: 80 DSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV 139
DS C+ F ++ I+ + GHT V+ I ++ K N L S+SMD++++ W V
Sbjct: 303 DSACVV-----FPPKVFRIMEKPLYEFRGHTGEVLDISWS-KDNYLLSASMDKTVRLWKV 356
Query: 140 LSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIA 199
S L AH+ V S+ + + SGS DG +RI++ + DW
Sbjct: 357 GSNDCLGVF-AHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNISGCSVV-------DWAD 408
Query: 200 EDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTV-VRTFLWPHQETKAKLKYNCGL 258
+ IS V + +G+ ++ SL+ + + + + + + + H + K+ K G
Sbjct: 409 LKDI--ISAVCYRPDGQGGIIGSLNGSCRFFNMSGEFLELDSQIHLHNKKKSSNKRITGF 466
Query: 259 ELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLN 318
+ + + LV+S + V + N+V+K + L S S + D +S
Sbjct: 467 QFLPQEPTKVLVVSADSK----VRILQGNNVVRKYKGVCKTRSLTSASLTSDGKHIVSAC 522
Query: 319 GECNLF 324
+ N++
Sbjct: 523 EDSNVY 528
>YPL151c [A] KOG0285 Pleiotropic regulator 1
Length = 451
Score = 54.3 bits (129), Expect = 2e-07
Identities = 41/194 (21%), Positives = 89/194 (45%), Gaps = 13/194 (6%)
Query: 60 KMMKLTTTHKECINCLCWSP-DSKCIASGSEDFTVEITHIIYGRIRR-LMGHTAPVISIC 117
K+ ++ H + C+ P D++ +GS D T+++ + G+++ L GH V +
Sbjct: 130 KLSRVINGHLGWVRCVAIDPVDNEWFITGSNDTTMKVWDLATGKLKTTLAGHVMTVRDVA 189
Query: 118 YNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDI-PKFDSSILSSGSYDGL 176
+++ L S S D+++K W + ++ H V ++ I P D ++++ D +
Sbjct: 190 VSDRHPYLFSVSEDKTVKCWDLEKNQIIRDYYGHLSGVRTVSIHPTLD--LIATAGRDSV 247
Query: 177 IRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGT 236
I+++D + + TL K PI+ V+ + ++ S D V+LW+ G
Sbjct: 248 IKLWDMRTRIPVITLVGHKG--------PINQVQCTPVDPQVVSSSTDATVRLWDVVAGK 299
Query: 237 VVRTFLWPHQETKA 250
++ + +A
Sbjct: 300 TMKVLTHHKRSVRA 313
>SPAC821.08c [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 488
Score = 54.3 bits (129), Expect = 2e-07
Identities = 51/267 (19%), Positives = 116/267 (43%), Gaps = 26/267 (9%)
Query: 33 SCQISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDF 91
S + S DG +++ ++ +Y++ S ++ H+ + CL W + ++SGS
Sbjct: 226 SVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSW--NRHVLSSGSRSG 283
Query: 92 TV--EITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMS 149
+ I +I L GH++ V + + + G L S D ++ W S T +
Sbjct: 284 AIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKT 343
Query: 150 AHSDAVVSIDIPKFDSSILSS--GSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPIS 207
H+ AV ++ + S++L++ G+ D I ++ +G + T+ D ++
Sbjct: 344 NHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV---------DAGSQVT 394
Query: 208 TVKFSRNGKFLLVKS--LDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQG 265
++ +S + K ++ DN + +W Y+ + + P +T+ + P G
Sbjct: 395 SLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVL------YSALSPDG 448
Query: 266 KDPLVISGNDSGSMCVWNVYSKNLVQK 292
+ ++ + ++ W VY + V++
Sbjct: 449 R--ILSTAASDENLKFWRVYDGDHVKR 473
>CE05372 [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 496
Score = 54.3 bits (129), Expect = 2e-07
Identities = 45/195 (23%), Positives = 83/195 (42%), Gaps = 11/195 (5%)
Query: 38 PDGELIAI-CQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEIT 96
P+G +A C ++ +Y++++ K + H + + + + PD +G D +
Sbjct: 306 PNGHHLATACFDSTWRMYDLTTKKELLYQEGHSKSVADVAFHPDGSVALTGGHDCYGRVW 365
Query: 97 HIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
+ GR I L GHT + S+ + G + + S D S+K W + TM AH+ V
Sbjct: 366 DMRTGRCIMFLDGHTKEIHSVEWMPNGYEMITGSSDNSMKVWDLRMRRNTYTMPAHTSVV 425
Query: 156 VSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNG 215
+ L S S+D ++++ T L+ L + I V S +G
Sbjct: 426 TRVRADA-AGQYLVSASFDCTLKMWSTTGWQPLRQL--------QGHDTRILCVDISPDG 476
Query: 216 KFLLVKSLDNVVKLW 230
+++ + D KLW
Sbjct: 477 QWMCSSAFDRTFKLW 491
>At2g46280 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 328
Score = 54.3 bits (129), Expect = 2e-07
Identities = 52/202 (25%), Positives = 91/202 (44%), Gaps = 29/202 (14%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
+ GH P+ + YN +G++L S + D + W +G L T H+ AV D+ + DS
Sbjct: 6 MKGHERPLTFLRYNREGDLLFSCAKDHTPTLWFADNGERLGTYRGHNGAVWCCDVSR-DS 64
Query: 166 SILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDN 225
S L +GS D +++D +SG L T ++ P +V F+ G L V + D+
Sbjct: 65 SRLITGSADQTAKLWDVKSGKELFTFKFN---------APTRSVDFA-VGDRLAVITTDH 114
Query: 226 VVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGK-----------DPLVISGN 274
V + T V+ +E A+ L L P GK + ++SG
Sbjct: 115 FV---DRTAAIHVKRIAEDPEEQDAE----SVLVLHCPDGKKRINRAVWGPLNQTIVSGG 167
Query: 275 DSGSMCVWNVYSKNLVQKIDEK 296
+ + +W+ + L+++ DE+
Sbjct: 168 EDKVIRIWDAETGKLLKQSDEE 189
Score = 48.9 bits (115), Expect = 1e-05
Identities = 43/173 (24%), Positives = 72/173 (40%), Gaps = 10/173 (5%)
Query: 69 KECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRL----MGHTAPVISICYNNKGNI 124
K+ IN W P ++ I SG ED + I G++ + +GH + S+C +
Sbjct: 148 KKRINRAVWGPLNQTIVSGGEDKVIRIWDAETGKLLKQSDEEVGHKKDITSLCKAADDSH 207
Query: 125 LCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTES 184
+ S+D++ K W + + T LKT + P + +L G + D +
Sbjct: 208 FLTGSLDKTAKLWDMRTLTLLKTYTTVVPVNAVSLSPLLNHVVLGGGQDASAVTTTDHRA 267
Query: 185 GHCLKTLTYDKDWIAEDGVV-----PISTVKFSRNGKFLLVKSLDNVVKLWEY 232
G + YDK E G V PI+ + F+ +GK D V+L +
Sbjct: 268 GK-FEAKFYDKILQEEIGGVKGHFGPINALAFNPDGKSFSSGGEDGYVRLHHF 319
>At1g04510 [R] KOG0289 mRNA splicing factor
Length = 535
Score = 54.3 bits (129), Expect = 2e-07
Identities = 48/204 (23%), Positives = 95/204 (46%), Gaps = 17/204 (8%)
Query: 48 NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHII----YGRI 103
+T ++++ S +++ T H + + + + D+ + + S D TV I Y
Sbjct: 255 DTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSR 314
Query: 104 RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF 163
L H+A V ++ + S+S+D + + + SG L ++ S+ V+ F
Sbjct: 315 HTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVNYTAAAF 374
Query: 164 --DSSILSSGSYDGLIRIFDTES-GHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLV 220
D IL +G+ +++I+D +S + K ++ + I+++ FS NG FL
Sbjct: 375 HPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGE---------ITSISFSENGYFLAT 425
Query: 221 KSLDNVVKLWEYTRGTVVRTFLWP 244
+LD V+LW+ + RTF +P
Sbjct: 426 AALDG-VRLWDLRKLKNFRTFDFP 448
>SPBC577.09 [KL] KOG4283 Transcription-coupled repair protein CSA contains WD40
domain
Length = 404
Score = 53.9 bits (128), Expect = 3e-07
Identities = 57/248 (22%), Positives = 113/248 (44%), Gaps = 31/248 (12%)
Query: 66 TTHKECINCLCWSP-DSKCIASGSEDFTVEITHI-------IYGRIRRLMGHT-APVISI 116
T+HK I L W P D+ S S D T+++ + + + H +P+ S
Sbjct: 100 TSHKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIASH 159
Query: 117 CYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGL 176
C ++ ++ SI+ + SG+ ++S H+ V+++D + +L+SGS DG
Sbjct: 160 C------LIATAYRSSSIRLCDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGT 213
Query: 177 IRIFD----TESGHCL----KTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
R++D + S C+ K L ++ I+ G V + + ++ + ++L D+ ++
Sbjct: 214 CRLWDIRKVSSSFACMDLHNKYLPSNQTNISHYGTV--NGLAWTSDARYLASCGTDDRIR 271
Query: 229 LWEYTRGTVVRTFLWP--HQETKAKLKYNCGLELIYP-QGKDPLVISGNDSGSMCVWNVY 285
+W G P H +T + + C +I P D V+ ND GS+ + N+
Sbjct: 272 VWNMESGRNTLREFGPIIHNQTTSFAVHPC---MIQPSMDSDVFVLFPNDDGSLALLNLL 328
Query: 286 SKNLVQKI 293
+ V+++
Sbjct: 329 EGSFVRRL 336
>SPBC16A3.05c [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 352
Score = 53.9 bits (128), Expect = 3e-07
Identities = 42/155 (27%), Positives = 82/155 (52%), Gaps = 6/155 (3%)
Query: 60 KMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI-IYGRI--RRLMGHTAPVISI 116
K +++ ++ I+ L +SP ++ +A+ S D V I + G+ + L H PV+S+
Sbjct: 21 KDVEVAQPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQSIGKALYEHQGPVLSV 80
Query: 117 CYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF--DSSILSSGSYD 174
++ G + S S+D+S K + + +G + ++AH DAV + + S IL++GS+D
Sbjct: 81 NWSRDGTKVASGSVDKSAKVFDIQTGQN-QQVAAHDDAVRCVRFVEAMGTSPILATGSWD 139
Query: 175 GLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
++ +D + T++ + A D V P+ TV
Sbjct: 140 KTLKYWDLRQSTPIATVSLPERVYAMDCVHPLLTV 174
>Hs4506399 [A] KOG0647 mRNA export protein (contains WD40 repeats)
Length = 368
Score = 53.9 bits (128), Expect = 3e-07
Identities = 43/173 (24%), Positives = 88/173 (50%), Gaps = 10/173 (5%)
Query: 60 KMMKLTTTHKECINCLCWSPDS---KCIASGSEDFTV---EITHIIYGRIRRLMGHTAPV 113
K +++T++ + I CL +SP + + +GS V E+ + HT PV
Sbjct: 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPV 89
Query: 114 ISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSID-IPKFDSSILSSGS 172
+ +C+++ G+ + ++S D++ K W + S A++ ++ H V +I I + S + +GS
Sbjct: 90 LDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGS 148
Query: 173 YDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDN 225
+D ++ +DT S + + L + D + P++ V + G L+V L+N
Sbjct: 149 WDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERG--LIVYQLEN 199
>At1g48630 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 53.9 bits (128), Expect = 3e-07
Identities = 46/209 (22%), Positives = 106/209 (50%), Gaps = 17/209 (8%)
Query: 36 ISPDGEL-IAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVE 94
+S DG+ ++ + ++ ++++++ + + H + + + +S D++ I S S D T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 95 ITHIIYG---RIRRLMGHTAPVISICY--NNKGNILCSSSMDESIKEWHVLSGTALKTMS 149
+ + + I GH V + + N + S+S D+++K W++ + T++
Sbjct: 131 LWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLA 190
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
HS + ++ + D S+ +SG DG+I ++D G L +L E G + I ++
Sbjct: 191 GHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAEGKKLYSL--------EAGSI-IHSL 240
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
FS N ++ L + +N +++W+ +VV
Sbjct: 241 CFSPN-RYWLCAATENSIRIWDLESKSVV 268
Score = 53.1 bits (126), Expect = 5e-07
Identities = 42/175 (24%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 66 TTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNI 124
T H + + S D + SGS D + + + G RR +GHT V+S+ ++
Sbjct: 60 TGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQ 119
Query: 125 LCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSIL----SSGSYDGLIRIF 180
+ S+S D +IK W+ L G T+S + +F + L S S+D ++++
Sbjct: 120 IVSASRDRTIKLWNTL-GECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 181 DTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
+ ++ TL + ++TV S +G D V+ LW+ G
Sbjct: 179 NLQNCKLRNTLAGHSGY--------LNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
>Hs7705377 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 496
Score = 53.5 bits (127), Expect = 4e-07
Identities = 62/281 (22%), Positives = 118/281 (41%), Gaps = 35/281 (12%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSK 82
L G TS S G L+A+ + + +++ ++ K + + H + L W+ +
Sbjct: 225 LSVEGDSVTSVGWSERGNLVAVGTHKGFVQIWDAAAGKKLSMLEGHTARVGALAWNAEQ- 283
Query: 83 CIASGSEDFTV---EITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV 139
++SGS D + +I RRL GH V + ++ ++L S D + W+
Sbjct: 284 -LSSGSRDRMILQRDIRTPPLQSERRLQGHRQEVCGLKWSTDHHLLASGGNDNKLLVWNH 342
Query: 140 LSGTALKTMSAHSDAVVSIDIPKFDSSILSS--GSYDGLIRIFDTESGHCLKTLTYDKDW 197
S + ++ + H AV +I +L+S G+ D IR ++T +G L+ +
Sbjct: 343 SSLSPVQQYTEHLAAVKAIAWSPHQHGLLASGGGTADRCIRFWNTLTGQPLQCI------ 396
Query: 198 IAEDGVVPISTVKFSRNGKFLLVKS--LDNVVKLWEYTRGTVVRTFLWPHQETKAKL--- 252
D + + +S++ L+ N + +W+Y T V AKL
Sbjct: 397 ---DTGSQVCNLAWSKHANELVSTHGYSQNQILVWKYPSLTQV-----------AKLTGH 442
Query: 253 KYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKI 293
Y + P G+ +++G ++ WNV+SK K+
Sbjct: 443 SYRVLYLAMSPDGE--AIVTGAGDETLRFWNVFSKTRSTKV 481
>Hs5174447 [T] KOG0279 G protein beta subunit-like protein
Length = 317
Score = 53.5 bits (127), Expect = 4e-07
Identities = 47/173 (27%), Positives = 82/173 (47%), Gaps = 15/173 (8%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNILC 126
H ++ + S D + SGS D T+ + + G RR +GHT V+S+ +++ +
Sbjct: 62 HSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIV 121
Query: 127 SSSMDESIKEWHVLSGTALKTM--SAHSDAVVSIDI-PKFDSSILSSGSYDGLIRIFDTE 183
S S D++IK W+ L G T+ +HS+ V + P + I+ S +D L+++++
Sbjct: 122 SGSRDKTIKLWNTL-GVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNL- 179
Query: 184 SGHC-LKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
+C LKT + I G ++TV S +G D LW+ G
Sbjct: 180 -ANCKLKT-----NHIGHTGY--LNTVTVSPDGSLCASGGKDGQAMLWDLNEG 224
>Hs16445424 [Z] KOG0313 Microtubule binding protein YTM1 (contains WD40
repeats)
Length = 423
Score = 53.5 bits (127), Expect = 4e-07
Identities = 59/236 (25%), Positives = 95/236 (40%), Gaps = 58/236 (24%)
Query: 108 GHTAPVISICYNNKGNILCSSSMDESIKEWHV--------------------------LS 141
GH V SI + G CS S D+ +K W L+
Sbjct: 187 GHAGSVDSIAVDGSGTKFCSGSWDKMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLT 246
Query: 142 GTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAED 201
T + T+S H +AV S + D+ + S S+D IR++D SG TLT +K
Sbjct: 247 RTPIVTLSGHMEAVSS--VLWSDAEEICSASWDHTIRVWDVGSGSLKSTLTGNK------ 298
Query: 202 GVVPISTVKFSRNGKFLLVKSLDNVVKLWE--YTRGTVVRTFLWPHQETKAKLKYNCGLE 259
+ + +S K L S D ++LW+ G++V L H +K++
Sbjct: 299 ---VFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKWS---- 351
Query: 260 LIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATL 315
P + L+ SGS+ N+V+ D + +PL ++A DKV ++
Sbjct: 352 ---PTHEQQLI-----SGSL-------DNIVKLWDTRSCKAPLYDLAAHEDKVLSV 392
>CE06090 [T] KOG0279 G protein beta subunit-like protein
Length = 325
Score = 53.5 bits (127), Expect = 4e-07
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 24/165 (14%)
Query: 80 DSKCIASGSEDFTVEITHI----------IYGRIRRLMGHTAPVISICYNNKGNILCSSS 129
D + S S D T+ + + I +R L GH V + ++ G S S
Sbjct: 29 DKTTVLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHNHFVSDVVISSDGQFALSGS 88
Query: 130 MDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLK 189
D++++ W + G + + +H+ V+S+ D+ + SGS D I++++T C
Sbjct: 89 WDKTLRLWDLNQGVSTRQFISHTKDVLSVAF-SADNRQIVSGSRDKSIKLWNT-LAQCKY 146
Query: 190 TLTYD--KDWIAEDGVVPISTVKFSRNGKFLLVKSL--DNVVKLW 230
T+T D DW +STV+FS + + ++ S D VVK+W
Sbjct: 147 TITDDCHTDW--------VSTVRFSPSNRDPVIVSAGWDKVVKVW 183
>CE01695 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 702
Score = 53.5 bits (127), Expect = 4e-07
Identities = 58/265 (21%), Positives = 118/265 (43%), Gaps = 31/265 (11%)
Query: 32 TSCQISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSED 90
TS Q G+L+A+ + + ++++++ K + T H + CL W+ D+ C SGS D
Sbjct: 442 TSVQWCDKGDLLAVGTSRGVTQIWDVTTQKKTRELTGHSSRVGCLAWNADTIC--SGSRD 499
Query: 91 FTV---EITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKT 147
T+ +I R+L H V + ++ +L S D + W++ ++T
Sbjct: 500 RTIMHRDIRCDDNDMGRKLTNHRQEVCGLKWSPDKQLLASGGNDNQLLVWNLRRNEPIQT 559
Query: 148 MSAHSDAVVSIDIPKFDSSILSS--GSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP 205
+ H+ AV ++ +L S G+ D +R ++T + ++ + D
Sbjct: 560 YTQHNAAVKALAWSPHHHGLLVSGGGTADRCLRFWNTLTAQPMQCV---------DTGSQ 610
Query: 206 ISTVKFSRNGKFLLVK---SLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIY 262
+ V +S++ L+ S ++V+ +W+Y V T L HQ Y +
Sbjct: 611 VCNVAWSKHSSELVSTHGYSFNHVI-IWKYPSLQPV-TKLVGHQ-------YRVLYLAMS 661
Query: 263 PQGKDPLVISGNDSGSMCVWNVYSK 287
P G+ +++G ++ W+V++K
Sbjct: 662 PDGES--IVTGAGDETLRFWHVFNK 684
>At1g18080 [T] KOG0279 G protein beta subunit-like protein
Length = 327
Score = 53.5 bits (127), Expect = 4e-07
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 15/176 (8%)
Query: 66 TTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNI 124
T H + + S D + SGS D + + + G RR +GHT V+S+ ++
Sbjct: 60 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQ 119
Query: 125 LCSSSMDESIKEWHVLSGTALKTMS----AHSDAVVSIDI-PKFDSSILSSGSYDGLIRI 179
+ S+S D +IK W+ L G T+S H D V + P + S S+D +++
Sbjct: 120 IVSASRDRTIKLWNTL-GECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 178
Query: 180 FDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
++ + TL ++ STV S +G D VV LW+ G
Sbjct: 179 WNLSNCKLRSTLAGHTGYV--------STVAVSPDGSLCASGGKDGVVLLWDLAEG 226
>SPAC31A2.14 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 962
Score = 53.1 bits (126), Expect = 5e-07
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 31/159 (19%)
Query: 56 ISSSKMMKLTTTHKECINCLCWSPDSKCIASG---SEDFTVEITHIIY--GRIRRLMG-- 108
+S K K+T C + L D+ C+ G SE + +T +Y GR +L G
Sbjct: 1 MSVRKRYKVTYVLDSCNDQLGHRLDANCLVLGRYFSEQGSAPVTRALYSGGRDGQLFGWD 60
Query: 109 -----------------HTAPV--ISICYNNKGNILCSSSMDESIKEW--HVLSGTALKT 147
H+A V I++ ++++G I CSS D ++K W HVL+ + L T
Sbjct: 61 IGYDYGKASQPLAKIQAHSAWVNDIALTHDSEGVISCSS--DSTVKLWKPHVLNASCLST 118
Query: 148 MSAHSDAVVSIDIPKFDSS-ILSSGSYDGLIRIFDTESG 185
+ H+D V + IPK+ S +++SG D I ++D G
Sbjct: 119 IGEHTDYVKRVSIPKYSKSPLVASGGLDKRIIVWDYNVG 157
>Hs4503513 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 325
Score = 53.1 bits (126), Expect = 5e-07
Identities = 53/224 (23%), Positives = 93/224 (40%), Gaps = 19/224 (8%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GH + I YN +G++L + + D + W+ ++G L T H+ AV +D +D+
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVD-ADWDT 64
Query: 166 SILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDN 225
+ +GS D R++D E+G L L + + T F G ++ S D
Sbjct: 65 KHVLTGSADNSCRLWDCETGKQLALLKTNS---------AVRTCGFDFGGNIIMF-STDK 114
Query: 226 VVKLWEYTRGTVVRTFLWPHQ--ETKAKLKYNCGLELIYPQGKDPL---VISGNDSGSMC 280
+ + +R P Q + +K C I PL +I+G++SG +
Sbjct: 115 QMGYQCFVSFFDLRD---PSQIDNNEPYMKIPCNDSKITSAVWGPLGECIIAGHESGELN 171
Query: 281 VWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGECNLF 324
++ S ++ + E R I +S T S + LF
Sbjct: 172 QYSAKSGEVLVNVKEHSRQINDIQLSRDMTMFVTASKDNTAKLF 215
>Hs20143912 [R] KOG0266 WD40 repeat-containing protein
Length = 275
Score = 53.1 bits (126), Expect = 5e-07
Identities = 45/186 (24%), Positives = 83/186 (44%), Gaps = 9/186 (4%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCI-ASGSEDFTVEITHIIY--GRIRRLMGH 109
V E K++ H E + L ++PD I S S D T+ + + ++ L GH
Sbjct: 8 VNEKEIGKLLLNLVDHTEVVRDLTFAPDGSLILVSASRDKTLRVWDLKDDGNMMKVLRGH 67
Query: 110 TAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILS 169
V S ++ ++LCS +++ W++ T ++ + H VV+ D D ++L+
Sbjct: 68 QNWVYSCAFSPDSSMLCSVGASKAVFLWNMDKYTMIRKLEGHHHDVVACDFSP-DGALLA 126
Query: 170 SGSYDGLIRIFDTESGHCLKTLTY---DKDWIAEDGVVP--ISTVKFSRNGKFLLVKSLD 224
+ SYD + I+D +G L + I G + +V FS +G + + D
Sbjct: 127 TASYDTRVYIWDPHNGDILMEFGHLFPPPTPIFAGGANDRWVRSVSFSHDGLHVASLADD 186
Query: 225 NVVKLW 230
+V+ W
Sbjct: 187 KMVRFW 192
>CE02186 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 53.1 bits (126), Expect = 5e-07
Identities = 50/219 (22%), Positives = 91/219 (40%), Gaps = 18/219 (8%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDML--VYEISSS----KMMKLTTTHKECINCLCW 77
+P +C +P G +A C D + +Y + + ++ + H ++C C
Sbjct: 93 IPLRSSWVMTCAYAPSGSFVA-CGGLDNICSIYSLKTREGNVRVSRELPGHTGYLSC-CR 150
Query: 78 SPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKE 136
D I + S D T + I G+ GHT V+S+ + S + D S K
Sbjct: 151 FLDDNQIVTSSGDMTCALWDIETGQQCTAFTGHTGDVMSLSLSPDFRTFISGACDASAKL 210
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDS-SILSSGSYDGLIRIFDTESGHCLKTLTYDK 195
W + G +T H + ++ F S + ++GS D R+FD + L ++D
Sbjct: 211 WDIRDGMCKQTFPGHESDINAVAF--FPSGNAFATGSDDATCRLFDIRADQELAMYSHD- 267
Query: 196 DWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTR 234
+ + I++V FS++G+ L D +W+ R
Sbjct: 268 -----NIICGITSVAFSKSGRLLFAGYDDFNCNVWDSMR 301
>7300806 [S] KOG0282 mRNA splicing factor
Length = 576
Score = 53.1 bits (126), Expect = 5e-07
Identities = 43/170 (25%), Positives = 75/170 (43%), Gaps = 14/170 (8%)
Query: 68 HKECINCLCWSPDSK-CIASGSEDFTVEITHIIYGR---IRRLMGHTAPVISICYNNKGN 123
H + I+ + W P + + SGS D V++ + YG IR GH + I +NN+G
Sbjct: 284 HNKGISSIRWFPKTAHLLLSGSMDCRVKLWEV-YGERRCIRTFSGHRQAIKDIAWNNRGT 342
Query: 124 ILCSSSMDESIKEWHVLSGTALKTMSAHS-DAVVSIDIPKFDSSILSSGSYDGLIRIFDT 182
S+S D IK W +G + + V + +G+ D I +DT
Sbjct: 343 NFLSASYDRYIKLWDAETGDVVSRFTTRKMPFCVKFHPDNSKQHLFVAGTSDKKIICWDT 402
Query: 183 ESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEY 232
SG ++ YD+ + +ST+ F + + + S D +++WE+
Sbjct: 403 RSGDIVQ--EYDRH------LGSVSTITFVDDNRRFVTTSDDKSMRIWEW 444
>SPBC887.04c [I] KOG0301 Phospholipase A2-activating protein (contains WD40
repeats)
Length = 713
Score = 52.8 bits (125), Expect = 7e-07
Identities = 41/145 (28%), Positives = 68/145 (46%), Gaps = 8/145 (5%)
Query: 40 GELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHII 99
GE I I + D L+ + K++K H +C+ LC P AS S D +++
Sbjct: 147 GEDIFITGSADKLIKIWNGEKLVKSILAHNDCVRSLCQIPGG--FASCSNDGVIKLWTSD 204
Query: 100 YGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSI- 158
+ L GHT+ V S+ Y + ++ S D +I+ W L+ ++ + +V S+
Sbjct: 205 GEFLYELHGHTSFVYSLTYIHNQQLIASCGEDRTIRIWK--GKECLQCITLPTTSVWSVS 262
Query: 159 DIPKFDSSILSSGSYDGLIRIFDTE 183
+P D L GS DG +RIF +
Sbjct: 263 SLPNGD---LVCGSSDGFVRIFTVD 284
>Hs4826956 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 919
Score = 52.8 bits (125), Expect = 7e-07
Identities = 50/212 (23%), Positives = 93/212 (43%), Gaps = 12/212 (5%)
Query: 24 LPASGKISTSCQISPDGELIAI-CQNT-DMLVYEISSSKMMKLTTTHKECINCLCWSPDS 81
L S + S I+ G+ IA C +LV+E S + H + L +SPD
Sbjct: 326 LSISDQSIASVAINSSGDWIAFGCSGLGQLLVWEWQSESYVLKQQGHFNSMVALAYSPDG 385
Query: 82 KCIASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVL 140
+ I +G +D V++ + + G H++ V + + G ++ +SSMD +++ + +
Sbjct: 386 QYIVTGGDDGKVKVWNTLSGFCFVTFTEHSSGVTGVTFTATGYVVVTSSMDGTVRAFDLH 445
Query: 141 SGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGL-IRIFDTESGHCLKTLTYDKDWIA 199
+T ++ S I+S+G+ D I ++ ++G L L+
Sbjct: 446 RYRNFRTFTSPRPTQFSCVAVDASGEIVSAGAQDSFEIFVWSMQTGRLLDVLS------G 499
Query: 200 EDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
+G PIS + F+ L S D V+LW+
Sbjct: 500 HEG--PISGLCFNPMKSVLASASWDKTVRLWD 529
>Hs19923529 [A] KOG0284 Polyadenylation factor I complex subunit PFS2
Length = 1336
Score = 52.8 bits (125), Expect = 7e-07
Identities = 38/131 (29%), Positives = 65/131 (49%), Gaps = 4/131 (3%)
Query: 54 YEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM-GHTAP 112
Y S+ +K+ HKE I +SP A+ S+D TV I + R++ GH A
Sbjct: 187 YWQSNMNNVKMFQAHKEAIREASFSPTDNKFATCSDDGTVRIWDFLRCHEERILRGHGAD 246
Query: 113 VISICYNNKGNILCSSSMD--ESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSS 170
V + ++ ++ S S D + IK W +G +L T+ AH + V+ + + + + L +
Sbjct: 247 VKCVDWHPTKGLVVSGSKDSQQPIKFWDPKTGQSLATLHAHKNTVMEVKL-NLNGNWLLT 305
Query: 171 GSYDGLIRIFD 181
S D L ++FD
Sbjct: 306 ASRDHLCKLFD 316
>CE25232 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 547
Score = 52.8 bits (125), Expect = 7e-07
Identities = 62/294 (21%), Positives = 123/294 (41%), Gaps = 36/294 (12%)
Query: 30 ISTSCQISPDGEL-IAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGS 88
+ +S +ISP +A + + +Y+ + + L + K+ + + + D + +A G
Sbjct: 28 VVSSVRISPKKPYHVATTSSVRLTLYDTVVCEPLNLFSRFKKGVCSIDFRHDGRLLAIGG 87
Query: 89 EDFTVEI------THIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV--- 139
++ V I T +R + + V S+ ++ +G+ + S + D IK++ V
Sbjct: 88 DEGKVRIFDVEKTTGSSKVALRVMQASQSTVKSVHFSPRGDTVFSMADDGKIKQYRVADT 147
Query: 140 ---LSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
++ + + AH DA+ + + I+ +G YD +R++D S K+L D +
Sbjct: 148 AYGVNAVPIIEIQAHEDAIRCGAVSSINDHIVLTGGYDHKVRLWDIRSKE--KSLELDCE 205
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNC 256
P+ +V F G+ L+ + +VK+W+ T G + T L H +T L+
Sbjct: 206 H-------PVESVLF-LPGEQLIATAAGPIVKIWDTTTGRQL-TALQAHYKTVTSLRLAT 256
Query: 257 GLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYD 310
+ G D V N + I+ SP++ I S D
Sbjct: 257 NSTCLLSAGIDRRV------------NAFRTTNYSLINSWSMPSPVLDIDVSRD 298
>At5g66240 [ABO] KOG1446 Histone H3 (Lys4) methyltransferase complex and RNA
cleavage factor II complex subunit SWD2
Length = 328
Score = 52.8 bits (125), Expect = 7e-07
Identities = 49/253 (19%), Positives = 106/253 (41%), Gaps = 27/253 (10%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSE---DFTVEITHI 98
++ + + +Y+++S+ +K + K ++ +C++ + S D ++ + +
Sbjct: 45 MVTASDDDSIRLYDVASATCLKTINSKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSL 104
Query: 99 IYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVS 157
+ +R GH V+S+ + G S S+D ++ W + +
Sbjct: 105 HDNKYLRYFKGHHDRVVSLSLCSGGECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAA 164
Query: 158 IDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD----WIAEDGVVPISTVKFSR 213
D D ++ + ++ G IR+FD Y+K + + + VKFS
Sbjct: 165 YD----DQGLIFAIAFGGYIRMFDARM--------YEKGPFEIFSVGGDLSEANVVKFSN 212
Query: 214 NGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISG 273
+G+ +L+ ++D + + + RGT++ TF ++ L P+G V+SG
Sbjct: 213 DGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLD-----AAFSPEGM--FVVSG 265
Query: 274 NDSGSMCVWNVYS 286
+ GS W V S
Sbjct: 266 SGDGSTHAWGVRS 278
>At3g49180 [R] KOG0646 WD40 repeat protein
Length = 438
Score = 52.8 bits (125), Expect = 7e-07
Identities = 34/142 (23%), Positives = 64/142 (44%), Gaps = 14/142 (9%)
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
P+ ++ NN+G L + I W V +G LK H +V + + D S+L SG
Sbjct: 80 PIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCL-VFSGDDSLLVSG 138
Query: 172 SYDGLIRI---------FDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKS 222
S DG IR+ F + G+ L +++ ++ +V + + ++ S
Sbjct: 139 SQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSVTDIV----IDYGGCNAVIISSS 194
Query: 223 LDNVVKLWEYTRGTVVRTFLWP 244
D K+W +RG +++ ++P
Sbjct: 195 EDRTCKVWSLSRGKLLKNIIFP 216
Score = 51.6 bits (122), Expect = 2e-06
Identities = 52/209 (24%), Positives = 93/209 (43%), Gaps = 23/209 (11%)
Query: 50 DMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHII--YGRIRRLM 107
D+ ++E+++ K++K H + CL +S D + SGS+D ++ + +I + +R
Sbjct: 101 DIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQ 160
Query: 108 G----------HTAPV--ISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAV 155
G HT V I I Y ++ SSS D + K W + G LK + S V
Sbjct: 161 GNTLYEHNFNEHTMSVTDIVIDYGGCNAVIISSSEDRTCKVWSLSRGKLLKNIIFPS--V 218
Query: 156 VSIDIPKFDSSILSSGSYDGLIRI--FDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSR 213
++ + +G+ D I I + S + + L ++E G I+ + +
Sbjct: 219 INALALDPGGCVFYAGARDSKIYIGAINATSEYGTQVL----GSVSEKGKA-ITCLAYCA 273
Query: 214 NGKFLLVKSLDNVVKLWEYTRGTVVRTFL 242
+G L+ S D VV +W+ VRT +
Sbjct: 274 DGNLLISGSEDGVVCVWDPKSLRHVRTLI 302
>7299015 [S] KOG1407 WD40 repeat protein
Length = 320
Score = 52.8 bits (125), Expect = 7e-07
Identities = 42/180 (23%), Positives = 83/180 (45%), Gaps = 16/180 (8%)
Query: 53 VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAP 112
+++I K + +T T E IN + WSPD K IA G+++ + +IR +
Sbjct: 99 IWDIRVGKCVSVTNTKGENIN-IAWSPDGKTIAVGNKEDLITFIDTRTNKIRVEEPFSFE 157
Query: 113 VISICYNNKGNILCSSSMDESIKEWHVLSGTALK---TMSAHSDAVVSIDIPKFDSSILS 169
V I +NN ++ + + H+LS +L+ T+ AH + I+ +
Sbjct: 158 VNEISWNNTNDLF---FLTNGLGCMHILSYPSLEHQMTLKAHPANCICIEFGP-TGKYFA 213
Query: 170 SGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKL 229
+GS D + ++D CL+ ++ +W P+ T+ FS + + + + S D ++ +
Sbjct: 214 TGSADAQVSLWDANELACLRMIS-RLEW-------PVRTISFSHDERMIALASEDLIIDI 265
Score = 49.3 bits (116), Expect = 8e-06
Identities = 34/139 (24%), Positives = 67/139 (47%), Gaps = 7/139 (5%)
Query: 50 DMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRR---L 106
D+ Y S SK+ + +H ++ +CW+ D + +ASGS D TV + + R +
Sbjct: 10 DLKSYLRSHSKIRE-QRSHMSKVHSVCWNADGRYLASGSFDKTVVVYSLERDRFLKGNTY 68
Query: 107 MGHTAPVISICYNNKG-NILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
GHTA V +C++ + ++S D++++ W + G + + + + P D
Sbjct: 69 RGHTASVDQLCWHRTNPDQFATASGDKTVRIWDIRVGKCVSVTNTKGENINIAWSP--DG 126
Query: 166 SILSSGSYDGLIRIFDTES 184
++ G+ + LI DT +
Sbjct: 127 KTIAVGNKEDLITFIDTRT 145
>7293146 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 52.8 bits (125), Expect = 7e-07
Identities = 46/215 (21%), Positives = 91/215 (41%), Gaps = 16/215 (7%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDML--VYEISSS----KMMKLTTTHKECINCLCW 77
+P +C +P G +A C D + +Y + + ++ + H ++C C
Sbjct: 93 IPLRSSWVMTCAYAPSGSYVA-CGGLDNMCSIYNLKTREGNVRVSRELPGHGGYLSC-CR 150
Query: 78 SPDSKCIASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKE 136
D I + S D + + I G ++ +GHT V+++ + S + D S K
Sbjct: 151 FLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQCKTFVSGACDASAKL 210
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
W + G +T H + ++ + ++GS D R+FD + L ++D
Sbjct: 211 WDIREGVCKQTFPGHESDINAVTFFP-NGQAFATGSDDATCRLFDIRADQELAMYSHD-- 267
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
+ + I++V FS++G+ LL D +W+
Sbjct: 268 ----NIICGITSVAFSKSGRLLLAGYDDFNCNVWD 298
>YLR222c [A] KOG0319 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 817
Score = 52.4 bits (124), Expect = 9e-07
Identities = 57/260 (21%), Positives = 121/260 (45%), Gaps = 13/260 (5%)
Query: 31 STSCQISPDGELIAICQNTDMLVYEIS--SSKMM-KLTTTHKECINCLCWSPDSKCIASG 87
S +S +G+++A ++ + +++ S K++ K++ ++ I L +PD + +
Sbjct: 20 SAVATVSENGKILATPVLDEINIIDLTPGSRKILHKISNEDEQEITALKLTPDGQYLTYV 79
Query: 88 SEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKT 147
S+ ++I H+ G++ R M ++P + ++ +L D SI + +G +
Sbjct: 80 SQAQLLKIFHLKTGKVVRSMKISSPSYILDADSTSTLLAVGGTDGSIIVVDIENGYITHS 139
Query: 148 MSAHSDAVVSIDI-PKFDSSI--LSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVV 204
H + S+ + +S I L+SG +G+++++D CL TL + A G+
Sbjct: 140 FKGHGGTISSLKFYGQLNSKIWLLASGDTNGMVKVWDLVKRKCLHTL--QEHTSAVRGLD 197
Query: 205 PISTVKFSRNGKFLLVKSLDNVVKLWEYT---RGTVVRTFLWPHQ-ETKAKLKYNCGLEL 260
I LL D+++ LW++ + +++T Q E+ LK G +
Sbjct: 198 IIEVPDNDEPSLNLLSGGRDDIINLWDFNMKKKCKLLKTLPVNQQVESCGFLKDGDGKRI 257
Query: 261 IYPQGKDPLV-ISGNDSGSM 279
IY G D + + ++SGS+
Sbjct: 258 IYTAGGDAIFQLIDSESGSV 277
Score = 49.3 bits (116), Expect = 8e-06
Identities = 46/208 (22%), Positives = 89/208 (42%), Gaps = 4/208 (1%)
Query: 26 ASGKISTSCQISPDGELIAICQ-NTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCI 84
A K + +SP+ + A + ++ + + ++ HK + + + K +
Sbjct: 489 AHEKDINALSVSPNDSIFATASYDKTCKIWNLENGELEATLANHKRGLWDVSFCQYDKLL 548
Query: 85 ASGSEDFTVEITHI-IYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT 143
A+ S D TV+I + + ++ L GHT V + NK L S D IK W SG
Sbjct: 549 ATSSGDKTVKIWSLDTFSVMKTLEGHTNAVQRCSFINKQKQLISCGADGLIKIWDCSSGE 608
Query: 144 ALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF-DTESGHCLKTLTYDKDWIAEDG 202
LKT+ H++ + ++ D ++ S DG+ + + D + K + ++
Sbjct: 609 CLKTLDGHNNRLWALSTMN-DGDMIVSADADGVFQFWKDCTEQEIEEEQEKAKLQVEQEQ 667
Query: 203 VVPISTVKFSRNGKFLLVKSLDNVVKLW 230
+ K FLL +LD+ ++L+
Sbjct: 668 SLQNYMSKGDWTNAFLLAMTLDHPMRLF 695
>YDR267c [R] KOG0645 WD40 repeat protein
Length = 330
Score = 52.4 bits (124), Expect = 9e-07
Identities = 47/185 (25%), Positives = 74/185 (39%), Gaps = 29/185 (15%)
Query: 66 TTHKECINCLCWSPDSKCIASGSEDFTVEI--------THIIYGRIRRLMGHTAPVISIC 117
T HK+ I + W P + +A+GS D TV I + + GH V +
Sbjct: 55 TAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVA 114
Query: 118 YNNKGNILCSSSMDESIKEWHVLSG----TALKTMSAHSDAVVSIDIPKFDSSILSSGSY 173
++N G L + S D+S+ W + + HS V + I ++L+S SY
Sbjct: 115 WSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV-IWHPSEALLASSSY 173
Query: 174 DGLIRIFDTESGHCLKTLTYDKDW------IAEDGVVPISTVKFSRNGKFLLVKSLDNVV 227
D +RI+ YD DW +G V S + L S D+ V
Sbjct: 174 DDTVRIWK----------DYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTV 223
Query: 228 KLWEY 232
++W+Y
Sbjct: 224 RVWKY 228
>HsM8923075 [R] KOG0266 WD40 repeat-containing protein
Length = 504
Score = 52.4 bits (124), Expect = 9e-07
Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 30/283 (10%)
Query: 42 LIAICQNTD---MLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI--T 96
L A C + D +++YEI S + M+ H I L WS D I + S D T I
Sbjct: 75 LAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKN 134
Query: 97 HIIYGRIRRLMGHTAPVISICYNNK-GNILCSSSMDESIKEWHVL----SGTALKTMSAH 151
I R++ H + V + ++ ++ + D I+ W V S ++ H
Sbjct: 135 EINNTNTFRVLSHPSFVYTAKFHPAVRELVVTGCYDSMIRIWKVEMREDSAILVRQFDVH 194
Query: 152 SDAVVSIDIPKFDSSILSSGSYDGLIRIFDT-----ESGHCLKTLTYDKD-WIAEDGVVP 205
+ S+ + + SG G+I +++T + H + T +K+ E +P
Sbjct: 195 KSFINSLCFDT-EGHHMYSGDCTGVIVVWNTYVKINDLEHSVHHWTINKEIKETEFKGIP 253
Query: 206 ISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWP--HQETKAKLKYNCGLELIYP 263
IS ++ NGK LL+ + D+ +++ + R V R F+ ++E CG
Sbjct: 254 ISYLEIHPNGKRLLIHTKDSTLRIMD-LRILVARKFVGAANYREKIHSTLTPCG------ 306
Query: 264 QGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISIS 306
+ +G++ G + VWN + V + SP+ IS
Sbjct: 307 ----TFLFAGSEDGIVYVWNPETGEQVAMYSDLPFKSPIRDIS 345
>At5g25150 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 700
Score = 52.4 bits (124), Expect = 9e-07
Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 22/179 (12%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L+GH+ PV S ++ G+ + SSS D +I+ W L H+ V F
Sbjct: 414 LLGHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPF-G 472
Query: 166 SILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDN 225
+S S+D RI+ + L+ + +S V + N ++ S D
Sbjct: 473 HYFASCSHDRTARIWSMDRIQPLRIMAGH-----------LSDVDWHPNCNYIATGSSDK 521
Query: 226 VVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNV 284
V+LW+ G VR F+ H+ L + P G+ + SG++ G++ +W++
Sbjct: 522 TVRLWDVQTGECVRIFI-GHRSMVLSLAMS-------PDGR--YMASGDEDGTIMMWDL 570
Score = 49.3 bits (116), Expect = 8e-06
Identities = 30/126 (23%), Positives = 58/126 (45%), Gaps = 5/126 (3%)
Query: 35 QISPDGELIAICQNTDML-VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV 93
Q SP G A C + ++ + + +++ H ++ W P+ IA+GS D TV
Sbjct: 467 QFSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVD---WHPNCNYIATGSSDKTV 523
Query: 94 EITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+ + G +R +GH + V+S+ + G + S D +I W + + + + H+
Sbjct: 524 RLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGHN 583
Query: 153 DAVVSI 158
V S+
Sbjct: 584 SCVWSL 589
>At3g44530 [DK] KOG0973 Histone transcription regulator HIRA WD repeat
superfamily
Length = 1051
Score = 52.4 bits (124), Expect = 9e-07
Identities = 44/190 (23%), Positives = 81/190 (42%), Gaps = 32/190 (16%)
Query: 33 SCQISPDGELIAIC----QNTDMLVYEISSSKMMKLTTT-HKECINCLCWSPDSKCIASG 87
S + P+GE A ++ D + I + + + T H +NC+ W+ +S+ +ASG
Sbjct: 18 SIDVQPNGERFATGGGDHKSVDKDLQNIDTKERLLATLRDHFGSVNCVRWAKNSRYVASG 77
Query: 88 SEDFTVEITHIIYGR------------------IRRLMGHTAPVISICYNNKGNILCSSS 129
S+D ++I G + L GHTA V+ + ++ ++L S S
Sbjct: 78 SDDQVIQIHERKPGSGTTEFGSGEAPDVENWKAVMTLRGHTADVVDLNWSPDDSMLASGS 137
Query: 130 MDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTE------ 183
+D ++ W++ +G + H V + S ++S S D + I+ T
Sbjct: 138 LDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWDPI-GSFIASQSDDKTVIIWRTSDWGMAH 196
Query: 184 --SGHCLKTL 191
GH K+L
Sbjct: 197 RTDGHWAKSL 206
>At1g15440 [A] KOG0291 WD40-repeat-containing subunit of the 18S rRNA
processing complex
Length = 900
Score = 52.4 bits (124), Expect = 9e-07
Identities = 47/236 (19%), Positives = 97/236 (40%), Gaps = 56/236 (23%)
Query: 51 MLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYG--------- 101
+LV++ + + H +NC+ +SPDS+ +A+G++D V++ +++ G
Sbjct: 371 LLVWDWRTETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEH 430
Query: 102 -------------------------------RIRRLMGHTAPV----ISICYNNKGNILC 126
R + +T P +S+ + G+++C
Sbjct: 431 TNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLTADPSGDVVC 490
Query: 127 SSSMDE-SIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDT-ES 184
+ ++D I W +G +S H V + + +L+S S+D +R++D S
Sbjct: 491 AGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPL-TQLLASSSWDYTVRLWDVFAS 549
Query: 185 GHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRT 240
++T ++ D + TV F +GK L +LD + W+ G ++ T
Sbjct: 550 KGTVETFRHNHD---------VLTVAFRPDGKQLASSTLDGQINFWDTIEGVLMYT 596
Score = 50.4 bits (119), Expect = 3e-06
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 103 IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPK 162
I + GH V + Y+ +L + + D +K W+V+SGT T + H++AV ++
Sbjct: 382 ILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMA 441
Query: 163 FDSSILSSGSYDGLIRIFDTESGHCLKTLT 192
+ S+LS+ S DG +R +D + KT T
Sbjct: 442 DNHSLLSA-SLDGTVRAWDFKRYKNYKTYT 470
>7296910 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 326
Score = 52.4 bits (124), Expect = 9e-07
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 16/183 (8%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GH + I YN +G++L S S D+ W+ L+G L T H AV +D+ ++S
Sbjct: 6 LQGHERSITQIKYNREGDLLFSCSKDQKPNVWYSLNGERLGTYDGHQGAVWCLDV-DWES 64
Query: 166 SILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRN-GKFLLVKSLD 224
L +G+ D +I+D E G + + I V S FS N + K++
Sbjct: 65 RKLITGAGDMTAKIWDVEYGTVIAS-------IPTKSSVRTSNFSFSGNQAAYSTDKAMG 117
Query: 225 NVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPL---VISGNDSGSMCV 281
+L+ VR E + L+ I PL +I+G+D+G++ +
Sbjct: 118 QSCELFLID----VRNADSSLSEQEPTLRIPMTESKITSMLWGPLDETIITGHDNGNIAI 173
Query: 282 WNV 284
W++
Sbjct: 174 WDI 176
>Hs5729852 [R] KOG0286 G-protein beta subunit
Length = 353
Score = 52.0 bits (123), Expect = 1e-06
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 52 LVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI-------IYGRIR 104
+V+++ S + ++ TH+ IN + + P ASGS+D T + + IY +
Sbjct: 222 MVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES 281
Query: 105 RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFD 164
+ G + S+ ++ G +L + D +I W VL G+ + + H + V ++ + D
Sbjct: 282 IIFGAS----SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP-D 336
Query: 165 SSILSSGSYDGLIRIF 180
+ SGS+D +R++
Sbjct: 337 GTAFCSGSWDHTLRVW 352
>Hs20336270 [R] KOG0286 G-protein beta subunit
Length = 395
Score = 52.0 bits (123), Expect = 1e-06
Identities = 33/136 (24%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 52 LVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHI-------IYGRIR 104
+V+++ S + ++ TH+ IN + + P ASGS+D T + + IY +
Sbjct: 264 MVWDMRSGQCVQAFETHESDINSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKES 323
Query: 105 RLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFD 164
+ G + S+ ++ G +L + D +I W VL G+ + + H + V ++ + D
Sbjct: 324 IIFGAS----SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSP-D 378
Query: 165 SSILSSGSYDGLIRIF 180
+ SGS+D +R++
Sbjct: 379 GTAFCSGSWDHTLRVW 394
>7294830 [K] KOG0263 Transcription initiation factor TFIID subunit TAF5
(also component of histone acetyltransferase SAGA)
Length = 942
Score = 52.0 bits (123), Expect = 1e-06
Identities = 48/224 (21%), Positives = 84/224 (37%), Gaps = 29/224 (12%)
Query: 104 RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKF 163
R L GH PV +N + L + S D S++ W +LS + + S H V +
Sbjct: 620 RTLYGHQGPVYGCSFNPEDRFLITCSEDFSVRLWCLLSWSCVVIFSGHLAPVCFV----- 674
Query: 164 DSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDW----IAEDGVVPISTVKFSRNGKFLL 219
+ + Y F T S C + + I + + + F N ++
Sbjct: 675 ---VFAPRGY-----YFATASDDCTARVWMQDNTKPARILQGHLAELGVCLFHPNRHYMA 726
Query: 220 VKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSM 279
S D V++W+ + VR F A + CG L +SG D +
Sbjct: 727 TGSADCTVRIWDIVKAVQVRIFRGHKSRITALIYSICGRYL----------VSGGDDNLI 776
Query: 280 CVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGECNL 323
+W+ ++ L+Q D H + + ++ S D + +C L
Sbjct: 777 MIWDTANEILMQFFD--HHKASINTMEISLDNNILVVGGQDCQL 818
>Hs5902134 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 461
Score = 51.6 bits (122), Expect = 2e-06
Identities = 48/179 (26%), Positives = 82/179 (44%), Gaps = 19/179 (10%)
Query: 83 CIASGSEDFTVEITHIIYGRIRR----LMGHTAPVISICY-NNKGNILCSSSMDESIKEW 137
C ASG F V + GR+ + + GHTAPV+ I + + N++ S S D ++ W
Sbjct: 51 CEASGGGAFLV-LPLGKTGRVDKNAPTVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVW 109
Query: 138 HVLSGTALK-------TMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKT 190
+ G + T+ H+ V + ++L S D +I ++D +G + T
Sbjct: 110 EIPDGGLMLPLREPVVTLEGHTKRVGIVAWHTTAQNVLLSAGCDNVIMVWDVGTGAAMLT 169
Query: 191 LTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETK 249
L + + D I +V +SR+G + D V++ E +GTVV PH+ T+
Sbjct: 170 LGPE---VHPD---TIYSVDWSRDGGLICTSCRDKRVRIIEPRKGTVVAEKDRPHEGTR 222
>Hs21361641 [R] KOG0266 WD40 repeat-containing protein
Length = 1196
Score = 51.6 bits (122), Expect = 2e-06
Identities = 66/283 (23%), Positives = 118/283 (41%), Gaps = 30/283 (10%)
Query: 42 LIAICQNTD---MLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI--T 96
L A C + D +++YEI S + M+ H I L WS D I + S D T I
Sbjct: 624 LAAACASRDGYPIILYEIPSGRFMRELCGHLNIIYDLSWSKDDHYILTSSSDGTARIWKN 683
Query: 97 HIIYGRIRRLMGHTAPVISICYNNK-GNILCSSSMDESIKEWHVL----SGTALKTMSAH 151
I R++ H + V + ++ ++ + D I+ W V S ++ H
Sbjct: 684 EINNTNTFRVLPHPSFVYTAKFHPAVRELVVTGCYDSMIRIWKVEMREDSAILVRQFDVH 743
Query: 152 SDAVVSIDIPKFDSSILSSGSYDGLIRIFDT-----ESGHCLKTLTYDKD-WIAEDGVVP 205
+ S+ + + SG G+I +++T + H + T +K+ E +P
Sbjct: 744 KSFINSLCFDT-EGHHMYSGDCTGVIVVWNTYVKINDLEHSVHHWTINKEIKETEFKGIP 802
Query: 206 ISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWP--HQETKAKLKYNCGLELIYP 263
IS ++ NGK LL+ + D+ +++ + R V R F+ ++E CG
Sbjct: 803 ISYLEIHPNGKRLLIHTKDSTLRIMD-LRILVARKFVGAANYREKIHSTLTPCG------ 855
Query: 264 QGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISIS 306
+ +G++ G + VWN + V + SP+ IS
Sbjct: 856 ----TFLFAGSEDGIVYVWNPETGEQVAMYSDLPFKSPIRDIS 894
>Hs18874090 [S] KOG0308 Conserved WD40 repeat-containing protein
Length = 677
Score = 51.6 bits (122), Expect = 2e-06
Identities = 37/159 (23%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTV------EI 95
LI+ +T + V+ M THK+ + L ++ D + +AS D + +
Sbjct: 90 LISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTL 149
Query: 96 THIIYGR----IRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAH 151
T + L G+ + S+ N G I+ S S ++ ++ W + L + H
Sbjct: 150 TALTASNNTVTTSSLSGNKDSIYSLAMNQLGTIIVSGSTEKVLRVWDPRTCAKLMKLKGH 209
Query: 152 SDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKT 190
+D V ++ + + D + SGS DG IR++ C+ T
Sbjct: 210 TDNVKALLLNR-DGTQCLSGSSDGTIRLWSLGQQRCIAT 247
Score = 51.6 bits (122), Expect = 2e-06
Identities = 48/210 (22%), Positives = 92/210 (42%), Gaps = 20/210 (9%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILC 126
H + +N + + K + S S D TV++ + G + L H V ++ Y ++
Sbjct: 74 HTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYVKALAYAKDKELVA 133
Query: 127 SSSMDESIKEWHVLSGTAL---------KTMSAHSDAVVSIDIPKFDSSILSSGSYDGLI 177
S+ +D I W V + TAL ++S + D++ S+ + + +I+ SGS + ++
Sbjct: 134 SAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQL-GTIIVSGSTEKVL 192
Query: 178 RIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTV 237
R++D + L L D + + +R+G L S D ++LW +
Sbjct: 193 RVWDPRTCAKLMKLKGHTD--------NVKALLLNRDGTQCLSGSSDGTIRLWSLGQQRC 244
Query: 238 VRTFLWPHQETKAKLKYNCGLELIYPQGKD 267
+ T+ H E L+ N +Y G+D
Sbjct: 245 IATYR-VHDEGVWALQVNDAFTHVYSGGRD 273
>At3g18130 [T] KOG0279 G protein beta subunit-like protein
Length = 326
Score = 51.6 bits (122), Expect = 2e-06
Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 14/175 (8%)
Query: 66 TTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRI-RRLMGHTAPVISICYNNKGNI 124
T H + + S D + SGS D + + + G RR +GHT V+S+ ++
Sbjct: 60 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQ 119
Query: 125 LCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSIL----SSGSYDGLIRIF 180
+ S+S D +IK W+ L G T+S + +F + L S S+D ++++
Sbjct: 120 IVSASRDRTIKLWNTL-GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 181 DTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
+ ++ +L + ++TV S +G D V+ LW+ G
Sbjct: 179 NLQNCKLRNSLVGHSGY--------LNTVAVSPDGSLCASGGKDGVILLWDLAEG 225
Score = 50.8 bits (120), Expect = 3e-06
Identities = 45/210 (21%), Positives = 107/210 (50%), Gaps = 19/210 (9%)
Query: 36 ISPDGEL-IAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVE 94
+S DG+ ++ + ++ ++++++ + + H + + + +S D++ I S S D T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIK 130
Query: 95 ITHIIYGRIRRLM----GHTAPVISICY--NNKGNILCSSSMDESIKEWHVLSGTALKTM 148
+ + + G + + GH V + + N + S+S D+++K W++ + ++
Sbjct: 131 LWNTL-GECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSL 189
Query: 149 SAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPIST 208
HS + ++ + D S+ +SG DG+I ++D G L +L E G + I +
Sbjct: 190 VGHSGYLNTVAVSP-DGSLCASGGKDGVILLWDLAEGKKLYSL--------EAGSI-IHS 239
Query: 209 VKFSRNGKFLLVKSLDNVVKLWEYTRGTVV 238
+ FS N ++ L + +N +++W+ +VV
Sbjct: 240 LCFSPN-RYWLCAATENSIRIWDLESKSVV 268
>At2g37670 [S] KOG0283 WD40 repeat-containing protein
Length = 903
Score = 51.6 bits (122), Expect = 2e-06
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GH ++ + ++ K +L SSSMD++++ W + + T LK + AH+D V I D
Sbjct: 502 LKGHLDAILDLSWS-KSQLLLSSSMDKTVRLWDIETKTCLK-LFAHNDYVTCIQFSPVDE 559
Query: 166 SILSSGSYDGLIRIFDTESGHCLK 189
+ SGS D IRI+ + H ++
Sbjct: 560 NYFLSGSLDAKIRIWSIQDRHVVE 583
>7301852 [S] KOG0283 WD40 repeat-containing protein
Length = 916
Score = 51.6 bits (122), Expect = 2e-06
Identities = 47/177 (26%), Positives = 80/177 (44%), Gaps = 25/177 (14%)
Query: 108 GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSI 167
GHT+ ++ + ++ K + SSSMD++++ WH+ L H D V +I D
Sbjct: 575 GHTSDLLDVSWS-KNYFILSSSMDKTVRLWHISRKECLCCFQ-HIDFVTAIAFHPRDDRY 632
Query: 168 LSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP-ISTVKFSRNGKFLLVKSLD-- 224
SGS DG +R+++ W DG I+ F +NG+F +V S D
Sbjct: 633 FLSGSLDGKLRLWNIPDKKVAL-------WNEVDGQTKLITAANFCQNGQFAVVGSYDGR 685
Query: 225 ----NVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQ-GKDPLVISGNDS 276
N +L +T+ V + T+ K + + I P G+D ++++ NDS
Sbjct: 686 CIFYNTDQLKYHTQIHV--------RSTRGKNRIGRKISGIEPMPGEDKILVTSNDS 734
>7297305 [T] KOG0279 G protein beta subunit-like protein
Length = 318
Score = 51.6 bits (122), Expect = 2e-06
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 80 DSKCIASGSEDFTV--------EITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMD 131
D I S S D T+ E T+ Y + +RL GH+ + + ++ GN S S D
Sbjct: 27 DPDTIISASRDKTLIVWKLTRDEDTNYGYPQ-KRLYGHSHFISDVVLSSDGNYALSGSWD 85
Query: 132 ESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTL 191
++++ W + +G + H+ V+S+ D+ + SGS D I++++T C T+
Sbjct: 86 QTLRLWDLAAGKTTRRFEGHTKDVLSVAF-SADNRQIVSGSRDKTIKLWNT-LAECKFTI 143
Query: 192 TYD--KDWIAEDGVVPISTVKFSRNGKFLLVKSL--DNVVKLW 230
D DW +S V+FS N ++ S D VK+W
Sbjct: 144 QEDGHTDW--------VSCVRFSPNHSNPIIVSCGWDRTVKVW 178
>YPR178w [A] KOG0272 U4/U6 small nuclear ribonucleoprotein Prp4 (contains
WD40 repeats)
Length = 465
Score = 51.2 bits (121), Expect = 2e-06
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 16/169 (9%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHI-IYGRIRRLMGHTAPVISICYNNKGNILC 126
H+ I+ + + P K I S S D T + + + GH V S+ + G+++C
Sbjct: 264 HERRISDVKYHPSGKFIGSASHDMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVC 323
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD---TE 183
S MD W + SG+ + T++ HS + ++ + + G DG+I ++D +
Sbjct: 324 SGGMDSLSMLWDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGG-DGIINVWDIRKRD 382
Query: 184 SGHCLKTLTYDKDWIAEDGVVPISTVKFSR--NGKFLLVKSLDNVVKLW 230
G + L + ++ V+FS+ GK L+ DN++ ++
Sbjct: 383 EGQLNQILAHRN---------IVTQVRFSKEDGGKKLVSCGYDNLINVY 422
Score = 50.4 bits (119), Expect = 3e-06
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 15/199 (7%)
Query: 38 PDGELIAICQNTDML--VYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI 95
P G+ I + DM +++ S+ + + L H + + L + D + SG D +
Sbjct: 275 PSGKFIGSASH-DMTWRLWDASTHQELLLQEGHDKGVFSLSFQCDGSLVCSGGMDSLSML 333
Query: 96 THIIYG-RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTA--LKTMSAHS 152
I G ++ L GH+ P+ ++ ++ G + + D I W + L + AH
Sbjct: 334 WDIRSGSKVMTLAGHSKPIYTVAWSPNGYQVATGGGDGIINVWDIRKRDEGQLNQILAHR 393
Query: 153 DAVVSIDIPKFDSSI-LSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKF 211
+ V + K D L S YD LI ++ +++ + +L D I ++
Sbjct: 394 NIVTQVRFSKEDGGKKLVSCGYDNLINVYSSDTWLKMGSLAGHTD--------KIISLDI 445
Query: 212 SRNGKFLLVKSLDNVVKLW 230
S N FL+ D +KLW
Sbjct: 446 SNNSHFLVSGGWDRSIKLW 464
>Hs5901892 [R] KOG1274 WD40 repeat protein
Length = 1129
Score = 51.2 bits (121), Expect = 2e-06
Identities = 32/117 (27%), Positives = 57/117 (48%), Gaps = 2/117 (1%)
Query: 28 GKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASG 87
G+ + SC + G+L+ N + V+ + T N + ++ D IA+G
Sbjct: 54 GEKAYSCALK-SGKLVTAVSNNTIQVHTFPEGVPDGILTRFTTNANHVVFNGDGTKIAAG 112
Query: 88 SEDFTVEITHII-YGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGT 143
S DF V+I ++ + + GH APV+S+ ++ K L S+S D S++ W + T
Sbjct: 113 SSDFLVKIVDVMDSSQQKTFRGHDAPVLSLSFDPKDIFLASASCDGSVRVWQISDQT 169
>At3g15470 [S] KOG0283 WD40 repeat-containing protein
Length = 883
Score = 51.2 bits (121), Expect = 2e-06
Identities = 50/219 (22%), Positives = 100/219 (44%), Gaps = 17/219 (7%)
Query: 108 GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSI 167
GH V+ + ++ ++L SSSMD++++ W++ S T LK S HSD V I D
Sbjct: 511 GHVDDVLDLAWSKSQHLL-SSSMDKTVRLWNLSSQTCLKVFS-HSDYVTCIQFNPVDDRY 568
Query: 168 LSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVV 227
SGS D +R++ + DW D +++ ++ +G+ +LV S
Sbjct: 569 FISGSLDAKVRVWSIPDRQVV-------DWY--DLHEMVTSACYTPDGQGVLVGSYKGSC 619
Query: 228 KLWEYTRGTVVR--TFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVY 285
+++ + + + +++ KA K G + + P ++++ +DS + V
Sbjct: 620 RMYSASDNKLQQKSQINLQNKKKKAHQKKITGFQFV-PGSSSEVLVTSSDSR---IRVVD 675
Query: 286 SKNLVQKIDEKHRNSPLISISASYDKVATLSLNGECNLF 324
+LV K+ S IS S + D +S + + +++
Sbjct: 676 GTDLVNKLKGFRNTSSQISASITADGKYVVSASEDSHVY 714
>Hs4757988 [R] KOG0645 WD40 repeat protein
Length = 339
Score = 50.8 bits (120), Expect = 3e-06
Identities = 42/177 (23%), Positives = 77/177 (42%), Gaps = 21/177 (11%)
Query: 64 LTTTHKECINCLCWSPDSKCIASGSEDFTVEI---THIIYGRIRRLMGHTAPVISICYNN 120
L+ H+ + + WSP +AS S D T I + + L GH V S+ +
Sbjct: 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAP 115
Query: 121 KGNILCSSSMDESIKEWHVLSG---TALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLI 177
GN+L + S D+S+ W V + +++H+ V + + +L+S SYD +
Sbjct: 116 SGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV-VWHPSQELLASASYDDTV 174
Query: 178 RIFDTESGHCLKTLTYDKDWIA----EDGVVPISTVKFSRNGKFLLVKSLDNVVKLW 230
+++ E + DW+ E + ++ F +G+ L S D V++W
Sbjct: 175 KLYREE----------EDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221
>Hs13376751 [R] KOG0266 WD40 repeat-containing protein
Length = 392
Score = 50.8 bits (120), Expect = 3e-06
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 6/142 (4%)
Query: 55 EISSSKMMKLTTT----HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLM-GH 109
E +SSK + TT H + I CL S S S D T++I G +RR++ GH
Sbjct: 74 ENASSKFLAPYTTFSRIHTKSITCLDISSRGGLGVSSSTDGTMKIWQASNGELRRVLEGH 133
Query: 110 TAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILS 169
V + G ++ S MD +K W + + T H ++ I +++S
Sbjct: 134 VFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGILDTAIVDRGRNVVS 193
Query: 170 SGSYDGLIRIFDTESGHCLKTL 191
+ S DG R++D CL L
Sbjct: 194 A-SRDGTARLWDCGRSACLGVL 214
>Hs4759276 [A] KOG0299 U3 snoRNP-associated protein (contains WD40 repeats)
Length = 475
Score = 50.4 bits (119), Expect = 3e-06
Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 2/114 (1%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHI-IYGRIRRLMGHTAPVISICYNNKGNILC 126
H + C+ S D K +ASG + I + GH V + + + L
Sbjct: 198 HSSHVLCMAISSDGKYLASGDRSKLILIWEAQSCQHLYTFTGHRDAVSGLAFRRGTHQLY 257
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIF 180
S+S D S+K W+V + ++T+ H DAV ++D + + ++G DG +R++
Sbjct: 258 STSHDRSVKVWNVAENSYVETLFGHQDAVAALDALSRECCV-TAGGRDGTVRVW 310
>Hs22059675 [S] KOG0283 WD40 repeat-containing protein
Length = 913
Score = 50.4 bits (119), Expect = 3e-06
Identities = 51/205 (24%), Positives = 93/205 (44%), Gaps = 14/205 (6%)
Query: 108 GHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSI 167
GHTA ++ + ++ K L SSSMD++++ WH+ L H D V +I D
Sbjct: 605 GHTADLLDLSWS-KNYFLLSSSMDKTVRLWHISRRECLCCFQ-HIDFVTAIAFHPRDDRY 662
Query: 168 LSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVP-ISTVKFSRNGKFLLVKSLDNV 226
SGS DG +R+++ W DG I+ F +NGK+ ++ + D
Sbjct: 663 FLSGSLDGKLRLWNIPDKKVAL-------WNEVDGQTKLITAANFCQNGKYAVIGTYDGR 715
Query: 227 VKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYP-QGKDPLVISGNDSGSMCVWNVY 285
++ T T + + T+ + K + I P G++ ++++ NDS + ++++
Sbjct: 716 CIFYD-TEHLKYHTQIHV-RSTRGRNKVGRKITGIEPLPGENKILVTSNDS-RIRLYDLR 772
Query: 286 SKNLVQKIDEKHRNSPLISISASYD 310
+L K +S I S S+D
Sbjct: 773 DLSLSMKYKGYVNSSSQIKASFSHD 797
>ECU04g1250 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 371
Score = 50.4 bits (119), Expect = 3e-06
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 11/218 (5%)
Query: 17 LQFDKQVLPASGKISTSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLC 76
+ +K+V A + +S +G +I+ L S + + H + I L
Sbjct: 145 ISVNKEVHKARNHNARVSSLSWNGNVISSGDKAGRLCNFDIRSGRISVVGGHSQEICGLA 204
Query: 77 WSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNN-KGNILCS--SSMDES 133
WS D K +ASG D + I + + L GH + V ++ + + IL S + D +
Sbjct: 205 WSADMKYLASGGNDNVIRIWQLGNNNSQTLSGHKSAVKALAWCPWRSGILTSGGGAKDMT 264
Query: 134 IKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTY 193
IK W V+ +++ S +PK+ I S G + IRI+ + + + +
Sbjct: 265 IKFWDVVENKMERSIDTQSQVCTLTYLPKYKEVISSHGYSENDIRIWKASTMNLISSFGK 324
Query: 194 DKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
+ V S +G L S D +K W+
Sbjct: 325 HNSRVLH--------VALSPDGSELASVSADENLKFWK 354
>At5g24320 [S] KOG0283 WD40 repeat-containing protein
Length = 694
Score = 50.4 bits (119), Expect = 3e-06
Identities = 40/172 (23%), Positives = 76/172 (43%), Gaps = 12/172 (6%)
Query: 52 LVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTA 111
+ +E+S ++ K+ I SP K S +I ++ + +GH+
Sbjct: 299 IYFEVSKLSELRPVAVEKDGITGSLMSP-RKTTESACVIIPPKIFRVLDKPLHEFLGHSG 357
Query: 112 PVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSG 171
++ I ++ K N L S+S+D S++ W + L S H++ V S+ D SG
Sbjct: 358 DILDISWS-KNNRLLSASVDNSVRLWQIGCEDCLGIFS-HNNYVTSVQFNPVDDDHFISG 415
Query: 172 SYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSL 223
S DG +RI+ + DW G+V + V + +G+ +++ +L
Sbjct: 416 SIDGKVRIWSASQCQVV-------DWADARGIV--TAVCYQPDGQAVIIGTL 458
>7290520 [DO] KOG0305 Anaphase promoting complex Cdc20 Cdh1 and Ama1
subunits
Length = 478
Score = 50.4 bits (119), Expect = 3e-06
Identities = 61/289 (21%), Positives = 120/289 (41%), Gaps = 47/289 (16%)
Query: 27 SGKISTSCQISPD------------GELIAI-CQNTDMLVYEISSSKMMKLTTTHKECIN 73
+ +++ C +SPD G +A+ + + V++++++K + H +
Sbjct: 201 TSQVTRLCDLSPDANTVTSVSWNERGNTVAVGTHHGYVTVWDVAANKQINKLNGHSARVG 260
Query: 74 CLCWSPDSKCIASGSEDFTVEITHIIYGRI---RRLMGHTAPVISICYNNKGNILCSSSM 130
L W+ D ++SGS D + ++ RRL GH V + ++ L S
Sbjct: 261 ALAWNSD--ILSSGSRDRWIIQRDTRTPQLQSERRLAGHRQEVCGLKWSPDNQYLASGGN 318
Query: 131 DESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSS--GSYDGLIRIFDTESGHCL 188
D + W+ S +++ + H AV +I +L+S G+ D IR ++T +G +
Sbjct: 319 DNRLYVWNQHSVNPVQSYTEHMAAVKAIAWSPHHHGLLASGGGTADRCIRFWNTLTGQPM 378
Query: 189 KTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKS--LDNVVKLWEYTRGTVVRTFLWPHQ 246
+ + D + + +S++ L+ N + +W+Y T V
Sbjct: 379 QCV---------DTGSQVCNLAWSKHSSELVSTHGYSQNQILVWKYPSLTQV-------- 421
Query: 247 ETKAKL---KYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQK 292
AKL Y + P G+ +++G ++ WNV+SK QK
Sbjct: 422 ---AKLTGHSYRVLYLALSPDGE--AIVTGAGDETLRFWNVFSKARSQK 465
>YNL006w [R] KOG0315 G-protein beta subunit-like protein (contains WD40
repeats)
Length = 303
Score = 50.1 bits (118), Expect = 4e-06
Identities = 48/278 (17%), Positives = 121/278 (43%), Gaps = 21/278 (7%)
Query: 35 QISPDGELIAICQNTDMLVYEISSSKMMKLTTT--HKECINCLCWSPDSKCIASGSEDFT 92
+I+ D +L+A + ++ +Y+I ++ + + H+ + + + D++ + + SED T
Sbjct: 39 EITNDKKLLATAGHQNVRLYDIRTTNPNPVASFEGHRGNVTSVSFQQDNRWMVTSSEDGT 98
Query: 93 VEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHS 152
+++ + I R H APV + + L S D +I+ W + ++
Sbjct: 99 IKVWDVRSPSIPRNYKHNAPVNEVVIHPNQGELISCDRDGNIRIWDLGENQCTHQLTPED 158
Query: 153 DAVVSIDIPKFDSSILSSGSYDGLIRIFD----TESGHCLKTLTYDKDWIAEDGVVPIST 208
D + D S+L++ + G +++ T++ H LK +T + I+
Sbjct: 159 DTSLQSLSMASDGSMLAAANTKGNCYVWEMPNHTDASH-LKPVTKFRAHSTY-----ITR 212
Query: 209 VKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDP 268
+ S + K L S D+ ++W + T L HQ + ++C
Sbjct: 213 ILLSSDVKHLATCSADHTARVWSIDDDFKLETTLDGHQ----RWVWDCAF-----SADSA 263
Query: 269 LVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISIS 306
+++ + + +W++ ++ +V++ H+ + ++++
Sbjct: 264 YLVTASSDHYVRLWDLSTREIVRQYGGHHKGAVCVALN 301
>Hs5902034 [S] KOG0270 WD40 repeat-containing protein
Length = 501
Score = 50.1 bits (118), Expect = 4e-06
Identities = 24/78 (30%), Positives = 43/78 (54%), Gaps = 1/78 (1%)
Query: 108 GHTAPVISICYNNK-GNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSS 166
GHT V+ + +N N+L S+S D ++ W + G +++ H+D V ++ F++
Sbjct: 254 GHTDAVLDLSWNKLIRNVLASASADNTVILWDMSLGKPAASLAVHTDKVQTLQFHPFEAQ 313
Query: 167 ILSSGSYDGLIRIFDTES 184
L SGSYD + ++D S
Sbjct: 314 TLISGSYDKSVALYDCRS 331
>Hs4826970 [R] KOG1273 WD40 repeat protein
Length = 538
Score = 50.1 bits (118), Expect = 4e-06
Identities = 36/205 (17%), Positives = 91/205 (43%), Gaps = 7/205 (3%)
Query: 30 ISTSCQISPDGELIAI-CQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGS 88
++ +C + G L+A+ C + +++++ + + K+ + H + LCWS D + S S
Sbjct: 26 MALTCTFNRWGTLLAVGCNDGRIVIWDFLTRGIAKIISAHIHPVCSLCWSRDGHKLVSAS 85
Query: 89 EDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTM 148
D V ++ G + +P++ + Y+ + +S LS + +
Sbjct: 86 TDNIVSQWDVLSGDCDQRFRFPSPILKVQYHPRDQNKVLVCPMKSAPVMLTLSDSKHVVL 145
Query: 149 SAHSDAVVSIDIPKFD--SSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPI 206
D+ +++ + FD + +G+ G I + T+S + + + I
Sbjct: 146 PVDDDSDLNV-VASFDRRGEYIYTGNAKGKILVLKTDSQDLVASF---RVTTGTSNTTAI 201
Query: 207 STVKFSRNGKFLLVKSLDNVVKLWE 231
+++F+R G L+ + D ++++++
Sbjct: 202 KSIEFARKGSCFLINTADRIIRVYD 226
>Hs20548461 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 736
Score = 50.1 bits (118), Expect = 4e-06
Identities = 60/280 (21%), Positives = 112/280 (39%), Gaps = 45/280 (16%)
Query: 60 KMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICY 118
KM K H + C+ + + I +GS+D V+I GR + L GH+A + +
Sbjct: 202 KMHKRILGHLSSVYCVAFDRSGRRIFTGSDDCLVKIWATDDGRLLATLRGHSAEISDMAV 261
Query: 119 NNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDI---PKFDSSILSSGSYDG 175
N + ++ + S D+ ++ W + + + + HS ++ SI K + L+S DG
Sbjct: 262 NYENTLIAAGSCDKVVRVWCLRTCAPVAVLQGHSASITSIQFCPSTKGTNRYLTSTGADG 321
Query: 176 LIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTR- 234
I + W + T+KFS + S D ++W+Y +
Sbjct: 322 TICFW---------------QW-------HVKTMKFSLR---FVSGSRDGTARIWQYQQQ 356
Query: 235 ---------GTVVRTFLWPHQETK-AKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNV 284
T + P E K KLK + ++ D VI+ ++ + VWN
Sbjct: 357 EWKSIVLDMATKMTGNNLPSGEDKITKLK----VTMVAWDRYDTTVITAVNNFLLKVWNS 412
Query: 285 YSKNLVQKIDEKHRNSPLISISASYDKVATLSLNGECNLF 324
+ L+ + H + + + +D+ LS + N+F
Sbjct: 413 ITGQLLHTL-SGHDDEVFVLEAHPFDQRIILSAGHDGNIF 451
>At2g47990 [S] KOG0310 Conserved WD40 repeat-containing protein
Length = 530
Score = 50.1 bits (118), Expect = 4e-06
Identities = 28/119 (23%), Positives = 54/119 (44%), Gaps = 7/119 (5%)
Query: 113 VISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGS 172
V S+C+ + G + + + ++ + + AL+T+ +HS + P D L SG
Sbjct: 96 VSSVCFRSDGALFAACDLSGVVQVFDIKERMALRTLRSHSAPARFVKYPVQDKLHLVSGG 155
Query: 173 YDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
DG+++ +D + L KD++ P+ N L+ S D+ VK+W+
Sbjct: 156 DDGVVKYWDVAGATVISDLLGHKDYVRCGDCSPV-------NDSMLVTGSYDHTVKVWD 207
>7293188 [D] KOG0267 Microtubule severing protein katanin p80 subunit B
(contains WD40 repeats)
Length = 296
Score = 50.1 bits (118), Expect = 4e-06
Identities = 48/256 (18%), Positives = 105/256 (40%), Gaps = 28/256 (10%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILC 126
H + L + + +G ED V + I L GH + + + K N +
Sbjct: 17 HDSRVTSLDLGETGRVLVTGGEDRNVNLWAIGQNECFMSLTGHNRSIDCVRFAYKDNFVY 76
Query: 127 SSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTES-G 185
S+ I+ W + S T++ H +V ++D ++ SGS D +R++D ++
Sbjct: 77 SADDIGIIRRWDLNSQKIYSTLNGHMKSVRTLDFNPSGEYVV-SGSNDTTVRLWDVQNEN 135
Query: 186 HCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPH 245
+C+K + + +++VKFS +G ++ L+ + +W+ + + F+
Sbjct: 136 NCIK--------VCRGHMSHVNSVKFSPDGLWIASAGLEGSILIWDIRKSKQIMEFIADP 187
Query: 246 QETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVWNVYSKNLVQKIDEKHRNSPLISI 305
T + + + L+ +G G++ ++++ + LV + + +
Sbjct: 188 PVT--------AITCVQFHPFEFLLAAGRVDGTVSIYDLEHQQLVSQTTHFYGQA----- 234
Query: 306 SASYDKVATLSLNGEC 321
+ T S NGEC
Sbjct: 235 ----IRCITFSDNGEC 246
>SPAC343.04c [S] KOG0293 WD40 repeat-containing protein
Length = 507
Score = 49.7 bits (117), Expect = 6e-06
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 5/147 (3%)
Query: 41 ELIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEITHIIY 100
E + ++ + +Y + + + +K + + + +C S DSK + E T + +
Sbjct: 356 EQLINAEDKHIAIYSVETRECIKKISLQSK-VTSICLSKDSKYALTNLEPHTTFLWDLEE 414
Query: 101 GRI-RRLMGHTAP--VISICYNNKGN-ILCSSSMDESIKEWHVLSGTALKTMSAHSDAVV 156
RI R+ MGH +I C+ K + + S S D+ I+ WH SG L T+S H V
Sbjct: 415 NRIVRQYMGHKLGNFLIGSCFGGKDDTFVLSGSEDDKIRIWHRESGKLLATLSGHVKCVN 474
Query: 157 SIDIPKFDSSILSSGSYDGLIRIFDTE 183
+ D +S D +RI+ +
Sbjct: 475 YVAYNPVDPYQFASAGDDNTVRIWSNK 501
>Hs22043408 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 98
Score = 49.7 bits (117), Expect = 6e-06
Identities = 25/81 (30%), Positives = 45/81 (54%), Gaps = 1/81 (1%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GH + I YN +G++L + + D + W+ ++G L T H+ AV +D +D+
Sbjct: 6 LQGHERSITQIKYNREGDLLFTVAKDPIVNVWYSVNGERLGTYMGHTGAVWCVD-ADWDT 64
Query: 166 SILSSGSYDGLIRIFDTESGH 186
+ +GS D R++D E+G+
Sbjct: 65 KHVLTGSADNSCRLWDCETGN 85
>Hs16445438 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2269
Score = 49.7 bits (117), Expect = 6e-06
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 86 SGSEDFTVEITHIIYGRI---RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG 142
+G F+ +Y I RR++GH + V + ++ G+ + + S D +K W +G
Sbjct: 159 TGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNG 218
Query: 143 TALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDG 202
L T+ HS A +S ++++++++GS D +IR++ CL+T + +
Sbjct: 219 RLLSTLRGHS-AEISDMAVNYENTMIAAGSCDKIIRVW------CLRTCA--PVAVLQGH 269
Query: 203 VVPISTVKFSRNGK----FLLVKSLDNVVKLWEY 232
I++++FS K +++ D V W++
Sbjct: 270 TGSITSLQFSPMAKGSQRYMVSTGADGTVCFWQW 303
Score = 49.3 bits (116), Expect = 8e-06
Identities = 30/104 (28%), Positives = 52/104 (49%), Gaps = 3/104 (2%)
Query: 113 VISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGS 172
V I +N +I+ ++ D +K W+ +G L + H+D V ++ FDS I+ S
Sbjct: 429 VTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAG 488
Query: 173 YDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGK 216
+DG I I+D G +K + + I G + KFS++G+
Sbjct: 489 HDGSIFIWDITKGTKMK---HYFNMIEGQGHGAVFDCKFSQDGQ 529
>Hs16445436 [R] KOG0644 Uncharacterized conserved protein contains WD40 repeat
and BROMO domains
Length = 2320
Score = 49.7 bits (117), Expect = 6e-06
Identities = 36/154 (23%), Positives = 75/154 (48%), Gaps = 16/154 (10%)
Query: 86 SGSEDFTVEITHIIYGRI---RRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG 142
+G F+ +Y I RR++GH + V + ++ G+ + + S D +K W +G
Sbjct: 159 TGCSTFSTAFPGTMYQHIKMHRRILGHLSAVYCVAFDRTGHRIFTGSDDCLVKIWSTHNG 218
Query: 143 TALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDG 202
L T+ HS A +S ++++++++GS D +IR++ CL+T + +
Sbjct: 219 RLLSTLRGHS-AEISDMAVNYENTMIAAGSCDKIIRVW------CLRTCA--PVAVLQGH 269
Query: 203 VVPISTVKFSRNGK----FLLVKSLDNVVKLWEY 232
I++++FS K +++ D V W++
Sbjct: 270 TGSITSLQFSPMAKGSQRYMVSTGADGTVCFWQW 303
Score = 49.3 bits (116), Expect = 8e-06
Identities = 30/104 (28%), Positives = 52/104 (49%), Gaps = 3/104 (2%)
Query: 113 VISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGS 172
V I +N +I+ ++ D +K W+ +G L + H+D V ++ FDS I+ S
Sbjct: 429 VTMIAWNQNDSIVVTAVNDHVLKVWNSYTGQLLHNLMGHADEVFVLETHPFDSRIMLSAG 488
Query: 173 YDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGK 216
+DG I I+D G +K + + I G + KFS++G+
Sbjct: 489 HDGSIFIWDITKGTKMK---HYFNMIEGQGHGAVFDCKFSQDGQ 529
>Hs11055998 [R] KOG0286 G-protein beta subunit
Length = 340
Score = 49.7 bits (117), Expect = 6e-06
Identities = 49/219 (22%), Positives = 93/219 (42%), Gaps = 16/219 (7%)
Query: 24 LPASGKISTSCQISPDGELIAICQNTDML--VYEISSS----KMMKLTTTHKECINCLCW 77
+P +C +P G +A C D + +Y + + ++ + H ++C +
Sbjct: 93 IPLRSSWVMTCAYAPSGNYVA-CGGLDNICSIYNLKTREGNVRVSRELPGHTGYLSCCRF 151
Query: 78 SPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILCSSSMDESIKE 136
DS+ + S S D T + I + GH+ V+S+ + S + D S K
Sbjct: 152 LDDSQIVTS-SGDTTCALWDIETAQQTTTFTGHSGDVMSLSLSPDMRTFVSGACDASSKL 210
Query: 137 WHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKD 196
W + G ++ + H + ++ + ++GS D R+FD + L L Y D
Sbjct: 211 WDIRDGMCRQSFTGHVSDINAVSFFP-NGYAFATGSDDATCRLFDLRADQEL--LLYSHD 267
Query: 197 WIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRG 235
I + I++V FS++G+ LL D +W+ +G
Sbjct: 268 NI----ICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKG 302
>CE25603 [JT] KOG0643 Translation initiation factor 3 subunit i
(eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1)
Length = 318
Score = 49.7 bits (117), Expect = 6e-06
Identities = 53/222 (23%), Positives = 95/222 (41%), Gaps = 23/222 (10%)
Query: 106 LMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDS 165
L GH + + +N +G++ S + D+ W+ +G + + H+ AV ID+ +D+
Sbjct: 6 LKGHERALTRVRFNREGDLTFSCAKDKKPCVWYTENGERIGSYDGHNGAVWDIDV-SWDT 64
Query: 166 SILSSGSYDGLIRIFDTESGHCLKTLTYDK-----DWIAEDGVVPISTVKFSRNGKFLLV 220
+ + S D ++I+D E G+CL T+ + + +V +T K ++N V
Sbjct: 65 TKCVTASGDLTVKIWDAELGNCLYTINHQTPMKSCGFSYSGNLVCFTTQKMTKNLSTFQV 124
Query: 221 KSLDNVVKLWE------YTRGTV-VRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISG 273
+ L + ++ E Y++ V T L+ + + + GL Y I
Sbjct: 125 RDLRDSSQMVEGGESFFYSQFDVNATTALFTQMDDLVTIGFESGLLQQYDLRNPDTPIHT 184
Query: 274 NDSGSMCVWNVYSKNLVQKIDEKHRNSPLISISASYDKVATL 315
N+S + VQ + R L ISAS DK A L
Sbjct: 185 NES--------VHRYSVQDLQLSPRGDFL--ISASRDKTAAL 216
>At5g42010 [S] KOG0283 WD40 repeat-containing protein
Length = 709
Score = 49.7 bits (117), Expect = 6e-06
Identities = 30/102 (29%), Positives = 50/102 (48%), Gaps = 6/102 (5%)
Query: 80 DSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHV 139
+S C S+ F++ T GHT ++ + ++ KG +L SSS+DE+++ W V
Sbjct: 338 ESTCAVLPSKVFSISETPQ-----HEFRGHTGEILDLSWSEKGFLL-SSSVDETVRLWRV 391
Query: 140 LSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
S + +H V + D + SGS DG +RI+D
Sbjct: 392 GSSDECIRVFSHKSFVTCVAFNPVDDNYFISGSIDGKVRIWD 433
>At4g34380 [R] KOG4155 FOG: WD40 repeat
Length = 495
Score = 49.7 bits (117), Expect = 6e-06
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 15/174 (8%)
Query: 109 HTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSIL 168
H V S+ + + +L SSS D +IK W + L+++ AH DA+ S+ + FD ++
Sbjct: 234 HNDAVSSLSLDVELGLLYSSSWDTTIKVWRIADSKCLESIHAHDDAINSV-MSGFD-DLV 291
Query: 169 SSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
+GS DG ++++ E T + + ++ V VK + S D +V
Sbjct: 292 FTGSADGTVKVWKRELQGKGTKHTLAQVLLKQENAVTALAVK--SQSSIVYCGSSDGLVN 349
Query: 229 LWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSGSMCVW 282
WE ++ + L H+ L L++SG+ ++CVW
Sbjct: 350 YWERSKRSFTGGILKGHKSAVLCLGI-----------AGNLLLSGSADKNICVW 392
>At4g32551 [R] KOG0266 WD40 repeat-containing protein
Length = 930
Score = 49.7 bits (117), Expect = 6e-06
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 21/207 (10%)
Query: 32 TSCQISPDGELIAICQNTDMLVYEISSSKMMKLTTT-HKECINCLCWSPDSKCIASGSED 90
T C S DG+++A + V + + K T H I + +SP +A+ S D
Sbjct: 662 TCCHFSSDGKMLASAGHDKKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFD 721
Query: 91 FTVEITHIIYGRIRRLMGHTAPVISICYNN-KGNILCSSSMDESIKEWHVLSGTALKTMS 149
T + +R MGH++ V S+ ++ K +++CS D I+ W + +G+ +
Sbjct: 722 KTKGYS------LRTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGSCTRVYK 775
Query: 150 AHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTV 209
S + P+ + +S + L+ + D E+ +L + PI++V
Sbjct: 776 GGSTQIRF--QPRVGKYLAASSA--NLVNVLDVETQAIRHSL--------QGHANPINSV 823
Query: 210 KFSRNGKFLLVKSLDNVVKLWEYTRGT 236
+ +G FL S +++VK+W G+
Sbjct: 824 CWDPSGDFLASVS-EDMVKVWTLGTGS 849
>At1g64610 [S] KOG0283 WD40 repeat-containing protein
Length = 647
Score = 49.7 bits (117), Expect = 6e-06
Identities = 30/104 (28%), Positives = 52/104 (49%), Gaps = 7/104 (6%)
Query: 78 SPDSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEW 137
S DS C+ F++ + GH ++ + ++ KG +L SSS+DE+++ W
Sbjct: 295 SSDSTCVVLPPTIFSISEKPL-----HEFKGHIGEILDLSWSEKGYLL-SSSVDETVRLW 348
Query: 138 HVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFD 181
V L+T + H++ V + D + SGS DG +RI+D
Sbjct: 349 RVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWD 391
>YGL137w [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 889
Score = 49.3 bits (116), Expect = 8e-06
Identities = 48/202 (23%), Positives = 88/202 (42%), Gaps = 17/202 (8%)
Query: 84 IASGSEDFTVEITHIIYG-RIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSG 142
I GS+DF + + + G ++ H + SI + + S S D ++K W+ +
Sbjct: 70 IIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN 129
Query: 143 TALK-TMSAHSDAVVSIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAED 201
AL+ T H V+ + D S +SG D ++++ TLT + E
Sbjct: 130 WALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQ----ER 185
Query: 202 GVVPISTVKFSRNGKFLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELI 261
GV + + +++ S D +K+W+Y + V T L H N +
Sbjct: 186 GVNYVDYYPLP-DKPYMITASDDLTIKIWDYQTKSCVAT-LEGHMS-------NVSFAVF 236
Query: 262 YPQGKDPLVISGNDSGSMCVWN 283
+P P++ISG++ G++ +WN
Sbjct: 237 HPTL--PIIISGSEDGTLKIWN 256
>CE18673 [U] KOG0276 Vesicle coat complex COPI beta' subunit
Length = 1000
Score = 49.3 bits (116), Expect = 8e-06
Identities = 50/252 (19%), Positives = 116/252 (45%), Gaps = 22/252 (8%)
Query: 42 LIAICQNTDMLVYEISSSKMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI-THIIY 100
L+A N ++ ++ + ++K + + P + +GS+D + + +
Sbjct: 30 LLAALYNGNVHIWNYETQTLVKSFEVCDVPVRAAKFVPRKSWVVTGSDDMHIRVFNYNTL 89
Query: 101 GRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALK-TMSAHSDAVVSID 159
R+ + H+ + S+ + + SSS D +K W + A+K + H+ V+ I
Sbjct: 90 ERVHQFEAHSDYLRSLVVHPTLPYVISSSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIA 149
Query: 160 IPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGK--F 217
I D++ ++ S D ++++ + G + T + E GV + V + G+ +
Sbjct: 150 INPKDNNTFATASLDKTVKVW--QFGSNVPNFTLEGH---EKGV---NCVDYYHGGEKPY 201
Query: 218 LLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDSG 277
++ + D++VK+W+Y T V+T L H + + + ++ L PL+I+G++
Sbjct: 202 IISGADDHLVKIWDYQNKTCVQT-LDGHAQNVSSVCFHPEL---------PLIITGSEDS 251
Query: 278 SMCVWNVYSKNL 289
++ +W+ + L
Sbjct: 252 TVRLWHANTYRL 263
>At3g16650 [A] KOG0285 Pleiotropic regulator 1
Length = 477
Score = 49.3 bits (116), Expect = 8e-06
Identities = 48/229 (20%), Positives = 94/229 (40%), Gaps = 28/229 (12%)
Query: 97 HIIYGRIRRLMGHTAPVISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVV 156
H + R L GH V S+ ++ C+ S D +IK W V +G T++ H V
Sbjct: 155 HAPWKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVR 214
Query: 157 SIDIPKFDSSILSSGSYDGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGK 216
+ + + + S+G D ++ +D E +++ + + P V
Sbjct: 215 GLAVSNRHTYMFSAGD-DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDV------- 266
Query: 217 FLLVKSLDNVVKLWEYTRGTVVRTFLWPHQETKAKLKYNCGLELIYPQGKDPLVISGNDS 276
+L D+V ++W+ T ++ F+ PH + + + + DP VI+G+
Sbjct: 267 -VLTGGRDSVCRVWDIR--TKMQIFVLPH---------DSDVFSVLARPTDPQVITGSHD 314
Query: 277 GSMCVWNV-YSKNLVQKIDEKHRNSPLI-------SISASYDKVATLSL 317
++ W++ Y K++ + K + +SAS D + SL
Sbjct: 315 STIKFWDLRYGKSMATITNHKKTVRAMALHPKENDFVSASADNIKKFSL 363
>Hs22043515 [S] KOG0295 WD40 repeat-containing protein
Length = 414
Score = 48.9 bits (115), Expect = 1e-05
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 29/183 (15%)
Query: 68 HKECINCLCWSPDSKCIASGSEDFTVEITHIIYGR-IRRLMGHTAPVISICYNNKGNILC 126
H + ++ C+ P +A+ S D TV++ + G I GH+ V S +++ GN +
Sbjct: 34 HTDWLSDCCFHPSGDKLATSSGDTTVKLWDLCKGDCILTFEGHSRAVWSCTWHSCGNFVA 93
Query: 127 SSSMDESIKEWHVLSGTALKTMSAH---------------SDAVVSIDIPKFDSSILSSG 171
SSS+D++ K W V S T L+ + H D ++++ D+ G
Sbjct: 94 SSSLDKTSKIWDVNSETVLRAPNLHPKKVDLYFCTVQKEGRDHSTNLNMATEDNE--QEG 151
Query: 172 SYDGL---IRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVK 228
+Y G + ES C TL D +++++F LL S D +
Sbjct: 152 TYSGTKPEATKNNGESERCRCTLYGHTD--------SVNSIEFFPFSNTLLTSSADKTLS 203
Query: 229 LWE 231
+W+
Sbjct: 204 IWD 206
>At3g16830 [R] KOG0266 WD40 repeat-containing protein
Length = 1139
Score = 48.9 bits (115), Expect = 1e-05
Identities = 30/108 (27%), Positives = 54/108 (49%), Gaps = 7/108 (6%)
Query: 37 SPDGELIAICQNTDML---VYEISSSKMMKLTTTHKECINCLCWSPDSK--CIASGSEDF 91
SPDG L+ + ++ Y+ S + H C+N L ++ +K C+ + +D
Sbjct: 426 SPDGNLLGVSFTKHLIHVYAYQGSDLRQHLEIDAHVGCVNDLAFAHPNKQMCVVTCGDDK 485
Query: 92 TVEITHIIYGRIRRLMGHTAPVISICYNNKGNI--LCSSSMDESIKEW 137
+++ + ++ GH APV SIC + K NI + S+++D IK W
Sbjct: 486 LIKVWDLSGKKLFTFEGHEAPVYSICPHQKENIQFIFSTALDGKIKAW 533
>7302313 [Z] KOG0303 Actin-binding protein Coronin contains WD40 repeats
Length = 528
Score = 48.9 bits (115), Expect = 1e-05
Identities = 37/126 (29%), Positives = 60/126 (47%), Gaps = 15/126 (11%)
Query: 68 HKECINCLCWSP-DSKCIASGSEDFTVEITHIIYGRIRRLMGHTAPVISICYNNKG---- 122
HK + + W P + IASGSED V++ I G + R + T PV+ + ++ +
Sbjct: 80 HKGPVLDIAWCPHNDNVIASGSEDCVVKVWQIPDGGLSRTL--TEPVVDLVFHQRRVGLV 137
Query: 123 -------NILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSYDG 175
N+L ++ D + W+V +G L + +H D V S +D S L + D
Sbjct: 138 LWHPSALNVLLTAGSDNQVVIWNVGTGEILVHIDSHPDIVYSACF-NWDGSKLVTTCKDK 196
Query: 176 LIRIFD 181
IRI+D
Sbjct: 197 KIRIYD 202
>Hs18553366_1 [R] KOG4155 FOG: WD40 repeat
Length = 381
Score = 48.9 bits (115), Expect = 1e-05
Identities = 43/178 (24%), Positives = 81/178 (45%), Gaps = 19/178 (10%)
Query: 60 KMMKLTTTHKECINCLCWSPDSKCIASGSEDFTVEI------THIIYGRIRRLMGHTAPV 113
K++ H + +NC +S +A+ S D T+ + T + + ++ HT V
Sbjct: 3 KLIHTLADHGDDVNCCAFS--FSLLATCSLDKTIRLYSLRDFTELPHSPLKF---HTYAV 57
Query: 114 ISICYNNKGNILCSSSMDESIKEWHVLSGTALKTMSAHSDAVVSIDIPKFDSSILSSGSY 173
C++ G+IL S S D + W+ +G L M S + V + DS+ L+SG+
Sbjct: 58 HCCCFSPSGHILASCSTDGTTVLWNTENGQMLAVMEQPSGSPVRVCQFSPDSTCLASGAA 117
Query: 174 DGLIRIFDTESGHCLKTLTYDKDWIAEDGVVPISTVKFSRNGKFLLVKSLDNVVKLWE 231
DG + +++ +S + + +DG ++ FS NG F + S + +W+
Sbjct: 118 DGTVVLWNAQSYKLYRCGS------VKDG--SLAACAFSPNGSFFVTGSSCGDLTVWD 167
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.319 0.134 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,680,272
Number of Sequences: 60738
Number of extensions: 837628
Number of successful extensions: 6355
Number of sequences better than 1.0e-05: 248
Number of HSP's better than 0.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 4362
Number of HSP's gapped (non-prelim): 964
length of query: 327
length of database: 30,389,216
effective HSP length: 107
effective length of query: 220
effective length of database: 23,890,250
effective search space: 5255855000
effective search space used: 5255855000
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)