ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV6350 good O KOG3061 Posttranslational modification, protein turnover, chaperones Proteasome maturation factor
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV6350 2177223 2177666 148
(148 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YBR173c [O] KOG3061 Proteasome maturation factor 188 2e-48
SPCC14G10.03c [O] KOG3061 Proteasome maturation factor 69 2e-12
Hs7705429 [O] KOG3061 Proteasome maturation factor 51 5e-07
>YBR173c [O] KOG3061 Proteasome maturation factor
Length = 148
Score = 188 bits (478), Expect = 2e-48
Identities = 91/148 (61%), Positives = 116/148 (77%), Gaps = 2/148 (1%)
Query: 3 MNIVPSPDFKSAVATDKGCEHQSNAVASLPDVFREQVG-ARPLNTQLNDRHPLESRVRNW 61
MNIVP FKS V+TD+ S+AV SLPD R+Q G A PL+TQLNDRHPLES ++NW
Sbjct: 1 MNIVPQDTFKSQVSTDQDKSVLSSAVPSLPDTLRQQEGGAVPLSTQLNDRHPLESTLKNW 60
Query: 62 DETQHKRQLEQYRQIFGVAEPMKRVMELKLVQNTDFNPLN-QSNLHKDVLMNKEASIDWE 120
+ TQ +RQ+EQYRQIFG+AEPMKR ME+++V TDFNPL+ ++H+D+L+NKE SIDWE
Sbjct: 61 ETTQRQRQMEQYRQIFGIAEPMKRTMEMEIVNRTDFNPLSTNGSIHRDILLNKECSIDWE 120
Query: 121 DVYPTSDFASGMMVADDVHTKIEKRMGI 148
DVYP + + MV DDVH+KIEK++GI
Sbjct: 121 DVYPGTGLQASTMVGDDVHSKIEKQLGI 148
>SPCC14G10.03c [O] KOG3061 Proteasome maturation factor
Length = 129
Score = 68.9 bits (167), Expect = 2e-12
Identities = 33/84 (39%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Query: 43 PLNTQLNDRHPLESRVRNWDETQHKRQLEQYRQIFGVAEPMKRVMELKLVQNTDFNPL-- 100
P ++ ++HPLESR++NW+ Q + +L+ R+I+G+ EP++R ME KL + PL
Sbjct: 27 PAVHRVENKHPLESRLKNWEAQQQQIRLDSMRRIYGLHEPVRREMEQKLASQSS-RPLAL 85
Query: 101 -NQSNLHKDVLMNKEASIDWEDVY 123
+N H D+L N+EA +D D+Y
Sbjct: 86 GGSANFHLDILANREAVLDETDIY 109
>Hs7705429 [O] KOG3061 Proteasome maturation factor
Length = 141
Score = 51.2 bits (121), Expect = 5e-07
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 44 LNTQLNDRHPLESRVRNWDETQHKRQLEQYRQIFGVAEPMKRVMELKLVQNTDFNP-LNQ 102
+ +L HPLE +N+ Q K R I G+ P+K ME K VQ P L+
Sbjct: 38 VKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQQVQRLPFLSS 97
Query: 103 SNLHKDVLMNKEASIDWEDVYPTSDFASGMMVADDVHTKIEKRMGI 148
SNL DVL + +I +ED+ + S V + H +E ++G+
Sbjct: 98 SNLSLDVLRGNDETIGFEDIL---NDPSQSEVMGEPHLMVEYKLGL 140
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.316 0.131 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,738,595
Number of Sequences: 60738
Number of extensions: 328915
Number of successful extensions: 873
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 867
Number of HSP's gapped (non-prelim): 3
length of query: 148
length of database: 30,389,216
effective HSP length: 96
effective length of query: 52
effective length of database: 24,558,368
effective search space: 1277035136
effective search space used: 1277035136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)