ORF STATUS Function Best COG Functional category Pathways and functional systems
r_klactV6359 suspect: HSP R KOG1862 General function prediction only GYF domain containing proteins
Only best alignment is shown:
BLASTP 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= r_klactV6359 2178343 2180721 793
(793 letters)
Database: KOG eukaryal database 04/03
60,738 sequences; 30,389,216 total letters
Searching..................................................done
Color Key for Alignment Scores: 
Score E
Sequences producing significant alignments: (bits) Value
YPL105c [R] KOG1862 GYF domain containing proteins 180 7e-45
YBR172c [R] KOG1862 GYF domain containing proteins 152 1e-36
SPAC4F10.13c [R] KOG1862 GYF domain containing proteins 76 2e-13
>YPL105c [R] KOG1862 GYF domain containing proteins
Length = 849
Score = 180 bits (457), Expect = 7e-45
Identities = 95/165 (57%), Positives = 124/165 (74%), Gaps = 3/165 (1%)
Query: 630 AKKKTSLDSPRPAPQINNSFLNPGNTKKKILHGSSISIPTLK-KGVTSSPIN-YSGNQST 687
+K SLD+ R + ++ + + K K + GSS SIPTLK + V S I Y GN S
Sbjct: 685 SKSYISLDTLRSSGGLSTATKTKMSDKSKQI-GSSTSIPTLKARQVKPSRIPAYPGNASV 743
Query: 688 SARRQFLSWCRSQMKLAPGVKVDSVLEMLLSLPPSMDSKEIISDTIYANSSVMEGRSFAS 747
S R++FL WCRSQ+KL GV+ D+VLEMLLSLPP +SKEII+DTIY+ SS M+GR FA+
Sbjct: 744 SKRQEFLRWCRSQLKLNTGVQPDNVLEMLLSLPPGSESKEIIADTIYSYSSTMDGRRFAT 803
Query: 748 EFIKRRIECEKSLNDPLTWSEALALPQGSADDWEFQVVSKKKGKR 792
+FIK+R+ECE+ +NDPL+WSE LA+P+GS++DWEFQVV KKKGKR
Sbjct: 804 DFIKKRLECEEEINDPLSWSEVLAMPEGSSEDWEFQVVGKKKGKR 848
Score = 86.7 bits (213), Expect = 1e-16
Identities = 110/483 (22%), Positives = 173/483 (35%), Gaps = 119/483 (24%)
Query: 12 ISTVNSVNSQLQDFGIGSTIGSANPISGSSTP-LGGVPQIHRSVSLMDTLGIQRTQSPFH 70
++ +NS+ L + +S S+TP + + R S+MD++G+QR SPF
Sbjct: 1 MNPINSLAFDLHSVKLADANSDTAALSNSNTPTMNNAALLQRPSSIMDSIGVQRVPSPF- 59
Query: 71 NAPGNDSPSIFSQ---------------QTSIHWNMNSGINTGGGEIPFXXXXXXXXXXX 115
PG+++ S S Q S + NS + +
Sbjct: 60 -VPGSNAISGASTVPFNAYDAEITGSPLQISANQENNSAFSAASSNLHMNASSPSVLNKP 118
Query: 116 XXXXXDIHTPISRPPGIITNVQ--------QTSWQYLDHSNQVQGPFDSEIMDQWYNAGF 167
++ + G NV ++ W+Y+D + +QGPF + M QWY G+
Sbjct: 119 SSTFPNVAPYLYNATGPAPNVGNQPPPPGIESQWKYIDSNGNIQGPFGTNNMSQWYQGGY 178
Query: 168 FNESLHLMPM-NSDDPFHFSGRFIMFNDLLSKTGIIN----PFHAFDMICFXXXXXXXXX 222
F +L + + S +PF + RFI +L T ++N PF AFD I
Sbjct: 179 FTPTLQICRLATSPEPFGVNDRFIRLGEL---TTLVNNYQDPFVAFDFIVIRALNAV--- 232
Query: 223 XXXXXXXFGQKGSSTSLMQQHVLGQSQAHPANLSQRQPKPFDLPAXXXXXXXXXXXPVPV 282
P P +PV
Sbjct: 233 ---------------------------------------PLVAPTSSEKQKVESRDLIPV 253
Query: 283 LQNMISKGLHFDNNTYANIDRNFQSPDLSHSQILQLKNEDGSYYQNTTVSVPF-SKHVQA 341
+H D+ TY I L LK EDGSYY T V VP +H+
Sbjct: 254 AD------VHSDDFTYEEI--------------LGLKFEDGSYYHETQVWVPVDGRHITK 293
Query: 342 VD------SFELPL---ESVSDKSTGSFAAKSDTYQLAPQTYQ--------TTQPIRSVD 384
VD ++ PL S S+K+T S K +++ A Q T I + +
Sbjct: 294 VDRIPKISAYTAPLSTTSSRSNKTTSSHEEKVPSHEEASPEEQEVFSEEGRTVSNITNEE 353
Query: 385 ATSIKDQYQPTNAQTEASNS-TANDILQQNIP-AKEPSTDPTTNSVSVEKSKEAPVKAKT 442
+ +K+ PT + E+ S +IL Q P +E ++ KSK+ P
Sbjct: 354 ESIVKN---PTKQEEESRGSEKEQNILDQVQPEIEEVDRKDVISTADEPKSKDTPQMTSE 410
Query: 443 EKK 445
E+K
Sbjct: 411 EQK 413
>YBR172c [R] KOG1862 GYF domain containing proteins
Length = 790
Score = 152 bits (385), Expect = 1e-36
Identities = 88/246 (35%), Positives = 133/246 (53%), Gaps = 11/246 (4%)
Query: 553 AEEQKTKFNVSSVASWANPVGTKAPAKAPVKTTSRSTPEPSADS-----IKYXXXXXXXX 607
++E+K K + SV +WAN + +K+ + +P+ +S ++
Sbjct: 551 SKEEKQKEELKSVLNWANKSSLPSNQTIDIKSQFQKSPKGMKESSPLKELEDPNFIEEQK 610
Query: 608 XXXXNXXXXXXXXXXXXXXXTIAKKKTSLDSPRPAPQINNSFLNPGNTKKKILHGSSISI 667
T T++ S AP + ++P + L+ S
Sbjct: 611 KLWEKVQSSSKQVKSTSSASTTTSSWTTVTSKGKAPI--GTVVSPYSKTNTSLNSSL--- 665
Query: 668 PTLKKGVTSSPINYSGNQSTSARRQFLSWCRSQMKLAPGVKVDSVLEMLLSLPPSMDSKE 727
T K TS+ ++ + S R++F+ WC+SQMKL G+ ++VLE+LLSLP +SKE
Sbjct: 666 -TAKTSTTSTTTTFASMNNVSPRQEFIKWCKSQMKLNSGITNNNVLELLLSLPTGPESKE 724
Query: 728 IISDTIYANSSVMEGRSFASEFIKRRIECEKSLNDPLTWSEALALPQGSADDWEFQVVSK 787
+I +TIYANS VM+GR FA+EFIKRR+ CEK +DPL+W+EALAL D WEFQVVSK
Sbjct: 725 LIQETIYANSDVMDGRRFATEFIKRRVACEKQGDDPLSWNEALALSGNDDDGWEFQVVSK 784
Query: 788 KKGKRN 793
KKG+++
Sbjct: 785 KKGRKH 790
Score = 67.4 bits (163), Expect = 8e-11
Identities = 56/230 (24%), Positives = 95/230 (40%), Gaps = 46/230 (20%)
Query: 28 GSTIGSANPISGSS----TPL-GGVPQIHRSVSLMDTLGIQRTQSPFHNAPGNDSPSIFS 82
G+ S N + GS+ TPL GG + R+ SL+D++GIQR SPF + P
Sbjct: 102 GAVAASVNTVPGSTFRSNTPLLGGRHPLSRTSSLIDSIGIQRAASPFSSMKEPFIPQSSG 161
Query: 83 QQTSIHWNMN---SGINTGGGEIPFXXXXXXXXXXXXXXXXDIH----------TPISRP 129
+S W+ + S ++T + P ++ TP+S P
Sbjct: 162 VMSSSFWHGDHPESRVSTPVQQHPLLQRNESSSSFSYAANLGVNLSTHSLAVDITPLSTP 221
Query: 130 PGIITNVQ-------------------------QTSWQYLDHSNQVQGPFDSEIMDQWYN 164
++V ++SW+Y+D Q+ GPF +++M QWY
Sbjct: 222 TAAQSHVNLFPSSDIPPNMSMNGMSQLPAPVSVESSWRYIDTQGQIHGPFTTQMMSQWYI 281
Query: 165 AGFFNESLHLMPMNS-DDPFHFSGRFIMFNDLLSKTG--IINPFHAFDMI 211
G+F +L + + S + + FI +L++K +PF FD +
Sbjct: 282 GGYFASTLQISRLGSTPETLGINDIFITLGELMTKLEKYDTDPFTTFDKL 331
>SPAC4F10.13c [R] KOG1862 GYF domain containing proteins
Length = 992
Score = 75.9 bits (185), Expect = 2e-13
Identities = 62/178 (34%), Positives = 92/178 (50%), Gaps = 36/178 (20%)
Query: 648 SFLNPGNTKKKILHGSSISIP--TLKKGVTSSPINYSGNQ-STSARRQ-----------F 693
S + PG KI++ S S T S+ +N +Q STS++ Q F
Sbjct: 816 SVVGPGG---KIVNQQSPSAQQTTRSPSKVSATLNAGNSQASTSSKLQQVVSMSGHSPDF 872
Query: 694 LSWCRSQMK-LAPGVKVDSVLEMLLSLPP--SMDSKEIISDTIYANSSVMEGRSFASEFI 750
L+WC+ +K L GV + L+MLLSLP ++++ EIISD+IYANS++M+GR FASEF
Sbjct: 873 LAWCKISLKGLNEGVNYEEFLDMLLSLPAENNVETFEIISDSIYANSTIMDGRRFASEFT 932
Query: 751 KRRI-------------ECEKSL-NDPLTWSEALALPQGSADDWE--FQVVSKKKGKR 792
+RRI + + L N WS+ + +W F+VV+ KK K+
Sbjct: 933 RRRIADLTGKDGQQSNNKSQSELGNSSGAWSQVVRNKPKQGTEWNSAFKVVTSKKNKK 990
Database: KOG eukaryal database 04/03
Posted date: Apr 14, 2003 1:07 PM
Number of letters in database: 30,389,216
Number of sequences in database: 60,738
Lambda K H
0.310 0.126 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,327,705
Number of Sequences: 60738
Number of extensions: 1620589
Number of successful extensions: 4201
Number of sequences better than 1.0e-05: 3
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4190
Number of HSP's gapped (non-prelim): 10
length of query: 793
length of database: 30,389,216
effective HSP length: 114
effective length of query: 679
effective length of database: 23,465,084
effective search space: 15932792036
effective search space used: 15932792036
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)